BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036303
         (605 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 453/586 (77%), Gaps = 10/586 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +VL  AKLY  ARCL++D+ + L  SR+   +C SVFN L+ LE  KF P+VF  LII
Sbjct: 76  IIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR-ICCSVFNVLSRLESSKFTPNVFGVLII 134

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           AFSEMG +EEALWVY K++VLPA+QACN +L+GL+KKG+FD++W+ Y +MV  G   +VV
Sbjct: 135 AFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV 194

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TYG LID CC QGD +KA  LFDEMI+K I PTVVIYTILI GLC E+++ EAESMFR+M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R  G++PNLYTYN +MDGYCK+A V +ALE Y EML   L PNVVTFG+L+DGLCK  E+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A  F + MA FGV PNIFVYNCLIDG+CKAGNL EA+SL SE+EK EI PDVFTY+IL
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           IKGLCGV ++E A+GLLQ+M K+G L N VTYN+LIDGYCKEG+MEKA+ VCSQMTEKG+
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPN++TFS+LIDG CKAG ++AAMGLYTEMVIK L+PDVV +TALIDG  KDGN KE  R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL---------EKTDKTDGGYCSP 471
           L+KEM EA + P+VFT+S LI GL K+GRIS+A+  FL          KT++ D   CSP
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           NHV+Y A+IQ LC DG+I KASK FSDMR   LRPD  T   +++G  RA  + DVMML 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           AD++KMGI+P++ + +V+ +GY+E+G LKSA RCSE L    IG S
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCS 660


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/597 (61%), Positives = 457/597 (76%), Gaps = 12/597 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +VL  AKLY  ARCL++D+ + L KSR+   +C SVFN L+ LE  KF P+VF  LII
Sbjct: 76  IIHVLTGAKLYAKARCLMRDLIQCLQKSRRSR-ICCSVFNVLSRLESSKFTPNVFGVLII 134

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           AFSEMG +EEALWVY K++VLPA+QACN +L+GL+KKG+FD++W+ Y +MV  G   +VV
Sbjct: 135 AFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV 194

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TYG LID CC QGD +KA  LFDEMI+K I PTVVIYTILI GLC E+++ EAESMFR+M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R  G++PNLYTYN +MDGYCK+A V +ALE Y EML   L PNVVTFG+L+DGLCK  E+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A  F + MA FGV PNIFVYNCLIDG+CKAGNL EA+SL SE+EK EI PDVFTY+IL
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           IKGLCGV ++E A+GLLQ+M K+G L N VTYN+LIDGYCKEG+MEKA+ VCSQMTEKG+
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPN++TFS+LIDG CKAG ++AAMGLYTEMVIK L+PDVV +TALIDG  KDGN KE  R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL---------EKTDKTDGGYCSP 471
           L+KEM EA + P+VFT+S LI GL K+GRIS+A+  FL          KT++ D   CSP
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           NHV+Y A+IQ LC DG+I KASK FSDMR   LRPD  T   +++G  RA  + DVMML 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE-SRIGSSETEGHTTRS 586
           AD++KMGI+P++ + +V+ +GY+E+G LKSA   C E ++   R+ S     +T RS
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRS 671



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 247/556 (44%), Gaps = 56/556 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + + G++E+A+ V  ++    + P I   + L++G  K GK ++    Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV+ GL+ DVV Y  LID     G+  +A  L  EM + G+ P V   + LI GLC +
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 168 NKMVEAESMFRSMRECGVV-------------PNLYTYNALMDGYCKVADVNRALEFYHE 214
            ++ +A  +F +                    PN   Y AL+ G C    + +A +F+ +
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    L+P+V T  V++ G  +   LR        + K G+ PN  VY  L  G+ ++G 
Sbjct: 582 MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGY 641

Query: 275 LFEAMSLCSE----MEKFEISPDVFTYNILIK-GLCGVGQLE----------GAEGLLQK 319
           L  A+S C E    +++    P   +Y I  +  LC V + +          G    +  
Sbjct: 642 LKSALSFCGEGVQPLDRVNSEP-WGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLL 700

Query: 320 MYKEGILANVVTYNSL--IDGYCKEGDME--KALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            Y   IL     +  L  +    ++GD    KAL +  QM     +P++VT +  +    
Sbjct: 701 WYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACA 760

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
             G +D    ++  +  + L  D+ +  +LI+  SK G +    RL+    +  +T    
Sbjct: 761 DLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVT---- 816

Query: 436 TVSSLIHGLFKNGRISNALNFFLE--------KTDKTDGGYCS----PNHVLYAAIIQAL 483
           T +S+I G   +G+   AL  F E        + +K +G   S    PN V +  ++ A 
Sbjct: 817 TWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMAC 876

Query: 484 CYDGQILKASKLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            + G + +  + F  M+ D +LRP    +  M+  L RA  + +    +   +KM + P+
Sbjct: 877 SHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI---LKMPVRPN 933

Query: 543 AVINQVMVRGYQENGD 558
           AV+ + ++      GD
Sbjct: 934 AVVWRTLLGACSLQGD 949


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/584 (55%), Positives = 421/584 (72%), Gaps = 11/584 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +VL  +KL  +AR L+ D+ +NL+KS KP+H C   F+ L+ L+  KF P+V+  LII
Sbjct: 64  IIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELII 123

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
              +M  +EEAL +Y K+     IQACN LL  L+K G+F+ +W  YEEM+  GL   V+
Sbjct: 124 VLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T+G LID CC QGD+++A  +FDEM  KGI PTV++YTILI GLC++NK+ EAESM R+M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           RE GV PN+YTYN LMDGYCK+A+  +AL  Y +ML   L P+VVTFG+L+DGLCK GE+
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
           +AA N FV+M KF V PNI VYN LID +CK G++ EAM+L  E+E+FE+SPDVFTY+IL
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I+GLC V + E A  + +KM KEGILAN VTYNSLIDG CKEG M+KAL +CSQMTE GV
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPNV+TFS+LIDG CK  N+ AAMG+Y+EMVIKSL PDVV +TA+IDG  K G+MKE L+
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD------KTDGGYCSP--- 471
           LY +ML+  ITP+ +T+S L+ GL K+G+IS+AL  F EK +        D G   P   
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           NHV Y A+I  LC DGQ  KA KLFSDMR   L+PD   Y  MLRGL + K +L  MML 
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYIL--MMLH 601

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
           ADM+K G++P++ ++ ++   YQE+G LKSA  CS+ L+E+  G
Sbjct: 602 ADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEENLHG 645


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/467 (65%), Positives = 372/467 (79%), Gaps = 1/467 (0%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +VL  AKLY  ARCL++D+ + L  SR+   +C SVFN L+ LE  KF P+VF  LII
Sbjct: 76  IIHVLTGAKLYAKARCLMRDLIQCLQNSRR-SRICCSVFNVLSRLESSKFTPNVFGVLII 134

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           AFSEMG +EEALWVY K++VLPA+QACN +L+GL+KKG+FD++W+ Y +MV  G   +VV
Sbjct: 135 AFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV 194

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TYG LID CC QGD +KA  LFDEMI+K I PTVVIYTILI GLC E+++ EAESMFR+M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R  G++PNLYTYN +MDGYCK+A V +ALE Y EML   L PNVVTFG+L+DGLCK  E+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A  F + MA FGV PNIFVYNCLIDG+CKAGNL EA+SL SE+EK EI PDVFTY+IL
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           IKGLCGV ++E A+GLLQ+M K+G L N VTYN+LIDGYCKEG+MEKA+ VCSQMTEKG+
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPN++TFS+LIDG CKAG ++AAMGLYTEMVIK L+PDVV +TALIDG  KDGN KE  R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           L+KEM EA + P+VFT+S LI GL K+GRIS+A+  FL KT     G
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTG 541



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 232/460 (50%), Gaps = 33/460 (7%)

Query: 137 KALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMREC------------ 183
           +AL LF  +  +  +     +Y+ +IH L       +A  + R + +C            
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 184 -----------GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
                         PN++    L+  + ++  V  AL  Y++M   ++ P +    +++D
Sbjct: 112 VFNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLD 166

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GL K G        +  M   G  PN+  Y  LIDG C+ G+  +A  L  EM + +I P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
            V  Y ILI+GLCG  ++  AE + + M   G+L N+ TYN+++DGYCK   ++KAL + 
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M   G+ PNVVTF  LIDG CK   + +A     +M    +VP++ V+  LIDG  K 
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           GN+ E L L+ E+ + +I P VFT S LI GL    R+  A     E   K   G+  PN
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK---GFL-PN 402

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I   C +G + KA ++ S M    + P+  T++T++ G  +A +M   M L  
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +M+  G++PD V    ++ G+ ++G+ K AFR  + ++E+
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 194/380 (51%), Gaps = 4/380 (1%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V+P +   N ++DG  K    +   + Y +M+     PNVVT+G L+DG C+ G+   A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M +  +FP + +Y  LI G C    + EA S+   M    + P+++TYN ++ G 
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C +  ++ A  L Q+M  +G+L NVVT+  LIDG CK  +M  A      M   GV PN+
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             ++ LIDG CKAGN+  A+ L++E+    ++PDV  ++ LI GL     M+E   L +E
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M +    P+  T ++LI G  K G +  A+    + T+K       PN + ++ +I   C
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG----IEPNIITFSTLIDGYC 449

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A  L+++M    L PD   YT ++ G  +     +   L  +M + G+ P+  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 545 INQVMVRGYQENGDLKSAFR 564
               ++ G  ++G +  A +
Sbjct: 510 TLSCLIDGLCKDGRISDAIK 529



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 124/549 (22%), Positives = 216/549 (39%), Gaps = 112/549 (20%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + + G++E+A+ V  ++    + P I   + L++G  K GK ++    Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV+ GL+ DVV Y  LID     G+  +A  L  EM + G+ P V   + LI GLC +
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 168 NKMVEA-------------------------------ESMFRSMRE-CGVV--------- 186
            ++ +A                                S+FR + E C  V         
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFAT 581

Query: 187 -----PNLYTY------NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL- 234
                 +L+T+      N  +  Y + ++ ++ L F+  +L  N  P+ +    LM  L 
Sbjct: 582 NNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKN--PSSIDSFSLMFALK 639

Query: 235 -CKV-GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            C +   L         +  FG  P IF+   LI  +   GN+ +A              
Sbjct: 640 ACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADA-------------- 685

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
                                      M+ E    N++++ S+I  Y       KAL + 
Sbjct: 686 -------------------------HNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLF 720

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            QM    V+P++VT +  +      G +D    ++  +  + L  D+ +  +LI+  SK 
Sbjct: 721 RQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKC 780

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G +  T R +  +L   +T     ++    GL + G+     +F   K D +      P 
Sbjct: 781 GEIG-TARRFSLVLPNDVTFMGVLMACSHAGLVEEGK----QHFRSMKEDYS----LRPR 831

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              +  ++  LC  G + +A +    M    +RP+   + T+L G    + M D  ML+ 
Sbjct: 832 ISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL-GACSLQGMWDKKMLVR 887

Query: 533 DMIKMGIVP 541
           + IK    P
Sbjct: 888 NQIKQRRDP 896


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/562 (52%), Positives = 383/562 (68%), Gaps = 4/562 (0%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + +VL  A  Y  ARCLIK + E L +  +P ++ + +FNAL  ++ PKF+  VFS LI+
Sbjct: 81  VIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIM 140

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
            F EMG  EEALWV R+++  P  +AC ++LNGL+++ +FDSVW  Y+ M+  GLV DV 
Sbjct: 141 EFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
            Y VL  CC  QG   K   L DEM   GI+P V IYTI I  LC +NKM EAE MF  M
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           ++ GV+PNLYTY+A++DGYCK  +V +A   Y E+L   L PNVV FG L+DG CK  EL
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A + FVHM KFGV PN++VYNCLI GHCK+GN+ EA+ L SEME   +SPDVFTY IL
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC   Q+  A  L QKM  E I  +  TYNSLI GYCKE +ME+AL +CS+MT  GV
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPN++TFS+LIDG C   +I AAMGLY EM IK +VPDVV +TALID   K+ NMKE LR
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           LY +MLEA I P+  T + L+ G +K GR+S A++F+ E   +        NHV +  +I
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW----NHVGFTCLI 556

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           + LC +G IL+AS+ FSDMRS  + PD C+Y +ML+G L+ KR+ D MML  DMIK GI+
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           P+ ++NQ++ R YQ NG +KSA
Sbjct: 617 PNLLVNQLLARFYQANGYVKSA 638



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 169/335 (50%), Gaps = 4/335 (1%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GL +     +    +  M   G+ P++ +Y  L     K G   +   L  EM    
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I P+V+ Y I I  LC   ++E AE + + M K G+L N+ TY+++IDGYCK G++ +A 
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  ++    + PNVV F +L+DG CKA  +  A  L+  MV   + P++ V+  LI G 
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K GNM E + L  EM    ++P VFT + LI+GL    +++ A   F     K      
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF----QKMKNERI 405

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+   Y ++I   C +  + +A  L S+M +  + P+  T++T++ G    + +   M 
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  +M   GIVPD V    ++  + +  ++K A R
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/566 (52%), Positives = 381/566 (67%), Gaps = 4/566 (0%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + +VL  A  Y  ARCLIK + E L +  +P ++ + +FNAL  ++ PKF+  VFS LI+
Sbjct: 115 VIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIM 174

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
            F EMG  E+ALWV R++   P  +AC A+LNGL+++ +FDSVW  Y+ M+  GLV DV 
Sbjct: 175 EFLEMGLFEDALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 234

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
            Y VL  CC  QG   K   L DEM   G++P V IYTI I  LC ENKM EAE MF  M
Sbjct: 235 IYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELM 294

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           +  GVVPNLYTY+A++DGYCK  ++ +A   Y E+L   L PNVV FG L+DG CK  EL
Sbjct: 295 KIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 354

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            AA + FVHM KFGV PN++VYNCLI G CK+GN+ EAM L SEME   +SPDVFTY IL
Sbjct: 355 VAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTIL 414

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC   +L  A  L Q+M  E I  + VTYNSLI G+CKE ++EKAL +CS+MT  GV
Sbjct: 415 INGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGV 474

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EPN++TFS+LIDG CK  NI AAMGLY EM IK +VPDVV +T LID   K+ NMKE LR
Sbjct: 475 EPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALR 534

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN----HVLY 476
           LY +MLEA I P+  T + L+ G +K GR+S+A++F+LE      G          +V +
Sbjct: 535 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGF 594

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I+ LC +G IL+AS+ FSDM+S  + PD  +Y +ML+  LR KR+ D MML  DMIK
Sbjct: 595 TCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIK 654

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            GI+P+ ++NQ++   YQENG L+SA
Sbjct: 655 TGILPNLMVNQLLAMFYQENGYLRSA 680



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 173/335 (51%), Gaps = 4/335 (1%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GL +     +    +  M   G+ P++ +Y+ L     K G   +   L  EM    
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+V+ Y I I+ LC   ++E AE + + M   G++ N+ TY+++IDGYCK G++ +A 
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  ++    + PNVV F +L+DG CKA  + AA  L+  MV   + P++ V+  LI G 
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K GNM E + L  EM    ++P VFT + LI+GL    R++ A   F     +      
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLF----QRMKNERI 439

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y ++I   C +  I KA  L S+M S  + P+  T++T++ G  + + +   M 
Sbjct: 440 FPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMG 499

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  +M   GIVPD V    ++  + +  ++K A R
Sbjct: 500 LYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALR 534


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 277/508 (54%), Positives = 353/508 (69%), Gaps = 17/508 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P +Q CNALL+GL+K   FDS+WE Y +M+       V+TYG+L++CCC QGD   A  
Sbjct: 1   MPTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQK 60

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGY 199
           +FDEM+++GIEP VVIY           +M EAE +F  MRE GVV PNLYTY  LMDGY
Sbjct: 61  VFDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGY 110

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
             + DV R    Y +ML   L P+VVTF  L+D L K+G+L+AA N F +MAKF V PN 
Sbjct: 111 SMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNG 170

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LI G+CKAG+L EAM L  EME+  I  DV TYNILIKGLC + +LE A GL++K
Sbjct: 171 HAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEK 230

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M +  + AN V +N +IDG CK GDMEKA+ VCSQMTE+ +EPNV+TFS LIDG C  GN
Sbjct: 231 MDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGN 290

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           + AAMGLYTEMVIK +VPDVV +TALIDG  K GN KE  RL+KEML+A ++P++FTVS 
Sbjct: 291 VRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSC 350

Query: 440 LIHGLFKNGRISNALNFFLEKT------DKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +I GL K+GR ++A+  FLEKT      DK D  +CSPN ++YA +IQ LC DG I KA+
Sbjct: 351 VIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKAT 410

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K F++M+ +  +PD   Y TML+   ++K M+DVMML ADM+KMG++ +  I +V+ RGY
Sbjct: 411 KFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGY 470

Query: 554 QENGDLKSAFRCSEFLKESRIGSSETEG 581
           +ENG LKSA  CSE+L E  I   E  G
Sbjct: 471 RENGYLKSALMCSEYLMEYGIHFPECRG 498



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 11/407 (2%)

Query: 59  IIAFSEMGHIEEALWVYRKIEVL-PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           ++ + +MG  E      R+  V+ P +     L++G    G    V+  Y +M+  GL  
Sbjct: 74  VVIYGQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYP 133

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DVVT+  LID     GD+  A N F  M    + P    Y  LIHG C    ++EA  + 
Sbjct: 134 DVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLR 193

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M  CG+  ++ TYN L+ G C +  +  A+    +M    +  N V F V++DG CK+
Sbjct: 194 LEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKI 253

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A      M +  + PN+  ++ LIDG C  GN+  AM L +EM    I PDV TY
Sbjct: 254 GDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTY 313

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI G C VG  + A  L ++M   G+  N+ T + +IDG  K+G    A+ +  + T 
Sbjct: 314 TALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTG 373

Query: 358 KG----------VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            G            PN + ++ LI G C+ G I  A   + EM      PD++V+  ++ 
Sbjct: 374 AGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQ 433

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
              +  +M + + L+ +M++  +  + F    L  G  +NG + +AL
Sbjct: 434 AHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSAL 480


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/434 (54%), Positives = 301/434 (69%), Gaps = 6/434 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + + L  AK+Y  ARCL KD+ + LL+S  P  V   VFNAL+ L   KFNPSVF  LII
Sbjct: 68  VIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLII 127

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           AFSE+G ++EAL VY K+   PA+QACNALLNGL+KK  FD +WE Y  MV   L   VV
Sbjct: 128 AFSEVGLVDEALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVV 187

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY VL+D CC QGDV++A +L  EM+ KGIEPTVVIYT LIHGLC+E+K++EAESMFR M
Sbjct: 188 TYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQM 247

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           ++ GV PNLYTYN LMDGYCK A+V +AL  Y  ML   LQPNVVTFG+L+D LCKV EL
Sbjct: 248 KDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVREL 307

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            AA  FFV MAKFGV PN+ V+N LIDG+ KAGN  EA  L  EMEKF+ISPDVFTY+IL
Sbjct: 308 LAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSIL 367

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV------CSQ 354
           IK  C +G +E A+ +L++M KEG+ AN V YNSLIDGYCKEG+MEKAL +       S 
Sbjct: 368 IKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSD 427

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G+ P+ + ++ ++ G   A ++   M L+ +M+   +VP+ V    +  G   +G 
Sbjct: 428 MRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGY 487

Query: 415 MKETLRLYKEMLEA 428
           +K  L   +++ E+
Sbjct: 488 LKSALWCSRDLTES 501



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 163/391 (41%), Positives = 219/391 (56%), Gaps = 13/391 (3%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N   +  L+  + +V  V+ AL  Y   L     P V     L++GL K          +
Sbjct: 118 NPSVFGVLIIAFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFDIMWELY 174

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
            +M    +FP +  YN L+D  C+ G++  A SL SEM K  I P V  Y  LI GLC  
Sbjct: 175 NNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSE 234

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
            +L  AE + ++M   G+  N+ TYN L+DGYCK  ++++AL +   M + G++PNVVTF
Sbjct: 235 SKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTF 294

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             LID  CK   + AA   + +M    +VP+VVVF +LIDG SK GN  E   L  EM +
Sbjct: 295 GILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEK 354

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            KI+P VFT S LI    + G +  A +  L++ +K        N V+Y ++I   C +G
Sbjct: 355 FKISPDVFTYSILIKNACRLGTVEEA-DDILKRMEKEG---VPANSVVYNSLIDGYCKEG 410

Query: 488 ------QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                 +I KA+K FSDMR + LRPD   Y  ML+G L AK M DVMML ADMIKMGIVP
Sbjct: 411 NMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVP 470

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           + V +QV+ RGYQ+NG LKSA  CS  L ES
Sbjct: 471 NEVTSQVVRRGYQDNGYLKSALWCSRDLTES 501



 Score = 38.9 bits (89), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           +K  PSVF V  LI    + G +  AL  +L+         C+       A++  L    
Sbjct: 115 SKFNPSVFGV--LIIAFSEVGLVDEALRVYLKVGAFPAVQACN-------ALLNGLLKKS 165

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
                 +L+++M S  L P   TY  ++    R   +L    L+++M+K GI P  VI  
Sbjct: 166 SFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYT 225

Query: 548 VMVRGYQENGDLKSAFRCSEFLKES 572
            ++ G      L  A      +K+S
Sbjct: 226 TLIHGLCSESKLMEAESMFRQMKDS 250


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/504 (44%), Positives = 318/504 (63%), Gaps = 21/504 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
              L+IA S+MG ++EAL+V+R++  LPA+ ACNA+L+GL+K  +    WE ++EM+  G
Sbjct: 122 LGVLVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           LV  VVTY  LI+ C  QG V KA  ++D+M+ + I+P VV YT +I  LC E  + +AE
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +F +M+E G+ PN YTYN LM G+C+  DVN A+  Y E+L   L PN V F  L+DG 
Sbjct: 242 RLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK      A   F+ M +FGV P + VYN L+DG  ++GN  EA++L  EM +  + PD 
Sbjct: 302 CKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDE 361

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           FT +I+++GLC  GQ+  A+  LQ + ++G+  N   YN+LID YC+ G++E+AL+ C++
Sbjct: 362 FTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTR 421

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MTE G+EPNVV++SSLIDG  K G +  AM +YTEMV K + P+VV +TALI G +K+G 
Sbjct: 422 MTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 481

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS---- 470
           +    RL+KEM+E  I+P+  TVS L+ GL +  R+  A+ F +E +    G  CS    
Sbjct: 482 IDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYS----GLKCSDIHS 537

Query: 471 -------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                        PN V+Y  +I  L  DGQ  +A KLFS MR   + PD+ TYT ++RG
Sbjct: 538 VFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597

Query: 518 LLRAKRMLDVMMLLADMIKMGIVP 541
                 +L+ MML ADM+K+G+ P
Sbjct: 598 QCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 180/353 (50%), Gaps = 4/353 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +     ++DGL K      A   F  M + G+ P++  YN LI+     G + +A  +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M   +I P+V TY  +I  LC  G +  AE L   M + G+  N  TYN L+ G+C+
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
             D+  A+ +  ++ + G+ PN V F++LIDG CKA     A G++ EM    + P V V
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + +L+DG  + GN +E L LY+EM    + P  FT S ++ GL   G++  A  F   + 
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFL--QG 386

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            + DG   + N   Y A+I   C  G + +A    + M    + P+  +Y++++ G  + 
Sbjct: 387 VQEDG--VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKR 444

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M   M +  +M+  GI P+ V    ++ G+ +NG + +AFR  + + E+ I
Sbjct: 445 GKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGI 497



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 22/236 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N + ++ LI  +  +G++EEAL    +   + + P + + ++L++G  K+GK       
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAI 453

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EMV  G+  +VVTY  LI      G +  A  L  EMI+ GI P  +  ++L+ GLC 
Sbjct: 454 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCR 513

Query: 167 ENKMVEA---------------ESMFRSM---RECGVVPNLYTYNALMDGYCKVADVNRA 208
           EN++ EA                S+F +     EC ++PN   Y  L+ G         A
Sbjct: 514 ENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC-LIPNSVIYMTLIYGLYLDGQHCEA 572

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            + +  M    + P+  T+ +L+ G C +G +  A   +  M K GV P  +   C
Sbjct: 573 GKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRYKIEC 628



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 17/214 (7%)

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+    + G +D A  LY    +++L P +    A++DGL K         L+ EML   
Sbjct: 125 LVIALSQMGLLDEA--LYVFRRLRTL-PALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           + PSV T ++LI+     G ++ A   +    D+       PN V Y  +I ALC +G I
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVW----DQMVAQQIDPNVVTYTTMICALCEEGCI 237

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +LF  M+   ++P+  TY  ++ G  +   +   ++L  +++K G+ P+AVI   +
Sbjct: 238 GDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTL 297

Query: 550 VRGYQENGDLKSAFRCSE----FLKESRIGSSET 579
           + G+ +      A R SE    FL+  R G + T
Sbjct: 298 IDGFCK------AKRFSEAKGMFLEMPRFGVAPT 325


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/497 (43%), Positives = 315/497 (63%), Gaps = 13/497 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+IA S+MG ++EAL+V+R++  LPA+ ACNA+L+GL+K  +    WE ++EM+  G+V 
Sbjct: 117 LVIALSQMGLLDEALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP 176

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            VVTY  LI+ C  QG V KA  ++D+M+ + I+P V+ YT +I  LC E  + +AE +F
Sbjct: 177 SVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLF 236

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            +M+E G+ PN YTYN LM G+C+  DVN A   Y E+L+  L PN V F  L+DG CK 
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKA 296

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
                A + F  M +FGV P + VYN L+DG  ++G+  EA+SL  EM +  + PD FT 
Sbjct: 297 KRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTC 356

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +I+++GLC  GQ++ A   L+ + ++G+  N   YN+LID YC+ G++E+AL+ C++MTE
Sbjct: 357 SIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTE 416

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            GVEPNVV++SSLIDG  K G +  AM +YTEMV K + P+VV +TALI G +K+G +  
Sbjct: 417 VGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 476

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD-------------KT 464
             R +KEM+E  I+P+  TVS L+ GL +  R+ +A+ F +E +               T
Sbjct: 477 AFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTT 536

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +     PN  +Y  +I  L  DGQ  +A KLFS MR   +  D+ TYT ++RG      +
Sbjct: 537 EEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYV 596

Query: 525 LDVMMLLADMIKMGIVP 541
           L+ MML ADM+K+G+ P
Sbjct: 597 LNAMMLYADMMKIGVKP 613



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 4/353 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +     ++DGL K    R A   F  M + G+ P++  YN LI+     G + +A  +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M   +I P+V TY  +I  LC  G +  AE L   M + G+  N  TYN L+ G+C+
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
             D+  A  +  ++   G+ PN V F++LIDG CKA     A  ++ +M    + P V V
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + +L+DG  + G+ +E L LY+EM    + P  FT S ++ GL   G+I  A  F LE  
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARF-LEGV 379

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            + DG   + N   Y A+I   C +G + +A    + M    + P+  +Y++++ G  + 
Sbjct: 380 -REDG--VNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKL 436

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M   M +  +M+  GI P+ V    ++ G+ +NG + +AFR  + + E+ I
Sbjct: 437 GKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGI 489



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 139/273 (50%), Gaps = 7/273 (2%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+  L  +G L+ A  + ++++    L  +   N+++DG  K      A  +  +M  +
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLRR 172

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+VVT+++LI+     G +  A  ++ +MV + + P+V+ +T++I  L ++G + + 
Sbjct: 173 GMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDA 232

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL+  M EA + P+ +T + L+ G  +   +++A   + E  +        PN V++  
Sbjct: 233 ERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSG----LIPNAVVFTT 288

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I   C   +  +A  +F DM    + P    Y +++ G  R+    + + L  +M ++G
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLG 348

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + PD     ++VRG  + G ++ A R  E ++E
Sbjct: 349 LCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE 381



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 20/228 (8%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N + ++ LI  +   G++EEAL    +   + V P + + ++L++G  K GK       
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAI 445

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EMV  G+  +VVTY  LI      G +  A     EMI+ GI P  +  ++L+ GLC 
Sbjct: 446 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505

Query: 167 ENKMVEA---------------ESMFR--SMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           EN++ +A                S F   +  E  ++PN   Y  L+ G         A 
Sbjct: 506 ENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAG 565

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           + +  M    +  +  T+ +L+ G C +G +  A   +  M K GV P
Sbjct: 566 KLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/486 (44%), Positives = 308/486 (63%), Gaps = 2/486 (0%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+IA S+M   +EAL V+ ++  LPA+ ACNA+L+GL+K      VWE ++EM+  G+V 
Sbjct: 112 LVIALSQMALPDEALSVFGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVP 171

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            VVTY  LI+ C  QGDV KA  ++D+M+ + I+P VV YT +I+ LC E+ + +AE +F
Sbjct: 172 SVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLF 231

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+E G+ PNLYTYNALM  + K  ++  AL FY+++L   L PN V F  L+DGLCK 
Sbjct: 232 LEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKA 291

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A N F+ M ++ V P + VYN LI G  ++G   EA++   E+ + E+ PD FT 
Sbjct: 292 NRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTC 351

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +I+++GLC  GQ++ A   L+ M + GI  N   YN LID YCK G++++AL  C++M+E
Sbjct: 352 SIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            GVEPNVVT+SSLIDG  K G ++ AM +YTEMV K + P+VV +TALI G +K+G+M  
Sbjct: 412 VGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 471

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT--DKTDGGYCSPNHVL 475
              L KEM E  I  +  TVS L+ GL +  R+ +A+ F +E +   K++      N V 
Sbjct: 472 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVT 531

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I  L  DGQ  +A   FS MR   + PD  TYT ++RGL     +L+ MML ADM+
Sbjct: 532 YMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMV 591

Query: 536 KMGIVP 541
           K+G+ P
Sbjct: 592 KVGVKP 597



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 178/356 (50%), Gaps = 4/356 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +     ++DGL K   L      F  M   G+ P++  YN LI+     G++ +A  +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    I P+V TY  +I  LC    +  AEGL  +M + G+  N+ TYN+L+  + K
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
             +++ AL     + + G+ PN V F++LIDG CKA  I  A  ++ +M    + P V V
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + +LI G  + G  +E L  ++E++  ++ P  FT S ++ GL   G++  A  F LE  
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRF-LEVM 374

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            ++     + N   Y  +I   C  G + +A    + M    + P+  TY++++ G  + 
Sbjct: 375 QQSG---IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKN 431

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             M   M +  +M+  G+ P+ V    ++ G+ +NGD+ +AF   + ++E  I S+
Sbjct: 432 GEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSN 487



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+ GL   G+++    F+  M   G+V D  TY ++I   C  G V+ A+ L+ +M+  G
Sbjct: 535 LIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594

Query: 150 IEPT 153
           ++PT
Sbjct: 595 VKPT 598


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/489 (43%), Positives = 306/489 (62%), Gaps = 2/489 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
              L+IA S+M   +EAL V+ ++  LPA+ ACNA+L+GL+K      VWE ++EM+  G
Sbjct: 109 LGVLVIALSQMALPDEALSVFGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRG 168

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +V  VVTY  LI+ C  QGDV KA  ++D+M+ + I+P VV YT +I  LC E+ + +AE
Sbjct: 169 MVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAE 228

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +F  M+E G+ PNLYTYNALM  + K  ++  AL FY+++L   L PN V F  L+DGL
Sbjct: 229 GLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGL 288

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+   +  A N F+ M ++ V P + VYN LI G  ++G   EA++   E+ +  + PD 
Sbjct: 289 CQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDE 348

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           FT +I+++GLC  GQ++ A   L+ M + GI  N   YN LID YCK G++++AL  C++
Sbjct: 349 FTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTR 408

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M+E GVEPNVVT+SSLIDG  K G ++ AM +YTEMV K + P+VV +TALI G +K+G+
Sbjct: 409 MSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGD 468

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT--DKTDGGYCSPN 472
           M     L KEM E  I  +  TVS L+ GL +  R+ +A+ F +E +   K++      N
Sbjct: 469 MDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIAN 528

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I  L  DGQ  +A   FS MR   + PD  TYT ++RGL     +L+ MML A
Sbjct: 529 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 588

Query: 533 DMIKMGIVP 541
           DM+K+G+ P
Sbjct: 589 DMVKVGVKP 597



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 4/356 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +     ++DGL K   L      F  M   G+ P++  YN LI+     G++ +A  +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    I P+V TY  +I  LC    +  AEGL  +M + G+  N+ TYN+L+  + K
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
             +++ AL     + + G+ PN V F++LIDG C+A  I  A  ++ +M    + P V V
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + +LI G  + G  +E L  ++E++   + P  FT S ++ GL   G++  A  F LE  
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRF-LEVM 374

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            ++     + N   Y  +I   C  G + +A    + M    + P+  TY++++ G  + 
Sbjct: 375 QQSG---IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKN 431

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             M   M +  +M+  G+ P+ V    ++ G+ +NGD+ +AF   + ++E  I S+
Sbjct: 432 GEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSN 487



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+ GL   G+++    F+  M   G+V D  TY ++I   C  G V+ A+ L+ +M+  G
Sbjct: 535 LIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594

Query: 150 IEPT 153
           ++PT
Sbjct: 595 VKPT 598


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/498 (40%), Positives = 311/498 (62%), Gaps = 14/498 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+IA S+MG  ++AL V+ ++  LPA+ ACNA+L+GL+K  +FD VW+ ++EM+  G+V 
Sbjct: 99  LVIALSQMGLHDDALSVFCRLPTLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVP 158

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            +VTY  L++ C  +GD+ KA  ++++M+ + I+P VV Y+ +I  LC E  ++EAE +F
Sbjct: 159 SLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLF 218

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+E GV PNLYTYNALM  +CK   VNR L  Y E+L   L PN V    L+ G    
Sbjct: 219 IMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLA 278

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +    N F+ M ++G+ P + VYN LIDG  ++G   EA+++  +M +  + PD FT 
Sbjct: 279 NRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTC 338

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +I+++GLC  GQ++ A   L+ M + GI  N   YN+LID +CK+G++ +AL+ C++M E
Sbjct: 339 SIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNE 398

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G+EPNVVT+SSLIDG  K   ++ AMG+Y EMV K + P+V+ +TA+I G +K G++  
Sbjct: 399 VGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDA 458

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG----YCSP-- 471
             RL+KEM E  I+ +  TVS L+ GL +  R+ +A+ F ++   +   G    +CS   
Sbjct: 459 AFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYT 518

Query: 472 --------NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                   N V Y  +I  L  DGQ  +A K FS MR  ++ PD+ TY+ ++RG      
Sbjct: 519 TEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGY 578

Query: 524 MLDVMMLLADMIKMGIVP 541
           +L+ MML ADM+K+G+ P
Sbjct: 579 VLNAMMLYADMVKIGVKP 596



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 4/356 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +     ++DGL K          F  M   G+ P++  YN L++     G++ +A  +
Sbjct: 123 PALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEV 182

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            ++M    I P+V TY+ +I  LC  G +  AE L   M + G+  N+ TYN+L+  +CK
Sbjct: 183 WNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCK 242

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              + + L++  ++ + G+ PN V  ++LI G   A  I      + EM    + P V V
Sbjct: 243 RDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPV 302

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + +LIDG  + G  +E L +Y++M    + P  FT S ++ GL   G++  A  F LE  
Sbjct: 303 YNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRF-LELM 361

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            ++     + N   Y A+I   C DG + +A    + M    + P+  TY++++ G  + 
Sbjct: 362 QQSG---INLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKK 418

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++M   M +  +M+  G+ P+ +    M+ G+ + GDL +AFR  + + E  I S+
Sbjct: 419 RKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSN 474



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 4/378 (1%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
            +P L   NA++DG  K    +R  + + EML   + P++VT+  L++     G++  A 
Sbjct: 121 TLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAW 180

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             +  M    + PN+  Y+ +I   C+ G + EA  L   M++  + P+++TYN L+   
Sbjct: 181 EVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSH 240

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C    +     L Q++ K G++ N V   +LI G+     +    +   +M   G+ P V
Sbjct: 241 CKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTV 300

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             ++SLIDG  ++G    A+ +Y +M    L PD    + ++ GL   G ++   R  + 
Sbjct: 301 PVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLEL 360

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M ++ I  +    ++LI    K+G ++ AL        + +     PN V Y+++I    
Sbjct: 361 MQQSGINLNAAAYNALIDEHCKDGNLAEAL----ATCTRMNEVGIEPNVVTYSSLIDGHS 416

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              ++  A  ++ +M +  + P+  TYT M+ G  +   +     L  +M + GI  +A+
Sbjct: 417 KKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAI 476

Query: 545 INQVMVRGYQENGDLKSA 562
              V+V G      ++ A
Sbjct: 477 TVSVLVDGLCRESRVQDA 494



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 23/237 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N + ++ LI    + G++ EAL       ++ + P +   ++L++G  KK K +     
Sbjct: 368 LNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGI 427

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EMV  G+  +V+TY  +I      GD+  A  L  EM +KGI    +  ++L+ GLC 
Sbjct: 428 YMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCR 487

Query: 167 ENKMVEAE-------------------SMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           E+++ +A                    S + +  +C ++ N  TY  L+ G       + 
Sbjct: 488 ESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSIL-NSVTYMTLIYGLYIDGQYHE 546

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           A +F+  M   ++ P+  T+ +L+ G C +G +  A   +  M K GV P  +   C
Sbjct: 547 AGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPRRYATVC 603


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 179/459 (38%), Positives = 279/459 (60%), Gaps = 16/459 (3%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+IA S+M   +EAL V+ ++  LPA+ ACNA+L+GL+K      VWE ++EM+  G+V 
Sbjct: 112 LVIALSQMALPDEALSVFGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVP 171

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            VVTY  LI+ C  QGDV KA  ++D+M+ + I+P VV YT +I  LC E+ + +AE +F
Sbjct: 172 SVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLF 231

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+E G+ PNLYTYNALM  + K  ++  AL FY+++L   L PN V F  L+DGLC+ 
Sbjct: 232 LEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQA 291

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A N F+ M ++ V P + VYN LI G  ++G   EA++   E+ +  + PD FT 
Sbjct: 292 NRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTC 351

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +I+++GLC       A     +M + G+  +VVTY+SLIDG+ K G+ME A+++ ++M  
Sbjct: 352 SIVVRGLC------DALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 405

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KGVEPNVVT+++LI G  K G++DAA  L  EM  K +  + +  + L+DGL ++  +++
Sbjct: 406 KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQD 465

Query: 418 TLRL---YKEMLEAKITPSV---FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            +R    Y    +++  PS+    T  +LI+GL+ +G+ + A +FF   +   D G   P
Sbjct: 466 AVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFF---SCMRDSGMV-P 521

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           +   Y  +I+ LC  G +L A  L++DM    ++P  C 
Sbjct: 522 DRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 560



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 13/352 (3%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             GVL+  L ++     A + F  + +    P     N ++DG  KA  L     L  EM
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEM 164

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + P V TYN LI      G +  A  +  +M    I  NVVTY ++I   C+E  +
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCI 224

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  +  +M E G+ PN+ T+++L+    K  NI  A+  Y +++   LVP+ V+FT L
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTL 284

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDGL +   + E   ++ +M   ++ P+V   +SLIHG F++G    AL FF E   K  
Sbjct: 285 IDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG- 343

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P+    + +++ LC       A    + M    + P   TY++++ G  +   M 
Sbjct: 344 ---LRPDEFTCSIVVRGLC------DALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEME 394

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             M +  +M+  G+ P+ V    ++ G+ +NGD+ +AF   + ++E  I S+
Sbjct: 395 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSN 446



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 131/253 (51%), Gaps = 8/253 (3%)

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+++DG  K   + +   +  +M  +G+ P+VVT+++LI+     G++  A  ++ +MV 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + + P+VV +T +I  L ++  + +   L+ EM EA + P+++T ++L+   FK   I +
Sbjct: 202 RRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           AL F+    D    G   PN V++  +I  LC   +I +A  +F DM    + P    Y 
Sbjct: 262 ALVFYY---DLLKCGLV-PNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYN 317

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +++ G  R+    + +    ++I+ G+ PD     ++VRG  +   L +  R SE   E 
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDA--LVTCTRMSEVGVEP 375

Query: 573 RI--GSSETEGHT 583
            +   SS  +GH+
Sbjct: 376 HVVTYSSLIDGHS 388


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 179/526 (34%), Positives = 287/526 (54%), Gaps = 9/526 (1%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F P+VFS  T++  F +   +E ALW+  ++ +    P + +   ++NGL K  + D   
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++M+  G   +V+TYG L+D  C  GD+  A+ L  +M ++G  P  + Y  ++HGL
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 165 CNENKMVEAESMFRSMRECGVVP-NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           C+  K+  A  +F+ M E G  P +++TY+ ++D   K   V+ A      M+     PN
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+  L+ GLCK G+L  A      M + G  PNI  YN +IDGHCK G + EA  L  
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM      P+V TY +L+   C  G+ E A GL++ M ++G + N+ TYNSL+D +CK+ 
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++E+A  + S M +KG  PNVV+++++I G CKA  +   + L  +M+  + VPD+V F 
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +ID + K   +     L+  + E+  TP++ T +SL+HGL K+ R   A     E T K
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                CSP+ + Y  +I  LC   ++ +A KLF  M SD L PD+ TY+ ++  L + + 
Sbjct: 495 QG---CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           M +   +L  M+K G  P A+    ++ G+ + G+L  A    + L
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 597



 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 279/520 (53%), Gaps = 8/520 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWEF 106
           K +  V  +++    + G   +A+  +R++     P     N ++NGL K  + D     
Sbjct: 7   KAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRL 66

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EEMV  G   +V +Y  ++   C    V  AL L ++M+ +G  P VV YT +I+GLC 
Sbjct: 67  LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCK 126

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +++ EA  +   M + G  PN+ TY  L+DG+C+V D++ A+E   +M     +PN +T
Sbjct: 127 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 186

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           +  +M GLC   +L +A   F  M + G   P++F Y+ ++D   K+G + +A  L   M
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM 246

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                SP+V TY+ L+ GLC  G+L+ A  LLQ+M + G   N+VTYN++IDG+CK G +
Sbjct: 247 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI 306

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M + G +PNVVT++ L+D  CK G  + A+GL   MV K  VP++  + +L
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D   K   ++   +L   M++    P+V + +++I GL K  ++   +   LE+    +
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV-LLLEQMLSNN 425

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C P+ V +  II A+C   ++  A +LF+ ++     P+  TY +++ GL +++R  
Sbjct: 426 ---CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482

Query: 526 DVMMLLADMI-KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
               LL +M  K G  PD +    ++ G  ++  +  A++
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 248/486 (51%), Gaps = 16/486 (3%)

Query: 52  PSVF--STLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSV 103
           P VF  ST++ +  + G +++A    R +E +      P +   ++LL+GL K GK D  
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDAC---RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               + M   G   ++VTY  +ID  C  G + +A +L +EM+D G +P VV YT+L+  
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C   K  +A  +   M E G VPNL+TYN+L+D +CK  +V RA +    M+     PN
Sbjct: 335 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VV++  ++ GLCK  ++         M      P+I  +N +ID  CK   +  A  L +
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 454

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVVTYNSLIDGYCKE 342
            +++   +P++ TYN L+ GLC   + + AE LL++M  K+G   +++TYN++IDG CK 
Sbjct: 455 LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A  +  QM   G+ P+ VT+S +I   CK   +D A  +   M+     P  + +
Sbjct: 515 KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITY 574

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             LIDG  K GN+ + L + + +L     P V T S  I  L K GR+  A    LE   
Sbjct: 575 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA-GELLETML 633

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +       P+ V Y  +++  C   +   A  LF  MR     PDN TYTT++  L+  K
Sbjct: 634 RAG---LVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKK 690

Query: 523 RMLDVM 528
              D++
Sbjct: 691 SYKDLL 696



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 245/467 (52%), Gaps = 10/467 (2%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE- 79
           + ++L+KS K    C  V   ++    P  N   +S+L+    + G ++EA  + +++  
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSP--NVVTYSSLLHGLCKAGKLDEATALLQRMTR 283

Query: 80  --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
               P I   N +++G  K G+ D  +   EEMV  G   +VVTY VL+D  C  G    
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ L + M++KG  P +  Y  L+   C ++++  A  +  SM + G VPN+ +YN ++ 
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 403

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CK   V+  +    +ML +N  P++VTF  ++D +CK   +  A   F  + + G  P
Sbjct: 404 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGL 316
           N+  YN L+ G CK+    +A  L  EM + +  SPD+ TYN +I GLC   +++ A  L
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M  +G+  + VTY+ +I   CK   M++A +V   M + G +P  +T+ +LIDG CK
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN+D A+ +   ++ K   PDVV F+  ID LSK G +++   L + ML A + P   T
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            ++L+ G     R  +A++ F  +  +  G  C P++  Y  ++  L
Sbjct: 644 YNTLLKGFCDASRTEDAVDLF--EVMRQCG--CEPDNATYTTLVGHL 686



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 219/479 (45%), Gaps = 76/479 (15%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-REC-------------------- 183
           M  KG++    ++  ++ GLC+  +  +A   FR M + C                    
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 184 -------------GVVPNLYTYNALMDGYCKVADVNRALEFYHE---------------- 214
                        G  PN+++YN ++ G+CK   V  AL    +                
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 215 -------------------MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                              M+    QPNV+T+G L+DG C+VG+L  A      M + G 
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF-EISPDVFTYNILIKGLCGVGQLEGAE 314
            PN   YN ++ G C    L  A+ L  EME+     PDVFTY+ ++  L   G+++ A 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L++ M  +G   NVVTY+SL+ G CK G +++A ++  +MT  G  PN+VT++++IDG 
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G ID A  L  EMV     P+VV +T L+D   K G  ++ + L + M+E    P++
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 360

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT +SL+    K   +  A         K     C PN V Y  +I  LC   ++ +   
Sbjct: 361 FTYNSLLDMFCKKDEVERACQLLSSMIQKG----CVPNVVSYNTVIAGLCKATKVHEGVL 416

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK-MGIVPDAVINQVMVRG 552
           L   M S+N  PD  T+ T++  + +  R +D+   L ++I+  G  P+ V    +V G
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYR-VDIAYELFNLIQESGCTPNLVTYNSLVHG 474



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 184/343 (53%), Gaps = 6/343 (1%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++ GLC  G+   A   F  M+K    P+   YN +I+G  K+  L +A+ L  EM    
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            +P+VF+YN ++ G C   ++E A  LL++M   G   +VV+Y ++I+G CK   +++A 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V  +M ++G +PNV+T+ +L+DG C+ G++D A+ L  +M  +   P+ + +  ++ GL
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 410 SKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
                +   L+L+KEM E+    P VFT S+++  L K+G++ +A         K     
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG---- 250

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSPN V Y++++  LC  G++ +A+ L   M      P+  TY T++ G  +  R+ +  
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            LL +M+  G  P+ V   V++  + + G  + A    E + E
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 10/376 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N   ++ L+ AF + G  E+A+ +   +EV+      P +   N+LL+   KK + +   
Sbjct: 324 NVVTYTVLLDAFCKCGKAEDAIGL---VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +    M+  G V +VV+Y  +I   C    V + + L ++M+     P +V +  +I  +
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPN 223
           C   ++  A  +F  ++E G  PNL TYN+L+ G CK    ++A     EM       P+
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++T+  ++DGLCK   +  A   F+ M   G+ P+   Y+ +I   CK   + EA ++  
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M K    P   TY  LI G C  G L+ A  +LQ +  +G   +VVT++  ID   K G
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + +A  +   M   G+ P+ VT+++L+ G C A   + A+ L+  M      PD   +T
Sbjct: 621 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYT 680

Query: 404 ALIDGLSKDGNMKETL 419
            L+  L    + K+ L
Sbjct: 681 TLVGHLVDKKSYKDLL 696



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 5/218 (2%)

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG++ +     S++ G C AG    A+  + EM  K+  PD V +  +I+GLSK   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDR 59

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + + +RL +EM++    P+VF+ ++++HG  K  R+ NAL + LE+        C P+ V
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL-WLLEQMVMRG---CPPDVV 115

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I  LC   Q+ +A ++   M     +P+  TY T++ G  R   +   + L+  M
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            + G  P+A+    ++ G      L SA +  + ++ES
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/577 (32%), Positives = 312/577 (54%), Gaps = 19/577 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLE---IPKFNPSVFST 57
           + ++L  A++Y +A  +++++    + S+     C  VF+ L S     +P F   VF  
Sbjct: 16  VAHILFCARMYYDANSILREI----VLSKAELEEC-DVFDELWSTRNVCVPGF--GVFDA 68

Query: 58  LIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L     ++G +EEA   + K++   V P  ++CN LL+   K GK D V  F+++M+  G
Sbjct: 69  LFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAG 128

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
               V TY ++IDC   +GD+  A  LF+EM  +G+ P  V Y  +I G     ++ +  
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
             F  M+     P++ TYN+L++ +CK   + + LEFY EM    L+PNVV++  L+D  
Sbjct: 189 YFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAF 248

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK   ++ A  F+V M + G  PN F Y  L+D +CK GNL +A  L +EM +  +  +V
Sbjct: 249 CKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNV 308

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY  LI GLC   +++ AE L  KM   G++ N+ +YN+LI G+ K  +M++AL + ++
Sbjct: 309 VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 368

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +  +G++P+++ + + I G C    I+AA  +  EM    +  + +++T L+D   K GN
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             E L L +EM E     +V T   LI GL KN  +S A+++F   ++  D G   PN  
Sbjct: 429 PTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSN--DFG-LQPNAA 485

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           +Y A+I  LC + Q+  A+ LF  M  + L PD   YT+++ G L+   ML+ + L   M
Sbjct: 486 VYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKM 545

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            ++G+  D +    +V G+ +   L+ A     FL+E
Sbjct: 546 AEIGMKLDLLAYTSLVWGFSQCNQLQKA---RSFLEE 579



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 213/383 (55%), Gaps = 4/383 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  F + G + + L  YR+++   + P + + + L++   K+       +FY +M
Sbjct: 205 TYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDM 264

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G V +  TY  L+D  C  G++  A  L +EM++ G+E  VV YT LI GLC+  +M
Sbjct: 265 RRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERM 324

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE +F  M   GV+PNL +YNAL+ G+ K  +++RALE  +E+    +QP+++ +G  
Sbjct: 325 KEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF 384

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC + ++ AA      M + G+  N  +Y  L+D + K+GN  E + L  EM++ + 
Sbjct: 385 IWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDH 444

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKAL 349
              V T+ +LI GLC    +  A     +M  + G+  N   Y ++IDG CKE  ++ A 
Sbjct: 445 EVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAAT 504

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  QM ++G+ P+   ++SL+DG  K GN+  A+ L  +M    +  D++ +T+L+ G 
Sbjct: 505 TLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGF 564

Query: 410 SKDGNMKETLRLYKEMLEAKITP 432
           S+   +++     +EM+  +I P
Sbjct: 565 SQCNQLQKARSFLEEMIGEEILP 587



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 4/286 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           ++N   ++ LI    +   ++EA  ++ K+    V+P + + NAL++G +K    D   E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              E+   G+  D++ YG  I   CG   +  A  + +EM + GI+   +IYT L+    
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
                 E   +   M+E      + T+  L+DG CK   V++A++++  M +   LQPN 
Sbjct: 425 KSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNA 484

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             +  ++DGLCK  +++AA   F  MA+ G+ P+   Y  L+DG+ K GN+ EA++L  +
Sbjct: 485 AVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDK 544

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           M +  +  D+  Y  L+ G     QL+ A   L++M  E IL + V
Sbjct: 545 MAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 4/177 (2%)

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VP   VF AL   L   G ++E  + + +M   ++ P   + + L+H   K G+      
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           FF +      G    P    Y  +I  +  +G I  A  LF +M+   L PD  TY +M+
Sbjct: 120 FFKDMI----GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI 175

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            G  +  R+ D +    +M  M   PD +    ++  + ++G L         +K+S
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 197/599 (32%), Positives = 306/599 (51%), Gaps = 46/599 (7%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           ++L     Y +AR +IK+    LL    P    + +  +  ++  P F   VF TL    
Sbjct: 136 HILFCGMFYLDARSVIKEWI--LLGREFPGCDFFDMLWSTRNVCRPGFG--VFDTLFNVL 191

Query: 63  SEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
            ++G +EEA    W   K  VLP +++CN LL+ L K  K      F+++MV+ GL   V
Sbjct: 192 VDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSV 251

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            TY ++I C   +GD+  A +LF+EM  KG+ P +V Y  LI G      +  A S+F  
Sbjct: 252 FTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEE 311

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M++ G  P++ TYN+L++ +CK   + +A E+ H M    LQPNVVT+  L+D  CK G 
Sbjct: 312 MKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A  FFV M + G+ PN F Y  LID +CK G+L EA  L SEM++  ++ ++ TY  
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTA 431

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ GLC  G++  AE L   + K G   N   Y SL  GY K   MEKA+ +  +M +K 
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           ++P+++ + + I G C+   I+ +M +  EM+   L  +  ++T LID   K G   E +
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L +EM +  I  +V T   LI GL K G +  A+ +F    D        PN ++Y A+
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYF----DHMTRNGLQPNIMIYTAL 607

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR----------AKRMLDVMM 529
           I  LC +  + +A  LF++M    + PD   YT+++ G ++            RM+++ M
Sbjct: 608 IDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGM 667

Query: 530 -------------------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                                    LL +M++ GI+PD V+   ++R Y E GD+  A 
Sbjct: 668 ELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 215/414 (51%), Gaps = 4/414 (0%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P   ++  L + L +   + EA   F  M +  V+P + + N L+    K +    AL 
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F+ +M+   L P+V T+ +++  L + G+L AA + F  M   G+ P+I  YN LIDG+ 
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G L  A+S+  EM+     PDV TYN LI   C   ++  A   L  M + G+  NVV
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TY++LID +CK G + +A      M   G++PN  T++SLID  CK G+++ A  L +EM
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               +  ++V +TAL+DGL +DG M+E   L+  +L+A  T +    +SL HG  K   +
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A++  LE+ +K +     P+ +LY   I  LC   +I  +  +  +M    L  ++  
Sbjct: 478 EKAMDI-LEEMNKKN---LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           YTT++    +  +  + + LL +M  +GI    V   V++ G  + G ++ A R
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 225/454 (49%), Gaps = 7/454 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  + ++G +  A+ V+ +++     P +   N+L+N   K  +    +E+   M
Sbjct: 288 TYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +VVTY  LID  C  G +++A   F +MI  G++P    YT LI   C    +
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDL 407

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M++ GV  N+ TY AL+DG C+   +  A E +  +L      N   +  L
Sbjct: 408 NEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
             G  K   +  A +    M K  + P++ +Y   I G C+   + ++M++  EM    +
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + + + Y  LI     VG+   A  LLQ+M   GI   VVTY  LIDG CK G +++A+ 
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
               MT  G++PN++ +++LIDG CK   ++ A  L+ EM+ K + PD +V+T+LIDG  
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN  E L L   M+E  +   +   +SLI G  + G++  A +   E   K       
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG----II 703

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           P+ VL   +++     G I +A  L  DM    L
Sbjct: 704 PDQVLCICLLRKYYELGDINEALALHDDMARRGL 737



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 187/356 (52%), Gaps = 3/356 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI A  ++G + EA  +  +++   V   I    ALL+GL + G+     E +
Sbjct: 390 NEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             ++  G   +   Y  L         + KA+++ +EM  K ++P +++Y   I GLC +
Sbjct: 450 GALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQ 509

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N++ ++ ++ R M +CG+  N Y Y  L+D Y KV     A+    EM    ++  VVT+
Sbjct: 510 NEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTY 569

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           GVL+DGLCK+G ++ A  +F HM + G+ PNI +Y  LIDG CK   L EA +L +EM  
Sbjct: 570 GVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLD 629

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ISPD   Y  LI G    G    A  L  +M + G+  ++  Y SLI G+ + G ++ 
Sbjct: 630 KGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQL 689

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           A S+  +M  KG+ P+ V    L+    + G+I+ A+ L+ +M  + L+   +  T
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDIT 745



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 121/243 (49%), Gaps = 4/243 (1%)

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +++L +     G +E+A     +M +  V P V + + L+    K+     A+  + +MV
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           +  L P V  +  +I  L+++G+++    L++EM    + P + T +SLI G  K G ++
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A++ F E  D      C P+ + Y ++I   C   +I +A +    M+   L+P+  TY
Sbjct: 304 GAVSVFEEMKDAG----CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTY 359

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +T++    +A  +L+      DMI++G+ P+      ++    + GDL  AF+    +++
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419

Query: 572 SRI 574
           + +
Sbjct: 420 AGV 422


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 188/574 (32%), Positives = 306/574 (53%), Gaps = 14/574 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L  A++Y +A  ++K++   L     P    + +     ++ +P F   VF  L  
Sbjct: 15  LVHILFYARMYFHANNILKELV--LSSWVLPGSDVFEILWTTRNVCVPGF--GVFDALFS 70

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
              E+G +E A   +    K  VLP  ++CNA L+ L K G+ D   +F+ +MV  G+  
Sbjct: 71  VLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAP 130

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            V TY ++I   C +GD++ A +LF++M   G+ P +V Y  LI G      + E+  +F
Sbjct: 131 TVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLF 190

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+  G  P++ TYNAL++ +CK   + RA EF+ EM   +L+PNV+++  L+D LCK 
Sbjct: 191 EEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKE 250

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G ++ A  FFV M + G+ PN F Y+ LID +CKAGNL EA  L  EM +  +  ++ TY
Sbjct: 251 GMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTY 310

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+ GLC  G +  AE L + M K G+  N+  Y +LI G+ K   M+KA+ + ++M E
Sbjct: 311 TTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMRE 370

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K ++P+++ + +++ G C    ++    + TEM    +  + V++T L+D   K GN  E
Sbjct: 371 KDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTE 430

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            + L +EM +     +V T  +LI GL K G +  A+ +F    D        PN  +Y 
Sbjct: 431 AINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD----LQPNVAVYT 486

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC +  I  A KLF +M+  N+ PD   YT M+ G L+     + + +   M++M
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM 546

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           GI  D      +V G  + G ++ A    +FL E
Sbjct: 547 GIELDLYAYTSLVWGLSQCGQVQQA---RKFLAE 577



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/465 (33%), Positives = 248/465 (53%), Gaps = 4/465 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           +K+ + P I   N L++G  K G  D     +EEM   G   DV+TY  LI+  C    +
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGM 218

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           ++A   F EM DK ++P V+ Y+ LI  LC E  M  A   F  M   G++PN +TY++L
Sbjct: 219 LRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +D  CK  ++  A     EML  ++  N+VT+  L+DGLC+ G +  A   F  M K GV
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGV 338

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y  LI GH K  ++ +AM L +EM + +I PD+  +  ++ GLC   +LE  + 
Sbjct: 339 TPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKI 398

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           ++ +M + GI AN V Y +L+D Y K G+  +A+++  +M + G E  VVTF +LIDG C
Sbjct: 399 IMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLC 458

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +  A+  +  M    L P+V V+TALIDGL K+  + +  +L+ EM +  + P   
Sbjct: 459 KRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKI 518

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             +++I G  K+G    ALN    +    + G    +   Y +++  L   GQ+ +A K 
Sbjct: 519 AYTAMIDGNLKHGNFQEALNM---RNKMMEMG-IELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            ++M    + PD    T +LR       + + + L  ++++ G++
Sbjct: 575 LAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 221/413 (53%), Gaps = 3/413 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI +F +   +  A   +R++   ++ P + + + L++ L K+G      +F+ +M
Sbjct: 204 TYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDM 263

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL+ +  TY  LID  C  G++ +A  L DEM+ + ++  +V YT L+ GLC E  M
Sbjct: 264 TRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMM 323

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE +FR+M + GV PNL  Y AL+ G+ KV  +++A+E ++EM   +++P+++ +G +
Sbjct: 324 NEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTI 383

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   +L         M + G+  N  +Y  L+D + KAGN  EA++L  EM     
Sbjct: 384 VWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              V T+  LI GLC  G ++ A     +M    +  NV  Y +LIDG CK   +  A  
Sbjct: 444 EVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK 503

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +K + P+ + ++++IDG  K GN   A+ +  +M+   +  D+  +T+L+ GLS
Sbjct: 504 LFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLS 563

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + G +++  +   EM+   I P     + L+   ++ G I  A+    E  +K
Sbjct: 564 QCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEK 616



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 182/356 (51%), Gaps = 4/356 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P    F  L   L ++G L AAG  F+ M KF V P     N  +    KAG    +   
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    I+P VFTYNI+I  +C  G +  A  L ++M K G+  ++VTYN+LIDGY K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +++++ +  +M   G EP+V+T+++LI+  CK   +  A   + EM  K L P+V+ 
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           ++ LID L K+G M+  ++ + +M    + P+ FT SSLI    K G +  A  F L   
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA--FML--A 295

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+    +   N V Y  ++  LC +G + +A +LF  M    + P+   YT ++ G ++ 
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           + M   M L  +M +  I PD ++   +V G      L+        +KES IG++
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGAN 411



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 177/349 (50%), Gaps = 3/349 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S+LI A  + G++ EA  +  ++    V   I     LL+GL ++G  +   E +
Sbjct: 271 NEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF 330

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+  ++  Y  LI        + KA+ LF+EM +K I+P ++++  ++ GLC+E
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSE 390

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +K+ E + +   M+E G+  N   Y  LMD Y K  +   A+    EM     +  VVTF
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLCK G ++ A  +F  M    + PN+ VY  LIDG CK   + +A  L  EM+ 
Sbjct: 451 CALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD 510

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD   Y  +I G    G  + A  +  KM + GI  ++  Y SL+ G  + G +++
Sbjct: 511 KNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQ 570

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           A    ++M  KG+ P+    + L+    + GNID A+ L  E+V K L+
Sbjct: 571 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 186/568 (32%), Positives = 304/568 (53%), Gaps = 14/568 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKP--HHVCYSVFNALNSLE-IPKFNPSVFST 57
           I +++  A++Y +A   +K+V   ++ SR      VC ++F+ L S   I      VF  
Sbjct: 169 IVHLVFRARMYTDAHDTVKEV---IMNSRMDMGFPVC-NIFDMLWSTRNICVSGSGVFDV 224

Query: 58  LIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L   F E+G +EEA   +   R    LP  ++CN LL+ L K G    V +F+ +M+  G
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +   V TY V+ID  C +GD+  +  LF +M + G+ P VV Y  LI G      + E  
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           S+F  M++ G VP++ TYN L++ YCK   + RA E++ EM ++ L+PNVVT+  L+D  
Sbjct: 345 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G ++ A   FV M + G+ PN F Y  LID +CKAGNL EA  L ++M +  +  ++
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY  L+ GLC  G++  AE + + M K+GI  N   Y +L+ GY K   ME A+ +  Q
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MTE  ++P+++ + S+I G C    ++    +  EM  + +  + V+ T +ID   K G 
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             + L  ++EM +  +  ++ T   LI GL K G +  A+++F             PN  
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG----LQPNVA 640

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           +Y ++I  LC +  I  A KLF +M+   + PD   +T ++ G L+   + + ++L++ M
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 700

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++ I  D  +   +V G+ + G+L  A
Sbjct: 701 TELAIEFDLHVYTSLVSGFSQCGELHQA 728



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 226/460 (49%), Gaps = 7/460 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  + ++G +EE   ++ +++    +P I   N L+N   K  K    +E++ EM
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 385

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +VVTY  LID  C +G +  A+ LF +M   G+ P    YT LI   C    +
Sbjct: 386 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNL 445

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M + GV  N+ TY AL+DG CK   +  A E +  ML   + PN   +  L
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G  K   +  A      M +  + P++ +Y  +I GHC    L E   +  EM+   I
Sbjct: 506 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S +      +I      G+   A    Q+M   G+ A +VTY  LIDG CK G +E A+ 
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD 625

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M   G++PNV  ++SLIDG CK   I++A  L+ EM  + + PD+  FTALIDG  
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 685

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN++E L L   M E  I   +   +SL+ G  + G +  A  FF E  +K       
Sbjct: 686 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG----IL 741

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           P  VL   +++     GQ+ +A +L ++M    L  ++ T
Sbjct: 742 PEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  318 bits (814), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 187/574 (32%), Positives = 310/574 (54%), Gaps = 16/574 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L  A++Y +A  ++K++  +     K     + V  +  ++ +P F   VF  L  
Sbjct: 16  VAHILFCARMYYDANSVLKEMVLS-----KADCDVFDVLWSTRNVCVPGF--GVFDALFS 68

Query: 61  AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
              ++G +EEA+  + K++   V P  ++CN LL+   K GK D V  F+++M+  G   
Sbjct: 69  VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 128

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            V TY ++IDC C +GDV  A  LF+EM  +G+ P  V Y  +I G     ++ +    F
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M++    P++ TYNAL++ +CK   +   LEFY EM  + L+PNVV++  L+D  CK 
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G ++ A  F+V M + G+ PN + Y  LID +CK GNL +A  L +EM +  +  +V TY
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI GLC   +++ AE L  KM   G++ N+ +YN+LI G+ K  +M++AL + +++  
Sbjct: 309 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 368

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++P+++ + + I G C    I+AA  +  EM    +  + +++T L+D   K GN  E
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L L  EM E  I  +V T   LI GL KN  +S A+++F   ++  D G    N  ++ 
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN--DFGL-QANAAIFT 485

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC D Q+  A+ LF  M    L PD   YT+++ G  +   +L+ + L   M ++
Sbjct: 486 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 545

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           G+  D +    +V G      L+ A     FL+E
Sbjct: 546 GMKLDLLAYTSLVWGLSHCNQLQKA---RSFLEE 576



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 222/405 (54%), Gaps = 4/405 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI  F + G +   L  YR+++   + P + + + L++   K+G      +FY +M
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLV +  TY  LID  C  G++  A  L +EM+  G+E  VV YT LI GLC+  +M
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE +F  M   GV+PNL +YNAL+ G+ K  +++RALE  +E+    ++P+++ +G  
Sbjct: 322 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC + ++ AA      M + G+  N  +Y  L+D + K+GN  E + L  EM++ +I
Sbjct: 382 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKAL 349
              V T+ +LI GLC    +  A     ++  + G+ AN   + ++IDG CK+  +E A 
Sbjct: 442 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  QM +KG+ P+   ++SL+DG  K GN+  A+ L  +M    +  D++ +T+L+ GL
Sbjct: 502 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           S    +++     +EM+   I P      S++   ++ G I  A+
Sbjct: 562 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 606



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 160/311 (51%), Gaps = 4/311 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           ++N   ++ LI    +   ++EA  ++ K++   V+P + + NAL++G +K    D   E
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              E+   G+  D++ YG  I   C    +  A  + +EM + GI+   +IYT L+    
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
                 E   +   M+E  +   + T+  L+DG CK   V++A+++++ + +   LQ N 
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             F  ++DGLCK  ++ AA   F  M + G+ P+   Y  L+DG+ K GN+ EA++L  +
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  +  D+  Y  L+ GL    QL+ A   L++M  EGI  + V   S++  + + G 
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601

Query: 345 MEKALSVCSQM 355
           +++A+ + S +
Sbjct: 602 IDEAVELQSYL 612



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 8/256 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN----ALLNGLI 95
           LN L+     P +  + T I     +  IE A  V  +++    I+A +     L++   
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTTLMDAYF 421

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTV 154
           K G         +EM    +   VVT+ VLID  C    V KA++ F+ +  D G++   
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            I+T +I GLC +N++  A ++F  M + G+VP+   Y +LMDG  K  +V  AL    +
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++ +++ +  L+ GL    +L+ A +F   M   G+ P+  +   ++  H + G 
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601

Query: 275 LFEAMSLCSEMEKFEI 290
           + EA+ L S + K ++
Sbjct: 602 IDEAVELQSYLMKHQL 617


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  317 bits (813), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 187/574 (32%), Positives = 310/574 (54%), Gaps = 16/574 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L  A++Y +A  ++K++  +     K     + V  +  ++ +P F   VF  L  
Sbjct: 148 VAHILFCARMYYDANSVLKEMVLS-----KADCDVFDVLWSTRNVCVPGF--GVFDALFS 200

Query: 61  AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
              ++G +EEA+  + K++   V P  ++CN LL+   K GK D V  F+++M+  G   
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            V TY ++IDC C +GDV  A  LF+EM  +G+ P  V Y  +I G     ++ +    F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M++    P++ TYNAL++ +CK   +   LEFY EM  + L+PNVV++  L+D  CK 
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G ++ A  F+V M + G+ PN + Y  LID +CK GNL +A  L +EM +  +  +V TY
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI GLC   +++ AE L  KM   G++ N+ +YN+LI G+ K  +M++AL + +++  
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++P+++ + + I G C    I+AA  +  EM    +  + +++T L+D   K GN  E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L L  EM E  I  +V T   LI GL KN  +S A+++F   ++  D G    N  ++ 
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN--DFGL-QANAAIFT 617

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC D Q+  A+ LF  M    L PD   YT+++ G  +   +L+ + L   M ++
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           G+  D +    +V G      L+ A     FL+E
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKA---RSFLEE 708



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 222/405 (54%), Gaps = 4/405 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI  F + G +   L  YR+++   + P + + + L++   K+G      +FY +M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLV +  TY  LID  C  G++  A  L +EM+  G+E  VV YT LI GLC+  +M
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE +F  M   GV+PNL +YNAL+ G+ K  +++RALE  +E+    ++P+++ +G  
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC + ++ AA      M + G+  N  +Y  L+D + K+GN  E + L  EM++ +I
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKAL 349
              V T+ +LI GLC    +  A     ++  + G+ AN   + ++IDG CK+  +E A 
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  QM +KG+ P+   ++SL+DG  K GN+  A+ L  +M    +  D++ +T+L+ GL
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           S    +++     +EM+   I P      S++   ++ G I  A+
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 160/311 (51%), Gaps = 4/311 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           ++N   ++ LI    +   ++EA  ++ K++   V+P + + NAL++G +K    D   E
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              E+   G+  D++ YG  I   C    +  A  + +EM + GI+   +IYT L+    
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
                 E   +   M+E  +   + T+  L+DG CK   V++A+++++ + +   LQ N 
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             F  ++DGLCK  ++ AA   F  M + G+ P+   Y  L+DG+ K GN+ EA++L  +
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  +  D+  Y  L+ GL    QL+ A   L++M  EGI  + V   S++  + + G 
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733

Query: 345 MEKALSVCSQM 355
           +++A+ + S +
Sbjct: 734 IDEAVELQSYL 744



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 8/256 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN----ALLNGLI 95
           LN L+     P +  + T I     +  IE A  V  +++    I+A +     L++   
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTTLMDAYF 553

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTV 154
           K G         +EM    +   VVT+ VLID  C    V KA++ F+ +  D G++   
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            I+T +I GLC +N++  A ++F  M + G+VP+   Y +LMDG  K  +V  AL    +
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++ +++ +  L+ GL    +L+ A +F   M   G+ P+  +   ++  H + G 
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733

Query: 275 LFEAMSLCSEMEKFEI 290
           + EA+ L S + K ++
Sbjct: 734 IDEAVELQSYLMKHQL 749


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 280/543 (51%), Gaps = 33/543 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ L+    + G +E+A  +  +   + + P  Q  N ++ G +K+     V +
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM    LV    T G++I+  C  G +  A  +F+ M+  G++P  VIYT LI G  
Sbjct: 433 LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHV 492

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E +  EA  + + M + GV P++  YN+++ G CK   +  A ++  EM+   L+PNV 
Sbjct: 493 QEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY 552

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G L+ G CK GE++ A  +F  M   G+ PN  V   LIDG+CK G+  EA S+   M
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PDV TY+ LI GL   G+L+GA  LL +  ++G++ +V TYNS+I G+CK+G +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA  +   M +KG+ PN++T+++LI+G CKAG I+ A  L+  +  K L  + V +  +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K GN+ +  RL+ EM    + P  F  S+LI G  K G    AL+ FLE   K  
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792

Query: 466 G----------GYC--------------------SPNHVLYAAIIQALCYDGQILKASKL 495
                      G+C                     P+HV Y  +I   C  G + +A + 
Sbjct: 793 ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F DM+  NL P+  TYT +L G   A R  ++  L  +MI   I PD V   VM+  + +
Sbjct: 853 FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 556 NGD 558
            GD
Sbjct: 913 EGD 915



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 181/564 (32%), Positives = 277/564 (49%), Gaps = 44/564 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI A    G+ +E   +  ++E     P++   N ++ GL + G+ D  +E  + M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLVADV TY +LID    Q    +A  + +EM  KG++P  V YT LI G   +   
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-------------- 216
            EA  +   M   GV  NL+TYNAL+ G CK  D+ +A    +EM+              
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 217 ---------------------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                                  NL P   T G++++GLC+ G +  A   F  M   GV
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI GH + G   EA+ +   M+K  + PDV  YN +I GLC   ++E A+ 
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L +M + G+  NV TY +LI GYCK G+M+ A     +M   G+ PN V  ++LIDG C
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G+   A  ++  M+ +S+ PDV  ++ALI GL ++G ++  + L  E LE  + P VF
Sbjct: 598 KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +S+I G  K G I  A         K      SPN + Y A+I  LC  G+I +A +L
Sbjct: 658 TYNSIISGFCKQGGIGKAFQLHEYMCQKG----ISPNIITYNALINGLCKAGEIERAREL 713

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +    L  +  TY T++ G  ++  +     L  +M   G+ PD+ +   ++ G ++
Sbjct: 714 FDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRK 773

Query: 556 NGDLKSAFRCSEFLKESRIGSSET 579
            G+ + A   S FL+  + G + T
Sbjct: 774 EGNTEKAL--SLFLESVQKGFAST 795



 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 163/519 (31%), Positives = 268/519 (51%), Gaps = 7/519 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI  + + G  +EA+  +   ++   +  +  CN LL+ L+K  K +  W FY  M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   ++ DV TY  LI+     G+  +   L  EM +KG  P++V Y ++I GLC   ++
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M + G+V +++TY+ L+DG+ K      A     EM    L+P  V +  L
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG  + G+   A      M   GV  N+F YN L+ G CK G++ +A +L +EM    I
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYN +I+G          + LL +M K  ++    T   +I+G C+ G +E A  
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   GV+PN V +++LI G  + G    A+ +   M  K + PDV+ + ++I GL 
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K   M+E      EM+E  + P+V+T  +LIHG  K+G +  A  +F E      G   +
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML----GCGIA 583

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V+  A+I   C +G   +A+ +F  M   ++ PD  TY+ ++ GLLR  ++   M L
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           L++ ++ G+VPD      ++ G+ + G +  AF+  E++
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM 682



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 268/608 (44%), Gaps = 119/608 (19%)

Query: 38   VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGL 94
            VF  + SL + K N  +++TLI    + G  +EA+ + +   K  V P +   N+++ GL
Sbjct: 468  VFEIMVSLGV-KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 95   IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
             K  K +   ++  EM+  GL  +V TYG LI   C  G++  A   F EM+  GI P  
Sbjct: 527  CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 155  VIYTILIHGLCNENKMVEAESMFRSMR--------------------------------- 181
            V+ T LI G C E    EA S+FR M                                  
Sbjct: 587  VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 182  --ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
              E G+VP+++TYN+++ G+CK   + +A + +  M    + PN++T+  L++GLCK GE
Sbjct: 647  FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706

Query: 240  LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-- 297
            +  A   F  +   G+  N   Y  +IDG+CK+GNL +A  L  EM    + PD F Y  
Sbjct: 707  IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766

Query: 298  --------------------------------NILIKGLCGVGQLEGAEGLLQKMYKEGI 325
                                            N L+ G C  G++  A  LL+ M  + +
Sbjct: 767  LIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 326  LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              + VTY  LID +CK G +++A      M ++ + PN +T+++L+ G   AG       
Sbjct: 827  KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 386  LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
            L+ EM+ K + PD V ++ +ID   K+G+  +TL+L  +ML+                  
Sbjct: 887  LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK----------------- 929

Query: 446  KNGRISNALNFFLEKTDKTDGGYCSPN--HVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
                                GG  S N  HVL    I  LC    + +  K+   +    
Sbjct: 930  --------------------GGNVSKNVCHVL----IDPLCRKEHVSEVLKVLEKIEEQG 965

Query: 504  LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L     T +T++R   +A +M     +L  M++   VPD+     ++   Q++ D ++A 
Sbjct: 966  LNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENA- 1024

Query: 564  RCSEFLKE 571
               +FLK+
Sbjct: 1025 --GDFLKQ 1030


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 186/583 (31%), Positives = 294/583 (50%), Gaps = 70/583 (12%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVW 104
           K  P  ++ LI  F   G IE+A  +  ++ V   I+A     N LLNG+ K GK +   
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEM-VACGIEANLIIWNTLLNGVCKAGKMEKAL 375

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E  +EM+  G+  D  TY +LI+  C   ++ +A  L DEM  + + PTV+ Y+++I+GL
Sbjct: 376 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435

Query: 165 CN-----------------------------------ENKMVEAESMFRSMRECGVVPNL 189
           C                                    E ++ E+  +   MRE G++P++
Sbjct: 436 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 495

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + YN+L+ G+CK   +  A  +  EML   L+PN  T+G  +DG  K GE+  A  +F  
Sbjct: 496 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   GV PN+ +Y  LI+GHCK GN+ EA S+   +    +  DV TY++LI GL   G+
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A G+  ++ ++G+L N  TYNSLI G CK+G+++KA  +  +M  KG+ P++VT++ 
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG CKAG I+ A  L+ ++  + L P+ V + A++DG  K  N     +L +EML   
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG----------GYCS--------- 470
           + P  F  + +++   K  +   AL+ F E  +K             GYC          
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795

Query: 471 -----------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                      PNHV Y ++I   C  G + +A +L+ +M+  N+ P   TYT++L G  
Sbjct: 796 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               M +V  L  +M+  GI PD +   VM+  Y   G++  A
Sbjct: 856 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898



 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 315/636 (49%), Gaps = 81/636 (12%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L N+  Y  A  LIK +  N   S  P  V  S+     S      N  +F  L+ ++ +
Sbjct: 102 LCNSNWYGPASDLIKCIIRN---SDSPLAVLGSIVKCYRSCNGSP-NSVIFDMLMDSYRK 157

Query: 65  MGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           MG + EA+ V+   +  E  P++ +CN+LL  L+K  K +  W+ ++ M    ++ DV T
Sbjct: 158 MGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYT 217

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +I   C  G+V  A  +  EM +KG  P +V Y ++I GLC    + EA  + RSM 
Sbjct: 218 YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMV 277

Query: 182 ECGVVPNLYTYNALMDGYC-----------------------------------KVADVN 206
           + G+VP+LYTY+ L++G+C                                   +  D+ 
Sbjct: 278 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 337

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +A     EM+   ++ N++ +  L++G+CK G++  A      M + GV P+   Y+ LI
Sbjct: 338 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA------------- 313
           +GHC+  N+  A  L  EM+K +++P V TY+++I GLC  G L+G              
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457

Query: 314 ---------------EG-------LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
                          EG       +L++M ++GIL +V  YNSLI G+CK   ME+A + 
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 517

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M E+ + PN  T+ + IDG  KAG ++ A   + EM+   ++P+V ++TALI+G  K
Sbjct: 518 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +GN+ E   +++ +L  ++   V T S LIHGL +NG++  A   F E  +K       P
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG----LLP 633

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y ++I   C  G + KAS+L  +M    + PD  TY  ++ GL +A  +     L 
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            D+   G+ P+ V    MV GY ++ +  +AF+  E
Sbjct: 694 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 259/486 (53%), Gaps = 7/486 (1%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           ++EA+ + R +    ++P +   + L+NG   + +         EM+  GL  + +TY  
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LID    QGD+ +A  + DEM+  GIE  ++I+  L++G+C   KM +A  + + M E G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V P+  TY+ L++G+C+  ++ RA E   EM    L P V+T+ V+++GLC+ G L+   
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G+ PN  VY  L+  H K G + E+  +   M +  I PDVF YN LI G 
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C   ++E A   L +M +  +  N  TY + IDGY K G+ME A    ++M   GV PNV
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             +++LI+G CK GN+  A  ++  ++ + ++ DV  ++ LI GLS++G M E   ++ E
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           + E  + P+ FT +SLI G  K G +  A     E   K      +P+ V Y  +I  LC
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG----INPDIVTYNILIDGLC 681

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G+I +A  LF D+    L P+  TY  M+ G  ++K       LL +M+  G+ PDA 
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 741

Query: 545 INQVMV 550
           I  V++
Sbjct: 742 IYNVIL 747



 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 169/513 (32%), Positives = 271/513 (52%), Gaps = 12/513 (2%)

Query: 52  PSVF--STLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VF  ++LII F +   +EEA   L    +  + P      A ++G  K G+ +    +
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM+ CG++ +V  Y  LI+  C +G+V +A ++F  ++ + +   V  Y++LIHGL  
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             KM EA  +F  ++E G++PN +TYN+L+ G CK  +V++A +   EM    + P++VT
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 672

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+DGLCK GE+  A N F  +   G+ PN   Y  ++DG+CK+ N   A  L  EM 
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD F YN+++   C   + E A  L Q+M ++G  A+ V++N+LI+GYCK G ++
Sbjct: 733 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQ 791

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M EK   PN VT++SLID  CKAG +  A  L+ EM  ++++P    +T+L+
Sbjct: 792 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G    GNM E   L++EM+   I P   T   +I    + G +  A     E   K   
Sbjct: 852 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG-- 909

Query: 467 GYCSPNHVL-YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               P  V  Y A+IQALC   +  +  KL +++     R    T + + RG   A  M 
Sbjct: 910 ---MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMD 966

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +   +L  M+K G V +      +V G Q   +
Sbjct: 967 EAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGAN 999



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 211/406 (51%), Gaps = 4/406 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI    + G++ EA  V+R I    VL  +Q  + L++GL + GK    +  +
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+   GL+ +  TY  LI   C QG+V KA  L +EM  KGI P +V Y ILI GLC  
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A+++F  +   G+ PN  TY A++DGYCK  +   A +   EML   + P+   +
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V+++  CK  +   A + F  M + G F +   +N LI+G+CK+G L EA  L  EM +
Sbjct: 744 NVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 802

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +  P+  TY  LI   C  G +  A+ L  +M +  ++    TY SL+ GY   G+M +
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
             ++  +M  KG+EP+ +T+  +ID  C+ GN+  A  L  E+++K +   V  + ALI 
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L K     E L+L  E+ E+     + T S +  G    G +  A
Sbjct: 923 ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEA 968



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 232/462 (50%), Gaps = 4/462 (0%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           C    + V + +L+D     G +++A+N+F    +    P+++    L+  L   NK+  
Sbjct: 139 CNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 198

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              +F  M    V+P++YTY  ++  +CKV +V  A     EM      PN+VT+ V++ 
Sbjct: 199 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC+   L  A      M   G+ P+++ Y+ LI+G C      EA  +  EM    + P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TYN LI G    G +E A  +  +M   GI AN++ +N+L++G CK G MEKAL + 
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M EKGVEP+  T+S LI+G C+  N+  A  L  EM  + L P V+ ++ +I+GL + 
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           GN++ T  + +EM+   + P+    ++L+    K GR+  +    LE+  +       P+
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES-RMILERMREQG---ILPD 494

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y ++I   C   ++ +A     +M    LRP+  TY   + G  +A  M        
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 554

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +M+  G++P+  I   ++ G+ + G++  AF    F+   R+
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 199/428 (46%), Gaps = 40/428 (9%)

Query: 36   YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            +SVF  + S  + + +   +S LI   S  G + EA  ++ +++   +LP     N+L++
Sbjct: 585  FSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 93   GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD--------- 143
            G  K+G  D   +  EEM + G+  D+VTY +LID  C  G++ +A NLFD         
Sbjct: 644  GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703

Query: 144  --------------------------EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
                                      EM+ +G+ P   IY ++++  C E K  +A  +F
Sbjct: 704  NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763

Query: 178  RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            + M E G    + ++N L++GYCK   +  A     EM+     PN VT+  L+D  CK 
Sbjct: 764  QEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 822

Query: 238  GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            G +  A   ++ M +  V P    Y  L+ G+   GN+ E  +L  EM    I PD  TY
Sbjct: 823  GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 882

Query: 298  NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             ++I   C  G +  A  L  ++  +G+  +V  Y++LI   CK+ +  + L + +++ E
Sbjct: 883  YVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGE 942

Query: 358  KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             G    + T S +  G   AGN+D A  +   MV    V +      L+DG     N ++
Sbjct: 943  SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSED 1002

Query: 418  TLRLYKEM 425
            +  L K+M
Sbjct: 1003 SDNLLKQM 1010


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 186/583 (31%), Positives = 294/583 (50%), Gaps = 70/583 (12%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVW 104
           K  P  ++ LI  F   G IE+A  +  ++ V   I+A     N LLNG+ K GK +   
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEM-VACGIEANLIIWNTLLNGVCKAGKMEKAL 366

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E  +EM+  G+  D  TY +LI+  C   ++ +A  L DEM  + + PTV+ Y+++I+GL
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426

Query: 165 CN-----------------------------------ENKMVEAESMFRSMRECGVVPNL 189
           C                                    E ++ E+  +   MRE G++P++
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + YN+L+ G+CK   +  A  +  EML   L+PN  T+G  +DG  K GE+  A  +F  
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   GV PN+ +Y  LI+GHCK GN+ EA S+   +    +  DV TY++LI GL   G+
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A G+  ++ ++G+L N  TYNSLI G CK+G+++KA  +  +M  KG+ P++VT++ 
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG CKAG I+ A  L+ ++  + L P+ V + A++DG  K  N     +L +EML   
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG----------GYCS--------- 470
           + P  F  + +++   K  +   AL+ F E  +K             GYC          
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786

Query: 471 -----------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                      PNHV Y ++I   C  G + +A +L+ +M+  N+ P   TYT++L G  
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               M +V  L  +M+  GI PD +   VM+  Y   G++  A
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889



 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 196/618 (31%), Positives = 313/618 (50%), Gaps = 63/618 (10%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L N+  Y  A  LIK +  N   S  P  V  S+     S      N  +F  L+ ++ +
Sbjct: 111 LCNSNWYGPASDLIKCIIRN---SDSPLAVLGSIVKCYRSCNGSP-NSVIFDMLMDSYRK 166

Query: 65  MGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           MG + EA+ V+   +  E  P++ +CN+LL  L+K  K +  W+ ++ M    ++ DV T
Sbjct: 167 MGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYT 226

Query: 122 YGVLIDCCCGQGDVMKA----------LNLFDE-------MIDKGIEPTVVIYTILIHGL 164
           Y  +I   C  G+V  A            L DE       M+DKG+ P +  Y ILI+G 
Sbjct: 227 YTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 286

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E +  EA+ M   M + G+ P   TYNAL+DG+ +  D+ +A     EM+   ++ N+
Sbjct: 287 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 346

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           + +  L++G+CK G++  A      M + GV P+   Y+ LI+GHC+  N+  A  L  E
Sbjct: 347 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 406

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGA----------------------------EG- 315
           M+K +++P V TY+++I GLC  G L+G                             EG 
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466

Query: 316 ------LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                 +L++M ++GIL +V  YNSLI G+CK   ME+A +   +M E+ + PN  T+ +
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
            IDG  KAG ++ A   + EM+   ++P+V ++TALI+G  K+GN+ E   +++ +L  +
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +   V T S LIHGL +NG++  A   F E  +K       PN   Y ++I   C  G +
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG----LLPNAFTYNSLISGSCKQGNV 642

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            KAS+L  +M    + PD  TY  ++ GL +A  +     L  D+   G+ P+ V    M
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 550 VRGYQENGDLKSAFRCSE 567
           V GY ++ +  +AF+  E
Sbjct: 703 VDGYCKSKNPTAAFQLLE 720



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/494 (33%), Positives = 262/494 (53%), Gaps = 11/494 (2%)

Query: 64  EMGH----IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           EMG     ++EA+ + R +    ++P +   + L+NG   + +         EM+  GL 
Sbjct: 249 EMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 308

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            + +TY  LID    QGD+ +A  + DEM+  GIE  ++I+  L++G+C   KM +A  +
Sbjct: 309 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 368

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            + M E GV P+  TY+ L++G+C+  ++ RA E   EM    L P V+T+ V+++GLC+
Sbjct: 369 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 428

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G L+        M   G+ PN  VY  L+  H K G + E+  +   M +  I PDVF 
Sbjct: 429 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 488

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI G C   ++E A   L +M +  +  N  TY + IDGY K G+ME A    ++M 
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             GV PNV  +++LI+G CK GN+  A  ++  ++ + ++ DV  ++ LI GLS++G M 
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 608

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   ++ E+ E  + P+ FT +SLI G  K G +  A     E   K      +P+ V Y
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG----INPDIVTY 664

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I  LC  G+I +A  LF D+    L P+  TY  M+ G  ++K       LL +M+ 
Sbjct: 665 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724

Query: 537 MGIVPDAVINQVMV 550
            G+ PDA I  V++
Sbjct: 725 RGVPPDAFIYNVIL 738



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 221/414 (53%), Gaps = 39/414 (9%)

Query: 52  PSVF--STLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VF  ++LII F +   +EEA   L    +  + P      A ++G  K G+ +    +
Sbjct: 484 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 543

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM+ CG++ +V  Y  LI+  C +G+V +A ++F  ++ + +   V  Y++LIHGL  
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             KM EA  +F  ++E G++PN +TYN+L+ G CK  +V++A +   EM    + P++VT
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM- 285
           + +L+DGLCK GE+  A N F  +   G+ PN   Y  ++DG+CK+ N   A  L  EM 
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723

Query: 286 ---------------------EKFEISPDVF------------TYNILIKGLCGVGQLEG 312
                                EKFE + D+F            ++N LI+G C  G+L+ 
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQE 783

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  LL++M ++  + N VTY SLID  CK G M +A  +  +M E+ V P   T++SL+ 
Sbjct: 784 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 843

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           G    GN+     L+ EMV K + PD + +  +ID   ++GN+ E  +L  E+L
Sbjct: 844 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 208/403 (51%), Gaps = 12/403 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI    + G++ EA  V+R I    VL  +Q  + L++GL + GK    +  +
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+   GL+ +  TY  LI   C QG+V KA  L +EM  KGI P +V Y ILI GLC  
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A+++F  +   G+ PN  TY A++DGYCK  +   A +   EML   + P+   +
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V+++  CK  +   A + F  M + G F +   +N LI+G+CK+G L EA  L  EM +
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +  P+  TY  LI   C  G +  A+ L  +M +  ++    TY SL+ GY   G+M +
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF----- 402
             ++  +M  KG+EP+ +T+  +ID  C+ GN+  A  L  E+++K + P    F     
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGFRLGLP 912

Query: 403 --TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             + +  G    GNM E   + + M++     +  ++  L+ G
Sbjct: 913 TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 235/476 (49%), Gaps = 21/476 (4%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           C    + V + +L+D     G +++A+N+F    +    P+++    L+  L   NK+  
Sbjct: 148 CNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 207

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADV-----------------NRALEFYHEM 215
              +F  M    V+P++YTY  ++  +CKV +V                 + A+E    M
Sbjct: 208 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSM 267

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +   L P++ T+ +L++G C     R A    + M   G+ P    YN LIDG  + G++
Sbjct: 268 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 327

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  +  EM    I  ++  +N L+ G+C  G++E A  ++Q+M ++G+  +  TY+ L
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G+C+  +M +A  +  +M ++ + P V+T+S +I+G C+ GN+     +  EMV+  L
Sbjct: 388 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 447

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ VV+T L+   +K+G ++E+  + + M E  I P VF  +SLI G  K  R+  A  
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           + +E  ++       PN   Y A I      G++  A + F++M S  + P+   YT ++
Sbjct: 508 YLMEMLERR----LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            G  +   + +   +   ++   ++ D     V++ G   NG +  AF     L+E
Sbjct: 564 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 619



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 21/440 (4%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  VI+ +L+        +VEA ++F   +     P+L + N+L+    K   V    + 
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF-----------------G 254
           +  M  H + P+V T+  ++   CKVG ++ A    + M +                  G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+++ Y+ LI+G C      EA  +  EM    + P+  TYN LI G    G +E A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +  +M   GI AN++ +N+L++G CK G MEKAL +  +M EKGVEP+  T+S LI+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+  N+  A  L  EM  + L P V+ ++ +I+GL + GN++ T  + +EM+   + P+ 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              ++L+    K GR+  +    LE+  +       P+   Y ++I   C   ++ +A  
Sbjct: 452 VVYTTLMTAHAKEGRVEES-RMILERMREQG---ILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
              +M    LRP+  TY   + G  +A  M        +M+  G++P+  I   ++ G+ 
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G++  AF    F+   R+
Sbjct: 568 KEGNVTEAFSVFRFILSRRV 587



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 184/400 (46%), Gaps = 46/400 (11%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           +SVF  + S  + + +   +S LI   S  G + EA  ++ +++   +LP     N+L++
Sbjct: 576 FSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  K+G  D   +  EEM + G+  D+VTY +LID  C  G++ +A NLFD++  +G+ P
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V Y  ++ G C       A  +   M   GV P+ + YN +++  CK     +AL+ +
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EML      + V+F  L++G CK G+L+ A +    M +    PN   Y  LID +CKA
Sbjct: 755 QEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 813

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA  L  EM++  + P   TY  L+ G   +G +     L ++M  +GI  + +TY
Sbjct: 814 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 873

Query: 333 NSLIDGYCKEGD-----------------------------------------MEKALSV 351
             +ID YC+EG+                                         M++A  V
Sbjct: 874 YVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEV 933

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
              M + G   N  +   L+DG     N + +  L  +M 
Sbjct: 934 LRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/566 (32%), Positives = 300/566 (53%), Gaps = 10/566 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLE-IPKFNPSVFSTLI 59
           I +++  A++Y +A   +K+V  N  +      VC ++F+ L S   I      VF  L 
Sbjct: 110 IVHLVFRARMYTDAHDTVKEVIMNS-RMDMGFPVC-NIFDMLWSTRNICVSGSGVFDVLF 167

Query: 60  IAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             F E+G +EEA   +   R    LP  ++CN LL+ L K G    V +F+ +M+  G+ 
Sbjct: 168 SVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIA 227

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
             V TY V+ID  C +GD+  +  LF +M + G+ P VV Y  LI G      + E  S+
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F  M++ G VP++ TYN L++ YCK   + RA E++ EM ++ L+PNVVT+  L+D  CK
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G ++ A      M + G+ PN F Y  LID +CKAGNL EA  L ++M +  +  ++ T
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  L+ GLC  G++  AE + + M K+GI  N   Y +L+ GY K   ME A+ +  QMT
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E  ++P+++ + S+I G C    ++    +  EM  + +  + V+ T +ID   K G   
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + L  ++EM +  +  ++ T   LI GL + G +  A+++F             PN  +Y
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG----LQPNVAVY 583

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            ++I  LC +  I  A KLF +M+   + PD   +T ++ G L+   + + ++L++ M +
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
           + I  D  +   +V G+ + G+L  A
Sbjct: 644 LAIEFDLHVYTSLVSGFSQCGELHQA 669



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 259/492 (52%), Gaps = 9/492 (1%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSVF+   +I    + G +E +  ++   R++ + P +   N+L++G  K G  + V   
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G V D++TY  LI+C C    + +A   F EM + G++P VV Y+ LI   C 
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E  M  A  +   MR  G++PN +TY +L+D  CK  ++  A +  ++ML   ++ N+VT
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DGLCK G +  A   F  M K G+ PN  VY  L+ G+ KA  + +AM +  +M 
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  I PD+  Y  +I G C   +LE  + +L++M   GI AN V   ++ID Y K G   
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL+   +M + GVE  +VT+  LIDG C+AG ++ A+  +  M+   L P+V V+T+LI
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL  +  ++   +L+ EM    +TP +   ++LI G  K+G +  AL      T+    
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA-- 645

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                +  +Y +++      G++ +A K F++M    + P+      +LR   +  ++ +
Sbjct: 646 --IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703

Query: 527 VMMLLADMIKMG 538
            + L  +M +M 
Sbjct: 704 AIELKNEMERMA 715



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 2/216 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R I   P I     +++   K GK      F++EM   G+ A +VTY VLID  C  G V
Sbjct: 504 RGISANPVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A++ F  M+  G++P V +YT LI GLC  N +  A+ +F  M+  G+ P++  + AL
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG  K  ++  AL     M    ++ ++  +  L+ G  + GEL  A  FF  M + G+
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            P   +  CL+  + K G L EA+ L +EME+   S
Sbjct: 682 LPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYS 717


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 300/565 (53%), Gaps = 11/565 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L  A+ Y +A  ++K++    L+   P    + +  A  ++ +P F   VF  L  
Sbjct: 138 LVHILFCARFYSDANAVLKELI--CLRRVLPSWDVFDLLWATRNVCVPGF--GVFDALFS 193

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  E+G +EEA   +   RK  V P  ++CNALL+ L K G+ D   +F+++M   G+  
Sbjct: 194 ALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKR 253

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            V TY ++ID  C +GD+  A +LF +M + G  P +V Y  LI G      + E   +F
Sbjct: 254 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF 313

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M++    P++ TYNAL++ +CK   + +A EF HEM  + L+PNVVT+   +D  CK 
Sbjct: 314 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 373

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L+ A  FFV M +  + PN F Y  LID +CKAGNL EA+ L  E+ +  I  +V TY
Sbjct: 374 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 433

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+ GLC  G+++ AE + + M   G+  N  TY +L+ G+ K  +ME A  +  +M E
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K ++P+++ + +++ G C    ++ A  L  E+    +  + V++T L+D   K G   E
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L L +EML+  +  +  T  +LI GL K+G +  A++ F   ++        PN  +Y 
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG----LQPNVAVYT 609

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A++  LC +     A KLF +M    + PD   YT ++ G ++   + + + L   MI++
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 669

Query: 538 GIVPDAVINQVMVRGYQENGDLKSA 562
           G+  D      ++ G   +G ++ A
Sbjct: 670 GMELDLHAYTALIWGLSHSGQVQKA 694



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/459 (33%), Positives = 236/459 (51%), Gaps = 4/459 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N+L++G  K G  D     +E+M       DV+TY  LI+C C    + KA   
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM   G++P VV Y+  I   C E  + EA   F  MR   + PN +TY +L+D  CK
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             ++  AL+   E+L   ++ NVVT+  L+DGLC+ G ++ A   F  M   GV PN   
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+ G  KA  +  A  +  EM++  I PD+  Y  ++ GLC   +LE A+ L+ ++ 
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + GI  N V Y +L+D Y K G   +AL++  +M + G+    VT+ +LIDG CK+G + 
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM  +  M    L P+V V+TAL+DGL K+   +   +L+ EML+  + P     ++LI
Sbjct: 588 EAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  K+G +  ALN    +    + G     H  Y A+I  L + GQ+ KA  L  +M  
Sbjct: 648 DGNMKHGNLQEALNL---RDRMIEIGMELDLHA-YTALIWGLSHSGQVQKARNLLDEMIG 703

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             + PD   Y  +++      ++ + + L  +M K G++
Sbjct: 704 KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 238/455 (52%), Gaps = 9/455 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P +  +++LI    ++G ++E + ++ ++   +  P +   NAL+N   K  +    +
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           EF  EM   GL  +VVTY   ID  C +G + +A+  F +M    + P    YT LI   
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + EA  +   + + G+  N+ TY AL+DG C+   +  A E +  ML+  + PN 
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  L+ G  K  E+  A +    M +  + P++ +Y  ++ G C    L EA  L  E
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 525

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +++  I+ +   Y  L+      GQ   A  LL++M   G++A  VTY +LIDG CK G 
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGL 585

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A+    +M+E G++PNV  +++L+DG CK    + A  L+ EM+ K ++PD + +TA
Sbjct: 586 VQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG  K GN++E L L   M+E  +   +   ++LI GL  +G++  A N      D+ 
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL----DEM 701

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            G    P+ V+Y  +I+     G++ +A +L ++M
Sbjct: 702 IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 736



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 178/356 (50%), Gaps = 4/356 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P    F  L   L ++G L  A   F+ M KF VFP     N L+    K G    +   
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    I   VFTYNI+I  LC  G LE A  L  +M + G   ++VTYNSLIDG+ K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +++ + +  QM +   +P+V+T+++LI+  CK   +  A     EM    L P+VV 
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           ++  ID   K+G ++E ++ + +M    +TP+ FT +SLI    K G ++ AL    E  
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                     N V Y A++  LC +G++ +A ++F  M +  + P+  TYT ++ G ++A
Sbjct: 423 QAG----IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           K M     +L +M +  I PD ++   ++ G      L+ A      +KES I ++
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 42/400 (10%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLN 92
            F  L+ ++     P+V  +ST I AF + G ++EA+  +   R++ + P      +L++
Sbjct: 344 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 403

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
              K G      +  EE++  G+  +VVTY  L+D  C +G + +A  +F  M++ G+ P
Sbjct: 404 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463

Query: 153 TVVIYTILIHG-----------------------------------LCNENKMVEAESMF 177
               YT L+HG                                   LCNE+++ EA+ + 
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 523

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             ++E G+  N   Y  LMD Y K      AL    EML   L    VT+  L+DGLCK 
Sbjct: 524 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE-AMSLCSEMEKFEISPDVFT 296
           G ++ A + F  M++ G+ PN+ VY  L+DG CK  N FE A  L  EM    + PD   
Sbjct: 584 GLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK-NNCFEVAKKLFDEMLDKGMMPDKIA 642

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G    G L+ A  L  +M + G+  ++  Y +LI G    G ++KA ++  +M 
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 702

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            KGV P+ V +  LI      G +D A+ L  EM  + ++
Sbjct: 703 GKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 6/296 (2%)

Query: 38  VFNA-LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           VF A LN+   P  N   ++ L+  F +   +E A  + ++++   + P +     +L G
Sbjct: 452 VFRAMLNAGVAP--NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 509

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L  + + +       E+   G+  + V Y  L+D     G   +AL L +EM+D G+  T
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  LI GLC    + EA   F  M E G+ PN+  Y AL+DG CK      A + + 
Sbjct: 570 EVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFD 629

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML   + P+ + +  L+DG  K G L+ A N    M + G+  ++  Y  LI G   +G
Sbjct: 630 EMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSG 689

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            + +A +L  EM    + PD   Y  LIK    +G+++ A  L  +M K G++  +
Sbjct: 690 QVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGL 745


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 177/513 (34%), Positives = 269/513 (52%), Gaps = 14/513 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ ++ +    G    AL ++R    +  V P I   N ++NGL K  +  +  E +EE+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVVTY  LID  C  GD+ +A  L   M  +G  P VV Y++LI+GLC   ++
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 171 VEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ--PNVVT 226
            EA  + + M  + C V+PN+ TYN+ +DG CK +    A E    +   +L+  P+ VT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DGLCK G+   A N    M   G  PN+  YN L++G CKA  +  A ++   M 
Sbjct: 228 FSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++PDV TY++L+   C   +++ A  LL  M   G   NVVT+NS+IDG CK     
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  Q+  + + P+ VTF+ LI G CKAGN + A  L+ EMV K++ PDV+ F ALI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL K G ++    +   M    + P+V T + L+HGL K+GRI     F  E       
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG-- 463

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C P  + Y +++ ALC   +   A +L S ++S    PD  TY  ++ GL ++ +   
Sbjct: 464 --CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            + +L +M+  G  PD+        G   +G+L
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNL 554



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/509 (31%), Positives = 244/509 (47%), Gaps = 54/509 (10%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLF-DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           V  Y +++   C  G+  +AL +F  EM   G+ PT+V Y  +I+GLC  N++     +F
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             + + G  P++ TYN L+D  CK  D+  A   +  M      PNVVT+ VL++GLCKV
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 238 GELRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME--KFEISPD 293
           G +  A      M +    V PNI  YN  +DG CK     EA  L   +      +SPD
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T++ LI GLC  GQ +  E     M   G + NVVTYN+L++G CK   ME+A ++  
Sbjct: 225 TVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD- 412
            M +KGV P+V+T+S L+D  CKA  +D A+ L   M  +   P+VV F ++IDGL K  
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 413 ----------------------------------GNMKETLRLYKEMLEAKITPSVFTVS 438
                                             GN ++   L++EM+   + P V T  
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFG 402

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI GL K G++  A +      D        PN V Y  ++  LC  G+I +  +   +
Sbjct: 403 ALIDGLCKAGQVEAARDIL----DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M S    P++ TY +++  L RA R  D + L++ +   G  PD V   ++V G  ++G 
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 559 LKSAFRCSEFLKESRIGSSETEGHTTRSF 587
            + A      + E  +G    +GH   SF
Sbjct: 519 TEQAIT----VLEEMVG----KGHQPDSF 539



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/432 (35%), Positives = 221/432 (51%), Gaps = 16/432 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   +S LI    ++G I+EA  + +++     +VLP I   N+ L+GL K+       E
Sbjct: 150 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 209

Query: 106 FYEEMVLCGL--VADVVTYGVLID--CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
               +    L    D VT+  LID  C CGQ D  +A N  D+MI  G  P VV Y  L+
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD--EACN--DDMIAGGYVPNVVTYNALV 265

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           +GLC  +KM  A +M  SM + GV P++ TY+ L+D +CK + V+ ALE  H M      
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVVTF  ++DGLCK      A    + +    + P+   +N LI G CKAGN  +A +L
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    + PDV T+  LI GLC  GQ+E A  +L  M   G+  NVVTYN L+ G CK
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+      +M   G  P  +T+ SL+   C+A   D A+ L +++      PD V 
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVT 505

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---L 458
           +  L+DGL K G  ++ + + +EM+     P  FT ++   GL ++G ++  +      L
Sbjct: 506 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL 565

Query: 459 EKTDKTDGGYCS 470
            K    D   CS
Sbjct: 566 AKGMLPDATTCS 577



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 1/355 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWV-YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
            FSTLI    + G  +EA          +P +   NAL+NGL K  K +      E MV 
Sbjct: 227 TFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVD 286

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  DV+TY VL+D  C    V +AL L   M  +G  P VV +  +I GLC  ++  E
Sbjct: 287 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 346

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +   +    +VP+  T+N L+ G CK  +  +A   + EM+  N+QP+V+TFG L+D
Sbjct: 347 AFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALID 406

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK G++ AA +    M   GV PN+  YN L+ G CK+G + E      EM      P
Sbjct: 407 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVP 466

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TY  L+  LC   + + A  L+ K+   G   + VTYN L+DG  K G  E+A++V 
Sbjct: 467 ESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 526

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            +M  KG +P+  TF++   G  ++GN+   M L   ++ K ++PD    ++++D
Sbjct: 527 EEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 190/420 (45%), Gaps = 76/420 (18%)

Query: 223 NVVTFGVLMDGLCKVGEL-RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           +V  + +++  LC+ GE  RA   F   MA+ GV P I  YN +I+G CK+  L   M L
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             E+ K    PDV TYN LI  LC  G LE A  L   M   G + NVVTY+ LI+G CK
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 342 EGDMEKALSVCSQMTEKG---------------------------------------VEP 362
            G +++A  +  +MT K                                        V P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + VTFS+LIDG CK G  D A     +M+    VP+VV + AL++GL K   M+    + 
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---------------------LEKT 461
           + M++  +TP V T S L+    K  R+  AL                        L K+
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 462 DKTDGGY----------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           D++   +            P+ V +  +I   C  G   +AS LF +M + N++PD  T+
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             ++ GL +A ++     +L  M  +G+ P+ V   V+V G  ++G ++      EFL+E
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEP---CEFLEE 458



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 141/266 (53%), Gaps = 7/266 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGA-EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           S  V  YNI+++ LC  G+   A E    +M ++G+   +VTYN++I+G CK  ++   +
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  ++ ++G  P+VVT+++LID  CKAG+++ A  L+  M  +  VP+VV ++ LI+GL
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 410 SKDGNMKETLRLYKEMLEAK--ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            K G + E   L +EM      + P++ T +S + GL K    + A        D +   
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-- 219

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SP+ V ++ +I  LC  GQ  +A     DM +    P+  TY  ++ GL +A +M   
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERA 277

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGY 553
             ++  M+  G+ PD +   V+V  +
Sbjct: 278 HAMIESMVDKGVTPDVITYSVLVDAF 303


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 175/542 (32%), Positives = 275/542 (50%), Gaps = 41/542 (7%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP 82
           E LL++R+    C+ + N       P   P+VF+  ++                      
Sbjct: 32  EALLRARRIDETCHILKNGWP----PGITPNVFTYAVV---------------------- 65

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
                   + GL K G  D   E  EEM   G V D   Y  +I   C   +  KAL+ F
Sbjct: 66  --------IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF 117

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M     E  V+ +TI+I GLC  N++ EA + F  M++ G VPN +TYN L++G+CKV
Sbjct: 118 RSM---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKV 174

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V+RA     EM    L PNVVT+  ++ G C+  ++  A   F  M + G  PN+  Y
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N L+ G C+ G + EA  L  EM +  + PD F+Y+ L+ GLC  G+++ A  + +    
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
                +VV Y++LI G CK G +++A  +  +M E   EP+VVTF++L+DG CK   +  
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  +   M  ++  P+V+ +++LIDGL K G +++   ++K M+   I P+V T +SLIH
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G      + +AL   +E+   T    C P+ + Y  +I  LC  G+  +A++LF DM++ 
Sbjct: 415 GFCMTNGVDSAL-LLMEEMTATG---CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              PD  TY+ ++ G  + +R+     L  DM+K  ++PD V    +V GY   G +  A
Sbjct: 471 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 530

Query: 563 FR 564
            R
Sbjct: 531 ER 532



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 186/570 (32%), Positives = 285/570 (50%), Gaps = 11/570 (1%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV 80
           V + L KS      C  +     S  +P  + ++++ +I A  +  +  +AL  +R +E 
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVP--DAAIYNFVIHALCKARNTAKALDYFRSMEC 122

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
              +     +++GL K  +      ++ +M   G V +  TY VLI+  C    V +A  
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L  EM + G+ P VV Y+ +IHG C + K+  A  +FR M E G +PNL TYN L+ G C
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   ++ A E   EM    LQP+  ++  LM GLCK G++  A   F   +     P++ 
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ LI G CKAG L EA  L  +M +    PDV T+  L+ GLC   +L+ A+ +L+ M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                  NV+TY+SLIDG CK G +  A  V  +M  +G+EPNVVT++SLI G C    +
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D+A+ L  EM     +PD++ +  LIDGL K G   E  RL+ +M      P V T S L
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  K  RI  A   F    D        P+ V ++ +++  C  G +  A +L  +M 
Sbjct: 483 IGGFCKLERIDMARTLF----DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           + +  PD  TYT+++ G  +  RM++   +L  M K G  P+ V    ++  +   G   
Sbjct: 539 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598

Query: 561 SAFRCSEFLKESRIGSS-ETEGHTTRSFLG 589
            A+R    L E  +G+  +    T RS +G
Sbjct: 599 VAYR----LLEEMVGNGVQPNVITYRSLIG 624



 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 172/572 (30%), Positives = 273/572 (47%), Gaps = 49/572 (8%)

Query: 33  HVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC 87
           H  +  +  L  ++     P+V  +ST+I  F     ++ A  ++R++     +P +   
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N LL+GL + G  D  +E  +EM   GL  D  +Y  L+   C  G +  AL +F++  +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
               P VV Y+ LI GLC   ++ EA  +F  MRE    P++ T+ ALMDG CK   +  
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF------------------VH 249
           A +    M   N  PNV+T+  L+DGLCK G++R A   F                  +H
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 250 -----------------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
                            M   G  P+I  YN LIDG CK G   EA  L  +M+    +P
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 474

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV TY+ LI G C + +++ A  L   M K+ +L +VVT+++L++GYC  G ++ A  + 
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 534

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M      P+V T++SL+DG CK G +  A  +   M  +   P+VV +TALID   + 
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G      RL +EM+   + P+V T  SLI G    G +  A    LE+ ++ +   C  +
Sbjct: 595 GKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK-ILERLERDEN--CKAD 651

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  ++  LC  G++  A +L   ++     P +  Y  ++RGL + K +   M +L 
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711

Query: 533 DM-IKMGIVP-----DAVINQVMVRGYQENGD 558
           +M +     P     +AVI ++   G  E  +
Sbjct: 712 EMTLSRKSRPNAEAYEAVIQELAREGRHEEAN 743



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 236/451 (52%), Gaps = 7/451 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   +V TY  L +       + +  ++       GI P V  Y ++I GLC    + +A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +   MRE G VP+   YN ++   CK  +  +AL+++  M     + NV+T+ +++DG
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDG 135

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCK   L  A  +F  M K G  PN + YN LI+G CK   +  A  L  EM++  ++P+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TY+ +I G C   +++ A  L ++M + G + N+VTYN+L+ G C+ G M++A  +  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M E+G++P+  ++ +L+ G CK G ID A+ ++ +       PDVV ++ LI GL K G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + E  +L+++M E    P V T ++L+ GL K  R+  A        D+     C+PN 
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN----CTPNV 371

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y+++I  LC  GQ+  A ++F  M    + P+  TY +++ G      +   ++L+ +
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M   G +PD +    ++ G  + G    A R
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANR 462



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 227/450 (50%), Gaps = 7/450 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI    + G ++EA  ++ K+      P +    AL++GL K  +     +  E M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +V+TY  LID  C  G V  A  +F  MI +GIEP VV Y  LIHG C  N +
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G +P++ TYN L+DG CK      A   + +M      P+V+T+  L
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK+  +  A   F  M K  V P++  ++ L++G+C AG + +A  L  EM   + 
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV+TY  L+ G C VG++  A  +L++M K G   NVVTY +LID +C+ G    A  
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGL 409
           +  +M   GV+PNV+T+ SLI G C  G+++ A  +   +   ++   D+  +  ++DGL
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G M   L L + + ++   P      +LI GL +   +  A+    E T        
Sbjct: 663 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS--- 719

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            PN   Y A+IQ L  +G+  +A+ L  ++
Sbjct: 720 RPNAEAYEAVIQELAREGRHEEANALADEL 749



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 198/382 (51%), Gaps = 7/382 (1%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           ++ G   N+YTYN L +   +   ++             + PNV T+ V++ GLCK G+L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M + G  P+  +YN +I   CKA N  +A+     M   E   +V T+ I+
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIM 132

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC   +L  A     KM K+G + N  TYN LI+G+CK   + +A  +  +M E G+
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            PNVVT+S++I G C+   +D A  L+ +MV    +P++V +  L+ GL ++G M E   
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  EM E  + P  F+  +L+ GL K G+I  AL  F + ++    G C P+ V Y+ +I
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN----GDCPPDVVAYSTLI 308

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC  G++ +A KLF  MR ++  PD  T+T ++ GL +  R+ +   +L  M      
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           P+ +    ++ G  + G ++ A
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDA 390



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 201/395 (50%), Gaps = 7/395 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK 96
           L ++E     P+V  +S+LI    + G + +A  V++++ V    P +   N+L++G   
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 418

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
               DS     EEM   G + D++TY  LID  C  G   +A  LF +M  K   P V+ 
Sbjct: 419 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 478

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ LI G C   ++  A ++F  M +  V+P++ T++ L++GYC    V+ A     EM+
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  P+V T+  L+DG CKVG +  A      MAK G  PN+  Y  LID  C+AG   
Sbjct: 539 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSL 335
            A  L  EM    + P+V TY  LI G CG G LE A  +L+++ + E   A++  Y  +
Sbjct: 599 VAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVM 658

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KS 394
           +DG C+ G M  AL +   + + G  P    + +LI G C+   +  AM +  EM + + 
Sbjct: 659 MDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRK 718

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
             P+   + A+I  L+++G  +E   L  E+L  K
Sbjct: 719 SRPNAEAYEAVIQELAREGRHEEANALADELLGNK 753



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 144/312 (46%), Gaps = 36/312 (11%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V+TYN L + L    +++    +L+  +  GI  NV TY  +I G CK GD++KA  + 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 353 SQMTEKGVEP--------------------------------NVVTFSSLIDGQCKAGNI 380
            +M E G  P                                NV+T++ +IDG CKA  +
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A   + +M  K  VP+   +  LI+G  K   +     L KEM E+ + P+V T S++
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG  +  ++  A   F +  +      C PN V Y  ++  LC +G + +A +L  +MR
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENG----CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L+PD  +Y T++ GL +  ++   + +  D       PD V    ++ G  + G L 
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 561 SAFRCSEFLKES 572
            A +  E ++E+
Sbjct: 319 EACKLFEKMREN 330


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 286/554 (51%), Gaps = 43/554 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K N   +  LI    ++G +E+A  ++ ++ ++   P IQ  N L+ G  K    +  +E
Sbjct: 369 KLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYE 428

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              E+    L A+    G +++  C  GD+ +A  LF EMI  G++P +VIYT ++ GL 
Sbjct: 429 LLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLV 488

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E +  EA  +   M++ G+ P+++ YN ++ G+CK   +     +  EM+   L+PNV 
Sbjct: 489 KEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVY 548

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN----------- 274
           T+G  + G C+ GE++AA   F+ M   G+ PN  +   LIDG+CK GN           
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608

Query: 275 ------------------------LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
                                   L EAM + SE+    + PDVFTY  LI  LC  G L
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L   M K+GI  N+VTYN+LI+G CK G++ KA  +   + EKG+  N VT+S++
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G CK+ N+  A  L+  M +  + PD  V+ ALIDG  K GN ++ L L+  M+E  I
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
             S    ++LI G FK G++  A     +  D     + +PNHV Y  +I+  C  G I 
Sbjct: 789 A-STPAFNALIDGFFKLGKLIEAYQLVEDMVDN----HITPNHVTYTILIEYHCTVGNIK 843

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF +M+  N+ P+  TYT++L G  R  R  ++  L  +M+  GI PD +   VMV
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903

Query: 551 RGYQENGDLKSAFR 564
             + + G+   A +
Sbjct: 904 DAHLKEGNWIKALK 917



 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 170/530 (32%), Positives = 272/530 (51%), Gaps = 7/530 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S +I      G ++EAL + R +    +LP       L++G  ++ +        
Sbjct: 266 NLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSML 325

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  D V Y  LI+    Q D+  A  + +EM  + I+     Y  LIHGLC  
Sbjct: 326 DEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKI 385

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +AE +F  M   G+ P++ TYN L++GY KV ++ +A E   E+   NL  N    
Sbjct: 386 GDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMC 445

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G +++GLC  G+L  A   F  M  +G+ PNI +Y  ++ G  K G   EA+ +   M+ 
Sbjct: 446 GAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +SPDVF YN +I G C  G++E  +  L +M  +G+  NV TY + I GYC+ G+M+ 
Sbjct: 506 QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQA 565

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     +M + G+ PN V  + LIDG CK GN   A   +  M+ + ++PDV   + LI 
Sbjct: 566 AERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIH 625

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GLSK+G ++E + ++ E+L+  + P VFT +SLI  L K G +  A     +   K    
Sbjct: 626 GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG--- 682

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             +PN V Y A+I  LC  G+I KA +LF  +    L  ++ TY+T++ G  ++  + + 
Sbjct: 683 -INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             L   M  +G+ PD+ +   ++ G  + G+ + A      + E  I S+
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST 791



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 189/641 (29%), Positives = 302/641 (47%), Gaps = 93/641 (14%)

Query: 4   VLANAKLYKNARCLIKDVTENLLKSRKPHHV-------CYSVFNALNSLEIPKFNPSVFS 56
           +L N+ L+ NA     +V E ++ +R PH         CY   N  +S         VF 
Sbjct: 116 ILCNSGLFGNA----ANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSV----VVFE 167

Query: 57  TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            LI  + + G + EA+ V+   +  E +  +  CN+L   L+K  + +  W+ Y+ M L 
Sbjct: 168 ILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGM-LG 226

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            +V DV TY  LI+  C  G V +  ++  +M +KG  P +V Y+++I GLC    + EA
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYC--------------------------------- 200
             + RSM   G++P+ Y Y  L+DG+C                                 
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346

Query: 201 --KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             K +D+  A +   EM    ++ N  T+  L+ GLCK+G+L  A + F  M   G+ P+
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPD 406

Query: 259 IFVYNCLIDGH-----------------------------------CKAGNLFEAMSLCS 283
           I  YNCLI+G+                                   C  G+L  A  L  
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM  + + P++  Y  ++KGL   G+ E A  +L  M  +G+  +V  YN++I G+CK G
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG 526

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ME+  S   +M  KG++PNV T+ + I G C+AG + AA   + EM+   + P+ V+ T
Sbjct: 527 KMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICT 586

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDG  KDGN  +    ++ ML+  + P V T S LIHGL KNG++  A+  F E  DK
Sbjct: 587 DLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK 646

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+   Y ++I  LC +G +  A +L  DM    + P+  TY  ++ GL +   
Sbjct: 647 G----LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +     L   + + G+  ++V    ++ GY ++ +L  AF+
Sbjct: 703 IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQ 743



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 217/407 (53%), Gaps = 4/407 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  + + LI  + + G+  +A   +R +    VLP +Q  + L++GL K GK       +
Sbjct: 581 NDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVF 640

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E++  GLV DV TY  LI   C +GD+  A  L D+M  KGI P +V Y  LI+GLC  
Sbjct: 641 SELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKL 700

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A  +F  + E G+  N  TY+ ++ GYCK A++  A + +H M    + P+   +
Sbjct: 701 GEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVY 760

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK G    A + F+ M + G+  +   +N LIDG  K G L EA  L  +M  
Sbjct: 761 CALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVD 819

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P+  TY ILI+  C VG ++ AE L  +M K  ++ NV+TY SL+ GY + G   +
Sbjct: 820 NHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSE 879

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
             S+  +M  +G++P+ + +S ++D   K GN   A+ L  +M+ + +     ++T LID
Sbjct: 880 MFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILID 939

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            L K  N+ E L++  E+ +     S+ T  +L+    + GR   AL
Sbjct: 940 ALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 37/373 (9%)

Query: 56  STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S LI   S+ G ++EA+ V+ ++    ++P +    +L++ L K+G   + +E +++M  
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  ++VTY  LI+  C  G++ KA  LFD + +KG+    V Y+ +I G C    + E
Sbjct: 681 KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTE 740

Query: 173 AESMFRSMRECGVVPNLYTY----------------------------------NALMDG 198
           A  +F  M+  GV P+ + Y                                  NAL+DG
Sbjct: 741 AFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDG 800

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K+  +  A +   +M+ +++ PN VT+ +L++  C VG ++ A   F+ M K  V PN
Sbjct: 801 FFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN 860

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  Y  L+ G+ + G   E  SL  EM    I PD   +++++      G    A  L+ 
Sbjct: 861 VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVD 920

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  EG+      Y  LID  CK  ++ + L V  ++ ++G + ++ T  +L+    +AG
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAG 980

Query: 379 NIDAAMGLYTEMV 391
             D A+ +   MV
Sbjct: 981 RTDEALRVLESMV 993



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 27/288 (9%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S ++ T++IL   LC  G    A  +L++M  +    +V   +S+I  Y           
Sbjct: 104 SQNLSTFSILSLILCNSGLFGNAANVLERMI-DTRNPHVKILDSIIKCY----------- 151

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              ++       +VV F  LID   K G ++ A+ ++    + +   + +V  A  + LS
Sbjct: 152 --KEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVF----LGAKTNEFIVGLACCNSLS 205

Query: 411 KD---GNMKETL-RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           KD   GN  E   ++YK ML A I P V+T ++LI+   + G++    +   +  +K   
Sbjct: 206 KDLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKG-- 262

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN V Y+ +I  LC  G + +A +L   M +  L PDN  Y T++ G  R KR  +
Sbjct: 263 --CIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              +L +M  MG+ PD V    ++ G+ +  D+  AF+  E +   +I
Sbjct: 321 GKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKI 368


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 183/540 (33%), Positives = 278/540 (51%), Gaps = 11/540 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+ + +  G ++E   VY ++   +V P I   N ++NG  K G  +   ++   +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  TY  LI   C + D+  A  +F EM  KG     V YT LIHGLC E ++ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M++    P + TY  L+   C     + AL    EM    ++PN+ T+ VL+
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LC   +L  A      M + G+ PN+  YN LI+G+CK G + +A+ +   ME   + 
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  TYN LIKG C    +  A G+L KM +  +L +VVTYNSLIDG C+ G+ + A  +
Sbjct: 426 PNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S M ++G+ P+  T++S+ID  CK+  ++ A  L+  +  K ++P+VV++TALIDG  K
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E   + ++ML     P+  T ++LIHGL  +G++  A     EK  K D     P
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA-TLLEEKMVKID---LQP 600

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
                  +I  L  DG    A + F  M S   +PD  TYTT ++   R  R+ D   ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMV 660

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           A M + G+ PD      +++GY + G   SAF     LK       E   HT  S + HL
Sbjct: 661 AKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV---VLKRMHDTGCEPSQHTFLSLIKHL 717



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 284/551 (51%), Gaps = 33/551 (5%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI-----KKGKF 100
           P++  SV+S  +L+      G++     V  KI +L  I++C+++ + L      +K   
Sbjct: 117 PRYKHSVYSYASLLTLLINNGYV----GVVFKIRLL-MIKSCDSVADTLFVLDLCRKMNK 171

Query: 101 DSVWEF-YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           D  +E  Y+ ++ C        Y  L++     G V +   ++ EM++  + P +  Y  
Sbjct: 172 DESFELKYKLIIGC--------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++G C    + EA      + E G+ P+ +TY +L+ GYC+  D++ A + + EM    
Sbjct: 224 MVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            + N V +  L+ GLC    +  A + FV M     +P +  Y  LI   C +    EA+
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L  EME+  I P++ TY +LI  LC   +LE A  LL +M ++G++ NV+TYN+LI+GY
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +E AL V   M  + + PN  T++ LI G CK  N+  AMG+  +M+ + ++PDV
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDV 462

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-- 457
           V + +LIDG  + GN     RL   M +  + P  +T +S+I  L K+ R+  A + F  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           LE+ D        PN V+Y A+I   C  G++ +A  +   M S N  P++ T+  ++ G
Sbjct: 523 LEQKDVI------PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHG 576

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           L    ++ +  +L   M+K+ + P    + +++    ++GD   A+R  + +  S    +
Sbjct: 577 LCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSS---GT 633

Query: 578 ETEGHTTRSFL 588
           + + HT  +F+
Sbjct: 634 KPDAHTYTTFI 644



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 251/531 (47%), Gaps = 26/531 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A        EAL + +++E   + P I     L++ L  + K +   E 
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +M+  GL+ +V+TY  LI+  C +G +  AL++ + M  + + P    Y  LI G C 
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            N + +A  +   M E  V+P++ TYN+L+DG C+  + + A      M    L P+  T
Sbjct: 441 RN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++D LCK   +  A + F  + +  V PN+ +Y  LIDG+CKAG + EA  +  +M 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                P+  T+N LI GLC  G+L+ A  L +KM K  +   V T   LI    K+GD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A     QM   G +P+  T+++ I   C+ G +  A  +  +M    + PD+  +++LI
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI-------HGLFKNGR-----ISNAL 454
            G    G       + K M +    PS  T  SLI       +G  K G      +SN +
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMM 739

Query: 455 NF--FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS-DNLRPDNCTY 511
            F   +E  +K      +PN   Y  ++  +C  G +  A K+F  M+  + + P    +
Sbjct: 740 EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-----AVINQVMVRGYQENG 557
             +L    + ++  +   ++ DMI +G +P       +I ++  +G +E G
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERG 850



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 197/413 (47%), Gaps = 23/413 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  + + G IE+AL V   +E   + P  +  N L+ G  K+    ++    
Sbjct: 392 NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG-VL 450

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+   ++ DVVTY  LID  C  G+   A  L   M D+G+ P    YT +I  LC  
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA  +F S+ +  V+PN+  Y AL+DGYCK   VN A     +ML  N  PN +TF
Sbjct: 511 KRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTF 570

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC  G+L+ A      M K  + P +     LI    K G+   A     +M  
Sbjct: 571 NALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLS 630

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PD  TY   I+  C  G+L+ AE ++ KM + G+  ++ TY+SLI GY   G    
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNS 690

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLID-------GQCKAG-----------NIDAAMGLYTE 389
           A  V  +M + G EP+  TF SLI        G+ K G             D  + L  +
Sbjct: 691 AFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEK 750

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLI 441
           MV   + P+   +  L+ G+ + GN++   +++  M + + I+PS    ++L+
Sbjct: 751 MVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 206/485 (42%), Gaps = 93/485 (19%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  + +  ++ +A+ V  K+   +VLP +   N+L++G  + G FDS +   
Sbjct: 427 NTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GLV D  TY  +ID  C    V +A +LFD +  K + P VV+YT LI G C  
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA  M   M     +PN  T+NAL+ G C    +  A     +M+  +LQP V T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+  L K G+   A   F  M   G  P+   Y   I  +C+ G L +A  + ++M++
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 288 FEISPDVFTYNILIKGLCGVGQ-------------------------------------L 310
             +SPD+FTY+ LIKG   +G+                                     +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKV 725

Query: 311 EGAEG----------------LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           +G E                 LL+KM + G+  N  +Y  L+ G C+ G++  A  V   
Sbjct: 726 KGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDH 785

Query: 355 MTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP---------------- 397
           M +K G+ P+ + F++L+   CK    + A  +  +M+    +P                
Sbjct: 786 MQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKG 845

Query: 398 -------------------DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
                              D + +  +IDG+ K G ++    L+  M +   T S  T S
Sbjct: 846 EKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYS 905

Query: 439 SLIHG 443
            LI G
Sbjct: 906 LLIEG 910


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 190/600 (31%), Positives = 306/600 (51%), Gaps = 25/600 (4%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV-FSTLIIA 61
           + L +++L+  A  L+  +   LL+   P  V +S F  L+S +  KF+ ++ F+ L+  
Sbjct: 111 HALVHSRLFWPANSLLHTL---LLRESHPKCV-FSHF--LDSYKRCKFSSTLGFNLLVQN 164

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +     I +A+ + + +    +LP ++  +ALLNGL+K  KF +VWE ++E V  G+  D
Sbjct: 165 YVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPD 224

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
             T   ++   C   D ++A      M   G + ++V Y +LIHGLC  +++ EA  + R
Sbjct: 225 PYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKR 284

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           S+   G+  ++ TY  L+ G+C++      ++   EM+     P       L+DGL K G
Sbjct: 285 SLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A    V + +FG  PN+FVYN LI+  CK G+L +A  L S M    + P+  TY+
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           ILI   C  G+L+ A     +M ++GI   V  YNSLI+G CK GD+  A S+  +MT K
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           GVEP   TF+SLI G CK   +  A  LY +M+   + P+V  FTALI GL     M E 
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L+ E++E KI P+  T + LI G  ++G+I  A     +   K       P+   Y  
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG----LVPDTYTYRP 580

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC  G++ KA     D+   N++ +   Y+ +L G  +  R+++ +    +MI+ G
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF-----------RCSEFLKESRIGSSETEGHTTRSF 587
           I  D V + V++ G  +  D K+ F           R    +  S I +   EG   ++F
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 269/520 (51%), Gaps = 10/520 (1%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F+P+    S L+    + G I++A  +  K+     +P +   NAL+N L K G  D   
Sbjct: 326 FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAE 385

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y  M L  L  + +TY +LID  C  G +  A++ FD MI  GI  TV  Y  LI+G 
Sbjct: 386 LLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQ 445

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    +  AES+F  M   GV P   T+ +L+ GYCK   V +A + Y++M+ + + PNV
Sbjct: 446 CKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNV 505

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF  L+ GLC   ++  A   F  + +  + P    YN LI+G+C+ G + +A  L  +
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  + PD +TY  LI GLC  G++  A+  +  ++K+ +  N + Y++L+ GYC+EG 
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +ALS   +M ++G+  ++V  + LIDG  K  +      L  +M  + L PD V++T+
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +ID  SK+G+ K+    +  M+  +  P+V T ++L++GL K G +  A   F     + 
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF----KRM 741

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN + Y   +  L  +G + +A  L   M    L  +  T+  ++RG  +  R 
Sbjct: 742 QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRF 800

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +   +L++M + GI PD V    ++  Y  +G++ ++ +
Sbjct: 801 HEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVK 840



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 255/495 (51%), Gaps = 8/495 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI +F   G ++ A+  + R I+  +   + A N+L+NG  K G   +    +
Sbjct: 399 NGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLF 458

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+     T+  LI   C    V KA  L+++MID GI P V  +T LI GLC+ 
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           NKM EA  +F  + E  + P   TYN L++GYC+   +++A E   +M    L P+  T+
Sbjct: 519 NKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTY 578

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC  G +  A +F   + K  V  N   Y+ L+ G+C+ G L EA+S   EM +
Sbjct: 579 RPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQ 638

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+ D+  + +LI G       +    LL+ M+ +G+  + V Y S+ID Y KEG  +K
Sbjct: 639 RGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKK 698

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A      M  +   PNVVT+++L++G CKAG +D A  L+  M   ++ P+ + +   +D
Sbjct: 699 AFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLD 758

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L+K+GNMKE + L+  ML+  +  +V T + +I G  K GR   A     E T+  +G 
Sbjct: 759 NLTKEGNMKEAIGLHHAMLKGLLANTV-THNIIIRGFCKLGRFHEATKVLSEMTE--NGI 815

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +  P+ V Y+ +I   C  G +  + KL+  M +  L PD   Y  ++ G      +   
Sbjct: 816 F--PDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKA 873

Query: 528 MMLLADMIKMGIVPD 542
             L  DM++ GI+PD
Sbjct: 874 FELRDDMLRRGIIPD 888



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 251/537 (46%), Gaps = 33/537 (6%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           +I   N L++GL K  +     E    +   GL ADVVTY  L+   C        + L 
Sbjct: 259 SIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLM 318

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           DEM++ G  PT    + L+ GL  + K+ +A  +   +   G VPNL+ YNAL++  CK 
Sbjct: 319 DEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKG 378

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            D+++A   Y  M   NL+PN +T+ +L+D  C+ G L  A ++F  M + G+   ++ Y
Sbjct: 379 GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+G CK G+L  A SL  EM    + P   T+  LI G C   Q++ A  L  KM  
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  NV T+ +LI G C    M +A  +  ++ E+ ++P  VT++ LI+G C+ G ID 
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L  +M  K LVPD   +  LI GL   G + +      ++ +  +  +    S+L+H
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618

Query: 443 GLFKNGRISNALN--------------------------------FFLEKTDKTDGGYCS 470
           G  + GR+  AL+                                FF    D  D G   
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL-R 677

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P++V+Y ++I     +G   KA + +  M ++   P+  TYT ++ GL +A  M    +L
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLL 737

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
              M    + P+++     +    + G++K A      + +  + ++ T     R F
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGF 794


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 184/548 (33%), Positives = 282/548 (51%), Gaps = 11/548 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+ + +  G ++E   VY ++   +V P I   N ++NG  K G  +   ++  ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  TY  LI   C + D+  A  +F+EM  KG     V YT LIHGLC   ++ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M++    P + TY  L+   C     + AL    EM    ++PN+ T+ VL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LC   +   A      M + G+ PN+  YN LI+G+CK G + +A+ +   ME  ++S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  TYN LIKG C    +  A G+L KM +  +L +VVTYNSLIDG C+ G+ + A  +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S M ++G+ P+  T++S+ID  CK+  ++ A  L+  +  K + P+VV++TALIDG  K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E   + ++ML     P+  T ++LIHGL  +G++  A     EK  K       P
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIG---LQP 600

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
                  +I  L  DG    A   F  M S   +PD  TYTT ++   R  R+LD   ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           A M + G+ PD      +++GY + G    AF   + LK  R    E   HT  S + HL
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF---DVLKRMRDTGCEPSQHTFLSLIKHL 717

Query: 592 KPTVYKEQ 599
               Y +Q
Sbjct: 718 LEMKYGKQ 725



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/585 (30%), Positives = 292/585 (49%), Gaps = 62/585 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-LWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ ++  + ++G++EEA  +V + +E  + P      +L+ G  ++   DS ++ +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM L G   + V Y  LI   C    + +A++LF +M D    PTV  YT+LI  LC  
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA ++ + M E G+ PN++TY  L+D  C      +A E   +ML   L PNV+T+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G CK G +  A +    M    + PN   YN LI G+CK+ N+ +AM + ++M +
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLE 455

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++ PDV TYN LI G C  G  + A  LL  M   G++ +  TY S+ID  CK   +E+
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   + +KGV PNVV +++LIDG CKAG +D A  +  +M+ K+ +P+ + F ALI 
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL  DG +KE   L ++M++  + P+V T + LIH L K+G   +A + F +        
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG--- 632

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG---------- 517
              P+   Y   IQ  C +G++L A  + + MR + + PD  TY+++++G          
Sbjct: 633 -TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691

Query: 518 LLRAKRMLD-------------------------------------------VMMLLADM 534
               KRM D                                           V+ LL  M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR-IGSSE 578
           ++  + P+A   + ++ G  E G+L+ A +  + ++ +  I  SE
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 285/549 (51%), Gaps = 29/549 (5%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI-----KKGKF 100
           P++  SV+S  +L+      G++     V  KI +L  I++C+++ + L      +K   
Sbjct: 117 PRYKHSVYSYASLLTLLINNGYV----GVVFKIRLL-MIKSCDSVGDALYVLDLCRKMNK 171

Query: 101 DSVWEF-YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           D  +E  Y+ ++ C        Y  L++     G V +   ++ EM++  + P +  Y  
Sbjct: 172 DERFELKYKLIIGC--------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++G C    + EA      + E G+ P+ +TY +L+ GYC+  D++ A + ++EM    
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            + N V +  L+ GLC    +  A + FV M     FP +  Y  LI   C +    EA+
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L  EME+  I P++ TY +LI  LC   + E A  LL +M ++G++ NV+TYN+LI+GY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +E A+ V   M  + + PN  T++ LI G CK+ N+  AMG+  +M+ + ++PDV
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDV 462

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + +LIDG  + GN     RL   M +  + P  +T +S+I  L K+ R+  A + F  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF-- 520

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D  +    +PN V+Y A+I   C  G++ +A  +   M S N  P++ T+  ++ GL 
Sbjct: 521 --DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
              ++ +  +L   M+K+G+ P    + +++    ++GD   A+  S F +    G ++ 
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY--SRFQQMLSSG-TKP 635

Query: 580 EGHTTRSFL 588
           + HT  +F+
Sbjct: 636 DAHTYTTFI 644



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 266/584 (45%), Gaps = 55/584 (9%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAI 84
            RK     + VFN +  L+  + N   ++ LI        I+EA+ ++ K+   E  P +
Sbjct: 265 QRKDLDSAFKVFNEM-PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           +    L+  L    +        +EM   G+  ++ TY VLID  C Q    KA  L  +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M++KG+ P V+ Y  LI+G C    + +A  +   M    + PN  TYN L+ GYCK ++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDG------------------------------- 233
           V++A+   ++ML   + P+VVT+  L+DG                               
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502

Query: 234 ----LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
               LCK   +  A + F  + + GV PN+ +Y  LIDG+CKAG + EA  +  +M    
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P+  T+N LI GLC  G+L+ A  L +KM K G+   V T   LI    K+GD + A 
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S   QM   G +P+  T+++ I   C+ G +  A  +  +M    + PD+  +++LI G 
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF--KNGR----------ISNALNF- 456
              G       + K M +    PS  T  SLI  L   K G+          +SN + F 
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742

Query: 457 -FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTM 514
             +E  +K      +PN   Y  +I  +C  G +  A K+F  M R++ + P    +  +
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           L    + K+  +   ++ DMI +G +P     +V++ G  + G+
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 29/497 (5%)

Query: 45  LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGK 99
           +E  K +P+   ++ LI  + +  ++ +A+ V  K+   +VLP +   N+L++G  + G 
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           FDS +     M   GLV D  TY  +ID  C    V +A +LFD +  KG+ P VV+YT 
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI G C   K+ EA  M   M     +PN  T+NAL+ G C    +  A     +M+   
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           LQP V T  +L+  L K G+   A + F  M   G  P+   Y   I  +C+ G L +A 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID-- 337
            + ++M +  +SPD+FTY+ LIKG   +GQ   A  +L++M   G   +  T+ SLI   
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717

Query: 338 ---GYCKEGDMEKALSVCS-------------QMTEKGVEPNVVTFSSLIDGQCKAGNID 381
               Y K+   E  L   S             +M E  V PN  ++  LI G C+ GN+ 
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777

Query: 382 AAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            A  ++  M   + + P  +VF AL+    K     E  ++  +M+     P + +   L
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL+K G      + F    +    GY   + + +  II  +   G +    +LF+ M 
Sbjct: 838 ICGLYKKGEKERGTSVF---QNLLQCGYYE-DELAWKIIIDGVGKQGLVEAFYELFNVME 893

Query: 501 SDNLRPDNCTYTTMLRG 517
            +  +  + TY+ ++ G
Sbjct: 894 KNGCKFSSQTYSLLIEG 910



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 199/446 (44%), Gaps = 39/446 (8%)

Query: 13  NARCLIKD------VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSE 64
           N R L+ D      + ++L KS++    C    +  +SLE    NP+V  ++ LI  + +
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEAC----DLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
            G ++EA  +  K+     LP     NAL++GL   GK        E+MV  GL   V T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
             +LI      GD   A + F +M+  G +P    YT  I   C E ++++AE M   MR
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           E GV P+L+TY++L+ GY  +   N A +    M     +P+  TF  L+  L ++   +
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE---AMSLCSEMEKFEISPDVFTYN 298
             G+           P +          C   N+ E    + L  +M +  ++P+  +Y 
Sbjct: 725 QKGSE----------PEL----------CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYE 764

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            LI G+C VG L  AE +   M + EGI  + + +N+L+   CK     +A  V   M  
Sbjct: 765 KLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P + +   LI G  K G  +    ++  ++      D + +  +IDG+ K G ++ 
Sbjct: 825 VGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHG 443
              L+  M +     S  T S LI G
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 261/485 (53%), Gaps = 6/485 (1%)

Query: 86   ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
             CN LL  L++  +     + Y   + C    ++ T+ +LI   C  GD+  A  L  EM
Sbjct: 846  TCNCLLQALLRLKRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAGDIGTAYELLKEM 903

Query: 146  IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP-NLYTYNALMDGYCKVAD 204
               G+   V+++ ++I GLC+  K+  A  +F+ M E G  P +++TY+ ++D   K   
Sbjct: 904  PRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGK 963

Query: 205  VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            V+ A     +M+     PNVVT+  L+ GLCK G+L  A      M + G  PNI  YN 
Sbjct: 964  VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023

Query: 265  LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            +IDGHCK G + EA  L  EM      P+V TY +L+   C  G+ E A GL++ M ++G
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083

Query: 325  ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
             + N+ TYNSL+D +CK+ ++E+A  + S M +KG  PNVV+++++I G CKA  +   +
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 385  GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
             L  +M+  + VPD+V F  +ID + K   +     L+  + E+  TP++ T +SL+HGL
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203

Query: 445  FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             K+ R   A     E T K     CSP+ + Y  +I  LC   ++ +A KLF  M SD L
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQG---CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 505  RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             PD+ TY+ ++  L + + M +   +L  M+K G  P A+    ++ G+ + G+L  A  
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 565  CSEFL 569
              + L
Sbjct: 1321 ILQLL 1325



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 270/527 (51%), Gaps = 7/527 (1%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNG 93
           Y +F+ +N   + K +  V  +++    + G   +A+  +R++     P     N ++NG
Sbjct: 181 YELFDEMNRKGL-KAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMING 239

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  + D      EEMV  G   +V +Y  ++   C    V  AL L ++M+ +G  P 
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV YT +I+GLC  +++ EA  +   M + G  PN+ TY  L+DG+C+V D++ A+E   
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M     +PN +T+  +M   C+  ++  A      M + G  P+   Y+ +I G CKAG
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L EA  L  +M +    PDV   + LI  LC    ++ A+ LL+         +VV Y+
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            LI   CK   + +A S    M +    P+VVT++S++DG CK+  I+ A  L+  M   
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            ++PDVV ++ +I    KD N+    ++ + M EAK  P V T S+LI+GL K G +  A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            + F E      G  C+PN V Y  +I  LC   ++ +A+++   MR  +  PD+ TYT 
Sbjct: 600 FDVFQEML----GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           ++ GL  A R+ +   +L +M   G +PD +    ++R  Q+  +L+
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/577 (30%), Positives = 277/577 (48%), Gaps = 25/577 (4%)

Query: 33   HVCYSVFNALNSLEIPK-------------FNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
            + C  +  AL  L+ PK              N   F+ LI      G I  A  + +++ 
Sbjct: 845  YTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMP 904

Query: 80   VLPAIQAC---NALLNGLIKKGKFDSVWEFYEEMVLCG-LVADVVTYGVLIDCCCGQGDV 135
                 Q     N ++ GL    K DS  E ++EM   G    DV TY  ++D     G V
Sbjct: 905  RHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 964

Query: 136  MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
              A  L ++M+ KG  P VV Y+ L+HGLC   K+ EA ++ + M   G  PN+ TYN +
Sbjct: 965  DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            +DG+CK+  ++ A     EM+    QPNVVT+ VL+D  CK G+   A      M + G 
Sbjct: 1025 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 1084

Query: 256  FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             PN+F YN L+D  CK   +  A  L S M +    P+V +YN +I GLC   ++     
Sbjct: 1085 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 316  LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            LL++M     + ++VT+N++ID  CK   ++ A  + + + E G  PN+VT++SL+ G C
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 376  KAGNIDAAMGLYTEMVIKS-LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K+   D A  L  EM  K    PD++ +  +IDGL K   +    +L+ +ML   + P  
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             T S +I  L K  R  +  N  LE   K   G+  P  + Y  +I   C  G + KA +
Sbjct: 1265 VTYSIVISSLCK-WRFMDEANNVLELMLKN--GF-DPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 495  LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            +   + S    PD  T++  +  L +  R+     LL  M++ G+VPD V    +++G+ 
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 555  ENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            +    + A    E +++      E +  T  + +GHL
Sbjct: 1381 DASLTEDAVDLFEVMRQC---GCEPDNATYTTLVGHL 1414



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 247/484 (51%), Gaps = 7/484 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I   S+   +++A+ +  ++      P + + N +L+G  K  + ++     E+M
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVV+Y  +I+  C    V +A  + D+MI +G +P V+ Y  L+ G C    +
Sbjct: 292 VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 351

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  + R M E G  PN  TYN +M  +C+  D+ RA +    M+     P+ + +  +
Sbjct: 352 DGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTI 411

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK G+LR A +    M + G  P++   + LID  CKA  +  A  L       + 
Sbjct: 412 ISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDC 471

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PDV  Y+ILI  LC   +L  AE  L  M K     +VVTYNS++DG CK   +  A  
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFL 531

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   GV P+VVT+S +I   CK  N+D+A  +   M     VPDVV ++ALI+GL 
Sbjct: 532 LFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLC 591

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + +   +++EML     P++ T ++LI GL K  ++  A    LE   K     C+
Sbjct: 592 KAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE-MLEIMRKQS---CT 647

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y  +I  LC   ++ +A ++  +M+     PD  TY T+LR L +   +  V  L
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707

Query: 531 LADM 534
           L +M
Sbjct: 708 LKEM 711



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 232/491 (47%), Gaps = 5/491 (1%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W   +      I  CN LLN L+K  ++    + +   +      D VTY  LI      
Sbjct: 115 WAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRA 174

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G ++ A  LFDEM  KG++    ++  ++ GLC+  +  +A   FR M +    P+  TY
Sbjct: 175 GKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTY 233

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N +++G  K   ++ A+    EM+ +   PNV ++  ++ G CK   +  A      M  
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P++  Y  +I+G CK   + EA  +  +M +    P+V TY  L+ G C VG L+G
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L++KM + G   N +TYN+++  +C+  DME+A  V   M + G  P+ + +S++I 
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKAG +  A  L  +M+ +   PDV   + LID L K   +     L +  +     P
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V   S LIH L K  R+  A ++     D      C P+ V Y +++  LC   +I  A
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWL----DVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             LF  MR+  + PD  TY+ ++    +   +     +L  M +   VPD V    ++ G
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589

Query: 553 YQENGDLKSAF 563
             + G +  AF
Sbjct: 590 LCKAGTVDKAF 600



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 224/437 (51%), Gaps = 5/437 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A +LF   I+       V Y+ LI G     K++ A  +F  M   G+  +   + +++
Sbjct: 144 QAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSIL 203

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C     + A+  + EM      P+ VT+  +++GL K   L  A      M   G  
Sbjct: 204 RGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 262

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN+F YN ++ G CKA  +  A+ L  +M      PDV +Y  +I GLC + Q++ A  +
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + KM + G   NV+TY +L+DG+C+ GD++ A+ +  +MTE+G  PN +T+++++   C+
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
             +++ A  +   M+     PD + ++ +I G  K G ++E   L ++M+     P V  
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           +S+LI  L K   I +A            G  C+P+ V Y+ +I ALC   ++ +A    
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSI----GMDCAPDVVAYSILIHALCKAKRLPEAESWL 498

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M  +   PD  TY +++ GL +++R+ D  +L   M   G++PD V   +++  + ++
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558

Query: 557 GDLKSAFRCSEFLKESR 573
            +L SAF+  E +KE++
Sbjct: 559 NNLDSAFKMLERMKEAK 575



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 224/473 (47%), Gaps = 40/473 (8%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F P+VFS  T++  F +   +E ALW+  ++      P + +   ++NGL K  + D   
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++M+  G   +V+TYG L+D  C  GD+  A+ L  +M ++G  P  + Y  ++H  
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  N M  A  + + M + G  P+   Y+ ++ G+CK   +  A +   +M+    +P+V
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440

Query: 225 VTFGVLMDGLCKVGELRAAG------------------NFFVH----------------- 249
                L+D LCK   + +A                   +  +H                 
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M K   +P++  YN ++DG CK+  + +A  L   M    + PDV TY+I+I   C    
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L+ A  +L++M +   + +VVTY++LI+G CK G ++KA  V  +M   G  PN+VT+++
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG CK   ++ A  +   M  +S  PD + +T LI+GL     ++E  R+ +EM +  
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             P   T  +L+  L K   +        E     +G + +    L+  +I+ 
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 253/543 (46%), Gaps = 35/543 (6%)

Query: 50   FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            + P++F+  +L+  F +   +E A  +   +     +P + + N ++ GL K  K     
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 105  EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               E+M+    V D+VT+  +ID  C    V  A  LF+ + + G  P +V Y  L+HGL
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203

Query: 165  CNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C   +  +AE + R M R+ G  P++ TYN ++DG CK   V+RA + + +ML   L P+
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 1263

Query: 224  VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             VT+ +++  LCK   +  A N    M K G  P    Y  LIDG CK GNL +A+ +  
Sbjct: 1264 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323

Query: 284  EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
             +      PDV T++I I  L   G+L  A  LL+ M + G++ + VTYN+L+ G+C   
Sbjct: 1324 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 1383

Query: 344  DMEKALSVCSQMTEKGVEPNVVTFSSLID------------GQCKAGNIDAAMGLYTEMV 391
              E A+ +   M + G EP+  T+++L+              +     +D    L  E+ 
Sbjct: 1384 LTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELS 1443

Query: 392  IK-----SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             K      +  DV +  A++D   K G+ ++  ++++ M +  +      + S + G++ 
Sbjct: 1444 SKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNV-----VLWSAMLGVYV 1498

Query: 447  NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-NLR 505
              +      F L +    +G    P+ V + +++   C+ G +  A   F  +  D  L 
Sbjct: 1499 FHK-QEEQAFGLWRVMGLEG--VEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLE 1555

Query: 506  PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
            P    ++ ++  L R   + +   L   M+ M   P A     ++  Y+  GD + A R 
Sbjct: 1556 PGVDHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612

Query: 566  SEF 568
            +E 
Sbjct: 1613 AEL 1615



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 5/280 (1%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           ++F  N L+  L    Q   A  L +   +     + VTY++LI G+ + G +  A  + 
Sbjct: 125 EIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELF 184

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M  KG++ +     S++ G C AG    A+  + EM  K+  PD V +  +I+GLSK 
Sbjct: 185 DEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKS 243

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + + +RL +EM++    P+VF+ ++++HG  K  R+ NAL + LE+   T G  C P+
Sbjct: 244 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL-WLLEQM-VTRG--CPPD 299

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I  LC   Q+ +A ++   M     +P+  TY T++ G  R   +   + L+ 
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            M + G  P+A+    ++  +    D++ A +  + + ++
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 8/279 (2%)

Query: 295  FTYNILIKGLCGVGQLEGAEGLLQ-KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T  ++ K L GV   + A G       +EG   +  T N L+    +    + AL V  
Sbjct: 809  LTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQV-- 866

Query: 354  QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
               +    PN+ TF+ LI G C+AG+I  A  L  EM    +  +V++   +I GL    
Sbjct: 867  YRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSAR 926

Query: 414  NMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             +   L L+KEM E+    P VFT S+++  L K+G++ +A     +   K     CSPN
Sbjct: 927  KLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG----CSPN 982

Query: 473  HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
             V Y++++  LC  G++ +A+ L   M      P+  TY T++ G  +  R+ +   LL 
Sbjct: 983  VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042

Query: 533  DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +M+  G  P+ V   V++  + + G  + A    E + E
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 1081


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 289/576 (50%), Gaps = 45/576 (7%)

Query: 49  KFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           +F+PS    S+L+    + G +EEAL + +++    V P I   NAL++ L K   FD  
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA 386

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              ++ M   GL  + VTY +LID  C +G +  AL+   EMID G++P+V  Y  LI+G
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C    +  AES+   M    + P + TY +LM GYC    +N+AL  YHEM    + P+
Sbjct: 447 HCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + TF  L+ GL + G +R A   F  MA++ V PN   YN +I+G+C+ GN+ +A    +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLN 566

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +  I PD ++Y  LI GLC  GQ   A+  +  ++K     N + Y  L+ G+C+EG
Sbjct: 567 EMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+ALSVC  M  +GV+ ++V +  LIDG  K  +    +GL  EM  + L PD V++T
Sbjct: 627 KLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYT 686

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           ++ID  SK G+ KE   ++  M+     P+  T +++I+GL K G ++ A         K
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEIL----CSK 742

Query: 464 TDGGYCSPNHVLYAA-----------------------------------IIQALCYDGQ 488
              G   PN V Y                                     +I+  C  G+
Sbjct: 743 MRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +AS+L + M  D + PD  TYTTM+  L R   +   + L   M + GI PD V    
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 549 MVRGYQENGDLKSAFRC-SEFLKESRIGSSETEGHT 583
           ++ G    G++  A    +E L++    ++ET   T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETT 898



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 181/569 (31%), Positives = 283/569 (49%), Gaps = 37/569 (6%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQ 85
           KP  V  ++F+     ++     S F  LI  +     + + + V++    K+ +LP ++
Sbjct: 136 KPSEVFDALFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVR 193

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
             +ALL+GL+K   F    E +++M+  G+  DV  Y  +I   C   D+ +A  +  +M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
              G +  +V Y +LI GLC + K+ EA  + + +    + P++ TY  L+ G CKV + 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
              LE   EML     P+      L++GL K G++  A N    +A+FGV PNIFVYN L
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ID  CK  N  EA  L   M K  + P+  TY+ILI   C  G+L+ A   L +M   G+
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             +V  YNSLI+G+CK GD+  A S+ ++M  K +EP VVT++SL+ G C  G I+ A+ 
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           LY EM  K +VP +  FT L+ GL + G +++ ++L+ EM E  + P+  T + +I G  
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYC 553

Query: 446 KNGRISNALNFFLEKTDK----------------------------TDG---GYCSPNHV 474
           + G +S A  F  E  +K                             DG   G C  N +
Sbjct: 554 EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  ++   C +G++ +A  +  DM    +  D   Y  ++ G L+ K     + LL +M
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEM 673

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              G+ PD VI   M+    + GD K AF
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 223/479 (46%), Gaps = 60/479 (12%)

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAES------------------MFRSMREC---- 183
           + +G + +   + ILIH L   N    A S                  +F    +C    
Sbjct: 96  LHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSS 155

Query: 184 -------------------------------GVVPNLYTYNALMDGYCKVADVNRALEFY 212
                                           ++P + T +AL+ G  K      A+E +
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M++  ++P+V  +  ++  LC++ +L  A    V M   G   NI  YN LIDG CK 
Sbjct: 216 DDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKK 275

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             ++EA+ +  ++   E+ PDV TY  L+ GLC V + E    ++ +M +     +    
Sbjct: 276 QKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAV 335

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +SL++G  K G +E+AL++  ++ E GV PN+  +++LID  CK  N D A  L+  M  
Sbjct: 336 SSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGK 395

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             L P+ V ++ LID   + G +   L    EM++  + PSV+  +SLI+G  K G IS 
Sbjct: 396 IGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A +   E  +K       P  V Y +++   C  G+I KA +L+ +M    + P   T+T
Sbjct: 456 AESLMAEMINKK----LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           T+L GL RA  + D + L  +M +  + P+ V   VM+ GY E G++  AF   EFL E
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAF---EFLNE 567



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 208/434 (47%), Gaps = 42/434 (9%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K  P+V  +++L+  +   G I +AL +Y ++    ++P+I     LL+GL + G     
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDA 526

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV--------- 154
            + + EM    +  + VTY V+I+  C +G++ KA    +EMI+KGI P           
Sbjct: 527 VKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHG 586

Query: 155 --------------------------VIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
                                     + YT L+HG C E K+ EA S+ + M   GV  +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLD 646

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           L  Y  L+DG  K  D    L    EM    L+P+ V +  ++D   K G+ + A   + 
Sbjct: 647 LVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC-GV 307
            M   G  PN   Y  +I+G CKAG + EA  LCS+M      P+  TY   +  L  GV
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGV 766

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G ++ A  L   + K G+LAN  TYN LI G+C++G ME+A  + ++M   GV P+ +T+
Sbjct: 767 GDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITY 825

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +++I   C+  ++  A+ L+  M  K + PD V +  LI G    G M +   L  EML 
Sbjct: 826 TTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885

Query: 428 AKITPSVFTVSSLI 441
             + P+  T  + I
Sbjct: 886 QGLKPNTETSETTI 899


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 171/503 (33%), Positives = 264/503 (52%), Gaps = 11/503 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +    ALL G  + G+ D     ++EM    LV +V    +LID  C     + AL  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M   GI    VIYT L+ GL  E ++ +A ++   MR+ G  PN+ TYN+L+DG CK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF----- 256
             + +RA E +  M      P++VT+  L+DGL + G+L  A   F  M           
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 257 --PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN+  Y+ LIDG CKA  + +A+ L   M+    SPDV TY IL+ GLC   ++  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L++M   G + N+VTYNSL+ G C+   +  AL++   MT +G  PNVVT+ +LIDG 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +  A  +  +M+ K   PD++++  LI+GL K   + E++ L +  +   I P V
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T SS+I+GL ++ R+  A    L    +     C P+ +LY+ +I  LC  G++ +A  
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRG----CPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+  M  D    D  TY+T++ GL +A R+ +  +LLA M++MG  P  +    +++G  
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 555 ENGDLKSAFRCSEFLKESRIGSS 577
           +   L  A    E ++ S    S
Sbjct: 483 DLNHLDEAIELVEEMERSNCAPS 505



 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 266/487 (54%), Gaps = 13/487 (2%)

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV---------LC 113
           +E    +E     + +E  P++   N LL+GL + GK +     ++EM+          C
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               +V+TY VLID  C    V +A+ L + M  +G  P V+ YTIL+ GLC E+K+  A
Sbjct: 188 S--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R M + G VPNL TYN+L+ G C+   V+ AL    +M      PNVVT+G L+DG
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCKVG ++ A      M   G  P++ +YN LI+G CKA  + E+++L        I PD
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TY+ +I GLC   +L+ A  LL  +   G   +V+ Y++LIDG CK G +++A  +  
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M   G + +VVT+S+LIDG CKAG +D A  L   MV     P  + + +LI GL    
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE-KTDKTDGGYCSPN 472
           ++ E + L +EM  +   PS  T + LIHG+ +  R+ +A+    + K      G  + +
Sbjct: 486 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALD 545

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y+++I  LC  G++ +A   F +M  + + PD+ TY+ +L GL ++K + ++  L+ 
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVL 605

Query: 533 D-MIKMG 538
           D M+++G
Sbjct: 606 DQMVQLG 612



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 161/521 (30%), Positives = 269/521 (51%), Gaps = 19/521 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ L+    +   +++AL +  ++      P +   N+L++GL K  + D   E +E M
Sbjct: 81  IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-------IEPTVVIYTILIHG 163
                   +VTY  L+D     G + +A+ LF EM+D+          P V+ Y++LI G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC  N++ +A  +  SM+  G  P++ TY  L+DG CK + V  A E   EML     PN
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +VT+  L+ GLC+   +  A      M   G  PN+  Y  LIDG CK G + +A ++ +
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M     +PD+  YN+LI GLC   Q++ +  LL++    GI  +VVTY+S+I G C+  
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +++A  +   +  +G  P+V+ +S+LIDG CKAG +D A  LY  M       DVV ++
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYS 440

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDGL K G + E   L   M+     PS  T +SLI GL       N L+  +E  ++
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD----LNHLDEAIELVEE 496

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP-----DNCTYTTMLRGL 518
            +   C+P+ V Y  +I  +C   ++  A  L    ++  +       D   Y++++ GL
Sbjct: 497 MERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +A R+ + +    +MI  G++PD +   +++ G +++ DL
Sbjct: 557 CKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/518 (30%), Positives = 260/518 (50%), Gaps = 16/518 (3%)

Query: 47  IPKFNPSVFS--TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFD 101
           +P   P V++   L+  F   G I++A   +   R   ++P +  C+ L++GL K  +  
Sbjct: 2   LPICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSI 61

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                +  M   G+VAD V Y  L+     +  + +AL +  EM D G EP VV Y  LI
Sbjct: 62  DALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI 121

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML---HH 218
            GLC  N+   A+ +F  M+     P++ TYN L+DG  +   + RA+  + EML    H
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181

Query: 219 NL----QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++     PNV+T+ VL+DGLCK   +  A      M   G  P++  Y  L+DG CK   
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A  +  EM      P++ TYN L+ GLC   ++  A  L++ M   G   NVVTY +
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG CK G ++ A ++ + M +KG  P+++ ++ LI+G CKA  +D ++ L    V   
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PDVV ++++I GL +   + E  RL   +      P V   S+LI GL K G++  A 
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + +    +   G  C  + V Y+ +I  LC  G++ +A  L + M      P   TY ++
Sbjct: 422 DLY----EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 477

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           ++GL     + + + L+ +M +    P AV   +++ G
Sbjct: 478 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 213/426 (50%), Gaps = 11/426 (2%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           +P V  Y  L+ G C   ++ +A+  F  MR   +VPN++  + L+DG CK      AL 
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  M    +  + V +  L+ GL K   L  A      M   G  PN+  YN LIDG C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY-------KE 323
           K      A  L   M+  E SP + TYN L+ GL   G+LE A  L Q+M         +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
               NV+TY+ LIDG CK   + +A+ +   M  +G  P+V+T++ L+DG CK   + AA
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             +  EM+    VP++V + +L+ GL +   + + L L ++M     TP+V T  +LI G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K GR+ +A     +  DK  GG  +P+ ++Y  +I  LC   Q+ ++  L     S  
Sbjct: 306 LCKVGRVKDACAMLADMIDK--GG--TPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++PD  TY++++ GL R+ R+ +   LL  +   G  PD ++   ++ G  + G +  AF
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421

Query: 564 RCSEFL 569
              E +
Sbjct: 422 DLYEVM 427



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%)

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C P+   YAA+++  C  G+I +A + F +MRS NL P+    + ++ GL +AKR +D +
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                M   GIV D VI   ++ G  +   L  A 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQAL 99


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 182/556 (32%), Positives = 274/556 (49%), Gaps = 10/556 (1%)

Query: 33  HVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC 87
           H  +  +  L  ++     P+V  +ST+I  F     ++ A  ++R++     +P +   
Sbjct: 56  HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 115

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N LL+GL + G  D  +E  +EM   GL  D  +Y  L+   C  G +  AL +F++  +
Sbjct: 116 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 175

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
               P VV Y+ LI GLC   ++ EA  +F  MRE    P++ T+ ALMDG CK   +  
Sbjct: 176 GDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +    M   N  PNV+T+  L+DGLCK G++R A   F  M   G+ PN+  YN LI 
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 295

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C    +  A+ L  EM      PD+ TYN LI GLC  G+   A  L   M  +    
Sbjct: 296 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 355

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V+TY+ LI G+CK   ++ A ++   M ++ V P+VVTFS+L++G C AG +D A  L 
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 415

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EMV     PDV  +T+L+DG  K G M E  R+ K M +    P+V T ++LI    + 
Sbjct: 416 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRP 506
           G+ + A     E      G    PN + Y ++I   C  G + +A K+   + R +N + 
Sbjct: 476 GKPTVAYKLLEEMV----GNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKA 531

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D   Y  M+ GL R  RM   + LL  + + G  P   I   ++RG  +  +L  A    
Sbjct: 532 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 591

Query: 567 EFLKESRIGSSETEGH 582
           E +  SR      E +
Sbjct: 592 EEMTLSRKSRPNAEAY 607



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 167/525 (31%), Positives = 270/525 (51%), Gaps = 7/525 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    +   + EA   + K++    +P     N L+NG  K  K    +   
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  +VVTY  +I   C Q  V  A  LF +M++ G  P +V Y  L+ GLC  
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M EA  +   MRE G+ P+ ++Y+ LM G CK   ++ AL+ + +  + +  P+VV +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLCK G L  A   F  M +    P++  +  L+DG CK   L EA  +   ME 
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +P+V TY+ LI GLC  GQ+  A+ + ++M   GI  NVVTYNSLI G+C    ++ 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +  +MT  G  P+++T+++LIDG CK G    A  L+ +M  K   PDV+ ++ LI 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   +     L+ +ML+  + P V T S+L+ G    G + +A    LE+   +D  
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA-ERLLEEMVASD-- 422

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            CSP+   Y +++   C  G++++A ++   M     +P+  TYT ++    RA +    
Sbjct: 423 -CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             LL +M+  G+ P+ +  + ++ G+   GDL+ A +  E L+  
Sbjct: 482 YKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERD 526



 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 171/501 (34%), Positives = 256/501 (51%), Gaps = 9/501 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +++GL K  +      ++ +M   G V +  TY VLI+  C    V +A  L  EM + G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P VV Y+ +IHG C + K+  A  +FR M E G +PNL TYN L+ G C+   ++ A 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   EM    LQP+  ++  LM GLCK G++  A   F   +     P++  Y+ LI G 
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G L EA  L  +M +    PDV T+  L+ GLC   +L+ A+ +L+ M       NV
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TY+SLIDG CK G +  A  V  +M  +G+EPNVVT++SLI G C    +D+A+ L  E
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M     +PD++ +  LIDGL K G   E  RL+ +M      P V T S LI G  K  R
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           I  A   F    D        P+ V ++ +++  C  G +  A +L  +M + +  PD  
Sbjct: 373 IDMARTLF----DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           TYT+++ G  +  RM++   +L  M K G  P+ V    ++  +   G    A++    L
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK----L 484

Query: 570 KESRIGSS-ETEGHTTRSFLG 589
            E  +G+  +    T RS +G
Sbjct: 485 LEEMVGNGVQPNVITYRSLIG 505



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 145/414 (35%), Positives = 232/414 (56%), Gaps = 4/414 (0%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           E  V+ +TI+I GLC  N++ EA + F  M++ G VPN +TYN L++G+CKV  V+RA  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EM    L PNVVT+  ++ G C+  ++  A   F  M + G  PN+  YN L+ G C
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G + EA  L  EM +  + PD F+Y+ L+ GLC  G+++ A  + +         +VV
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y++LI G CK G +++A  +  +M E   EP+VVTF++L+DG CK   +  A  +   M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             ++  P+V+ +++LIDGL K G +++   ++K M+   I P+V T +SLIHG      +
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +AL   +E+   T    C P+ + Y  +I  LC  G+  +A++LF DM++    PD  T
Sbjct: 304 DSAL-LLMEEMTATG---CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           Y+ ++ G  + +R+     L  DM+K  ++PD V    +V GY   G +  A R
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 413



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 227/450 (50%), Gaps = 7/450 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI    + G ++EA  ++ K+      P +    AL++GL K  +     +  E M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +V+TY  LID  C  G V  A  +F  MI +GIEP VV Y  LIHG C  N +
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G +P++ TYN L+DG CK      A   + +M      P+V+T+  L
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK+  +  A   F  M K  V P++  ++ L++G+C AG + +A  L  EM   + 
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV+TY  L+ G C VG++  A  +L++M K G   NVVTY +LID +C+ G    A  
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGL 409
           +  +M   GV+PNV+T+ SLI G C  G+++ A  +   +   ++   D+  +  ++DGL
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G M   L L + + ++   P      +LI GL +   +  A+    E T        
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS--- 600

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            PN   Y A+IQ L  +G+  +A+ L  ++
Sbjct: 601 RPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 149/275 (54%), Gaps = 4/275 (1%)

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            E   +V T+ I+I GLC   +L  A     KM K+G + N  TYN LI+G+CK   + +
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M E G+ PNVVT+S++I G C+   +D A  L+ +MV    +P++V +  L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL ++G M E   L  EM E  + P  F+  +L+ GL K G+I  AL  F + ++    G
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN----G 176

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C P+ V Y+ +I  LC  G++ +A KLF  MR ++  PD  T+T ++ GL +  R+ + 
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +L  M      P+ +    ++ G  + G ++ A
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 271



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/96 (20%), Positives = 47/96 (48%)

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C  N + +  +I  LC   ++ +A+  F+ M+     P+  TY  ++ G  +  ++    
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +LL +M + G+ P+ V    ++ G+     + +A++
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYK 98


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 293/546 (53%), Gaps = 12/546 (2%)

Query: 37  SVFNALNSL-EIPKFNPSV----FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACN 88
           SV +AL S   + + NP      F   + + ++M      +++  +++   V   + + N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L+N L +    D     + +M   G+  DV+T+  LI+  C +G +  A+ L++EM+  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G EP V+ Y  LI+GLCN      A  +F+ M + G  PN+ TYN ++D  CK   VN A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           ++F  EM+   + P+ +T+  ++ GLC +G+L  A   F  M + G  P++  YN +ID 
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
             K   + +A    SEM    I PDV TY  ++ GLC +GQL  A  L +KM ++G   +
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV YN++ID  CK+  +  A+   S+M ++G+ PN VT+S+++ G C  G +D A  L+ 
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EMV ++++P+ + F+ L+DGL ++G + E   +++ M E  + P+++T ++L++G     
Sbjct: 433 EMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRC 492

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           +++ A   F    +   G  C+P+   Y  +I   C   ++ KA  L + M    L P+ 
Sbjct: 493 KMNEARKVF----EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNT 548

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TY T+++GL    R+LD   L   M   G++P  +   +++ G  ++G L  A +  + 
Sbjct: 549 VTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKS 608

Query: 569 LKESRI 574
           +KE ++
Sbjct: 609 MKEKKL 614



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 271/527 (51%), Gaps = 10/527 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI      G I+ A+ +Y ++      P + + N L+NGL   G  +     +++M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +VVTY  +ID  C    V  A++   EM+ +GI P  + Y  ++HGLC   ++
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F+ M + G  P++ TYN ++D   K   VN A +F  EM+   + P+VVT+  +
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC +G+L  A   F  M + G  P++  YN +ID  CK   + +AM   SEM    I
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TY+ ++ G C +GQL+ A  L ++M    ++ N +T++ L+DG C+EG + +A  
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   MTEKGVEPN+ T+++L++G C    ++ A  ++  MV K   PD+  +  LI+G  
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYC 524

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
               M +   L  +M   K+TP+  T ++++ GL   GR+ +A   F     K       
Sbjct: 525 NSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELF----KKMCSSGML 580

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P  + Y+ ++  LC  G + +A KLF  M+   L PD   YT ++ G+    ++     L
Sbjct: 581 PTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGL 640

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA---FRCSEFLKESRI 574
            + +   GI P      VM++G  + G    A   FR  + +K + I
Sbjct: 641 FSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVI 687



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 3/272 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +ST++  F  +G ++EA  +++++    V+P     + L++GL ++G        +
Sbjct: 407 NAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVF 466

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   G+  ++ TY  L++  C +  + +A  +F+ M+ KG  P +  Y ILI+G CN 
Sbjct: 467 ETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNS 526

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M +A+++   M    + PN  TYN +M G C V  +  A E + +M    + P ++T+
Sbjct: 527 RRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTY 586

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++GLCK G L  A   F  M +  + P+I +Y  LI+G    G L  A  L S++  
Sbjct: 587 SILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSA 646

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             I P   TYN++IKGL   G  + A  L +K
Sbjct: 647 DGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 178/550 (32%), Positives = 275/550 (50%), Gaps = 22/550 (4%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           S F  L  L +   +P V  F+TL+        + EAL ++ +I   P +     L+NGL
Sbjct: 137 STFGKLTKLGL---HPDVVTFTTLLHGLCLDHRVSEALDLFHQI-CRPDVLTFTTLMNGL 192

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPT 153
            ++G+        + MV  GL  D +TYG  +D  C  GD + ALNL  +M +   I+P 
Sbjct: 193 CREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VVIY+ +I GLC + +  ++ ++F  M++ G+ PN+ TYN ++ G+C     + A     
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML   + PNVVT+  L++   K G+   A   +  M   G+ PN   YN +IDG CK  
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L  A  +   M     SPDVFT+  LI G CG  +++    LL +M + G++AN VTYN
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM--- 390
           +LI G+C  GD+  AL +  QM   GV P++VT ++L+DG C  G +  A+ ++  M   
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 391 --------VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
                       + PDV+ +  LI GL  +G   E   LY+EM    I P   T SS+I 
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K  R+  A   F+    K+     SPN V +  +I   C  G++    +LF +M   
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKS----FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  D   Y T++ G  +   +   + +  +MI  G+ PD +  + M+ G+    +L+ A
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 563 FRCSEFLKES 572
               E L+ S
Sbjct: 669 VAMLEDLQMS 678



 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 166/538 (30%), Positives = 271/538 (50%), Gaps = 46/538 (8%)

Query: 64  EMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           E+  +E+A+ ++  +     LP++   N L+  +++  + D V   Y++M    +  D+ 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC--------------- 165
           ++ +LI C C    +  AL+ F ++   G+ P VV +T L+HGLC               
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 166 ----------------NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
                            E ++VEA ++   M E G+ P+  TY   +DG CK+ D   AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 210 EFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
               +M    +++PNVV +  ++DGLCK G    + N F+ M   G+FPNI  YNC+I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C +G    A  L  EM + +ISP+V TYN LI      G+   A  L  +M   GI+ N
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            +TYNS+IDG+CK+  ++ A  +   M  KG  P+V TF++LIDG C A  ID  M L  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  + LV + V +  LI G    G++   L L ++M+ + + P + T ++L+ GL  NG
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 449 RISNALNFF---------LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           ++ +AL  F         L+ +   +G    P+ + Y  +I  L  +G+ L+A +L+ +M
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNG--VEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
               + PD  TY++M+ GL +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 246/472 (52%), Gaps = 34/472 (7%)

Query: 14  ARCLIKDVTENLLKSRKPHHVCYSVF-----------NALNSL----EIPKFNPSV--FS 56
           A  L+  + EN L+   P  + Y  F           +ALN L    EI    P+V  +S
Sbjct: 201 AVALLDRMVENGLQ---PDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257

Query: 57  TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            +I    + G   ++  ++ +++   + P I   N ++ G    G++ +     +EM+  
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            +  +VVTY  LI+    +G   +A  L+DEM+ +GI P  + Y  +I G C ++++  A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E MF  M   G  P+++T+  L+DGYC    ++  +E  HEM    L  N VT+  L+ G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE---- 289
            C VG+L AA +    M   GV P+I   N L+DG C  G L +A+ +   M+K +    
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497

Query: 290 -------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
                  + PDV TYNILI GL   G+   AE L ++M   GI+ + +TY+S+IDG CK+
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A  +   M  K   PNVVTF++LI+G CKAG +D  + L+ EM  + +V D +++
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             LI G  K GN+   L +++EM+ + + P   T+ +++ G +    +  A+
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 221/438 (50%), Gaps = 9/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+V+ +  L+  +    +     S+++ M    +  ++Y++  L+ 
Sbjct: 65  AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A + F  + +    P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----P 180

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  +  L++G C+ G + EA++L   M +  + PD  TY   + G+C +G    A  LL
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I  NVV Y+++IDG CK+G    + ++  +M +KG+ PN+VT++ +I G C 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G   AA  L  EM+ + + P+VV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S+I G  K  R+  A + F     K     CSP+   +  +I   C   +I    +L 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKG----CSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +  TY T++ G      +   + L   MI  G+ PD V    ++ G  +N
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 477 GKLKDALEMFKAMQKSKM 494



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 207/404 (51%), Gaps = 9/404 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  M     +P++  +N LM    ++   +  +  Y +M    ++ ++ +F +L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C   +L  A + F  + K G+ P++  +  L+ G C    + EA+ L  ++ +    
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---- 179

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV T+  L+ GLC  G++  A  LL +M + G+  + +TY + +DG CK GD   AL++
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 352 CSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             +M E   ++PNVV +S++IDG CK G    +  L+ EM  K + P++V +  +I G  
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G      RL +EMLE KI+P+V T ++LI+   K G+   A   + E   +       
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG----II 355

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y ++I   C   ++  A  +F  M +    PD  T+TT++ G   AKR+ D M L
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           L +M + G+V + V    ++ G+   GDL +A   S+ +  S +
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 169/334 (50%), Gaps = 9/334 (2%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G  ++  L  A + F  M +    P++  +N L+    +       +SL  +ME+ +
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I  D++++ ILIK  C   +L  A     K+ K G+  +VVT+ +L+ G C +  + +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  Q+      P+V+TF++L++G C+ G +  A+ L   MV   L PD + +   +DG+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 410 SKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            K G+    L L ++M E + I P+V   S++I GL K+GR S++ N F+E  DK     
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG---- 283

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN V Y  +I   C  G+   A +L  +M    + P+  TY  ++   ++  +  +  
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L  +M+  GI+P+ +    M+ G+ +   L +A
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 177/552 (32%), Positives = 276/552 (50%), Gaps = 22/552 (3%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           S F  L  L +   +P V  F+TL+        + EAL ++ +I   P +     L+NGL
Sbjct: 137 STFGKLTKLGL---HPDVVTFTTLLHGLCLDHRVSEALDLFHQI-CRPDVLTFTTLMNGL 192

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPT 153
            ++G+        + MV  GL  D +TYG  +D  C  GD + ALNL  +M +   I+P 
Sbjct: 193 CREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VVIY+ +I GLC + +  ++ ++F  M++ G+ PN+ TYN ++ G+C     + A     
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML   + PNVVT+  L++   K G+   A   +  M   G+ PN   YN +IDG CK  
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L  A  +   M     SPDVFT+  LI G CG  +++    LL +M + G++AN VTYN
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM--- 390
           +LI G+C  GD+  AL +  QM   GV P++VT ++L+DG C  G +  A+ ++  M   
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 391 --------VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
                       + PDV+ +  LI GL  +G   E   LY+EM    I P   T SS+I 
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K  R+  A   F+    K+     SPN V +  +I   C  G++    +LF +M   
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKS----FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  D   Y T++ G  +   +   + +  +MI  G+ PD +  + M+ G+    +L+ A
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 563 FRCSEFLKESRI 574
               E L+  ++
Sbjct: 669 VAMLEDLQRYQL 680



 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 166/538 (30%), Positives = 271/538 (50%), Gaps = 46/538 (8%)

Query: 64  EMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           E+  +E+A+ ++  +     LP++   N L+  +++  + D V   Y++M    +  D+ 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC--------------- 165
           ++ +LI C C    +  AL+ F ++   G+ P VV +T L+HGLC               
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 166 ----------------NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
                            E ++VEA ++   M E G+ P+  TY   +DG CK+ D   AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 210 EFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
               +M    +++PNVV +  ++DGLCK G    + N F+ M   G+FPNI  YNC+I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C +G    A  L  EM + +ISP+V TYN LI      G+   A  L  +M   GI+ N
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            +TYNS+IDG+CK+  ++ A  +   M  KG  P+V TF++LIDG C A  ID  M L  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  + LV + V +  LI G    G++   L L ++M+ + + P + T ++L+ GL  NG
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 449 RISNALNFF---------LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           ++ +AL  F         L+ +   +G    P+ + Y  +I  L  +G+ L+A +L+ +M
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNG--VEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
               + PD  TY++M+ GL +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 246/472 (52%), Gaps = 34/472 (7%)

Query: 14  ARCLIKDVTENLLKSRKPHHVCYSVF-----------NALNSL----EIPKFNPSV--FS 56
           A  L+  + EN L+   P  + Y  F           +ALN L    EI    P+V  +S
Sbjct: 201 AVALLDRMVENGLQ---PDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257

Query: 57  TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            +I    + G   ++  ++ +++   + P I   N ++ G    G++ +     +EM+  
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            +  +VVTY  LI+    +G   +A  L+DEM+ +GI P  + Y  +I G C ++++  A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E MF  M   G  P+++T+  L+DGYC    ++  +E  HEM    L  N VT+  L+ G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE---- 289
            C VG+L AA +    M   GV P+I   N L+DG C  G L +A+ +   M+K +    
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497

Query: 290 -------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
                  + PDV TYNILI GL   G+   AE L ++M   GI+ + +TY+S+IDG CK+
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A  +   M  K   PNVVTF++LI+G CKAG +D  + L+ EM  + +V D +++
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             LI G  K GN+   L +++EM+ + + P   T+ +++ G +    +  A+
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 221/438 (50%), Gaps = 9/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+V+ +  L+  +    +     S+++ M    +  ++Y++  L+ 
Sbjct: 65  AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A + F  + +    P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----P 180

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  +  L++G C+ G + EA++L   M +  + PD  TY   + G+C +G    A  LL
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I  NVV Y+++IDG CK+G    + ++  +M +KG+ PN+VT++ +I G C 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G   AA  L  EM+ + + P+VV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S+I G  K  R+  A + F     K     CSP+   +  +I   C   +I    +L 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKG----CSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +  TY T++ G      +   + L   MI  G+ PD V    ++ G  +N
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 477 GKLKDALEMFKAMQKSKM 494



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 204/397 (51%), Gaps = 9/397 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  M     +P++  +N LM    ++   +  +  Y +M    ++ ++ +F +L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C   +L  A + F  + K G+ P++  +  L+ G C    + EA+ L  ++ +    
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---- 179

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV T+  L+ GLC  G++  A  LL +M + G+  + +TY + +DG CK GD   AL++
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 352 CSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             +M E   ++PNVV +S++IDG CK G    +  L+ EM  K + P++V +  +I G  
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G      RL +EMLE KI+P+V T ++LI+   K G+   A   + E   +       
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG----II 355

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y ++I   C   ++  A  +F  M +    PD  T+TT++ G   AKR+ D M L
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           L +M + G+V + V    ++ G+   GDL +A   S+
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 160/325 (49%), Gaps = 14/325 (4%)

Query: 51  NPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++++I  F +   +   E+  ++       P +     L++G     + D   E  
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GLVA+ VTY  LI   C  GD+  AL+L  +MI  G+ P +V    L+ GLC+ 
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 168 NKMVEAESMFRSMREC-----------GVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
            K+ +A  MF++M++            GV P++ TYN L+ G         A E Y EM 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           H  + P+ +T+  ++DGLCK   L  A   FV M      PN+  +N LI+G+CKAG + 
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           + + L  EM +  I  D   Y  LI G   VG + GA  + Q+M   G+  + +T  +++
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVE 361
            G+  + ++E+A+++   +    +E
Sbjct: 657 TGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 169/334 (50%), Gaps = 9/334 (2%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G  ++  L  A + F  M +    P++  +N L+    +       +SL  +ME+ +
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I  D++++ ILIK  C   +L  A     K+ K G+  +VVT+ +L+ G C +  + +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  Q+      P+V+TF++L++G C+ G +  A+ L   MV   L PD + +   +DG+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 410 SKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            K G+    L L ++M E + I P+V   S++I GL K+GR S++ N F+E  DK     
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG---- 283

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN V Y  +I   C  G+   A +L  +M    + P+  TY  ++   ++  +  +  
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L  +M+  GI+P+ +    M+ G+ +   L +A
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 171/530 (32%), Positives = 271/530 (51%), Gaps = 19/530 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           F+PS+  FSTL+        + EAL  + +I   P + A   L+NGL ++G+        
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQI-CKPNVIAFTTLMNGLCREGRVVEAVALL 200

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCN 166
           + MV  GL  + +TYG ++D  C  GD + ALNL  +M +   I+P VVIY+ +I GL  
Sbjct: 201 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWK 260

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + +  +A+++F  M+E G+ PNL+TYN +++G+C     + A     EM    + P+VVT
Sbjct: 261 DGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT 320

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F VL++ L K G+   A   +  M   G+ PN   YN +IDG  K   L  A  +   M 
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               SPDV T++ILI G CG  +++    LL +M + G++AN +TY +LI G+C+ G++ 
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-----------VIKSL 395
            AL +  +M   GV PNVVT ++L+DG C  G +  A+ ++  M               +
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDV  +  LI GL  +G   E   LY+EM    + P   T +S+I GL K  R+  A  
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    D       SP+ V +  +I   C  G++    ++F +M    +  +  TY T++
Sbjct: 561 MF----DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
            G  +   +   + +  +MI  G+ PD +  + M+ G     +LK A +C
Sbjct: 617 HGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQC 666



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/514 (32%), Positives = 271/514 (52%), Gaps = 15/514 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV--LPA-IQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F  L+     M   +  + ++RK+E+  +P  I +   L+       K       + ++ 
Sbjct: 79  FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G    +VT+  L+   C +  V +AL+ F ++     +P V+ +T L++GLC E ++V
Sbjct: 139 KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC----KPNVIAFTTLMNGLCREGRVV 194

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVL 230
           EA ++   M E G+ PN  TY  ++DG CK+ D   AL    +M     ++PNVV +  +
Sbjct: 195 EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAI 254

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G    A N F  M + G+ PN+F YNC+I+G C +G   EA  L  EM + ++
Sbjct: 255 IDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKM 314

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV T+++LI  L   G+   AE L  +M   GI+ N +TYNS+IDG+ K+  ++ A  
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAER 374

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M  KG  P+V+TFS LIDG C A  +D  M L  EM  + LV + + +T LI G  
Sbjct: 375 MFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFC 434

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTD-KTDGG 467
           + GN+   L L +EM+ + + P+V T ++L+ GL  NG++ +AL  F  ++K+    D  
Sbjct: 435 QLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494

Query: 468 Y----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           +      P+   Y  +I  L  +G+  +A +L+ +M    L PD  TY +++ GL +  R
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + +   +   M   G  PD V    ++ GY + G
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 231/436 (52%), Gaps = 17/436 (3%)

Query: 37  SVFNALNSLE-IPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNAL 90
           S  N L  +E + +  P+V  +S +I    + G   +A  ++ +++   + P +   N +
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           +NG    G++        EM    +  DVVT+ VLI+    +G   +A  L++EM+ +GI
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P  + Y  +I G   +N++  AE MF  M   G  P++ T++ L+DGYC    V+  ++
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
             HEM    L  N +T+  L+ G C++G L AA +    M   GV PN+   N L+DG C
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469

Query: 271 KAGNLFEAMSLCSEMEKF-----------EISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             G L +A+ +   M+K            ++ PDV TYNILI GL   G+   AE L ++
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEE 529

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G++ + +TYNS+IDG CK+  +++A  +   M  KG  P+VVTF++LI+G CK G 
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +   + ++ EM  + +V + + +  LI G  + GN+   L +++EM+ + + P   T+ +
Sbjct: 590 VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRN 649

Query: 440 LIHGLFKNGRISNALN 455
           ++ GL+    +  A+ 
Sbjct: 650 MLTGLWSKEELKRAVQ 665



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 222/438 (50%), Gaps = 9/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF  M+     P V+ +  L+  +    +     S+ R M    +  N+Y++  L+ 
Sbjct: 60  AIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIK 119

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++      P++VTF  L+ GLC    +  A +FF  + K    P
Sbjct: 120 CFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----P 175

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P+  TY  ++ G+C +G    A  LL
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I  NVV Y+++IDG  K+G    A ++ S+M EKG+ PN+ T++ +I+G C 
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM  + + PDVV F+ LI+ L K+G   E   LY EML   I P+  T
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S+I G  K  R+  A   F     K     CSP+ + ++ +I   C   ++    KL 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKG----CSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +  TYTT++ G  +   +   + LL +MI  G+ P+ V    ++ G   N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 472 GKLKDALEMFKVMQKSKM 489



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L  G+ +   ++ A+ +   M      P V+ F  L+    +    D  + L+ +M ++ 
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  ++  FT LI        +   L  + ++ +    PS+ T S+L+HGL    R+S AL
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +FF +         C PN + +  ++  LC +G++++A  L   M  D L+P+  TY T+
Sbjct: 167 HFFHQ--------ICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218

Query: 515 LRGLLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQENGDLKSA 562
           + G+ +    +  + LL  M ++  I P+ VI   ++ G  ++G    A
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 283/549 (51%), Gaps = 42/549 (7%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI ++ +   + E      + R+   L +I ACN+LL GL+K G  D  WE Y E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 111 V-----------------LC------------------GLVADVVTYGVLIDCCCGQGDV 135
                             LC                  G+ AD+VTY  LI+  C +G +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A  + + M  KG++PT+  Y  +I+GLC + + V A+ +F  M   G+ P+  TYN L
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C+  +   A + + +MLH  + P++++F  L+    + G L  A  +F  M   G+
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+  +Y  LI+G+C+ G + EA+ +  +M +   + DV  YN ++ GLC    L  A  
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M + G++ +  T+ +LI G+CKEG+M KALS+   MT+K ++P++VT++ LIDG C
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++ A  L+ EM+ + + P+ + +  L++G    G + E  RL+ EM+   I P++ 
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +++I G  ++G +S A  F  +   +  G    P+ + Y  +I        + KA  L
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVG----PDSITYNTLINGFVKGEYMDKAFFL 592

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            + M +  L+PD  TY  +L G  R  RM +  ++L  MI+ GI PD      ++ GY  
Sbjct: 593 INKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVS 652

Query: 556 NGDLKSAFR 564
             +LK AFR
Sbjct: 653 QDNLKEAFR 661



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 223/398 (56%), Gaps = 4/398 (1%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           VFN + S+ +   + + ++TL++      +  EA  ++  +    V P + + ++L+   
Sbjct: 277 VFNEMLSIGLSP-DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVS 335

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            + G  D    ++ +M   GLV D V Y +LI+  C  G + +AL + D+M+++G    V
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V Y  +++GLC +  + +A ++F  M E GVVP+  T+  L+ G+CK  ++ +AL  +  
Sbjct: 396 VAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGI 455

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M   N++P++VT+ +L+DG CK  E+  A   +  M    +FPN   Y  L++G+C  G 
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L  EM +  I P + T N +IKG C  G L  A+  L KM  EG+  + +TYN+
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+G+ K   M+KA  + ++M  KG++P+VVT++ +++G C+ G +  A  +  +M+ + 
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           + PD   +T LI+G     N+KE  R + EML+    P
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 199/347 (57%), Gaps = 3/347 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+LI   S  GH+++AL  +R ++   ++P       L+NG  + G      E  ++M+
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DVV Y  +++  C +  +  A  LFDEM+++G+ P    +T LIHG C E  M 
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S+F  M +  + P++ TYN L+DG+CK  ++ +A E ++EM+   + PN +++ +L+
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G C +G +  A   +  M + G+ P +   N +I G+C++G+L +A     +M    + 
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TYN LI G      ++ A  L+ KM  +G+  +VVTYN +++G+C++G M++A  +
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             +M E+G++P+  T+++LI+G     N+  A   + EM+ +  VPD
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 214/410 (52%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +LI       K+ E    F+ +R  G + ++   N+L+ G  K+  V+ A E Y+E
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +    ++ NV T  ++++ LCK  ++     F + M + G+F +I  YN LI+ +C+ G 
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA  + + M    + P +FTYN +I GLC  G+   A+G+  +M   G+  +  TYN+
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  +  +A  + S M  +GV P++++FSSLI    + G++D A+  + +M    
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           LVPD V++T LI+G  ++G M E L +  +MLE      V   +++++GL K   +++A 
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E  ++       P+   +  +I   C +G + KA  LF  M   N++PD  TY  +
Sbjct: 416 ALFDEMVERG----VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M     L  +MI   I P+ +   ++V GY   G +  AFR
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 222/486 (45%), Gaps = 41/486 (8%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           CG+  D + + +LI        + +  + F  +  KG   ++     L+ GL     +  
Sbjct: 111 CGV--DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDL 168

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  ++  +   G+  N+YT N +++  CK   ++    F  +M    +  ++VT+  L++
Sbjct: 169 AWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLIN 228

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
             C+ G L  A      M+  G+ P +F YN +I+G CK G    A  + +EM    +SP
Sbjct: 229 AYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSP 288

Query: 293 DVFTYNILI-------------------------------KGLCGV----GQLEGAEGLL 317
           D  TYN L+                                 L GV    G L+ A    
Sbjct: 289 DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYF 348

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M   G++ + V Y  LI+GYC+ G M +AL +  +M E+G   +VV ++++++G CK 
Sbjct: 349 RDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKK 408

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +  A  L+ EMV + +VPD   FT LI G  K+GNM + L L+  M +  I P + T 
Sbjct: 409 KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTY 468

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G  K   +  A   + E   +       PNH+ YA ++   C  G + +A +L+ 
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRK----IFPNHISYAILVNGYCNLGFVSEAFRLWD 524

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    ++P   T  T+++G  R+  +      L  MI  G+ PD++    ++ G+ +  
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584

Query: 558 DLKSAF 563
            +  AF
Sbjct: 585 YMDKAF 590



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 132/280 (47%), Gaps = 4/280 (1%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D   +++LI+      +L       + + ++G L ++   NSL+ G  K G ++ A  V 
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           +++   G+E NV T + +++  CK   ID       +M  K +  D+V +  LI+   ++
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E   +   M    + P++FT +++I+GL K GR   A   F E          SP+
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG----LSPD 289

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  ++   C +   L+A  +FSDM    + PD  ++++++    R   +   +M   
Sbjct: 290 TTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFR 349

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           DM   G+VPD VI  +++ GY  NG +  A    + + E 
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQ 389


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 191/611 (31%), Positives = 301/611 (49%), Gaps = 63/611 (10%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALN-SLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L +DV    L           VF +L  + ++     SVF  ++ 
Sbjct: 87  LHILTKFKLYKTAQILAEDVAAKTLDDE----YASLVFKSLQETYDLCYSTSSVFDLVVK 142

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWE-FYEEMVLCGLV 116
           ++S +  I++AL +    +    +P + + NA+L+  I+  +  S  E  ++EM+   + 
Sbjct: 143 SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS 202

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY +LI   C  G++  AL LFD+M  KG  P VV Y  LI G C   K+ +   +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262

Query: 177 FRSMRECGVVPNL-----------------------------------YTYNALMDGYCK 201
            RSM   G+ PNL                                    TYN L+ GYCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             + ++AL  + EML H L P+V+T+  L+  +CK G +  A  F   M   G+ PN   
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+DG  + G + EA  +  EM     SP V TYN LI G C  G++E A  +L+ M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++G+  +VV+Y++++ G+C+  D+++AL V  +M EKG++P+ +T+SSLI G C+     
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  LY EM+   L PD   +TALI+    +G++++ L+L+ EM+E  + P V T S LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 442 HGLFKNGRISNA----LNFFLEKTDKTDGGYCSPNHVL-----------YAAIIQALCYD 486
           +GL K  R   A    L  F E++  +D  Y    H L             ++I+  C  
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTY----HTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A ++F  M   N +PD   Y  M+ G  RA  +     L  +M+K G +   V  
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678

Query: 547 QVMVRGYQENG 557
             +V+   + G
Sbjct: 679 IALVKALHKEG 689



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 213/382 (55%), Gaps = 5/382 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVA-DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
           G +P + +YNA++D   +   +++ A   + EML   + PNV T+ +L+ G C  G +  
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M   G  PN+  YN LIDG+CK   + +   L   M    + P++ +YN++I 
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC  G+++    +L +M + G   + VTYN+LI GYCKEG+  +AL + ++M   G+ P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V+T++SLI   CKAGN++ AM    +M ++ L P+   +T L+DG S+ G M E  R+ 
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM +   +PSV T ++LI+G    G++ +A+    +  +K      SP+ V Y+ ++  
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG----LSPDVVSYSTVLSG 459

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C    + +A ++  +M    ++PD  TY+++++G    +R  +   L  +M+++G+ PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
                 ++  Y   GDL+ A +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQ 541



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 224/458 (48%), Gaps = 54/458 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + ++  I++   + R + +    P + + N ++NGL ++G+   V    
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   D VTY  LI   C +G+  +AL +  EM+  G+ P+V+ YT LIH +C  
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A      MR  G+ PN  TY  L+DG+ +   +N A     EM  +   P+VVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C  G++  A      M + G+ P++  Y+ ++ G C++ ++ EA+ +  EM +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PD  TY+ LI+G C   + + A  L ++M + G+  +  TY +LI+ YC EGD+EK
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 348 ALSVCSQMTEKGVEPNVVTFS--------------------------------------- 368
           AL + ++M EKGV P+VVT+S                                       
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 369 -----------SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
                      SLI G C  G +  A  ++  M+ K+  PD   +  +I G  + G++++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
              LYKEM+++       TV +L+  L K G++ N LN
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV-NELN 695



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 207/385 (53%), Gaps = 7/385 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE-LRAAGNFFVHM 250
           ++ ++  Y +++ +++AL   H    H   P V+++  ++D   +    +  A N F  M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            +  V PN+F YN LI G C AGN+  A++L  +ME     P+V TYN LI G C + ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           +    LL+ M  +G+  N+++YN +I+G C+EG M++   V ++M  +G   + VT+++L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G CK GN   A+ ++ EM+   L P V+ +T+LI  + K GNM   +    +M    +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+  T ++L+ G  + G ++ A     E  D    G+ SP+ V Y A+I   C  G++ 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMND---NGF-SPSVVTYNALINGHCVTGKME 432

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A  +  DM+   L PD  +Y+T+L G  R+  + + + +  +M++ GI PD +    ++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 551 RGYQENGDLKSAFRCSEFLKESRIG 575
           +G+ E    K A  C  + +  R+G
Sbjct: 493 QGFCEQRRTKEA--CDLYEEMLRVG 515



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 53/369 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+  FS+ G++ EA  V R++      P++   NAL+NG    GK +      
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M   GL  DVV+Y  ++   C   DV +AL +  EM++KGI+P  + Y+ LI G C +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA  ++  M   G+ P+ +TY AL++ YC   D+ +AL+ ++EM+   + P+VVT+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558

Query: 228 GVLMDGL--------------------------------------------------CKV 237
            VL++GL                                                  C  
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M      P+   YN +I GHC+AG++ +A +L  EM K        T 
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+K L   G++     ++  + +   L+       L++   +EG+M+  L V ++M +
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738

Query: 358 KGVEPNVVT 366
            G  PN ++
Sbjct: 739 DGFLPNGIS 747


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 168/500 (33%), Positives = 269/500 (53%), Gaps = 7/500 (1%)

Query: 68  IEEALW-VYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I++AL   YR + +   P++      L    KK ++ +V     +M L G+  +V +  V
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+C C    V  A+++  +M   GI PT   +  LI+GLCNE K+ EA  +F  M   G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             PN+ +YN +++G CK  + + A++ + +M  +  +P+VVT+  ++D LCK   +  A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
            F   M   G+ PN+F YNC++ G C  G L EA  L  EM   ++ PD  T  IL+ GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A  + + M ++G+  N+ TYN+L+DGYC +  M +A  V   M  +G  P V
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            +++ LI+G CK+  +D A  L  EM  K+L PD V ++ L+ GL + G  KE L ++KE
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    + P++ T S L+ G  K+G +  AL       +K       PN V +  +I+ + 
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK----LEPNIVHHTILIEGMF 484

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A +LFS + +D +RP   TYT M++GLL+     +   L   M   G +P++ 
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 545 INQVMVRGYQENGDLKSAFR 564
              VM++G+ +N D  +A R
Sbjct: 545 SYNVMIQGFLQNQDSSTAIR 564



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 256/484 (52%), Gaps = 9/484 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +V +  N +++     +V+S   LI     + H++ A+ +  K+  L   P     NAL+
Sbjct: 106 TVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALI 165

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL  +GK     E + EMV  G   +V++Y  +I+  C  G+   A+++F +M   G +
Sbjct: 166 NGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCK 225

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  +I  LC +  + +A      M + G+ PN++TYN ++ G+C +  +N A   
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+  ++ P+ VT  +L+DGLCK G +  A   F  M + GV PNI  YN L+DG+C 
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  +   M +   +P V +YNILI G C   +++ A+ LL +MY + +  + VT
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++L+ G C+ G  ++AL++  +M   G+ PN+VT+S L+DG CK G++D A+ L   M 
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K L P++V  T LI+G+   G ++    L+ ++    I P++ T + +I GL K G   
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F +  D  DG    PN   Y  +IQ    +     A +L  +M       +  T+
Sbjct: 526 EAYDLFRKMED--DGFL--PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTF 581

Query: 512 TTML 515
             +L
Sbjct: 582 QMLL 585



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 189/341 (55%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   N +++G    G+ +     ++EMV   ++ D VT  +L+D  C +G V +A 
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR 318

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +F+ M +KG+EP +  Y  L+ G C +  M EA+ +F  M   G  P +++YN L++G+
Sbjct: 319 LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   ++ A     EM H  L P+ VT+  LM GLC+ G  + A N F  M  +G+ PN+
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y+ L+DG CK G+L EA+ L   M++ ++ P++  + ILI+G+   G+LE A+ L  K
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           ++ +GI   + TY  +I G  KEG  ++A  +  +M + G  PN  +++ +I G  +  +
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
              A+ L  EMV K    ++  F  L+D  S+D  + + +R
Sbjct: 559 SSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQFMR 599



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 201/401 (50%), Gaps = 31/401 (7%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++ AL  ++ M+  N +P+V  FG  +    K  +     +    M  FGV  N++  N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+  C+  ++  A+S+  +M K  I P   T+N LI GLC  G+++ A  L  +M + G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NV++YN++I+G CK G+   A+ V  +M + G +P+VVT++++ID  CK   ++ AM
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
              +EM+ + + P+V  +  ++ G    G + E  RL+KEM+   + P   T++ L+ GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 445 FKNGRISNALNFFLEKTDK-----------TDGGY--------------------CSPNH 473
            K G +S A   F   T+K              GY                    C+P  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I   C   ++ +A  L ++M    L PD  TY+T+++GL +  R  + + +  +
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           M   G++P+ V   +++ G+ ++G L  A +  + ++E ++
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 168/326 (51%), Gaps = 5/326 (1%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+VF+   ++  F  +G + EA  +++++   +V+P       L++GL K+G        
Sbjct: 261 PNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLV 320

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E M   G+  ++ TY  L+D  C Q  + +A  +F+ MI +G  P V  Y ILI+G C 
Sbjct: 321 FETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCK 380

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +M EA+S+   M    + P+  TY+ LM G C+      AL  + EM  + L PN+VT
Sbjct: 381 SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVT 440

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+DG CK G L  A      M +  + PNI  +  LI+G   AG L  A  L S++ 
Sbjct: 441 YSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLF 500

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I P + TY ++IKGL   G  + A  L +KM  +G L N  +YN +I G+ +  D  
Sbjct: 501 ADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 560

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLID 372
            A+ +  +M  K    N+ TF  L+D
Sbjct: 561 TAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 39/221 (17%)

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV- 437
           +ID A+  +  MV  +  P V  F   +   +K       + L  +M    +T +V+++ 
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 438 ----------------------------------SSLIHGLFKNGRISNALNFFLEKTDK 463
                                             ++LI+GL   G+I  A+  F E   +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN + Y  II  LC  G    A  +F  M  +  +PD  TY T++  L + + 
Sbjct: 188 GH----EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + D M  L++M+  GI P+      MV G+   G L  A R
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATR 284


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 178/549 (32%), Positives = 275/549 (50%), Gaps = 44/549 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ ++ +    G    AL ++R    +  V P I   N ++NGL K  +  +  E +EE+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVVTY  LID  C  GD+ +A  L  +M  +   P VV Y++LI+GLC   ++
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 171 VEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ--PNVVT 226
            EA  + + M  + C V+PN+ TYN+ +DG CK +    A E    +   +L+  P+ VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DGLCK G++  A + F  M   G  PN+  YN L++G CKA  +  A ++   M 
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++PDV TY++L+   C   +++ A  LL  M   G   NVVT+NS+IDG CK     
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 347 KALSVCSQMTEK-GVEPNVVTFSSLIDG-------------------------QC----- 375
           +A  +   M  K G+ P+ +T+ +LIDG                          C     
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 376 -KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K G++  A+ +Y  M+   LVPD V F  LI G  K GN ++   L++EM+   + P V
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T  +LI GL K G++  A +      D        PN V Y A++  LC  G+I +A +
Sbjct: 603 MTFGALIDGLCKAGQVEAARDIL----DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
              +M S    PD+ TY +++  L RA R  D + L++++   G  PD V   ++V G  
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 555 ENGDLKSAF 563
           ++G  + A 
Sbjct: 719 KSGQTEQAI 727



 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 183/552 (33%), Positives = 277/552 (50%), Gaps = 48/552 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            FSTLI    + G I+EA  V+  +     +P +   NAL+NGL K  K +      E M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+  DV+TY VL+D  C    V +AL L   M  +G  P VV +  +I GLC  ++ 
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 171 VEAESMFRSMR-ECGVVPNLYTYNALMDGY------------------------------ 199
            EA  MF  M  + G+VP+  TY  L+DG                               
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCING 541

Query: 200 -CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             K+ DV+RAL+ Y+ ML   L P+ VTF +L+ G CK G    A   F  M    + P+
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +  LIDG CKAG +  A  +   M    + P+V TYN L+ GLC  G++E A   L+
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   G + + +TY SL+   C+    + AL + S++   G +P+ VT++ L+DG  K+G
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 721

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT----PSV 434
             + A+ +  EMV K   PDVV +  LID L K G+++E  RL+ +M  ++++    P+V
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM-SSRVSRCCVPNV 780

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKA 492
            T S LI+GL K GRI  A     E   K+    C   PN + Y + +  LC    + +A
Sbjct: 781 VTYSVLINGLCKVGRIDEARELIQEMMRKS----CDVLPNIITYNSFLDGLCKQSMMAEA 836

Query: 493 SKLFSDMRSDNLR--PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +L   +R  +LR  PD  T++T++ GL +  +  +   +  DMI  G VP+ V   V++
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896

Query: 551 RGYQENGDLKSA 562
            G  +   ++ A
Sbjct: 897 NGLCKTDKMERA 908



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/509 (32%), Positives = 265/509 (52%), Gaps = 15/509 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+ AF +   ++EAL +   +      P +   N++++GL K  +    ++ +++M
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491

Query: 111 VL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            L  GLV D +TY  LID     G   +A  L D M D    P    +   I+GL     
Sbjct: 492 ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGD 547

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  ++  M E  +VP+  T+N L+ G CK  +  +A   + EM+  NLQP+V+TFG 
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DGLCK G++ AA +    M   GV PN+  YN L+ G CK+G + EA     EM    
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD  TY  L+  LC   + + A  L+ ++   G   + VTYN L+DG  K G  E+A+
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM---VIKSLVPDVVVFTALI 406
           +V  +M  KG  P+VVT+++LID  CKAG+++ A  L+ +M   V +  VP+VV ++ LI
Sbjct: 728 TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 407 DGLSKDGNMKETLRLYKEMLEAK--ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +GL K G + E   L +EM+     + P++ T +S + GL K   ++ A        D +
Sbjct: 788 NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SP+ V ++ +I  LC  GQ  +A  +F DM +    P+  TY  ++ GL +  +M
Sbjct: 848 --LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGY 553
                ++  M+  G+ PD +   V+V  +
Sbjct: 906 ERAHAMIESMVDKGVTPDVITYSVLVDAF 934



 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 178/570 (31%), Positives = 282/570 (49%), Gaps = 51/570 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   +S LI    ++G I+EA  + +++     +VLP I   N+ L+GL K+       E
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 106 FYEEMVLCGL--VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               +    L    D VT+  LID  C  G + +A ++FD+MI  G  P V+ Y  L++G
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC  +KM  A +M  SM + GV P++ TY+ L+D +CK + V+ ALE  H M      PN
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 464

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVF-------------------------- 256
           VVTF  ++DGLCK      A   F  MA K G+                           
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524

Query: 257 -----PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                P+ + +NC I+G  K G++  A+ + + M + E+ PD  T+NILI G C  G  E
Sbjct: 525 DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L ++M  + +  +V+T+ +LIDG CK G +E A  +   M   GV PNVVT+++L+
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK+G I+ A     EMV    VPD + + +L+  L +     + L+L  E+      
Sbjct: 645 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P   T + L+ GL+K+G+   A+    E   K   G+  P+ V Y  +I +LC  G + +
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGK---GH-HPDVVTYNTLIDSLCKAGDLEE 760

Query: 492 ASKLFSDMRSDNLR---PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG--IVPDAVIN 546
           A +L  DM S   R   P+  TY+ ++ GL +  R+ +   L+ +M++    ++P+ +  
Sbjct: 761 ARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITY 820

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
              + G  +   +  A    E ++  R GS
Sbjct: 821 NSFLDGLCKQSMMAEA---CELMRSLRDGS 847



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 249/507 (49%), Gaps = 37/507 (7%)

Query: 54   VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             F  LI    + G +E A   L +   + V P +   NAL++GL K G+ +   +F EEM
Sbjct: 604  TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            V  G V D +TYG L+   C       AL L  E+   G +P  V Y IL+ GL    + 
Sbjct: 664  VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQT 723

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM---LHHNLQPNVVTF 227
             +A ++   M   G  P++ TYN L+D  CK  D+  A   + +M   +     PNVVT+
Sbjct: 724  EQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTY 783

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             VL++GLCKVG +  A      M +    V PNI  YN  +DG CK   + EA  L   +
Sbjct: 784  SVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843

Query: 286  E--KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
                  +SPD  T++ LI GLC  GQ + A  +   M   G + NVVTYN L++G CK  
Sbjct: 844  RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903

Query: 344  DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
             ME+A ++   M +KGV P+V+T+S L+D  CKA ++D A+ L   M  +   P+VV F 
Sbjct: 904  KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFN 963

Query: 404  ALIDGLSKDGNMKETLRLYKEM-LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            ++IDGL K     E  +++ +M L+  + P   T  +LI GLF+ G    A    L+   
Sbjct: 964  SIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA-EVLLDAMP 1022

Query: 463  KTDG-------------GYCS------------PNHVLYAAIIQALCYDGQILKASKLFS 497
              D              G  S            P+ V +  +I   C  G   +AS LF 
Sbjct: 1023 DPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 1082

Query: 498  DMRSDNLRPDNCTYTTMLRGLLRAKRM 524
            +M + NL+PD  T+  ++ GL +A ++
Sbjct: 1083 EMVAKNLQPDVMTFGALIDGLCKAGQV 1109



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 217/456 (47%), Gaps = 48/456 (10%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT----------------- 191
           G + T+  +   ++ L       +A  +FRS       PN +T                 
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 192 -----------------YNALMDGYCKVADVNRALE-FYHEMLHHNLQPNVVTFGVLMDG 233
                            YN ++   C+  +  RALE F  EM    + P +VT+  +++G
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCK  EL A    F  + + G  P++  YN LID  CKAG+L EA  L  +M      P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEG--ILANVVTYNSLIDGYCKEGDMEKALSV 351
           V TY++LI GLC VG+++ A  L+Q+M ++   +L N++TYNS +DG CK+    +A  +
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 352 CSQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
              + +    V P+ VTFS+LIDG CK G ID A  ++ +M+    VP+V+ + AL++GL
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   M+    + + M++  +TP V T S L+    K  R+  AL        +     C
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG----C 461

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMR-SDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           +PN V + +II  LC   +  +A ++F DM     L PD  TY T++ GL R  R     
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            LL  M      PD       + G  + GD+  A +
Sbjct: 522 ALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQ 553



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 187/342 (54%), Gaps = 19/342 (5%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWE 105
            N   +S LI    ++G I+EA  + +++     +VLP I   N+ L+GL K+       E
Sbjct: 779  NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838

Query: 106  FYEEMVLCGL--VADVVTYGVLID--CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                +    L    D VT+  LID  C CGQ D  +A N+FD+MI  G  P VV Y +L+
Sbjct: 839  LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD--EACNVFDDMIAGGYVPNVVTYNVLM 896

Query: 162  HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            +GLC  +KM  A +M  SM + GV P++ TY+ L+D +CK + V+ ALE  H M      
Sbjct: 897  NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956

Query: 222  PNVVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PNVVTF  ++DGLCK  +   A   F  M  K G+ P+   Y  LIDG  + G   +A  
Sbjct: 957  PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEV 1016

Query: 281  LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
            L   M      PD + +N  I GL  +G +  A   L +M +  ++ + VT+N LI G C
Sbjct: 1017 LLDAMP----DPDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGAC 1069

Query: 341  KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            K G+ E+A ++  +M  K ++P+V+TF +LIDG CKAG ++A
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 1111



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 124/325 (38%), Gaps = 83/325 (25%)

Query: 307 VGQLEGAEGLLQKMYK-----EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           + QL+G   L  + Y       G    + ++N  ++   K G   KA+ +          
Sbjct: 84  LAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCR 143

Query: 362 PNVVTFSSLIDGQCKA-GNIDAAMGLYT-------------------------------- 388
           PN  T+S+L+    KA G+++  +G +                                 
Sbjct: 144 PNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIF 203

Query: 389 --EMVIKSLVPDVVVFTALIDGLSKD---------------------------------- 412
             EM    + P +V +  +I+GL K                                   
Sbjct: 204 RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCK 263

Query: 413 -GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS- 470
            G+++E  RL+ +M      P+V T S LI+GL K GRI  A     E T K+    C  
Sbjct: 264 AGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS----CDV 319

Query: 471 -PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR--PDNCTYTTMLRGLLRAKRMLDV 527
            PN + Y + +  LC      +A +L   +R  +LR  PD  T++T++ GL +  ++ + 
Sbjct: 320 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 379

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
             +  DMI  G VP+ +    +V G
Sbjct: 380 CSVFDDMIAGGYVPNVITYNALVNG 404



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%)

Query: 47   IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            +P  +   F+  I   S++G +  AL    ++E++P     N L+ G  K G F+     
Sbjct: 1021 MPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
            +EEMV   L  DV+T+G LID  C  G V
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/510 (32%), Positives = 266/510 (52%), Gaps = 45/510 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P++ + N LL+GL K   +  V+  Y +M L GL +D  T  +L++C C    + +    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  ++ +G  P +V Y  LI GLC E+++ EA  +F  M++ G  P++ TY  L+ G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 202 VADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
             ++N AL+ + EML+       N +PNV+T+ +++DGLCKVG    A   F  M   G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+I  YN LI G C AG   E+  L  EM    + PD+ T+N+LI  LC  G++  A+ 
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL  M + GI+ ++VTYNSLI+G+C  GD+  A  +   M  KG EP+V++++ LI+G  
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTAL------------------------------ 405
           K   ++ AM LY EM++    P+V+ + +L                              
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 406 -----IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
                +DGL K+  + E ++L+ E+  +     +  ++ LI GL K G++  A   F   
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF--- 483

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +K       PN V Y  +I   C +GQ+ KA+ L   M ++   PD  TY T++RG   
Sbjct: 484 -EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 542

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + ++ +V+ LL  M +  + PDA+   ++V
Sbjct: 543 SNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 217/413 (52%), Gaps = 9/413 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFDSVW 104
            + TLI      G+I  AL ++++         I   P +   N +++GL K G+ D   
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + +EEM   G++  +++Y  LI   C  G   ++  L DEM+D+G++P +V + +LI  L
Sbjct: 236 QLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTL 295

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E K++EA+ +   M E G+VP+L TYN+L++G+C V D+N A E +  M     +P+V
Sbjct: 296 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 355

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +++ VL++G  K  ++  A   +  M   G  PN+  Y+ L+ G   AG + +A  L S 
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+   I+ + +TY I + GLC    L  A  L  ++        +   N LIDG CK G 
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A  +  +++ +G EPNVVT++ +I G C+ G +D A  L  +M      PD++ +  
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           L+ G  +   ++E ++L   M +  ++P   T S ++  L K+ +    L+  
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 215/388 (55%), Gaps = 4/388 (1%)

Query: 38  VFNALNSLEIP-KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           + N ++  EI  K N   ++ ++    ++G  +EA  ++ +++   ++P+I + N+L++G
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHG 259

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
               GK++      +EM+  GL  D+VT+ VLID  C +G V++A  L   MI+ GI P 
Sbjct: 260 FCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 319

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V Y  LI G C    +  A  +F SM   G  P++ +YN L++GY K   V  A++ Y+
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML    +PNV+T+  L+ G+   G++  A   F  M   G+  N + Y   +DG CK  
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 439

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            LFEAM L +E++      ++   N LI GLC  G+LE A  L +K+  EG   NVVTY 
Sbjct: 440 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            +I G+C+EG ++KA  +  +M   G  P+++T+++L+ G  ++  ++  + L   M  K
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 559

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRL 421
            + PD +  + ++D LSKD   +E L L
Sbjct: 560 DVSPDAITCSIVVDMLSKDEKYQECLHL 587



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 230/479 (48%), Gaps = 45/479 (9%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L  C  G      AL+ F  M+     P++  +  L+ GL       +  S++  MR  G
Sbjct: 40  LRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSG 99

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           +  +  T N L++  C V  +      +  +L     PN+VT+  L+ GLC    +  A 
Sbjct: 100 LSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEAT 159

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM----EKFEIS--PDVFTYN 298
             F+ M K G  P++  Y  LI G C  GN+  A+ L  EM     ++EI+  P+V TYN
Sbjct: 160 RLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYN 219

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY------------------- 339
           I++ GLC VG+ + A+ L ++M  +G++ ++++YNSLI G+                   
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279

Query: 340 ----------------CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
                           CKEG + +A  +   M E G+ P++VT++SLI+G C  G++++A
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L+  M  K   PDV+ +  LI+G SK   ++E ++LY EML     P+V T  SL+ G
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           +F  G++ +A   F     K  G   + N   Y   +  LC +  + +A KLF++++S N
Sbjct: 400 IFLAGKVDDAKKLF--SVMKAHG--IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + +      ++ GL +A ++     L   +   G  P+ V   +M+ G+   G +  A
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 45/446 (10%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L+ GL  + +       +  M   G   DVVTYG LI   CG G++  AL L
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196

Query: 142 FDEMIDK------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             EM++         +P V+ Y I++ GLC   +  EA+ +F  M+  G++P++ +YN+L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK------------------- 236
           + G+C       +     EML   LQP++VTF VL+D LCK                   
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316

Query: 237 ----------------VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
                           VG+L +A   FV M   G  P++  YN LI+G+ K   + EAM 
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L +EM      P+V TY+ L+KG+   G+++ A+ L   M   GI  N  TY   +DG C
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K   + +A+ + +++     +  +   + LIDG CKAG ++ A  L+ ++  +   P+VV
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 496

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T +I G  ++G + +   L ++M     TP + T ++L+ G +++ ++   +   L +
Sbjct: 497 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ-LLHR 555

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYD 486
             + D    SP+ +  + ++  L  D
Sbjct: 556 MAQKD---VSPDAITCSIVVDMLSKD 578



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 209/427 (48%), Gaps = 10/427 (2%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   I   L H          A   F  M      P+L ++N L+ G  K+   ++    
Sbjct: 32  PNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSL 91

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y++M    L  +  T  +L++ LC V  LR     F  + + G  PNI  YN LI G C 
Sbjct: 92  YNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCM 151

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM------YKEGI 325
              + EA  L   M+K   +PDV TY  LIKGLCG G +  A  L Q+M      Y+   
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NV+TYN ++DG CK G  ++A  +  +M  +G+ P++++++SLI G C AG  + +  
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM+ + L PD+V F  LID L K+G + E  +L   M+E+ I P + T +SLI G  
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G +++A   F+    K     C P+ + Y  +I       ++ +A KL+++M     R
Sbjct: 332 MVGDLNSARELFVSMPSKG----CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR 387

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  TY ++L+G+  A ++ D   L + M   GI  ++    + + G  +N  L  A + 
Sbjct: 388 PNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKL 447

Query: 566 SEFLKES 572
              LK S
Sbjct: 448 FTELKSS 454



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 18/405 (4%)

Query: 184 GVVPNLYTYNALMDGYCKVADVN--RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             +P+     A    +CK  +V    AL F+H M+     P++ +F  L+ GL K+    
Sbjct: 27  SAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYS 86

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
              + +  M   G+  +    N L++  C    L E  +  + + +   SP++ TYN LI
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT----- 356
           KGLC   ++  A  L  +M K G   +VVTY +LI G C  G++  AL +  +M      
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISR 206

Query: 357 -EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            E   +PNV+T++ ++DG CK G  D A  L+ EM  + ++P ++ + +LI G    G  
Sbjct: 207 YEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKW 266

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPN 472
           +E+ RL  EML+  + P + T + LI  L K G++  A   L   +E           P+
Sbjct: 267 EESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG-------IVPD 319

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y ++I+  C  G +  A +LF  M S    PD  +Y  ++ G  +  ++ + M L  
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           +M+ +G  P+ +    +++G    G +  A +    +K   I  +
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 192/613 (31%), Positives = 312/613 (50%), Gaps = 52/613 (8%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRK--PHHVCYSVFNALNSLEIPKFNPSVFSTL 58
           + ++L  A++Y +A   +K+    L+ SR+  P    + V  +  ++ +P F   VF  L
Sbjct: 135 LVHILFYARMYFDANFFLKE----LISSRRILPGFDVFEVLWSTRNVCVPGF--GVFDAL 188

Query: 59  IIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
              F E+G +EEA   + ++    V P  ++CNA L  L K GK D   +F+ +MV  G+
Sbjct: 189 FSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGI 248

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
              V TY ++I   C +GD++ A +LF +M   G+ P +V Y  LI G      + E+  
Sbjct: 249 AQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  M++ G  P++ TYNAL++ +CK   + +A  F HEM +  L+PNVVT+  L+D LC
Sbjct: 309 LFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALC 368

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K   L+ A  F + M + G+ PN F Y  LID +CKAG L +A+ L  EM + ++  +V 
Sbjct: 369 KEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVV 428

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  L+ GLC  G++  AE L + M K G+  N+ TY +L+ G+ K   +E AL +  ++
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEI 488

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EK ++P+++ + ++I G C    ++    + +EM    +  + V++T  +D   K G  
Sbjct: 489 KEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV- 474
            E L L +EM +  +  ++ T   LI GL K G +  A+++F    D        PN+V 
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFN----LQPNNVA 604

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM------ 528
           +  A+I  LC +  I  A KLF +M+  N+ PD   YT ++ G L+ K   + +      
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM 664

Query: 529 -----------------------------MLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                                        M L +MI  GIVPD ++   ++R Y E G +
Sbjct: 665 SELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSI 724

Query: 560 KSAFRC-SEFLKE 571
             A     E LK+
Sbjct: 725 DEAIELHDELLKK 737



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 155/346 (44%), Gaps = 42/346 (12%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDS---- 102
           FN   ++TL+    + G + EA  ++R   K  V P ++   AL++G IK  + ++    
Sbjct: 425 FNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALEL 484

Query: 103 -------------------VW-----------EF-YEEMVLCGLVADVVTYGVLIDCCCG 131
                              +W           EF   EM  CG+ A+ V Y + +D    
Sbjct: 485 LKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFK 544

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-LY 190
            G  ++ALNL  EM D G+E T+V + +LI GLC +  + EA   F  M +  + PN + 
Sbjct: 545 TGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA 604

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
              AL+DG CK   +  A + + EM   N+ P+ + +  L+DG  K  + + A N    M
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM 664

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
           ++ G+  ++  Y  L+ G  +   + +A    +EM    I PD      L++    +G +
Sbjct: 665 SELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSI 724

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDG---YCKEGDMEKALSVCS 353
           + A  L  ++ K+  L  ++   +L+      C++GD       C+
Sbjct: 725 DEAIELHDELLKKVPLDELLEEQNLMPEKILRCRDGDGYDWKETCT 770



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 4/244 (1%)

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +++L   + + G +E+A    S+MT   V P   + ++ +    K G  D +   + +MV
Sbjct: 185 FDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMV 244

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              +   V  +  +I  + K+G+M     L+ +M +  +TP + T +SLI G  K G + 
Sbjct: 245 GAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLD 304

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            +   F E  D      C P+ + Y A+I   C   Q+ KA     +M++  L+P+  TY
Sbjct: 305 ESFCLFEEMKDVG----CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTY 360

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +T++  L +   +   +  L DM ++G+ P+      ++    + G L  A + ++ + +
Sbjct: 361 STLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQ 420

Query: 572 SRIG 575
            ++G
Sbjct: 421 VQVG 424


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 173/537 (32%), Positives = 269/537 (50%), Gaps = 19/537 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           F P V  FSTL+        + EAL ++ ++   P +     L+NGL ++G+        
Sbjct: 143 FQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-CRPNVVTFTTLMNGLCREGRVVEAVALL 201

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCN 166
           + MV  GL  + +TYG ++D  C  GD + ALNL  +M +   I+P VVIY+ +I GL  
Sbjct: 202 DRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWK 261

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + +  +A +++  M+E G+ P+L+TYN ++DG+C     + A     EML   + PNVVT
Sbjct: 262 DGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVT 321

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L++   K  +   A   +  M   G+ PN   YN +IDG CK   L  A  +   M 
Sbjct: 322 YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMA 381

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               SPDVFT+N LI G CG  +++    LL +M + G++A+  TYN+LI G+C  GD+ 
Sbjct: 382 TKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-----------VIKSL 395
            AL +  QM   GV P++VT ++L+DG C  G +  A+ ++  M               +
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDV  +  LI GL  +G   E   LYKEM    I P+  T SS+I+GL K  R+  A  
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    D       SP+ V +  ++   C  G++    +LF +M    +  D  TY T++
Sbjct: 562 MF----DSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            G  +   +   + +  +MI  G+ PD +  + M+       +LK A    E L+ S
Sbjct: 618 HGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674



 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 287/584 (49%), Gaps = 85/584 (14%)

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F E+  +E+A+ ++  +     LP++   N L+  +++  + D V   Y++M    +  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DV ++ +LI C C    +  AL+ F ++   G +P VV ++ L+HGLC E+++ EA  +F
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M      PN+ T+  LM+G C+   V  A+     M+   LQPN +T+G ++DG+CK+
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 238 GE-------LRA-----------------------------AGNFFVHMAKFGVFPNIFV 261
           G+       LR                              A N +  M + G+FP++F 
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YNC+IDG C +G   EA  L  EM + +I+P+V TY+ LI       +   AE L  +M 
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI+ N +TYNS+IDG+CK+  ++ A  +   M  KG  P+V TF++LIDG C A  ID
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRID 406

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
               L  EM    LV D   +  LI G    G++   L L ++M+ + + P + T ++L+
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466

Query: 442 HGLFKNGRISNALNFF--LEKTDK--------------------------TDGGYCS--- 470
            GL  NG++ +AL  F  ++K+                             +G +     
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526

Query: 471 -----------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                      PN + Y+++I  LC   ++ +A+++F  M S +  PD  T+ T++ G  
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +A R+ D + L  +M + GIV DA+    ++ G+++ G++  A 
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGAL 630



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 223/438 (50%), Gaps = 9/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+V+ +  L+  +    +     S+++ M    +  ++Y++N L+ 
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++     QP+VVTF  L+ GLC    +  A + F  M +    P
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----P 176

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P+  TY  ++ G+C +G    A  LL
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I  NVV Y+++IDG  K+G    A ++ ++M EKG+ P++ T++ +IDG C 
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCS 296

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + P+VV ++ALI+   K+    E   LY EML   I P+  T
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S+I G  K  R+  A + F     K     CSP+   +  +I   C   +I   ++L 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKG----CSPDVFTFNTLIDGYCGAKRIDDGTELL 412

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + L   MI  G+ PD V    ++ G  +N
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 473 GKLKDALEMFKAMQKSKM 490



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 201/397 (50%), Gaps = 9/397 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  M     +P++  +N LM    ++   +  +  Y +M    +  +V +F +L+
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILI 119

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C   +L  A + F  + K G  P++  ++ L+ G C    + EA+ L  +M +    
Sbjct: 120 KCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR---- 175

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V T+  L+ GLC  G++  A  LL +M ++G+  N +TY +++DG CK GD   AL++
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 352 CSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             +M E   ++PNVV +S++IDG  K G    A  LYTEM  K + PD+  +  +IDG  
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G   E  RL +EMLE KI P+V T S+LI+   K  +   A   + E   +       
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG----II 351

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y ++I   C   ++  A  +F  M +    PD  T+ T++ G   AKR+ D   L
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           L +M + G+V D      ++ G+   GDL +A   S+
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 188/360 (52%), Gaps = 9/360 (2%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +M+     P+V+ F  LM  + ++       + +  M +  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +++ +N LI   C    L  A+S   ++ K    PDV T++ L+ GLC   ++  A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M +     NVVT+ +L++G C+EG + +A+++  +M E G++PN +T+ +++DG 
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  +  + P+VV+++A+IDGL KDG   +   LY EM E  I P 
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT + +I G   +GR S A     E  ++      +PN V Y+A+I A   + +  +A 
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERK----INPNVVTYSALINAYVKERKFFEAE 339

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L+ +M    + P+  TY +M+ G  +  R+     +   M   G  PD      ++ GY
Sbjct: 340 ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGY 399


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 268/500 (53%), Gaps = 7/500 (1%)

Query: 68  IEEALW-VYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I++AL   YR + +   P++      L  + KK ++ S      +M L G+  +V +  V
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+C C    V  A+++  +M   GI+P  + +  LI+GLCNE K+ EA  +F  M   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             PN+ +YN +++G CK  +   A+  + +M  +  +PNVVT+  ++D LCK   +  A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
            F   M   G+ P++  YN ++ G C  G L EA  L  EM    + PD  T+NIL+ GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A  + + M ++G   N  TYN+L+DGYC    M++A+ V   M  KG  PN+
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            +++ LI+G CK+  ++ A  L +EM  K+L PD V ++ L+ GL + G  +E L L+KE
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M  + + P +   S L+ G  K+G +  AL    E  ++       PN +LY  +I+ + 
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR----IKPNIILYTILIRGMF 492

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A +LFS + +D +RPD  TY  M++GLL+     +       M   G +PD+ 
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552

Query: 545 INQVMVRGYQENGDLKSAFR 564
              V+++G+ +N D  +A +
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQ 572



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 250/467 (53%), Gaps = 4/467 (0%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + + N L+N L +    D       +M   G+  D +T+  LI+  C +G + +A+ LF+
Sbjct: 131 VYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+  G EP V+ Y  +I+GLC     + A  +FR M +    PN+ TYN ++D  CK  
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR 250

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            VN A+EF  EM+   + P+VVT+  ++ G C +G+L  A   F  M    V P+   +N
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+DG CK G + EA  +   M +    P+ +TYN L+ G C   Q++ A  +L  M  +
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   N+ +YN LI+GYCK   M +A  + S+M+EK + P+ VT+S+L+ G C+ G    A
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L+ EM    L+PD++ ++ L+DG  K G++ E L+L KEM E +I P++   + LI G
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           +F  G++  A   F     K       P+   Y  +I+ L  +G   +A + F  M  D 
Sbjct: 491 MFIAGKLEVAKELF----SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
             PD+C+Y  +++G L+ +     + L+ +M+      D+   Q+++
Sbjct: 547 FLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/409 (33%), Positives = 201/409 (49%), Gaps = 40/409 (9%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V S  T+I    + G+   A+ V+RK+E     P +   N +++ L K    +   EF
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             EMV  G+  DVVTY  ++   C  G + +A  LF EM+ + + P  V + IL+ GLC 
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMD----------------------------- 197
           E  + EA  +  +M E G  PN YTYNALMD                             
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378

Query: 198 ------GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
                 GYCK   +N A     EM   NL P+ VT+  LM GLC+VG  R A N F  M 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+ P++  Y+ L+DG CK G+L EA+ L  EM +  I P++  Y ILI+G+   G+LE
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ L  K+  +GI  ++ TYN +I G  KEG  ++A     +M + G  P+  +++ +I
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            G  +  +   A+ L  EMV K    D   F  L+D  S D  +   +R
Sbjct: 559 QGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRFMR 607



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 216/409 (52%), Gaps = 4/409 (0%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N+  + +A + F  M      P++  +   +    K    + A+   ++M    +  NV 
Sbjct: 73  NDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVY 132

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           +  VL++ LC++  +  A +    M K G+ P+   +N LI+G C  G + EA+ L +EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P+V +YN +I GLC  G    A  + +KM +     NVVTYN++ID  CK+  +
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+   S+M ++G+ P+VVT+++++ G C  G ++ A  L+ EMV ++++PD V F  L
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DGL K+G + E   + + M E    P+ +T ++L+ G   + ++  A+           
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL----GIMI 368

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           G  C+PN   Y  +I   C   ++ +A +L S+M   NL PD  TY+T+++GL +  R  
Sbjct: 369 GKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + + L  +M   G++PD +   +++ G+ ++G L  A +  + + E RI
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 173/519 (33%), Positives = 270/519 (52%), Gaps = 13/519 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F  L+     M   +  + +Y+K+E   +   I +   L+       K       
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + ++   GL  DVVT+  L+   C +  V +ALNLF +M +    P VV +T L++GLC 
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVV 225
           E ++VEA ++   M E G+ P   TY  ++DG CK+ D   AL+   +M    ++ PNVV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D LCK G    A N F  M + G+FP++F YN +I G C +G   +A  L  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +ISPDV TYN LI      G+   AE L  +M   GI+ N +TY+S+IDG+CK+  +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +   M  KG  PN++TF++LIDG C A  ID  M L  EM    LV D   +  L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK 463
           I G    G++   L L +EM+ + + P + T  +L+ GL  NG++ +AL  F  ++K+ K
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 464 T-DGGY----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             D  +      P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M+ GL
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 241/462 (52%), Gaps = 26/462 (5%)

Query: 13  NARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEAL 72
           +  C I D    L   RK   + + + N +           ++S +I +  + G   +A 
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPNVV-----------IYSAIIDSLCKDGRHSDAQ 275

Query: 73  WVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
            ++ +++   + P +   N+++ G    G++    +  +EM+   +  DVVTY  LI+  
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
             +G   +A  L+DEM+ +GI P  + Y+ +I G C +N++  AE MF  M   G  PNL
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            T+N L+DGYC    ++  +E  HEM    L  +  T+  L+ G   VG+L AA +    
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYN 298
           M   G+ P+I   + L+DG C  G L +A+ +   M+K +           + PDV TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           ILI GL   G+   AE L ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
              PNVVTF++LI+G CKAG +D  + L+ EM  + +V + + +  LI G  K GN+   
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           L +++EM+ + + P   T+ +++ GL+    +  A+   LEK
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA-MLEK 676



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 220/459 (47%), Gaps = 50/459 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TL+      G I EA+ +  ++    + P       +++G+ K G   S  +  
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242

Query: 108 EEMV-LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +M  +  ++ +VV Y  +ID  C  G    A NLF EM +KGI P +  Y  +I G C+
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +  +AE + + M E  + P++ TYNAL++ + K      A E Y EML   + PN +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++DG CK   L AA + F  MA  G  PN+  +N LIDG+C A  + + M L  EM 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +  D  TYN LI G   VG L  A  LLQ+M   G+  ++VT ++L+DG C  G ++
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 347 KALS----------------------------------------------VCSQMTEKGV 360
            AL                                               +  +M  +G+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ +T+SS+IDG CK   +D A  ++  M  KS  P+VV FT LI+G  K G + + L 
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           L+ EM    I  +  T  +LI G  K G I+ AL+ F E
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 223/437 (51%), Gaps = 5/437 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++  L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A N F  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C +G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSPN + +  +I   C   +I    +L 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKG----CSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + LL +MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESR 573
           G LK A    + +++S+
Sbjct: 479 GKLKDALEMFKVMQKSK 495



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 204/405 (50%), Gaps = 40/405 (9%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +ML     P+VV F  LM  + ++       + +  M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +I+ +  LI   C    L  A+S   ++ K  + PDV T+N L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M++     NVVT+ +L++G C+EG + +A+++  +M E G++P  +T+ +++DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  I  ++P+VV+++A+ID L KDG   +   L+ EM E  I P 
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT +S+I G   +GR S+A     E  ++      SP+ V Y A+I A   +G+  +A 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERK----ISPDVVTYNALINAFVKEGKFFEAE 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLR--------------------------------- 520
           +L+ +M    + P+  TY++M+ G  +                                 
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405

Query: 521 --AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             AKR+ D M LL +M + G+V D      ++ G+   GDL +A 
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 14/284 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  +     I++ + +  ++    ++      N L++G    G  ++  +  
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM------ID-----KGIEPTVVI 156
           +EM+  GL  D+VT   L+D  C  G +  AL +F  M      +D      G+EP V  
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y ILI GL NE K +EAE ++  M   G+VP+  TY++++DG CK + ++ A + +  M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVVTF  L++G CK G +      F  M + G+  N   Y  LI G  K GN+ 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            A+ +  EM    + PD  T   ++ GL    +L+ A  +L+K+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + ++TLI  F  +G +  AL + +++    + P I  C+ LL+GL   GK     E +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488

Query: 108 EEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + M              G+  DV TY +LI     +G  ++A  L++EM  +GI P  + 
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I GLC ++++ EA  MF SM      PN+ T+  L++GYCK   V+  LE + EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  N +T+  L+ G  KVG +  A + F  M   GV+P+      ++ G      L 
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 277 EAMSLCSEMEKFEISPDV 294
            A+++   +EK ++S D+
Sbjct: 669 RAVAM---LEKLQMSMDL 683


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  294 bits (752), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 184/573 (32%), Positives = 290/573 (50%), Gaps = 37/573 (6%)

Query: 49  KFNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           +F+PS    S+L+    + G IEEAL + +++    V P +   NAL++ L K  KF   
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              ++ M   GL  + VTY +LID  C +G +  AL+   EM+D G++ +V  Y  LI+G
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C    +  AE     M    + P + TY +LM GYC    +N+AL  YHEM    + P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + TF  L+ GL + G +R A   F  MA++ V PN   YN +I+G+C+ G++ +A     
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +  I PD ++Y  LI GLC  GQ   A+  +  ++K     N + Y  L+ G+C+EG
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+ALSVC +M ++GV+ ++V +  LIDG  K  +     GL  EM  + L PD V++T
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG--------------- 448
           ++ID  SK G+ KE   ++  M+     P+  T +++I+GL K G               
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746

Query: 449 -RISNALNF--FLEKTDKTDGGYCS-------------PNHVLYAAIIQALCYDGQILKA 492
             + N + +  FL+   K +                   N   Y  +I+  C  G+I +A
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEA 806

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S+L + M  D + PD  TYTTM+  L R   +   + L   M + GI PD V    ++ G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866

Query: 553 YQENGDLKSAFRC-SEFLKESRIGSSETEGHTT 584
               G++  A    +E L++  I +++T   TT
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 261/513 (50%), Gaps = 8/513 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           F  LI  +     + + + V++    K+ +LP ++  +ALL+GL+K   F    E + +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+  DV  Y  +I   C   D+ +A  +   M   G +  +V Y +LI GLC + K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + +    + P++ TY  L+ G CKV +    LE   EML     P+      L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GL K G++  A N    +  FGV PN+FVYN LID  CK     EA  L   M K  +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TY+ILI   C  G+L+ A   L +M   G+  +V  YNSLI+G+CK GD+  A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             ++M  K +EP VVT++SL+ G C  G I+ A+ LY EM  K + P +  FT L+ GL 
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G +++ ++L+ EM E  + P+  T + +I G  + G +S A  F  E T+K       
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG----IV 574

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  +I  LC  GQ  +A      +   N   +   YT +L G  R  ++ + + +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +M++ G+  D V   V++ G  ++ D K  F
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 228/550 (41%), Gaps = 128/550 (23%)

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAES------------------MFRSMREC---- 183
           + +G + +   + ILIH L   N    A S                  +F    +C    
Sbjct: 96  LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155

Query: 184 -------------------------------GVVPNLYTYNALMDGYCKVADVNRALEFY 212
                                           ++P + T +AL+ G  K      A+E +
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           ++M+   ++P+V  +  ++  LC++ +L  A     HM   G   NI  YN LIDG CK 
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV------------------------- 307
             ++EA+ +  ++   ++ PDV TY  L+ GLC V                         
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335

Query: 308 ----------GQLEGAEGLLQKMYKEGILANVVTYNSLIDG------------------- 338
                     G++E A  L++++   G+  N+  YN+LID                    
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 339 ----------------YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
                           +C+ G ++ ALS   +M + G++ +V  ++SLI+G CK G+I A
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A G   EM+ K L P VV +T+L+ G    G + + LRLY EM    I PS++T ++L+ 
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GLF+ G I +A+  F E  +        PN V Y  +I+  C +G + KA +   +M   
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWN----VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + PD  +Y  ++ GL    +  +  + +  + K     + +    ++ G+   G L+ A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 563 FR-CSEFLKE 571
              C E ++ 
Sbjct: 632 LSVCQEMVQR 641


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 266/513 (51%), Gaps = 8/513 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I   ++ G + +A+ ++ ++ +    P     N L++G +K        E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM    L     TY VLI   C   D+ KA  + D+MI  G++P V +Y  LI    
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E++   A  + + M   GV+P+L+ YN L+ G C+   V  A     +M    ++PN  
Sbjct: 498 QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G  ++   K GE++ A  +F  M   G+ PN  +Y  LI GHC  GN  EA+S    M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  + PD+  Y+ +I  L   G+ + A G+  K  K G++ +V  YNSLI G+CKEGD+
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           EKA  +  +M   G+ PN+V +++LI+G CK G +  A  L+ E+  K LVPDVV ++ +
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K GN+ E  +L+ EM+   I+P  +    LI G  K G +  AL+ F E   K+ 
Sbjct: 738 IDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 797

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           G   + N     ++I + C  G++++A +LF DM    L P+  TYT ++    +A+ M 
Sbjct: 798 GSLSAFN-----SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 852

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +   L  DM    I+P+ +    ++  Y + G+
Sbjct: 853 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/553 (32%), Positives = 281/553 (50%), Gaps = 7/553 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++  I    + G ++EAL V + +    + P       L++G  K+ +      
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +E M   GL  +  TY  LID    +G++ +AL + DEMI +G++  VV Y  +I G+ 
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +M +A S+F  M   G+ P+ +TYN L+DGY K  D+ +A E   EM    L P+  
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ VL+ GLC   +L+ A      M + GV PN+F+Y  LI  + +      A+ L   M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD+F YN LI GLC   ++E A+ LL  M ++GI  N  TY + I+ Y K G++
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A      M   G+ PN V ++ LI G C  GN   A+  +  M+ K L+PD+  ++A+
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  LSK+G  KE + ++ + L+  + P VF  +SLI G  K G I  A   +    D+  
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY----DEML 688

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               +PN V+Y  +I  LC  G++ KA +LF ++   +L PD  TY+T++ G  ++  + 
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTR 585
           +   L  +MI  GI PD  I  +++ G  + G+L+ A       ++  +GS         
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808

Query: 586 SFLGHLKPTVYKE 598
           SF  H K    +E
Sbjct: 809 SFCKHGKVIEARE 821



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 260/493 (52%), Gaps = 8/493 (1%)

Query: 55   FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            ++ LII       +EEA  +   +    + P      A +N   K G+      ++++M+
Sbjct: 524  YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 112  LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              G+V + V Y +LI   C  G+ ++AL+ F  M++KG+ P +  Y+ +IH L    K  
Sbjct: 584  SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            EA  +F    + GVVP+++ YN+L+ G+CK  D+ +A + Y EMLH+ + PN+V +  L+
Sbjct: 644  EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            +GLCK+GE+  A   F  + +  + P++  Y+ +IDG+CK+GNL EA  L  EM    IS
Sbjct: 704  NGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS 763

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            PD + Y ILI G    G LE A  L  +  ++ +  ++  +NSLID +CK G + +A  +
Sbjct: 764  PDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEAREL 822

Query: 352  CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
               M +K + PN+VT++ LID   KA  ++ A  L+ +M  ++++P+ + +T+L+   ++
Sbjct: 823  FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 882

Query: 412  DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             GN  + + L+K+M    I         +     K G+   AL       +K+       
Sbjct: 883  IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL----NKSLVEGIKL 938

Query: 472  NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               ++ A+I  LC + QI    +L S+M  + L   + T  T+L G  ++    +   +L
Sbjct: 939  EDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 998

Query: 532  ADMIKMGIVPDAV 544
              M ++G VP ++
Sbjct: 999  GVMQRLGWVPTSL 1011



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 239/470 (50%), Gaps = 27/470 (5%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVF------------------NALNSLE 46
           L  AK  + A+ L+ D+ E   K  KP+   Y  F                  + L+S  
Sbjct: 531 LCRAKKVEEAKMLLVDMGE---KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           +P  N  +++ LI    ++G+  EAL  ++   +  ++P I+A +A+++ L K GK    
Sbjct: 588 VP--NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + + +  G+V DV  Y  LI   C +GD+ KA  L+DEM+  GI P +V+Y  LI+G
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLING 705

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   ++ +A  +F  + E  +VP++ TY+ ++DGYCK  ++  A + + EM+   + P+
Sbjct: 706 LCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
              + +L+DG  K G L  A + F H A+     ++  +N LID  CK G + EA  L  
Sbjct: 766 GYIYCILIDGCGKEGNLEKALSLF-HEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFD 824

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M   +++P++ TY ILI        +E AE L   M    I+ N +TY SL+  Y + G
Sbjct: 825 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 884

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +  K +S+   M  +G+  + + +  +    CK G    A+ L  + +++ +  +  VF 
Sbjct: 885 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 944

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           ALI  L K+  +   L L  EM + +++ S  T ++L+ G +K+G    A
Sbjct: 945 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 994



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 224/493 (45%), Gaps = 40/493 (8%)

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           +++  + + ID     G + +A ++F   I +G  PT++    L+  L   N M     +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 177 FRSMRECGVVP----------------------------------NLYTYNALMDGYCKV 202
           + SM E  +VP                                  NL+TYNA + G C+ 
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQT 289

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V+ ALE    M+   L P+  T+ +L+DG CK    + A   F  M   G+ PN F Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             LIDG  K GN+ EA+ +  EM    +  +V TYN +I G+   G++  A  L  +M  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G+  +  TYN LIDGY K  DM KA  + ++M  + + P+  T+S LI G C + ++  
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  +  +M+   + P+V ++  LI    ++   +  + L K M+   + P +F  + LI 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL +  ++  A    ++  +K       PN   Y A I      G+I  A + F DM S 
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKG----IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + P+N  YT +++G       ++ +     M++ G++PD      ++    +NG  K A
Sbjct: 586 GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645

Query: 563 FRCSEFLKESRIG 575
                FLK  + G
Sbjct: 646 MGV--FLKFLKTG 656



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 182/357 (50%), Gaps = 6/357 (1%)

Query: 52   PSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            P VF  ++LI  F + G IE+A  +Y ++    + P I   N L+NGL K G+     E 
Sbjct: 659  PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            ++E+    LV DVVTY  +ID  C  G++ +A  LFDEMI KGI P   IY ILI G   
Sbjct: 719  FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            E  + +A S+F   ++  V  +L  +N+L+D +CK   V  A E + +M+   L PN+VT
Sbjct: 779  EGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 837

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            + +L+D   K   +  A   F+ M    + PN   Y  L+  + + GN F+ +SL  +ME
Sbjct: 838  YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               I+ D   Y ++    C  G+   A  LL K   EGI      +++LI   CKE  + 
Sbjct: 898  ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIS 957

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
              L + S+M ++ +  +  T ++L+ G  K+GN D A  +   M     VP  +  T
Sbjct: 958  TVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 190/397 (47%), Gaps = 23/397 (5%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+IL   LCN   + +A++M   + +    P L   ++L+  Y +               
Sbjct: 123 YSILAIRLCNSGLIHQADNMLEKLLQTRK-PPLEILDSLVRCYREFGG------------ 169

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                 N+  F + +D    +G L  A + F+     G FP +   N L+    KA  + 
Sbjct: 170 -----SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
               +   M + +I PDV+TY  +IK  C VG +   + +L +M KE    N+ TYN+ I
Sbjct: 225 LFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFI 283

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G C+ G +++AL V   M EKG+ P+  T++ L+DG CK      A  ++  M    L 
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   +TALIDG  K+GN++E LR+  EM+   +  +V T +++I G+ K G ++ A++ 
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E           P+   Y  +I        + KA +L ++M++  L P   TY+ ++ 
Sbjct: 404 FNEML----MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           GL  +  +     +L  MI+ G+ P+  +   +++ Y
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 28/302 (9%)

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ID   +  N F   S      K      + +Y+IL   LC  G +  A+ +L+K+ +   
Sbjct: 97  IDDSVRLQNFFYWSS-----SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTR- 150

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              +   +SL+  Y + G                   N+  F   ID     G ++ A  
Sbjct: 151 KPPLEILDSLVRCYREFGG-----------------SNLTVFDIFIDKFRVLGFLNEASS 193

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           ++   + +   P ++    L+  L K   M    ++Y  M+EAKI P V+T +++I    
Sbjct: 194 VFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHC 253

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G +       L + +K     C PN   Y A I  LC  G + +A ++   M    L 
Sbjct: 254 KVGDVIKG-KMVLSEMEKE----CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG 308

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD  TYT ++ G  + KR  +  ++   M   G+ P+      ++ G+ + G+++ A R 
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 566 SE 567
            +
Sbjct: 369 KD 370


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 174/519 (33%), Positives = 269/519 (51%), Gaps = 13/519 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F  L+     M   +  + +Y+K+E   +   I + N L+       K       
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + ++   GL  DVVT+  L+   C +  V +ALNLF +M +    P VV +T L++GLC 
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVV 225
           E ++VEA ++   M E G+ P   TY  ++DG CK  D   AL    +M    ++ PNVV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D LCK G    A N F  M + G+FP++F YN +I G C +G   +A  L  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +ISPDV TYN LI      G+   AE L  +M   GI+ N +TY+S+IDG+CK+  +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +   M  KG  PN++TF++LIDG C A  ID  M L  EM    LV D   +  L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK 463
           I G    G++   L L +EM+ + + P + T  +L+ GL  NG++ +AL  F  ++K+ K
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 464 T-DGGY----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             D  +      P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M+ GL
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 237/443 (53%), Gaps = 22/443 (4%)

Query: 37  SVFNALNSLE-----IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACN 88
           S  N L  +E     IP  N  ++S +I +  + G   +A  ++ +++   + P +   N
Sbjct: 237 SALNLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +++ G    G++    +  +EM+   +  DVVTY  LI+    +G   +A  L+DEM+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P  + Y+ +I G C +N++  AE MF  M   G  PNL T+N L+DGYC    ++  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E  HEM    L  +  T+  L+ G   VG+L AA +    M   G+ P+I   + L+DG
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 269 HCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            C  G L +A+ +   M+K +           + PDV TYNILI GL   G+   AE L 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K   PNVVTF++LI+G CKA
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D  + L+ EM  + +V + + +  LI G  K GN+   L +++EM+ + + P   T+
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 438 SSLIHGLFKNGRISNALNFFLEK 460
            +++ GL+    +  A+   LEK
Sbjct: 655 RNMLTGLWSKEELKRAVA-MLEK 676



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 234/497 (47%), Gaps = 87/497 (17%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            +P V  F+TL+        + EAL ++ ++      P +     L+NGL ++G+     
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPTVVIYTILIHG 163
              + M+  GL    +TYG ++D  C +GD + ALNL  +M +   I P VVIY+ +I  
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC---KVADVNRAL----------- 209
           LC + +  +A+++F  M+E G+ P+L+TYN+++ G+C   + +D  + L           
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 210 ---------------------EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
                                E Y EML   + PN +T+  ++DG CK   L AA + F 
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            MA  G  PN+  +N LIDG+C A  + + M L  EM +  +  D  TYN LI G   VG
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS------------------ 350
            L  A  LLQ+M   G+  ++VT ++L+DG C  G ++ AL                   
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 351 ----------------------------VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
                                       +  +M  +G+ P+ +T+SS+IDG CK   +D 
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  ++  M  KS  P+VV FT LI+G  K G + + L L+ EM    I  +  T  +LI 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 443 GLFKNGRISNALNFFLE 459
           G  K G I+ AL+ F E
Sbjct: 625 GFRKVGNINGALDIFQE 641



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 223/437 (51%), Gaps = 5/437 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++N L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A N F  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C  G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSPN + +  +I   C   +I    +L 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKG----CSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + LL +MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESR 573
           G LK A    + +++S+
Sbjct: 479 GKLKDALEMFKVMQKSK 495



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 204/405 (50%), Gaps = 40/405 (9%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +ML     P+VV F  LM  + ++       + +  M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +I+ +N LI   C    L  A+S   ++ K  + PDV T+  L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M++     NVVT+ +L++G C+EG + +A+++  +M E G++P  +T+ +++DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  +  ++P+VV+++A+ID L KDG   +   L+ EM E  I P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT +S+I G   +GR S+A     E  ++      SP+ V Y A+I A   +G+  +A 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERK----ISPDVVTYNALINAFVKEGKFFEAE 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLR--------------------------------- 520
           +L+ +M    + P+  TY++M+ G  +                                 
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405

Query: 521 --AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             AKR+ D M LL +M + G+V D      ++ G+   GDL +A 
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 14/284 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  +     I++ + +  ++    ++      N L++G    G  ++  +  
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM------ID-----KGIEPTVVI 156
           +EM+  GL  D+VT   L+D  C  G +  AL +F  M      +D      G+EP V  
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y ILI GL NE K +EAE ++  M   G+VP+  TY++++DG CK + ++ A + +  M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVVTF  L++G CK G +      F  M + G+  N   Y  LI G  K GN+ 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            A+ +  EM    + PD  T   ++ GL    +L+ A  +L+K+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + ++TLI  F  +G +  AL + +++    + P I  C+ LL+GL   GK     E +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488

Query: 108 EEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + M              G+  DV TY +LI     +G  ++A  L++EM  +GI P  + 
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I GLC ++++ EA  MF SM      PN+ T+  L++GYCK   V+  LE + EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  N +T+  L+ G  KVG +  A + F  M   GV+P+      ++ G      L 
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 277 EAMSLCSEMEKFEISPDV 294
            A+++   +EK ++S D+
Sbjct: 669 RAVAM---LEKLQMSMDL 683


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/516 (32%), Positives = 288/516 (55%), Gaps = 12/516 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFYE 108
           +F+ +I    + G + EA+ V  K E+L   +  N      L+ G  K+G  DS  E ++
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKV--KGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFD 353

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M   G+  + VTY V+I+ CC  G++ KA  ++++M +K I PTV     LI G     
Sbjct: 354 KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKAR 413

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
              EA  +F     CG+  N++TYN+L+   CK   ++ A   + +M+   ++P+VV++ 
Sbjct: 414 SPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYN 472

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G C+ G++ +A   FV M + G+ PN+  Y+ L+DG+ K G+   A  L   M   
Sbjct: 473 NMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGE 532

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I+P  FT NI+I GLC  G+   ++  L+K+ +EG +   +TYN +IDG+ KEG +  A
Sbjct: 533 NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA 592

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L+V ++M + GV PNV T+++LI+G CK+ N+D A+ +  EM  K +  DV V+ ALIDG
Sbjct: 593 LAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDG 652

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G+M    +L  E+ E  ++P+    SS+I G  K   +  AL+  L K    +G  
Sbjct: 653 FCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH--LHKRMINEGIP 710

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C  +  +Y  +I  L  +G++L AS+L+++M +  + PD  TY+ ++ GL    ++ +  
Sbjct: 711 C--DLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQ 768

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +L DM +  + P   I   ++ G+ + G+L+ AFR
Sbjct: 769 KILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804



 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 158/474 (33%), Positives = 264/474 (55%), Gaps = 10/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    + G++++A  +Y ++   ++ P +   N+L+ G +K    +   + +
Sbjct: 363 NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF 422

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E V CG +A+V TY  L+   C +G + +A +++++M+ KG+ P+VV Y  +I G C +
Sbjct: 423 DEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQ 481

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A  +F  M E G+ PNL TY+ LMDGY K  D   A   Y  M   N+ P+  T 
Sbjct: 482 GDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTC 541

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            ++++GLCK G    + +    + + G  P    YNC+IDG  K G++  A+++ +EM K
Sbjct: 542 NIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCK 601

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +SP+VFTY  LI G C    ++ A  ++ +M  +GI  +V  Y +LIDG+C++GDM  
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + S++ E G+ PN V +SS+I G  K  N++AA+ L+  M+ + +  D+ ++T LI 
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+G +     LY EML   I P + T S LIHGL   G++ NA    LE  D+    
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK-ILEDMDRK--- 777

Query: 468 YC-SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            C +P   +Y  +I     +G + +A +L ++M    L PD+ TY  ++ G ++
Sbjct: 778 -CMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 279/570 (48%), Gaps = 72/570 (12%)

Query: 68  IEEALWVYRKIEVLPAIQAC---NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I EA  VY K+        C   + ++   +++GK +    ++ E    G+  D   Y +
Sbjct: 205 IREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSI 264

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC-NENKMVEAESMFRSMREC 183
           +I+  C + D + AL L  EM DKG  P  VI+T +I G+C  + KM+EA  +   M  C
Sbjct: 265 VIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSC 323

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G   N+     LM GYCK  D++ ALE + +M  + + PN VT+ V+++  CK G +  A
Sbjct: 324 GKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKA 383

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              +  M    + P +F  N LI G+ KA +  EA  L  E     I+ +VFTYN L+  
Sbjct: 384 YEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSW 442

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G++  A  + +KM ++G+  +VV+YN++I G+C++GDM+ A  V  +M EKG++PN
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEM--------------------------------- 390
           ++T+S L+DG  K G+ + A GLY  M                                 
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562

Query: 391 --VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
             V +  +P  + +  +IDG  K+G++   L +Y EM +  ++P+VFT ++LI+G  K+ 
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622

Query: 449 RISNALNFFLEKTDK-----------TDGGYC--------------------SPNHVLYA 477
            +  AL    E  +K              G+C                    SPN V+Y+
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           ++I        +  A  L   M ++ +  D   YTT++ GLL+  ++L    L A+M+  
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           GI+PD +   V++ G    G L++A +  E
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILE 772



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 267/521 (51%), Gaps = 8/521 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+ L+ ++ +   I +A+  +  +   +++P +   N  L+ L+K        + Y +M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D  T  V+I     +G + +A   F E  +KG+E     Y+I+I  +C +   
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V A  + R MR+ G VP+   +  ++    K   +  A++   EML      NVV    L
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M G CK G+L +A   F  M + G+ PN   Y  +I+  CK GN+ +A  + ++M+  +I
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP VF  N LI+G       E A  L  +    GI ANV TYNSL+   CKEG M +A S
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACS 454

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KGV P+VV+++++I G C+ G++D+A G++ EM+ K L P+++ ++ L+DG  
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G+ +    LY  M    I PS FT + +I+GL K GR S + +   +   +   G+  
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQE---GFI- 570

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P  + Y  II     +G +  A  ++++M    + P+  TYT ++ G  ++  M   + +
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + +M   GI  D  +   ++ G+   GD+ +A +    L+E
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 227/428 (53%), Gaps = 6/428 (1%)

Query: 26  LKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLP 82
           LK+R P      +F+   +  I   N   +++L+    + G + EA  ++ K+    V P
Sbjct: 410 LKARSPEEAS-KLFDEAVACGIA--NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP 466

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           ++ + N ++ G  ++G  DS    + EM+  GL  +++TY VL+D    +GD   A  L+
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M  + I P+     I+I+GLC   +  E++   + + + G +P   TYN ++DG+ K 
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             VN AL  Y EM    + PNV T+  L++G CK   +  A      M   G+  ++ VY
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             LIDG C+ G++  A  L SE+++  +SP+   Y+ +I G   +  +E A  L ++M  
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           EGI  ++  Y +LI G  KEG +  A  + ++M  KG+ P+++T+S LI G C  G ++ 
Sbjct: 707 EGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLEN 766

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  +  +M  K + P V ++  LI G  K+GN++E  RL+ EML+  + P   T   L++
Sbjct: 767 AQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826

Query: 443 GLFKNGRI 450
           G  K+G +
Sbjct: 827 GKVKDGNL 834



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 211/445 (47%), Gaps = 26/445 (5%)

Query: 137 KALNLFDEMI--DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           KA NL +     D G  P+VV+  ++       ++ ++ ES  R             +N 
Sbjct: 117 KARNLLNRFASDDWGPVPSVVVARLI-----ESSRRLDFESDSR------------VFNY 159

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++ Y K   +N A++ ++ ++  ++ P +    + +  L K   +R A + +  MA  G
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V  +    + +I    + G L EA     E +   +  D   Y+I+I+ +C       A 
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           GLL++M  +G + + V +  +I    K+G M +A+ V  +M   G   NVV  ++L+ G 
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G++D+A+ L+ +M    + P+ V +  +I+   K+GNM +   +Y +M    I+P+V
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL-YAAIIQALCYDGQILKAS 493
           F V+SLI G  K      A   F E         C   +V  Y +++  LC +G++ +A 
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAV------ACGIANVFTYNSLLSWLCKEGKMSEAC 453

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            ++  M    +RP   +Y  M+ G  +   M     +  +M++ G+ P+ +   V++ GY
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 554 QENGDLKSAFRCSEFLKESRIGSSE 578
            + GD + AF   + ++   I  S+
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSD 538



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 38/265 (14%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I  F + G +  AL VY    KI V P +     L+NG  K    D   +  +EM
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM 634

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV--------------- 155
              G+  DV  Y  LID  C +GD++ A  L  E+ + G+ P  V               
Sbjct: 635 KNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNM 694

Query: 156 --------------------IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                               IYT LI GL  E K++ A  ++  M   G++P+L TY+ L
Sbjct: 695 EAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVL 754

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G C    +  A +   +M    + P V  +  L+ G  K G L+ A      M   G+
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMS 280
            P+   Y+ L++G  K GNLF   S
Sbjct: 815 VPDDTTYDILVNGKVKDGNLFSGAS 839


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 277/553 (50%), Gaps = 24/553 (4%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F  +  L +   +P V  F+TL+        + EAL  + ++      P +     L+
Sbjct: 135 STFGKITKLGL---HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLM 191

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGI 150
           NGL ++G+        + M+  GL    +TYG ++D  C +GD + ALNL  +M +   I
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P VVIY+ +I  LC + +  +A+++F  M+E G+ P+L+TYN+++ G+C     + A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EML   + P+VVT+  L++   K G+   A   +  M   G+ PN   YN +IDG C
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K   L  A  +   M     SPDVFT+  LI G CG  +++    LL +M + G++AN V
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+LI G+C  GD+  AL +  QM   GV P++VT ++L+DG C  G +  A+ ++  M
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491

Query: 391 -----------VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
                          + PDV+ +  LI GL  +G   E   LY+EM    I P   T SS
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL K  R+  A   F+    K+     SPN V +  +I   C  G++    +LF +M
Sbjct: 552 MIDGLCKQSRLDEATQMFVSMGSKS----FSPNVVTFNTLINGYCKAGRVDDGLELFCEM 607

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               +  D   Y T++ G  +   +   + +  +MI  G+ PD +  + M+ G+    +L
Sbjct: 608 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEEL 667

Query: 560 KSAFRCSEFLKES 572
           + A    E L+ S
Sbjct: 668 ERAVAMLEDLQMS 680



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/545 (30%), Positives = 277/545 (50%), Gaps = 50/545 (9%)

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F E+  +E+A+ ++  +     LP++     L+  +++  + D V   Y++M    +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+ ++ +LI C C    +  AL+ F ++   G+ P VV +T L+HGLC E+++ EA   F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M E    PN+ T+  LM+G C+   +  A+     M+   LQP  +T+G ++DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 238 GELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           G+  +A N    M +   + PN+ +Y+ +ID  CK G   +A +L +EM++  I PD+FT
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 297 YNILIKGLCGVGQLEGAEGLLQKM-------------------------------YKE-- 323
           YN +I G C  G+   AE LLQ+M                               Y E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 324 --GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI+ N +TYNS+IDG+CK+  ++ A  +   M  KG  P+V TF++LIDG C A  ID
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             M L  EM  + LV + V +  LI G    G++   L L ++M+ + + P + T ++L+
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 442 HGLFKNGRISNALNFF---------LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            GL  NG++ +AL  F         L+ +   +G    P+ + Y  +I  L  +G+ L+A
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG--VEPDVLTYNILICGLINEGKFLEA 530

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +L+ +M    + PD  TY++M+ GL +  R+ +   +   M      P+ V    ++ G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 590

Query: 553 YQENG 557
           Y + G
Sbjct: 591 YCKAG 595



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 5/438 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++N L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A +FF  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C  G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S+I G  K  R+  A + F     K     CSP+   +  +I   C   +I    +L 
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKG----CSPDVFTFTTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +  TY T++ G      +   + L   MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 479 GKLKDALEMFKAMQKSKM 496



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 5/404 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  M     +P++  +  LM    ++   +  +  Y +M    ++ ++ +F +L+
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILI 121

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C   +L  A + F  + K G+ P++  +  L+ G C    + EA+    +M +    
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V T+  L+ GLC  G++  A  LL +M ++G+    +TY +++DG CK+GD   AL++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 352 CSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             +M E   + PNVV +S++ID  CK G    A  L+TEM  K + PD+  + ++I G  
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G   +  +L +EMLE KI+P V T ++LI+   K G+   A   + E   +       
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG----II 357

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y ++I   C   ++  A  +F  M +    PD  T+TT++ G   AKR+ D M L
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           L +M + G+V + V    ++ G+   GDL +A   S+ +  S +
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 167/513 (32%), Positives = 271/513 (52%), Gaps = 8/513 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +  S+L+      G + +A  +    +K+  +P++   NAL+N L K GKFD     ++E
Sbjct: 332 AALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKE 391

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL A+ VTY +LID  C +G +  A++   +MI  GI+ TV  Y  LI+G C    
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGN 451

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A S F  M + G+ P + +Y +L+ GYC    ++ A   YHEM    + PN  TF  
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  L +   +  A   F  M +  + PN   YN +I+GHCK GN  +A  L ++M +  
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD +TY  LI  LC  G++  A+  +  +++E    N + Y++L+ GYCKEG +  AL
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            VC +M ++GV+ ++V ++ LIDG  K  +  A  GL   M  + L PD V++T++IDG 
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGY 691

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           SK G++K+   ++  M++   TP++ T ++LI+ L K G +  A   + E          
Sbjct: 692 SKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS---- 747

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           +PNHV Y   +  L  +G + KA +L +DM    L  +  +Y  ++RG  +  R+ +   
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATK 806

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           LL +MI   I PD +    ++      G+L  A
Sbjct: 807 LLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGA 839



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 173/593 (29%), Positives = 276/593 (46%), Gaps = 13/593 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           IF ++   +L    R L  +V   L K R+   V   +F  + S+ I + +  ++  +I 
Sbjct: 180 IFRLMRQCELMPQVRTL-GEVLNGLAKIRRVDMV-LVLFGEILSMGI-RPDIYIYVAVIR 236

Query: 61  AFSEMGHIEEALWVYRKIEVLPA-IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           +F E+ +  +A  + +++E     +   N L++GL K  +     E    ++  GL A  
Sbjct: 237 SFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASE 296

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           VTY  L+   C   +      + DEMI+ G  PT    + L+ GL  + K+V+A  +   
Sbjct: 297 VTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNR 356

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +++ G +P+L+ YNAL++  CK    + A   + EM    L  N VT+ +L+D  C+ G+
Sbjct: 357 VKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGK 416

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A +F   M   G+   ++ YN LI+GHCK GNL  A+S   EM    + P V +Y  
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTS 476

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G+L  A  L  +M  +GI  N  T+ +LI    +   M  A  +  +M E+ 
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + PN VT++ +I+G CK GN   A  L  +MV K LVPD   +  LI  L   G + E  
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           +   ++       +    S+L+HG  K GR+ +AL    E   +        + V YA +
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG----VDMDLVCYAVL 652

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I     +        L  +M    LRPD   YT+M+ G  +A  +     +   MI  G 
Sbjct: 653 IDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC 712

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTR-SFLGHL 591
            P+ V    ++    + G +  A    E L +  + S+ T  H T   FL HL
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKA----ELLWKEMLVSNSTPNHVTYCCFLDHL 761



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 245/521 (47%), Gaps = 42/521 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT---YGVLIDCCCGQGDVMKALNLFDE 144
           ++LL  L+ +G  D   E +E ++ C    D ++   + +LI     +  +  ++ +F  
Sbjct: 125 SSLLQTLLLRGGLDP-REVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRL 183

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY-------------- 190
           M    + P V     +++GL    ++     +F  +   G+ P++Y              
Sbjct: 184 MRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKN 243

Query: 191 -------------------TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
                               YN L+ G CK   V  A+E  + ++   L  + VT+  L+
Sbjct: 244 FAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLV 303

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLCKV E          M + G  P     + L++G  + G + +A  L + ++K    
Sbjct: 304 LGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAM 363

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P +F YN LI  LC  G+ + AE L ++M ++G+ AN VTY+ LID +C+ G ++ A+  
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHF 423

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M   G++  V  ++SLI+G CK GN+ AA+  + EM+ K L P VV +T+LI G   
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E  RLY EM    I P+ +T ++LI  LF+  R+++A   F E  ++       P
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN----MMP 539

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y  +I+  C +G  +KA +L + M    L PD  TY  ++  L    R+ +    +
Sbjct: 540 NEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
            D+ +     + +    ++ GY + G L+ A   C E +K 
Sbjct: 600 DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKR 640



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 211/442 (47%), Gaps = 39/442 (8%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
             P+V  +++LI  +   G + EA  +Y ++    + P       L++ L +  +    +
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             ++EM+   ++ + VTY V+I+  C +G+ +KA  L ++M+ KG+ P    Y  LI  L
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  ++ EA+     +       N   Y+AL+ GYCK   +  AL    EM+   +  ++
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V + VL+DG  K  +  A      +M    + P+  +Y  +IDG+ KAG++ +A  +   
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK---------------------- 322
           M     +P++ TY  LI  LC  G ++ AE L ++M                        
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766

Query: 323 ------------EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                       +G+LAN V+YN L+ G+CK G +E+A  +  +M +  + P+ +T+S++
Sbjct: 767 MEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTI 826

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   C+ GN+D A+  +  M+ K L PD + +  LI G    G + +   L  +M+   +
Sbjct: 827 IYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886

Query: 431 TPSVFTVSSLIHGLFKNGRISN 452
            P+  T  SL HG  +   IS 
Sbjct: 887 KPNQATHKSLSHGASRKFSIST 908


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 173/519 (33%), Positives = 268/519 (51%), Gaps = 13/519 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F  L+     M   +  + +Y+K+E   +   I +   L+       K       
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + ++   GL  DVVT+  L+   C +  V +ALNLF +M +    P VV +T L++GLC 
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVV 225
           E ++VEA ++   M E G+ P   TY  ++DG CK  D   AL    +M    ++ PNVV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D LCK G    A N F  M + G+FP++F YN +I G C +G   +A  L  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +ISPDV TYN LI      G+   AE L  +M   GI+ N +TY+S+IDG+CK+  +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +   M  KG  PN++TF++LIDG C A  ID  M L  EM    LV D   +  L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK 463
           I G    G++   L L +EM+ + + P + T  +L+ GL  NG++ +AL  F  ++K+ K
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 464 T-DGGY----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             D  +      P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M+ GL
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 237/443 (53%), Gaps = 22/443 (4%)

Query: 37  SVFNALNSLE-----IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACN 88
           S  N L  +E     IP  N  ++S +I +  + G   +A  ++ +++   + P +   N
Sbjct: 237 SALNLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +++ G    G++    +  +EM+   +  DVVTY  LI+    +G   +A  L+DEM+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P  + Y+ +I G C +N++  AE MF  M   G  PNL T+N L+DGYC    ++  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E  HEM    L  +  T+  L+ G   VG+L AA +    M   G+ P+I   + L+DG
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 269 HCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            C  G L +A+ +   M+K +           + PDV TYNILI GL   G+   AE L 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K   PNVVTF++LI+G CKA
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D  + L+ EM  + +V + + +  LI G  K GN+   L +++EM+ + + P   T+
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 438 SSLIHGLFKNGRISNALNFFLEK 460
            +++ GL+    +  A+   LEK
Sbjct: 655 RNMLTGLWSKEELKRAVA-MLEK 676



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 239/510 (46%), Gaps = 90/510 (17%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F  L  L +   +P V  F+TL+        + EAL ++ ++      P +     L+
Sbjct: 135 STFGKLTKLGL---HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 191

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGI 150
           NGL ++G+        + M+  GL    +TYG ++D  C +GD + ALNL  +M +   I
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC---KVADVNR 207
            P VVIY+ +I  LC + +  +A+++F  M+E G+ P+L+TYN+++ G+C   + +D  +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 208 AL--------------------------------EFYHEMLHHNLQPNVVTFGVLMDGLC 235
            L                                E Y EML   + PN +T+  ++DG C
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K   L AA + F  MA  G  PN+  +N LIDG+C A  + + M L  EM +  +  D  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS----- 350
           TYN LI G   VG L  A  LLQ+M   G+  ++VT ++L+DG C  G ++ AL      
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 351 -----------------------------------------VCSQMTEKGVEPNVVTFSS 369
                                                    +  +M  +G+ P+ +T+SS
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +IDG CK   +D A  ++  M  KS  P+VV FT LI+G  K G + + L L+ EM    
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           I  +  T  +LI G  K G I+ AL+ F E
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQE 641



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 222/437 (50%), Gaps = 5/437 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++  L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A N F  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C  G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSPN + +  +I   C   +I    +L 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKG----CSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + LL +MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESR 573
           G LK A    + +++S+
Sbjct: 479 GKLKDALEMFKVMQKSK 495



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 204/405 (50%), Gaps = 40/405 (9%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +ML     P+VV F  LM  + ++       + +  M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +I+ +  LI   C    L  A+S   ++ K  + PDV T+N L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M++     NVVT+ +L++G C+EG + +A+++  +M E G++P  +T+ +++DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  +  ++P+VV+++A+ID L KDG   +   L+ EM E  I P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT +S+I G   +GR S+A     E  ++      SP+ V Y A+I A   +G+  +A 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERK----ISPDVVTYNALINAFVKEGKFFEAE 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLR--------------------------------- 520
           +L+ +M    + P+  TY++M+ G  +                                 
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405

Query: 521 --AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             AKR+ D M LL +M + G+V D      ++ G+   GDL +A 
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 14/284 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  +     I++ + +  ++    ++      N L++G    G  ++  +  
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-----------GIEPTVVI 156
           +EM+  GL  D+VT   L+D  C  G +  AL +F  M              G+EP V  
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y ILI GL NE K +EAE ++  M   G+VP+  TY++++DG CK + ++ A + +  M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVVTF  L++G CK G +      F  M + G+  N   Y  LI G  K GN+ 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            A+ +  EM    + PD  T   ++ GL    +L+ A  +L+K+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + ++TLI  F  +G +  AL + +++    + P I  C+ LL+GL   GK     E +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488

Query: 108 EEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + M              G+  DV TY +LI     +G  ++A  L++EM  +GI P  + 
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I GLC ++++ EA  MF SM      PN+ T+  L++GYCK   V+  LE + EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  N +T+  L+ G  KVG +  A + F  M   GV+P+      ++ G      L 
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 277 EAMSLCSEMEKFEISPDV 294
            A+++   +EK ++S D+
Sbjct: 669 RAVAM---LEKLQMSMDL 683


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 173/519 (33%), Positives = 268/519 (51%), Gaps = 13/519 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F  L+     M   +  + +Y+K+E   +   I +   L+       K       
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + ++   GL  DVVT+  L+   C +  V +ALNLF +M +    P VV +T L++GLC 
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVV 225
           E ++VEA ++   M E G+ P   TY  ++DG CK  D   AL    +M    ++ PNVV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D LCK G    A N F  M + G+FP++F YN +I G C +G   +A  L  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +ISPDV TYN LI      G+   AE L  +M   GI+ N +TY+S+IDG+CK+  +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +   M  KG  PN++TF++LIDG C A  ID  M L  EM    LV D   +  L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK 463
           I G    G++   L L +EM+ + + P + T  +L+ GL  NG++ +AL  F  ++K+ K
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 464 T-DGGY----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             D  +      P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M+ GL
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 237/443 (53%), Gaps = 22/443 (4%)

Query: 37  SVFNALNSLE-----IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACN 88
           S  N L  +E     IP  N  ++S +I +  + G   +A  ++ +++   + P +   N
Sbjct: 237 SALNLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +++ G    G++    +  +EM+   +  DVVTY  LI+    +G   +A  L+DEM+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P  + Y+ +I G C +N++  AE MF  M   G  PNL T+N L+DGYC    ++  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E  HEM    L  +  T+  L+ G   VG+L AA +    M   G+ P+I   + L+DG
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 269 HCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            C  G L +A+ +   M+K +           + PDV TYNILI GL   G+   AE L 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K   PNVVTF++LI+G CKA
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D  + L+ EM  + +V + + +  LI G  K GN+   L +++EM+ + + P   T+
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 438 SSLIHGLFKNGRISNALNFFLEK 460
            +++ GL+    +  A+   LEK
Sbjct: 655 RNMLTGLWSKEELKRAVA-MLEK 676



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 220/459 (47%), Gaps = 50/459 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TL+      G I EA+ +  ++    + P       +++G+ KKG   S     
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 108 EEMV-LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +M  +  ++ +VV Y  +ID  C  G    A NLF EM +KGI P +  Y  +I G C+
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +  +AE + + M E  + P++ TYNAL++ + K      A E Y EML   + PN +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++DG CK   L AA + F  MA  G  PN+  +N LIDG+C A  + + M L  EM 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +  D  TYN LI G   VG L  A  LLQ+M   G+  ++VT ++L+DG C  G ++
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 347 KALS----------------------------------------------VCSQMTEKGV 360
            AL                                               +  +M  +G+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ +T+SS+IDG CK   +D A  ++  M  KS  P+VV FT LI+G  K G + + L 
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           L+ EM    I  +  T  +LI G  K G I+ AL+ F E
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 222/437 (50%), Gaps = 5/437 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++  L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A N F  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C  G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSPN + +  +I   C   +I    +L 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKG----CSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + LL +MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESR 573
           G LK A    + +++S+
Sbjct: 479 GKLKDALEMFKVMQKSK 495



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 204/405 (50%), Gaps = 40/405 (9%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +ML     P+VV F  LM  + ++       + +  M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +I+ +  LI   C    L  A+S   ++ K  + PDV T+N L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M++     NVVT+ +L++G C+EG + +A+++  +M E G++P  +T+ +++DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  +  ++P+VV+++A+ID L KDG   +   L+ EM E  I P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT +S+I G   +GR S+A     E  ++      SP+ V Y A+I A   +G+  +A 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERK----ISPDVVTYNALINAFVKEGKFFEAE 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLR--------------------------------- 520
           +L+ +M    + P+  TY++M+ G  +                                 
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405

Query: 521 --AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             AKR+ D M LL +M + G+V D      ++ G+   GDL +A 
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 14/284 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  +     I++ + +  ++    ++      N L++G    G  ++  +  
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM------ID-----KGIEPTVVI 156
           +EM+  GL  D+VT   L+D  C  G +  AL +F  M      +D      G+EP V  
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y ILI GL NE K +EAE ++  M   G+VP+  TY++++DG CK + ++ A + +  M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVVTF  L++G CK G +      F  M + G+  N   Y  LI G  K GN+ 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            A+ +  EM    + PD  T   ++ GL    +L+ A  +L+K+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + ++TLI  F  +G +  AL + +++    + P I  C+ LL+GL   GK     E +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488

Query: 108 EEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + M              G+  DV TY +LI     +G  ++A  L++EM  +GI P  + 
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I GLC ++++ EA  MF SM      PN+ T+  L++GYCK   V+  LE + EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  N +T+  L+ G  KVG +  A + F  M   GV+P+      ++ G      L 
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 277 EAMSLCSEMEKFEISPDV 294
            A+++   +EK ++S D+
Sbjct: 669 RAVAM---LEKLQMSMDL 683


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 169/503 (33%), Positives = 266/503 (52%), Gaps = 17/503 (3%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ ++ +    G    AL ++R    +  V P I   N ++NGL K     +  E +EE+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVVTY  LID  C  GD+ +A  L  +M  +G  P VV Y++LI+GLC   ++
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 171 VEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ--PNVVT 226
            EA  + + M  + C V+PN+ TYN+ +DG CK +    A E    +   +L+  P+ VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DGLCK G++  A + F  M   G  PN+  YN L++G CKA  +  A ++   M 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV-----VTYNSLIDGYCK 341
              ++PDV TY++L+   C   +++ A  LL  M   G   NV     VT+N LI G CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G+ E+A ++  +M  K ++P+V+TF +LIDG CKAG ++AA  +   M    + P+VV 
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + AL+ GL K G ++E  +  +EM+ +   P   T  SL++ L +  R  +AL    E  
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL- 422

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K+ G    P+ V Y  ++  L   G+  +A  +  +M     +PD+ T+     GL R+
Sbjct: 423 -KSFGW--DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479

Query: 522 KRMLDVMMLLADMIKMGIVPDAV 544
             +   M LL  ++  G++PDA 
Sbjct: 480 GNLAGTMELLRVVLAKGMLPDAT 502



 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 167/479 (34%), Positives = 247/479 (51%), Gaps = 22/479 (4%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLF-DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           V  Y +++   C  GD  +AL +F  EM   G+ PT+V Y  +I+GLC  N +     +F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             + E G  P++ TYN L+D  CK  D+  A   + +M      PNVVT+ VL++GLCKV
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 238 GELRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME--KFEISPD 293
           G +  A      M +    V PNI  YN  +DG CK     EA  L   +      +SPD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T++ LI GLC  GQ++ A  +   M   G + NV+TYN+L++G CK   ME+A ++  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS-----LVPDVVVFTALIDG 408
            M +KGV P+V+T+S L+D  CKA  +D A+ L   M  +      LVPD V F  LI G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K GN ++   L++EM+   + P V T  +LI GL K G++  A +      D      
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL----DLMGNLG 356

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN V Y A++  LC  G+I +A +   +M S    PD+ TY +++  L RA R  D +
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
            L++++   G  PD V   ++V G  ++G  + A      + E  +G    +GH   SF
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT----VLEEMVG----KGHQPDSF 467



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 162/482 (33%), Positives = 252/482 (52%), Gaps = 14/482 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYE-EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           N +L  L + G      E +  EM   G+   +VTY  +I+  C   D+   + LF+E++
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           ++G  P VV Y  LI  LC    + EA  +   M   G VPN+ TY+ L++G CKV  ++
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 207 RALEFYHEMLHH--NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--AKFGVFPNIFVY 262
            A E   EM     ++ PN++T+   +DGLCK      A      +      V P+   +
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + LIDG CK G + EA S+  +M      P+V TYN L+ GLC   ++E A  +++ M  
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV-----VTFSSLIDGQCKA 377
           +G+  +V+TY+ L+D +CK   +++AL +   M  +G  PNV     VTF+ LI G CKA
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           GN + A  L+ EMV K+L PDV+ F ALIDGL K G ++    +   M    + P+V T 
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++L+HGL K+GRI  A  F  E         C P+ + Y +++ ALC   +   A +L S
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSG----CVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +++S    PD  TY  ++ GL ++ +    + +L +M+  G  PD+        G   +G
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 558 DL 559
           +L
Sbjct: 481 NL 482



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/451 (32%), Positives = 229/451 (50%), Gaps = 22/451 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI +  + G +EEA  ++  +     +P +   + L+NGL K G+ D   E  +EM
Sbjct: 74  TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133

Query: 111 VL--CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--IEPTVVIYTILIHGLCN 166
               C ++ +++TY   +D  C Q    +A  L   + D    + P  V ++ LI GLC 
Sbjct: 134 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 193

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA S+F  M   G VPN+ TYNAL++G CK   + RA      M+   + P+V+T
Sbjct: 194 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 253

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV-----YNCLIDGHCKAGNLFEAMSL 281
           + VL+D  CK   +  A      MA  G  PN+ V     +N LI G CKAGN  +A +L
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    + PDV T+  LI GLC  GQ+E A  +L  M   G+  NVVTYN+L+ G CK
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A     +M   G  P+ +T+ SL+   C+A   D A+ L +E+      PD V 
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---L 458
           +  L+DGL K G  ++ + + +EM+     P  FT ++   GL ++G ++  +      L
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            K    D   CS       +I+  +C  G++
Sbjct: 494 AKGMLPDATTCS-------SILDWVCRSGKL 517



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 218/414 (52%), Gaps = 12/414 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   +S LI    ++G I+EA  + +++     +VLP I   N+ L+GL K+       E
Sbjct: 106 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 165

Query: 106 FYEEMVLCGL--VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               +    L    D VT+  LID  C  G + +A ++FD+MI  G  P V+ Y  L++G
Sbjct: 166 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 225

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC  +KM  A +M  SM + GV P++ TY+ L+D +CK + V+ ALE  H M      PN
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285

Query: 224 V-----VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           V     VTF +L+ G CK G    A   F  M    + P++  +  LIDG CKAG +  A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   M    + P+V TYN L+ GLC  G++E A   L++M   G + + +TY SL+  
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C+    + AL + S++   G +P+ VT++ L+DG  K+G  + A+ +  EMV K   PD
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
              F A   GL + GN+  T+ L + +L   + P   T SS++  + ++G++ +
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 171/344 (49%), Gaps = 8/344 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            FSTLI    + G I+EA  V+  +     +P +   NAL+NGL K  K +      E M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV-----VIYTILIHGLC 165
           V  G+  DV+TY VL+D  C    V +AL L   M  +G  P V     V + ILI G C
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 +A ++F  M    + P++ T+ AL+DG CK   V  A +    M +  + PNVV
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ GLCK G +  A  F   M   G  P+   Y  L+   C+A    +A+ L SE+
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           + F   PD  TYNIL+ GL   G+ E A  +L++M  +G   +  T+ +   G  + G++
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
              + +   +  KG+ P+  T SS++D  C++G +D    +  E
Sbjct: 483 AGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 172/491 (35%), Positives = 268/491 (54%), Gaps = 16/491 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVW 104
           ++P V  ++TL+  F ++G ++EAL ++    K   +P +   NAL+NG  K  K D   
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 175

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              + MV   LV DVVTY  L++  C  G V +A  L   ++DKG  P V+ Y+ LI GL
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGL 232

Query: 165 CNENKMVE-AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           C E + +E A  +   M   G  P++ +YNAL+ G  +   V+ AL+ +  +L    +P 
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE 292

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+ +L+DGL K   +  A   F  + K G+ P+   Y   IDG CKAG + +A+ +  
Sbjct: 293 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M++    PDV ++N +I GLC   +++ AE LL  M  +G   N +++N+LI G C+ G
Sbjct: 353 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA---GNIDAAMGLYTEMVIKSLVPDVV 400
             +KA++   +M ++GV+P VVT++ L+DG CKA   G I  A+ L+  M+ K  VPDVV
Sbjct: 413 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            ++ALIDGL K G + +  RL   M      P+V+T +SLI GL    ++  AL  F+  
Sbjct: 473 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAM 532

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +K     C P+ + Y  II ALC    + KA  LF       + P +  Y +++ GL  
Sbjct: 533 VEKG----CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCA 588

Query: 521 AKRMLDVMMLL 531
             R+ + + LL
Sbjct: 589 VARVDEALKLL 599



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/487 (32%), Positives = 252/487 (51%), Gaps = 12/487 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P       LL  L+K GK +    F E++++ GL  D+ T+ + I   C    +  A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           FD M   G  P  + Y  L+ GLCN  +M +A++++  M + G  P++ TYN L+ G+CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  ++ AL+ +   +     P+VVT+  L++G CK  +L  A      M    + P++  
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG-VGQLEGAEGLLQKM 320
           YN L++G CK G + EA  L  +      SP+V TY+ LI GLC  + +LE A  LL+KM
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   ++V+YN+LI G  +E  + +AL +   +  +G EP V T++ LIDG  K   +
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  L++ +V   L PD + +T  IDGL K G +++ L + K+M E    P V + +++
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+GL K  R+  A         K     CSPN + +  +I   C  G+  KA   F +M 
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKG----CSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 501 SDNLRPDNCTYTTMLRGLLRAK---RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              ++P   TY  ++ GL +A+   R+ + + L   MI+ G VPD V    ++ G  + G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485

Query: 558 DLKSAFR 564
            L  A R
Sbjct: 486 KLDDARR 492



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 171/533 (32%), Positives = 261/533 (48%), Gaps = 53/533 (9%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S F+  I        I +A  V+   RK    P     NALL+GL   G+       YE 
Sbjct: 51  STFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYER 110

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G   DVVTY  L+   C  G + +AL +FD  + +G  P VV Y  LI+G C  +K
Sbjct: 111 MIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 170

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA+ + + M    +VP++ TYN+L++G CK   V+ A      ++     PNV+T+  
Sbjct: 171 LDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYST 227

Query: 230 LMDGLCKVGELR--------------------------------------AAGNFFVHMA 251
           L+ GLC+  ELR                                       A   F  + 
Sbjct: 228 LISGLCR--ELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G  P +  YN LIDG  K   + EA  L S + K  + PD  TY + I GLC  G++E
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +L+ M ++G + +VV++N++I+G CKE  +++A  + S M  KG  PN ++F++LI
Sbjct: 346 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK---DGNMKETLRLYKEMLEA 428
            GQC+AG    AM  + EM+ + + P VV +  L+DGL K   +G +KE + L+  M+E 
Sbjct: 406 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 465

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
              P V T S+LI GL K G++ +A         K     C PN   Y ++I  LC   +
Sbjct: 466 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG----CIPNVYTYNSLISGLCGLDK 521

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           + +A +LF  M      PD  TY T++  L + + +   + L    ++ G+VP
Sbjct: 522 VDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 216/425 (50%), Gaps = 10/425 (2%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            ++D+++ +   P      IL+  L    K+ +A      +   G+  ++ T+N  + G 
Sbjct: 3   TVYDKLV-RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGL 60

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+ + +  A   +  M  H   PN +T+  L+ GLC  G +  A   +  M K G  P++
Sbjct: 61  CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN L+ G CK G L EA+ +     K    PDV TYN LI G C   +L+ A+ +LQ+
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA-G 378
           M  E ++ +VVTYNSL++G CK G +++A  +   + +KG  PNV+T+S+LI G C+   
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 237

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +++A  L  +MV+    PD+V + ALI GL+++  + E L+L+  +L     P V T +
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI GL K  R++ A   F   +     G   P+ + Y   I  LC  G++  A  +  D
Sbjct: 298 ILIDGLLKEDRVNEAFELF---SGLVKHGL-EPDAITYTVFIDGLCKAGRVEDALLMLKD 353

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M      PD  ++  ++ GL + KR+ +  +LL+ M   G  P+A+    ++ G    G 
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413

Query: 559 LKSAF 563
            K A 
Sbjct: 414 WKKAM 418



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 12/304 (3%)

Query: 23  ENLLKSRKPHHVCYSVFNAL--NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE- 79
           + LLK  + +   + +F+ L  + LE      +VF   I    + G +E+AL + + ++ 
Sbjct: 301 DGLLKEDRVNEA-FELFSGLVKHGLEPDAITYTVF---IDGLCKAGRVEDALLMLKDMDE 356

Query: 80  --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
              +P + + NA++NGL K+ + D        M   G   + +++  LI   C  G   K
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLC---NENKMVEAESMFRSMRECGVVPNLYTYNA 194
           A+  F EM+ +G++PTVV Y IL+ GLC    E ++ EA ++F +M E G VP++ TY+A
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+DG  K   ++ A      M      PNV T+  L+ GLC + ++  A   FV M + G
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P+   Y  +I   CK   + +A++L     +  + P    Y  LI GLC V +++ A 
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596

Query: 315 GLLQ 318
            LLQ
Sbjct: 597 KLLQ 600


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 275/513 (53%), Gaps = 9/513 (1%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVLPAIQ----ACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++L+    ++  +E A  V+R++ V   I+      N ++N L K GKFD V  F  EM 
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREV-VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME 145

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+ AD+VTY  LI   C +G + +A  + + M DKG++P++  Y  +I+GLC + +  
Sbjct: 146 GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A+ +   M   G+ P+  TYN L+   C+  + + A E + EML   + P++V+F  L+
Sbjct: 206 RAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
               +   L  A  +F  M KFG+ P+  +Y  L+ G+C+ GN+ EA+ +  EM +    
Sbjct: 266 AVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV 325

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV  YN ++ GLC    L  A+ L  +M + G L +  T+ +LI G+C++G+M KALS+
Sbjct: 326 LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL 385

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              MT++ ++P++V +++LIDG CK G ++ A  L+  M+ + + P+ + +  LI+    
Sbjct: 386 FGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCS 445

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G++ E  RL+  M+E  I P++ T +++I G  ++G  S A  F      K      +P
Sbjct: 446 VGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG----VAP 501

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +H+ Y  +I     +  + KA    + M  + L PD  TY  ++ G  R  RM +  ++L
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             MI+ GI PD      ++ G+    +L  AFR
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFR 594



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 232/458 (50%), Gaps = 7/458 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +   +    + P++   NA++NGL KKG++        EM
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  D  TY  L+   C + +  +A  +F EM+ +G+ P +V ++ LI        +
Sbjct: 215 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL 274

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   FR M++ G+VP+   Y  LM GYC+  ++  AL+   EML      +V+ +  +
Sbjct: 275 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK   L  A   F  M + G  P+ + +  LI GHC+ GN+ +A+SL   M +  I
Sbjct: 335 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 394

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+  YN LI G C VG++E A  L   M    I  N +TY  LI+ YC  G + +A  
Sbjct: 395 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 454

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M EKG++P +VT +++I G C++G+   A      M+ K + PD + +  LI+G  
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV 514

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++ NM +      +M +  + P + T + +++G  + GR+  A     +  +K      +
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG----IN 570

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           P+   Y A+I        + +A +   +M      PD+
Sbjct: 571 PDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 197/349 (56%), Gaps = 3/349 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+LI  FS   H+++AL  +R   K  ++P       L++G  + G      +  +EM+
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G V DV+ Y  +++  C +  +  A  LFDEM+++G  P    +T LIHG C +  M 
Sbjct: 321 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 380

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S+F +M +  + P++  YN L+DG+CKV ++ +A E +  M+   + PN +T+G+L+
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C VG +  A   +  M + G+ P +   N +I G+C++G+  +A      M    ++
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  +YN LI G      ++ A   + KM KEG+L +++TYN +++G+C++G M++A  V
Sbjct: 501 PDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELV 560

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             +M EKG+ P+  T+++LI+G     N++ A   + EM+ +   PD V
Sbjct: 561 LRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 214/420 (50%), Gaps = 4/420 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +LI       K+ E    FR +R  G + ++   N+L+ G  K+  V  A E + E
Sbjct: 49  LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   ++ NV T  ++++ LCK G+     +F   M   G++ ++  YN LI  +C+ G 
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA  + + M    + P +FTYN +I GLC  G+   A+G+L +M   G+  +  TYN+
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  +  +A  +  +M  +GV P++V+FSSLI    +  ++D A+  + +M    
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           LVPD V++T L+ G  ++GNM E L++  EMLE      V   +++++GL K   +++A 
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E  ++       P+   +  +I   C DG + KA  LF  M   N++PD   Y T+
Sbjct: 349 KLFDEMVERG----ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 404

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + G  +   M     L   MI   I P+ +   +++  Y   G +  AFR  + + E  I
Sbjct: 405 IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 464



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 23/405 (5%)

Query: 160 LIHGLCNENKMVEAESM-FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ++H      ++ +A+++  R +R  GV   +    AL+   C                  
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGV-SRVEVVEALVSSMCG----------------- 42

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N   N + F +L+    +  +LR     F  +   G   +I   N L+ G  K   +  A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +  E+ +  I  +V+T NI++  LC  G+ +  +  L +M   GI A++VTYN+LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YC+EG +E+A  + + M +KG++P++ T++++I+G CK G    A G+  EM+   L PD
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              +  L+    +  N  E   ++ EML   + P + + SSLI    +N  +  AL +F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF- 281

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D    G   P++V+Y  ++   C +G +L+A K+  +M       D   Y T+L GL
Sbjct: 282 --RDMKKFGLV-PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            + K + D   L  +M++ G +PD      ++ G+ ++G++  A 
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 176/523 (33%), Positives = 266/523 (50%), Gaps = 10/523 (1%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F PS    S L+    + G+I  A  +  K++   V P++   NAL+N + K GK D   
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +  M   GL  + VTY +LID  C +G +  AL+   +M + GI+ TV  Y+ LI G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   K+  A+S+F  M   G+ PN+  Y +L+ GYCK  +++ A   YHEM    + PN 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF  L+ GLC    +  A   F  M ++ V PN   YN LI+GHCK GN   A  L  E
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  + PD +TY  LI GLC  G++  A   +  +  E    N + +++L+ GYCKEG 
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ AL  C +M  +GV  ++V +S LI G  +  +  + + L  +M  + L PD V++T 
Sbjct: 616 LDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +ID  +K GN+K    L+  M+     P+V T ++LI+GL K G +  A     E     
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 735

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN   YA  +  L  +G I KA +L  D+  +    +  TY  ++RG  +  R+
Sbjct: 736 S----LPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRI 790

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            +   +L +MI  GI PD +    ++  Y   GDLK A +  E
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 833



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 158/482 (32%), Positives = 245/482 (50%), Gaps = 4/482 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           +LP I+  + +LNGLI+  +F      ++E+V  GL  DV  Y  ++   C   D ++A 
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAR 235

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +   M   G + +V  Y + I GLC   ++ EA  +   +   G+  ++ TY  L+ G 
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CKV +     E  +EM+     P+      L+DGL K G + +A +    + KFGV P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           FVYN LI+  CK G L EA SL + M    + P+  TY+ILI   C  G+L+ A   L K
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + GI A V  Y+SLI G+CK G +  A S+  +M   G++PNVV ++SLI G CK G 
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A  LY EM  K + P+   FTALI GL     M E  +L+ EM+E  + P+  T + 
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI G  K G    A     E  +K       P+   Y  +I  LC  G++ +A +  +D+
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKG----LVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           + +  + +   ++ +L G  +  R+ D +    +M+  G+  D V   V++ G     D 
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 560 KS 561
           +S
Sbjct: 652 RS 653



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 257/506 (50%), Gaps = 6/506 (1%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L+ GL K  +F++  E   EM+  G V        L+D    +G++  A +L +++   
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P++ +Y  LI+ +C + K+ EAES+F +M   G+ PN  TY+ L+D +CK   ++ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L F  +M    ++  V  +  L+ G CK+G+LRAA + F  M   G+ PN+ +Y  LI G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CK G L  A  L  EM    ISP+ +T+  LI GLC   ++  A  L  +M +  ++ N
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            VTYN LI+G+CKEG+  +A  +  +M EKG+ P+  T+  LI G C  G +  A     
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           ++  +    + + F+AL+ G  K+G + + L   +EML   +   +   S LI+G+ +  
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQ 649

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
              + ++   +  D+       P++VLY  +I A    G +  A  L+  M S+   P+ 
Sbjct: 650 DRRSIIDLLKQMHDQG----LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TYT ++ GL +   M    +L  +M+    +P+       +      G+++ A +  + 
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765

Query: 569 LKESRIGSSETEGHTTRSF--LGHLK 592
           L E  + ++ T     R F  LG ++
Sbjct: 766 LLEGFLANTVTYNILIRGFCKLGRIQ 791



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 229/506 (45%), Gaps = 76/506 (15%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI +F + G ++ AL    K   + +   +   ++L++G  K GK  +    +
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  GL  +VV Y  LI   C +G++  A  L+ EM  KGI P    +T LI GLC+ 
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N+M EA  +F  M E  V+PN  TYN L++G+CK  +  RA E   EM+   L P+  T+
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC  G +  A  F   +       N   ++ L+ G+CK G L +A+  C EM  
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLG 628

Query: 288 FEISPDVFTYNILIKGL-----------------------------------CGVGQLEG 312
             ++ D+  Y++LI G+                                      G L+ 
Sbjct: 629 RGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKM 688

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM----------------- 355
           A GL   M  EG L NVVTY +LI+G CK G M+KA  +C +M                 
Sbjct: 689 AFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 748

Query: 356 -------TEKGVE----------PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
                   EK ++           N VT++ LI G CK G I  A  +   M+   + PD
Sbjct: 749 YLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + ++ +I    + G++KE ++L++ ML   + P     + LI+G    G ++ A   F 
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA---FE 865

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALC 484
            + D    G   PN   Y ++I   C
Sbjct: 866 LRDDMMRRG-VKPNRATYNSLIHGTC 890



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 218/426 (51%), Gaps = 7/426 (1%)

Query: 141 LFDEMID---KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           LF+  +D   K    T + + +LI       + ++   + R M +CG++P + T + +++
Sbjct: 129 LFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLN 188

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G  ++     AL  + E++   L+P+V  +  ++  LC++ +   A      M   G   
Sbjct: 189 GLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDL 248

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN  I G CK   ++EA+ + + +    +  DV TY  L+ GLC V + E  E ++
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M + G + +    ++L+DG  K+G++  A  + +++ + GV P++  +++LI+  CK 
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  L+  M  K L P+ V ++ LID   K G +   L    +M E  I  +V+  
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI G  K G++  A + F    D+       PN V+Y ++I   C +G++  A +L+ 
Sbjct: 429 SSLISGHCKLGKLRAAKSLF----DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    + P+  T+T ++ GL  A RM +   L  +M++  ++P+ V   V++ G+ + G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 558 DLKSAF 563
           +   AF
Sbjct: 545 NTVRAF 550



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 148/296 (50%), Gaps = 1/296 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +ALL+G  K+G+ D   +   EM+  G+  D+V Y VLI     Q D    ++L  +M D
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+ P  V+YT +I        +  A  ++  M   G +PN+ TY AL++G CK+  +++
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     EML  N  PN  T+   +D L   G +  A      + + G   N   YN LI 
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 782

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G + EA  +   M    ISPD  +Y+ +I   C  G L+ A  L + M   G+  
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           + V YN LI G C  G++ KA  +   M  +GV+PN  T++SLI G C   ++ + 
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 4/298 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDS 102
           E  K N   FS L+  + + G +++AL   R++    V   +   + L+ G++++    S
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRS 653

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           + +  ++M   GL  D V Y  +ID     G++  A  L+D M+ +G  P VV YT LI+
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALIN 713

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC    M +AE + R M     +PN  TY   +D      ++ +A++  H++L      
Sbjct: 714 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLA 772

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N VT+ +L+ G CK+G ++ A    V+M   G+ P+   Y+ +I  +C+ G+L EA+ L 
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             M    ++PD   YN LI G C  G+L  A  L   M + G+  N  TYNSLI G C
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 4/198 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    ++G +++A  + R++     LP        L+ L  +G  +   + +
Sbjct: 704 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + ++L G +A+ VTY +LI   C  G + +A  +   MID GI P  + Y+ +I+  C  
Sbjct: 764 D-VLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  ++ SM   GV P+   YN L+ G C   ++ +A E   +M+   ++PN  T+
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882

Query: 228 GVLMDGLCKVGELRAAGN 245
             L+ G C +  + +  +
Sbjct: 883 NSLIHGTCLMSSVSSTAD 900


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/552 (31%), Positives = 282/552 (51%), Gaps = 42/552 (7%)

Query: 54  VFSTLIIAFSEMGHIEE---ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI  + +   + E   A  + RK     +I ACNALL  ++K G  D  W+ YE+ 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 111 V-----------------LC------------------GLVADVVTYGVLIDCCCGQGDV 135
           V                 LC                  G+ AD+VTY  L++  C +G V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A  L D M  KG++P +  Y  LI+GLC E     A+ +   M   G+ PN  T+N +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C+  DV  A   ++EML   + P++++F  ++    + GEL  A  +F  M   G+
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+  +Y  LI+G+C+  ++  A+ + +EM +     DV TYN L+ GLC    L+ A+ 
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L ++M + G+  +  T  +LI GYCK+G+M KALS+   MT + ++P+VVT+++L+DG C
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G ++ A  L+ +M+ + + P  + F+ LI+G    G + E  RL+ EM E  I P++ 
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +++I G  + G +S A +F    T  ++G    P+ + Y  +I +   +    +A  L
Sbjct: 576 TCNTIIKGYLRAGNLSKANDFL--NTMISEG--VPPDCITYNTLINSFVKEENFDRAFFL 631

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            ++M    L P+  TY  +L G  R  RM +  M+L  MI  GI PD      ++ GY  
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691

Query: 556 NGDLKSAFRCSE 567
             ++K AFR  +
Sbjct: 692 KDNMKEAFRVHD 703



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 215/385 (55%), Gaps = 3/385 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ +++       + EA  V+ ++    V+P + + ++++    + G+      ++
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M   GLV D V Y +LI+  C   DV  AL + +EM+++G    VV Y  L++GLC  
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A+ +F+ M E GV P+ YT   L+ GYCK  ++ +AL  +  M   +L+P+VVT+
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LMDG CKVGE+  A   +  M    +FP+   ++ LI+G C  G + EA  L  EM++
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P + T N +IKG    G L  A   L  M  EG+  + +TYN+LI+ + KE + ++
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M E+G+ PN+VT+++++ G  + G +  A  +  +M+ K + PD   +T+LI+
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687

Query: 408 GLSKDGNMKETLRLYKEMLEAKITP 432
           G     NMKE  R++ EML+    P
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVP 712



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 190/347 (54%), Gaps = 3/347 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+++  FS  G +  AL  + K++   ++P       L+NG  +        +   EMV
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G V DVVTY  L++  C    +  A  LF EM+++G+ P     T LIHG C +  M 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S+F +M    + P++ TYN LMDG+CKV ++ +A E +++M+   + P+ ++F +L+
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G C +G +  A   +  M + G+ P +   N +I G+ +AGNL +A    + M    + 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TYN LI         + A  L+  M + G+L N+VTYN+++ G+ + G M++A  V
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             +M +KG+ P+  T++SLI+G     N+  A  ++ EM+ +  VPD
Sbjct: 667 LHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV++ +LI       K+ E    F+ +R+ G   ++   NAL+    KV  V+ A + Y 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           + +      NV T  ++++ LCK G+L   G +   M + GV+ ++  YN L++ +C+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + EA  L   M    + P +FTYN LI GLC  G  E A+ +L +M   G+  N  T+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            ++   C++ D+ +A  V ++M ++GV P++++FSS++    + G +  A+  + +M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            LVPD V++T LI+G  ++ ++   L++  EM+E      V T ++L++GL +   + +A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              F E  ++       P+      +I   C DG + KA  LF  M   +L+PD  TY T
Sbjct: 454 DELFKEMVERG----VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++ G  +   M     L  DMI   I P  +   +++ G+   G +  AFR  + +KE  
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 569

Query: 574 I 574
           I
Sbjct: 570 I 570



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 21/417 (5%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           P   I   LIH L    K+ EA+S+  R +R+ GV             + +V D      
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGV------------SHVEVIDS----L 140

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
                 + N   NVV F +L+    +  +LR     F  + K G   +I   N L+    
Sbjct: 141 ISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIV 200

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G +  A  +  +  K     +V+T NI++  LC  G+L+     L +M ++G+ A++V
Sbjct: 201 KVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLV 260

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+L++ YC+ G + +A  +   M  KG++P + T+++LI+G CK G+ + A  +  EM
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   L P+   F  ++    +  ++ E  R++ EML+  + P + + SS++    +NG +
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             AL +F    +K  G    P+ V+Y  +I   C +  +  A K+ ++M       D  T
Sbjct: 381 GRALAYF----EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVT 436

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           Y T+L GL R K + D   L  +M++ G+ PD      ++ GY ++G++  A    E
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 284/543 (52%), Gaps = 13/543 (2%)

Query: 27  KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA 86
           +SRKP    +  F  L    +P    S  + L+   S  G    A   YR   VL +   
Sbjct: 99  QSRKPREA-FEAFRLLLDHRVP-VPASASNALLAVLSRAGWPHLAQEAYRL--VLSSDSE 154

Query: 87  CNA-----LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            NA     +++   K  +FD       EM    +  DVVT+ VLID     GDV  A+ L
Sbjct: 155 VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D M ++G++P +V Y  ++ GLC   +  +A+ +FR+M +C V P++ ++N L+ G+C+
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V +V  A++FY EM H  + P+VV+F  L+    + GE+  AG +   M   G+ P+  +
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  +I G C+AG++ EA+ +  EM  F   PDV TYN L+ GLC   +L  AE LL +M 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G+  ++ T+ +LI GYC++G+ E AL +   +  + + P+VVT++SLIDG C+ G++ 
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+ +M  + ++P+ + ++ LID   + G +++      EM++    P++ T +S+I
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  ++G +      FL+K  + +     P+ + +  +I     +  +  A  +F+ M  
Sbjct: 515 KGYCRSGNVKKGQQ-FLQKMRQDN---VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           + +RPD  TY  ++ G      M D   +   M   GI PD      ++ G+   G+ K 
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ 630

Query: 562 AFR 564
           AF+
Sbjct: 631 AFQ 633



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 276/548 (50%), Gaps = 11/548 (2%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           P   P VF  LI  +++     EA   +R +    V     A NALL  L + G      
Sbjct: 83  PTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQ 142

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E Y  ++      +  T  +++   C   +   A  +  EM  + + P VV + +LI   
Sbjct: 143 EAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDAR 202

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                +  A ++  SM   G+ P + TYN+++ G CK    ++A E +  M   ++ P+V
Sbjct: 203 FRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDV 262

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            +F +L+ G C+VGE++ A  F+  M    V P++  ++CLI    + G +  A +   E
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+   + PD   Y ++I G C  G +  A  +  +M   G L +VVTYN+L++G CK+  
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A  + ++M E+GV P++ TF++LI G C+ GN + A+ L+  ++ + L PDVV + +
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG+ + G++ +   L+ +M   +I P+  T S LI    + G++ +A  F  E   K 
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +     PN   Y +II+  C  G + K  +    MR DN+ PD  T+ T++ G ++ + M
Sbjct: 503 N----LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENM 558

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
                +   M K  + PDAV   +++ G+ E G+++ A R  + + +S I   E + +T 
Sbjct: 559 HGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGI---EPDRYTY 615

Query: 585 RSFL-GHL 591
            S + GH+
Sbjct: 616 MSLINGHV 623



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 216/381 (56%), Gaps = 3/381 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI  F  +G ++EA+  Y++++   V P + + + L+    ++G+ D    +  EM 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GLV D V Y ++I   C  G + +AL + DEM+  G  P VV Y  L++GLC +++++
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +AE +   M E GV P+L T+  L+ GYC+  +   AL+ +  +L   L+P+VVT+  L+
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG+C+ G+L  A   +  M    + PN   Y+ LID HC+ G + +A     EM K    
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ TYN +IKG C  G ++  +  LQKM ++ +  +++T+N+LI GY KE +M  A +V
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M ++ V P+ VT++ +I+G  + GN+  A  ++  M    + PD   + +LI+G   
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624

Query: 412 DGNMKETLRLYKEMLEAKITP 432
            GN K+  +L+ EM+     P
Sbjct: 625 AGNSKQAFQLHDEMIHRGFAP 645


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/533 (32%), Positives = 273/533 (51%), Gaps = 25/533 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLN--------------- 92
           +P VF  LI ++  MG ++EA    +V +   +L ++  CN+L +               
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTI 214

Query: 93  ---GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
              GL +  + +     +EEM   GL  D      LID    +GD+ + L + D M+  G
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   ++ Y +LIHGLC   KM +A  + + M   G  PN  T+  L++GYC+  ++ RAL
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   EM   NL P+ V++G +++GLC   +L  A      M   G+ PN+ VY+ LI G+
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
              G + EA  L   M    ++PD+F YN +I  L   G++E A   L ++   G+  + 
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT+ + I GY K G M +A     +M + G+ PN   ++ LI+G  KAGN+  A+ ++  
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +    ++PDV   +A I GL K+G ++E L+++ E+ E  + P VFT SSLI G  K G 
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A     E   K      +PN  +Y A++  LC  G I +A KLF  M    L PD+ 
Sbjct: 575 VEKAFELHDEMCLKG----IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY+TM+ G  +++ + +   L  +M   G+ P + +   +V G  + GD++ A
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 683



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 170/551 (30%), Positives = 280/551 (50%), Gaps = 34/551 (6%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           IP  N   ++ LI    + G +E+A  + + +  L   P  +    L+ G  ++      
Sbjct: 275 IP-INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 333

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            E  +EM    LV   V+YG +I+  C   D+  A  L ++M   G++P VV+Y+ LI G
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             +E ++ EA  +   M   GV P+++ YNA++    K   +  A  +  E+    L+P+
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VTFG  + G  K G++  A  +F  M   G+ PN  +Y  LI+GH KAGNL EA+S+  
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 513

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +    + PDV T +  I GL   G+++ A  +  ++ ++G++ +V TY+SLI G+CK+G
Sbjct: 514 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 573

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++EKA  +  +M  KG+ PN+  +++L+DG CK+G+I  A  L+  M  K L PD V ++
Sbjct: 574 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYS 633

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDG  K  N+ E   L+ EM    + P  F  ++L+HG  K G +  A+N F E   K
Sbjct: 634 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 693

Query: 464 TDG----------GYCS--------------------PNHVLYAAIIQALCYDGQILKAS 493
                        GYC                     P+HV Y  +I   C  G++ +A+
Sbjct: 694 GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 753

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF +M+  NL  D  TYT+++ G  +  +  +V  L   M+  G+ PD V   +++  +
Sbjct: 754 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813

Query: 554 QENGDLKSAFR 564
            +  +L  AF+
Sbjct: 814 CKEDNLVEAFK 824



 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 174/525 (33%), Positives = 275/525 (52%), Gaps = 8/525 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+STLI+ ++  G IEEA  +   +    V P I   NA+++ L K GK +    
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +  E+   GL  D VT+G  I      G + +A   FDEM+D G+ P   +YT+LI+G  
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               ++EA S+FR +   GV+P++ T +A + G  K   V  AL+ + E+    L P+V 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G CK GE+  A      M   G+ PNIF+YN L+DG CK+G++  A  L   M
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  + PD  TY+ +I G C    +  A  L  +M  +G+  +   YN+L+ G CKEGDM
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           EKA+++  +M +KG     ++F++LIDG CK+  I  A  L+ EM+ K ++PD V +T +
Sbjct: 681 EKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           ID   K G M+E   L+KEM E  +     T +SL++G  K G+ S     F    +K  
Sbjct: 740 IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF----EKMV 795

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P+ V Y  +I A C +  +++A KL  ++    +      +  ++  L + + + 
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           +   LL +M ++G+ P       +VR + E G +  A R  E +K
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 209/443 (47%), Gaps = 37/443 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI    + G++ EAL ++R +    VLP +Q C+A ++GL+K G+     + +
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+   GLV DV TY  LI   C QG+V KA  L DEM  KGI P + IY  L+ GLC  
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 607

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +F  M E G+ P+  TY+ ++DGYCK  +V  A   +HEM    +QP+   +
Sbjct: 608 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 667

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------------- 254
             L+ G CK G++  A N F  M + G                                 
Sbjct: 668 NALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK 727

Query: 255 -VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            + P+   Y  +ID HCKAG + EA  L  EM++  +  D  TY  L+ G   +GQ    
Sbjct: 728 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 787

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L +KM  +G+  + VTY  +I  +CKE ++ +A  +  ++  KG+         LI  
Sbjct: 788 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 847

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK  ++  A  L  EM    L P +   + L+    + G M E  R+++ +    + P 
Sbjct: 848 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907

Query: 434 VFTVSSLIHGLFKNGRISNALNF 456
             T+  L++G   +    +A N 
Sbjct: 908 TTTLIDLVNGNLNDTDSEDARNL 930



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 194/380 (51%), Gaps = 6/380 (1%)

Query: 52  PSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VF  S+LI  F + G +E+A  ++ ++    + P I   NAL++GL K G      + 
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++ M   GL  D VTY  +ID  C   +V +A +LF EM  KG++P   +Y  L+HG C 
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 676

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E  M +A ++FR M + G    L ++N L+DGYCK   +  A + + EM+   + P+ VT
Sbjct: 677 EGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 735

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++D  CK G++  A   F  M +  +  +   Y  L+ G+ K G   E  +L  +M 
Sbjct: 736 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD  TY ++I   C    L  A  L  ++  +G+L     ++ LI   CK  D+ 
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M E G++P++   S+L+    +AG +D A  ++  +    LVPD      L+
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 915

Query: 407 DGLSKDGNMKETLRLYKEML 426
           +G   D + ++   L K+++
Sbjct: 916 NGNLNDTDSEDARNLIKQLV 935



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 493 SKLFSDMRSDNLR--------PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           S L S +R ++LR        P+  TYT +  GL RAKRM +  +   +M K G+ PD  
Sbjct: 186 SILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 245

Query: 545 INQVMVRGYQENGDLKSAFRCSEFL 569
               ++ G+   GD+    R  + +
Sbjct: 246 ACSALIDGFMREGDIDEVLRIKDVM 270


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 172/519 (33%), Positives = 268/519 (51%), Gaps = 13/519 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F  L+     M   +  + +Y+K+E   +   I + N L+       K       
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + ++   GL  DVVT+  L+   C +  V +AL+ F +M +    P VV +T L++GLC 
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVV 225
           E ++VEA ++   M E G+ P   TY  ++DG CK  D   AL    +M    ++ PNVV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D LCK G    A N F  M + G+FP++F YN +I G C +G   +A  L  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +ISPDV TYN LI      G+   AE L  +M   GI+ N +TY+S+IDG+CK+  +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +   M  KG  PN++TF++LIDG C A  ID  M L  EM    LV D   +  L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK 463
           I G    G++   L L +EM+ + + P + T  +L+ GL  NG++ +AL  F  ++K+ K
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 464 T-DGGY----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             D  +      P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M+ GL
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +  R+ +   +   M      P+ V    ++ GY + G
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 237/443 (53%), Gaps = 22/443 (4%)

Query: 37  SVFNALNSLE-----IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACN 88
           S  N L  +E     IP  N  ++S +I +  + G   +A  ++ +++   + P +   N
Sbjct: 237 SALNLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +++ G    G++    +  +EM+   +  DVVTY  LI+    +G   +A  L+DEM+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P  + Y+ +I G C +N++  AE MF  M   G  PNL T+N L+DGYC    ++  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E  HEM    L  +  T+  L+ G   VG+L AA +    M   G+ P+I   + L+DG
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 269 HCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            C  G L +A+ +   M+K +           + PDV TYNILI GL   G+   AE L 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K   PNVVTF++LI+G CKA
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D  + L+ EM  + +V + + +  LI G  K GN+   L +++EM+ + + P   T+
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 438 SSLIHGLFKNGRISNALNFFLEK 460
            +++ GL+    +  A+   LEK
Sbjct: 655 RNMLTGLWSKEELKRAVA-MLEK 676



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 220/459 (47%), Gaps = 50/459 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TL+      G I EA+ +  ++    + P       +++G+ KKG   S     
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 108 EEMV-LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +M  +  ++ +VV Y  +ID  C  G    A NLF EM +KGI P +  Y  +I G C+
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +  +AE + + M E  + P++ TYNAL++ + K      A E Y EML   + PN +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++DG CK   L AA + F  MA  G  PN+  +N LIDG+C A  + + M L  EM 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +  D  TYN LI G   VG L  A  LLQ+M   G+  ++VT ++L+DG C  G ++
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 347 KALS----------------------------------------------VCSQMTEKGV 360
            AL                                               +  +M  +G+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ +T+SS+IDG CK   +D A  ++  M  KS  P+VV FT LI+G  K G + + L 
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           L+ EM    I  +  T  +LI G  K G I+ AL+ F E
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 224/437 (51%), Gaps = 5/437 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P+VV +  L+  +    +     S+++ M    +  ++Y++N L+ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++    L P+VVTF  L+ GLC    +  A +FF  M +    P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P   TY  ++ G+C  G    A  LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV Y+++ID  CK+G    A ++ ++M EKG+ P++ T++S+I G C 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV + ALI+   K+G   E   LY EML   I P+  T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSPN + +  +I   C   +I    +L 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKG----CSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  D  TY T++ G      +   + LL +MI  G+ PD V    ++ G  +N
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 557 GDLKSAFRCSEFLKESR 573
           G LK A    + +++S+
Sbjct: 479 GKLKDALEMFKVMQKSK 495



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 203/405 (50%), Gaps = 40/405 (9%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+ ++  +  A++ + +ML     P+VV F  LM  + ++       + +  M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +I+ +N LI   C    L  A+S   ++ K  + PDV T+  L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               +M++     NVVT+ +L++G C+EG + +A+++  +M E G++P  +T+ +++DG 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 375 CKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G+  +A+ L  +M  +  ++P+VV+++A+ID L KDG   +   L+ EM E  I P 
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +FT +S+I G   +GR S+A     E  ++      SP+ V Y A+I A   +G+  +A 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERK----ISPDVVTYNALINAFVKEGKFFEAE 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLR--------------------------------- 520
           +L+ +M    + P+  TY++M+ G  +                                 
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405

Query: 521 --AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             AKR+ D M LL +M + G+V D      ++ G+   GDL +A 
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 14/284 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  +     I++ + +  ++    ++      N L++G    G  ++  +  
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-----------GIEPTVVI 156
           +EM+  GL  D+VT   L+D  C  G +  AL +F  M              G+EP V  
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y ILI GL NE K +EAE ++  M   G+VP+  TY++++DG CK + ++ A + +  M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVVTF  L++G CK G +      F  M + G+  N   Y  LI G  K GN+ 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            A+ +  EM    + PD  T   ++ GL    +L+ A  +L+K+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + ++TLI  F  +G +  AL + +++    + P I  C+ LL+GL   GK     E +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488

Query: 108 EEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + M              G+  DV TY +LI     +G  ++A  L++EM  +GI P  + 
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I GLC ++++ EA  MF SM      PN+ T+  L++GYCK   V+  LE + EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  N +T+  L+ G  KVG +  A + F  M   GV+P+      ++ G      L 
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 668

Query: 277 EAMSLCSEMEKFEISPDV 294
            A+++   +EK ++S D+
Sbjct: 669 RAVAM---LEKLQMSMDL 683


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 165/520 (31%), Positives = 266/520 (51%), Gaps = 7/520 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +EEA     ++    + P      AL+NGL K  +        
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALL 336

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  ++V YG L+D    +G   +A ++  EMI  G++P  ++Y  LI GLC  
Sbjct: 337 DEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI 396

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  + + M + G+ P+ +TYN LM G+ +  D + A E  +EM +  + PNV ++
Sbjct: 397 GQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSY 456

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G++++GLC+ GE + AGN    M   G+ PN F+Y  LI GH K GN+  A     +M K
Sbjct: 457 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD+F YN LIKGL  VG++E AE    ++ K G++ +  TY+ LI GYCK G++EK
Sbjct: 517 ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEK 576

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM   G++PN  T++ L++G  K+ + +    +   M+     PD  ++  +I 
Sbjct: 577 ADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIR 636

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LS+  NM+    +  E+ +  + P +   SSLI GL K   +  A+    E   +    
Sbjct: 637 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG--- 693

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  V Y A+I   C  G I +A  +F  + +  L P+  TYT ++ G  +   + D 
Sbjct: 694 -LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             L  +M+  GI PDA +  V+  G  +  DL+ A   +E
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 792



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 172/565 (30%), Positives = 268/565 (47%), Gaps = 14/565 (2%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS----VFSTLII 60
           L  A L+  A  L+  +   +L    P  V  S+  A+   +    +PS    V   L+ 
Sbjct: 125 LCAASLFPQANGLLHQM---ILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVD 181

Query: 61  AFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            + + G +  A  V      + + P  + CN LL  L++    + +W+    M   G++ 
Sbjct: 182 TYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILP 241

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DV TY   I+  C   D   A  +F+EM  +      V Y ++I GLC    + EA    
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M + G+ P+ +TY ALM+G CK + +  A     EM    L+PN+V +G L+DG  K 
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+   A +    M   GV PN  +Y+ LI G CK G L  A  L  EM K  + PD FTY
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N L++G       +GA  LL +M   GIL NV +Y  +I+G C+ G+ ++A ++  +M  
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++PN   ++ LI G  K GNI  A     +M   ++ PD+  + +LI GLS  G M+E
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
               Y ++ +  + P  FT S LIHG  K G +  A     +  +        PN   Y 
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG----LKPNADTYT 597

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +++         K S +   M     +PDN  Y  ++R L R++ M    M+L ++ K 
Sbjct: 598 DLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657

Query: 538 GIVPDAVINQVMVRGYQENGDLKSA 562
           G+VPD  I   ++ G  +  D++ A
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKA 682



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 246/513 (47%), Gaps = 55/513 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  ++  LI    ++G +  A  + +   K+ + P     N L+ G  ++   D  +E  
Sbjct: 382 NKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELL 441

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI------ 161
            EM   G++ +V +YG++I+  C  G+  +A NL +EMI +G++P   +Y  LI      
Sbjct: 442 NEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 501

Query: 162 -----------------------------HGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                                         GL    +M EAE  +  +++ G+VP+ +TY
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           + L+ GYCK  ++ +A +   +ML+  L+PN  T+  L++G  K  +     +    M  
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P+  +Y  +I    ++ N+  A  + +E+EK  + PD+  Y+ LI GLC +  +E 
Sbjct: 622 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEK 681

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A GLL +M KEG+   +V YN+LIDG+C+ GD+ +A +V   +  KG+ PN VT+++LID
Sbjct: 682 AVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALID 741

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G+I  A  LY EM+ + + PD  V+  L  G S   ++++ L L +EM   +   
Sbjct: 742 GNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFN-RGYA 800

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKT----------------DGGYCSPNHVLY 476
           +V   ++L+HG  K G++           D+                   G     H ++
Sbjct: 801 NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF 860

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           A + Q         + S LF+DM +  L P  C
Sbjct: 861 AELQQKKASQSATDRFSLLFTDMINKGLIPPKC 893



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 188/383 (49%), Gaps = 39/383 (10%)

Query: 49  KFNPSVFSTLIIAFSEMGHIE---EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  +++ LII  S+ G+I    EAL    K  V P +   N+L+ GL   G+ +   E
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +Y ++   GLV D  TY  LI   C  G++ KA  L  +M++ G++P    YT L+ G  
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604

Query: 166 NENKMVEAESMFRSM-----------------------------------RECGVVPNLY 190
             N   +  S+ +SM                                    + G+VP+L+
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            Y++L+ G CK+AD+ +A+    EM    L+P +V +  L+DG C+ G++  A N F  +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G+ PN   Y  LIDG+CK G++ +A  L  EM    I+PD F YN+L  G      L
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADL 784

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A  L ++M+  G  ANV  +N+L+ G+CK G +++   +   M ++ + PN  T   +
Sbjct: 785 EQALFLTEEMFNRG-YANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKV 843

Query: 371 IDGQCKAGNIDAAMGLYTEMVIK 393
           +    KAG +  A  ++ E+  K
Sbjct: 844 VSEFGKAGKLGEAHRVFAELQQK 866



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 188/423 (44%), Gaps = 16/423 (3%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P+   +  L   LC  +   +A  +   M      P L            +A + RA++ 
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLV-----------LASIQRAIQ- 160

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +    +  P+     VL+D   K G +R A    + MA  G+ P     N L+    +
Sbjct: 161 DTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR 220

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A  +     L   ME   I PDV+TY+  I+  C     + A+ + ++M +     N VT
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN +I G C+ G +E+A     +M + G+ P+  T+ +L++G CK   +  A  L  EM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P++VV+  L+DG  K+G   E   + KEM+ A + P+     +LI GL K G++ 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A     E           P+   Y  ++Q          A +L ++MR+  + P+  +Y
Sbjct: 401 RASKLLKEMIKVG----LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSY 456

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M+ GL +     +   LL +MI  G+ P+A +   ++ G+ + G++  A    E + +
Sbjct: 457 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516

Query: 572 SRI 574
           + +
Sbjct: 517 ANV 519


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/485 (33%), Positives = 254/485 (52%), Gaps = 19/485 (3%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSVW 104
           +P+V  ++T+I    + G IE AL +Y  + +     P +   + L++GL +  + D   
Sbjct: 62  HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  EEM   G   + VTY  L++   GQG   +A +L ++M   G  P ++ + ++I GL
Sbjct: 122 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGL 181

Query: 165 CNENKMVEAESMFRS-----MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           C E    E E+ FR      M E G+ P++ T+N+++DG CK   +  A   +   L   
Sbjct: 182 CKEG---EIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            +PNVVT+  L+DGL K+ ++  A      M + G   N   Y+ ++DG  K G + +A+
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            +  +M      PD  TYN LI G     +L  A GLL++M + G   +VVTY +L  G 
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PD 398
           C+ G  ++A+ +   M  +G  PN +T+SS++DG CKAG +  A+G + +M    +V P 
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V+ ++ALIDGL K G + E     + M+ A   P V T S LI+GL   GRI   L  F 
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              ++     C P+ V YA ++  LC   ++ +A  LF  MRSD L PD  T  TM+ GL
Sbjct: 479 GMAERG----CVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534

Query: 519 LRAKR 523
           L   R
Sbjct: 535 LEVNR 539



 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 157/478 (32%), Positives = 253/478 (52%), Gaps = 8/478 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +++GL K  K D     +++MV   +  DVVTYG LID    Q  V +A +LF+E   KG
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCKVADVNRA 208
             PTVV Y  +I GLC   ++  A +++  M    G  P + TY+ L+DG C+  +V++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM      PN VT+  L++ L   G  + A +    MA  G  P +  +  +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 269 HCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            CK G +  A  +  EM   E  +SPDV T+N ++ GLC   ++  A  + ++  + G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            NVVTY++LIDG  K   M++AL + ++M E G   N VT+S+++DG  K G ++ A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M     +PD V +  LIDG  K   ++E + L +EMLEA   PSV T ++L HGL +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLR 505
           +GR   A+       D      C+PN + Y++I+  LC  G++ +A   F  M R + + 
Sbjct: 361 SGRFDEAVEIL----DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           P    Y+ ++ GL +A ++ +    L  MI+ G +PD V   +++ G  + G + +  
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/509 (31%), Positives = 258/509 (50%), Gaps = 11/509 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  LI    +   ++EA  ++ +       P +   N +++GL K G+ ++    Y++M
Sbjct: 32  TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 91

Query: 111 VL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            +  G    VVTY  LID  C   +V K   L +EM  +G  P  V Y  L++ L  + +
Sbjct: 92  AIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGR 151

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM--LHHNLQPNVVTF 227
             EA S+   M   G  P L T+  ++ G CK  ++  A     EM  +   L P+V+TF
Sbjct: 152 SKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITF 211

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DGLCK   +  A N F    + G  PN+  Y+ LIDG  K   + EA+ L ++M +
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                +  TY+ ++ GL  VG++E A  +L++M   G L + VTYN+LIDG+ K   + +
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  +M E G  P+VVT+++L  G C++G  D A+ +   M  +   P+ + +++++D
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391

Query: 408 GLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           GL K G + E L  +++M   ++  P V   S+LI GL K G+I  A  F LE+  +   
Sbjct: 392 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEF-LERMIRAGR 450

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ V ++ +I  LC  G+I    +LF  M      PD  TY T++  L RA R+ +
Sbjct: 451 ---IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDE 507

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              L   M   G+ PD    + M+ G  E
Sbjct: 508 AFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 228/447 (51%), Gaps = 43/447 (9%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P+V  +STLI        +++   +  ++      P     N L+N L+ +G+    +
Sbjct: 97  FRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM--IDKGIEPTVVIYTILIH 162
              E+M   G   +++T+G++I   C +G++  A  + DEM  I+ G+ P V+ +  ++ 
Sbjct: 157 SLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLD 216

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC E ++++A ++F+   E G  PN+ TY+ L+DG  K+A ++ AL+   +M+    + 
Sbjct: 217 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 276

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N VT+  ++DGL KVG +  A      M   G  P+   YN LIDG  K   L EA+ L 
Sbjct: 277 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 336

Query: 283 SEM--------------------------EKFEI---------SPDVFTYNILIKGLCGV 307
            EM                          E  EI         +P+  TY+ ++ GLC  
Sbjct: 337 REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 396

Query: 308 GQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           G++  A G  +KM ++ ++A +V+ Y++LIDG CK G +++A     +M   G  P+VVT
Sbjct: 397 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVT 456

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           FS LI+G C AG ID  + L+  M  +  VPD+V +  L+D L +   + E   L+++M 
Sbjct: 457 FSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNA 453
              ++P   T  ++IHGL +  R  +A
Sbjct: 517 SDGLSPDRSTRRTMIHGLLEVNRDEDA 543



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 206/415 (49%), Gaps = 41/415 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+ A    G  +EA  +  ++      P +     ++ GL K+G+ ++ +   
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194

Query: 108 EEMVL--CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL- 164
           +EM +   GL  DV+T+  ++D  C +  ++ A N+F   +++G  P VV Y+ LI GL 
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254

Query: 165 -------------------CNEN---------------KMVEAESMFRSMRECGVVPNLY 190
                              C  N               +M +A  + R MR+ G +P+  
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+DG+ K   +  A+    EML     P+VVT+  L  GLC+ G    A     +M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQ 309
           A  G  PN   Y+ ++DG CKAG + EA+    +M + E+ +P V  Y+ LI GLC  G+
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A   L++M + G + +VVT++ LI+G C  G ++  L +   M E+G  P++VT+++
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           L+D  C+A  +D A  L+ +M    L PD      +I GL +    ++  R+  E
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 5/205 (2%)

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +IDG CK+  +D A+ L+ +MV K++ PDVV + ALIDGL K   +KE   L++E     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+V T +++I GL K GRI NAL  + +       G+  P  V Y+ +I  LC D ++
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMA--IHFGF-RPTVVTYSTLIDGLCRDHEV 117

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            K  KL  +M      P+  TY T++  LL   R  +   LL  M   G  P+ +   ++
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 550 VRGYQENGDLKSAFRCSE--FLKES 572
           ++G  + G++++AFR  +  F+ ES
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIES 202


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 173/542 (31%), Positives = 289/542 (53%), Gaps = 10/542 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L  A++Y +A  +++++   L K+       + V  +  ++ +P F   VF  L  
Sbjct: 16  VAHILFCARMYYDANRILREMV--LSKAELKDCDVFDVLWSTRNVCVPGF--GVFDALFS 71

Query: 61  AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
              E    EEAL  + K++   V P  ++CN LL+   + GK D +  F+++M+  G   
Sbjct: 72  VLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKP 131

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            V TY ++IDC C +GD+  A  LF+EM  +G+ P  V Y  +I G     ++ +    F
Sbjct: 132 TVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFF 191

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+     P++ TYN L++ +CK   + + LEF+ EM    L+PNVV++  L+D  CK 
Sbjct: 192 EEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKE 251

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             ++ A  F+V M + G+ PN   Y  L+D +CK GNL +A  L  EM +  +  +V TY
Sbjct: 252 DMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTY 311

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI GLC V +++ AE L  KM   G++ N+ +Y +LI G+ K  +M++AL +  +M  
Sbjct: 312 TALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKG 371

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++P+++ + + I   C    I+AA  +  EM  K +  +  ++T L+D   K  N  E
Sbjct: 372 RGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSE 431

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L L +EMLE  I  +  T   LI GL KN  +S A+++F   ++  D G    N  +Y 
Sbjct: 432 GLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN--DFGL-QANAAIYT 488

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC + Q+  A+ LF  M    L PD   YT+++ G L+   ++  + L   M ++
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548

Query: 538 GI 539
           G+
Sbjct: 549 GV 550



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 39/347 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  F + G + + L  +R+++   + P + + + L++   K+       +FY +M
Sbjct: 205 TYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDM 264

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLV +  TY  L+D  C  G++  A  L DEM   G+E  VV YT LI GLC+  ++
Sbjct: 265 RRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERI 324

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE +F  M   GV+PNL +Y AL+ G+ K  +++RALE   EM    ++P+++ +G  
Sbjct: 325 KEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF 384

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN---------------- 274
           +  LC + ++ AA      M + G+  N F+Y  L+D + K+ N                
Sbjct: 385 IWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDI 444

Query: 275 LFEAMSLCSEME--------------------KFEISPDVFTYNILIKGLCGVGQLEGAE 314
              A++ C  ++                     F +  +   Y  +I GLC   Q+E A 
Sbjct: 445 EVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAAT 504

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            L ++M ++G++ +   Y SLIDG  K+G++ +AL++  +M E GVE
Sbjct: 505 TLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 158/324 (48%), Gaps = 4/324 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P    F  L   L +      A   F  M +  VFP     N L+    + G        
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M      P VFTYNI+I  +C  G +E A GL ++M   G++ + VTYNS+IDGY K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G ++  +    +M     EP+V+T+++LI+  CK G +   +  + EM    L P+VV 
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           ++ L+D   K+  M++ L+ Y +M    + P+  T +SL+    K G +S+A        
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRL----A 296

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+        N V Y A+I  LC   +I +A +LF  M +  + P+  +YT ++ G ++A
Sbjct: 297 DEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKA 356

Query: 522 KRMLDVMMLLADMIKMGIVPDAVI 545
           K M   + LL +M   GI PD ++
Sbjct: 357 KNMDRALELLDEMKGRGIKPDLLL 380



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 12/319 (3%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLC-SEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           FGVF  +F  + LI+      ++FE    C S+M++  + P   + N L+     +G+ +
Sbjct: 63  FGVFDALF--SVLIEE-----DMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTD 115

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           G +   + M   G    V TYN +ID  CKEGD+E A  +  +M  +G+ P+ VT++S+I
Sbjct: 116 GMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMI 175

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  K G +D  +  + EM   S  PDV+ +  LI+   K G + + L  ++EM ++ + 
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLK 235

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V + S+L+    K   +  AL F++   D    G   PN   Y +++ A C  G +  
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQALKFYV---DMRRLGLV-PNEHTYTSLVDAYCKIGNLSD 291

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +L  +M    +  +  TYT ++ GL   +R+ +   L   M+  G++P+      ++ 
Sbjct: 292 AFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIH 351

Query: 552 GYQENGDLKSAFRCSEFLK 570
           G+ +  ++  A    + +K
Sbjct: 352 GFVKAKNMDRALELLDEMK 370



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 4/261 (1%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P    ++ L   L      E A     KM +  +     + N L+  + + G  +     
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G +P V T++ +ID  CK G+I+AA GL+ EM  + L+PD V + ++IDG  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + +T+  ++EM      P V T ++LI+   K G++   L FF E   K  G    P
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM--KQSG--LKP 236

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y+ ++ A C +  + +A K + DMR   L P+  TYT+++    +   + D   L 
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLA 296

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
            +M ++G+  + V    ++ G
Sbjct: 297 DEMSQVGVEWNVVTYTALIDG 317



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 4/240 (1%)

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +++L     +E   E+AL   S+M    V P   + + L+    + G  D     + +M+
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P V  +  +ID + K+G+++    L++EM    + P   T +S+I G  K GR+ 
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           + + FF E    +    C P+ + Y  +I   C  G++ K  + F +M+   L+P+  +Y
Sbjct: 186 DTVYFFEEMKSMS----CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSY 241

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +T++    +   M   +    DM ++G+VP+      +V  Y + G+L  AFR ++ + +
Sbjct: 242 STLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQ 301



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 7/176 (3%)

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VP   VF AL   L ++   +E L+ + +M   ++ P   + + L+H   + G+      
Sbjct: 60  VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKR 119

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           FF +      G    P    Y  +I  +C +G I  AS LF +M+   L PD  TY +M+
Sbjct: 120 FFKDMI----GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMI 175

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            G  +  R+ D +    +M  M   PD +    ++  + + G L       EF +E
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGL---EFFRE 228


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 298/593 (50%), Gaps = 43/593 (7%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           IP  N   ++ LI    + G +E+A  + + +  L   P  +    L+ G  ++      
Sbjct: 364 IP-INLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            E  +EM    LV   V+YG +I+  C   D+  A  L ++M   G++P VV+Y+ILI  
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             +E ++ EA  +   M   GV P+++ YNA++    K   +  A  +  E+    L+P+
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VTFG  + G  K G++  A  +F  M   G+ PN  +Y  LI+GH KAGNL EA+S+  
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +    + PDV T +  I GL   G+++ A  +  ++ ++G++ +V TY+SLI G+CK+G
Sbjct: 603 RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 662

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++EKA  +  +M  KG+ PN+  +++L+DG CK+G+I  A  L+  M  K L PD V ++
Sbjct: 663 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYS 722

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDG  K  N+ E   L+ EM    + P  F  ++L+HG  K G +  A+N F E   K
Sbjct: 723 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782

Query: 464 TDG----------GYCS--------------------PNHVLYAAIIQALCYDGQILKAS 493
                        GYC                     P+HV Y  +I   C  G++ +A+
Sbjct: 783 GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF +M+  NL  D  TYT+++ G  +  +  +V  L   M+  G+ PD V   +++  +
Sbjct: 843 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902

Query: 554 QENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVY-KEQDLSICS 605
            +  +L  AF+    L++  +G    +G  T+  +  L  T   K +DL+  S
Sbjct: 903 CKEDNLVEAFK----LRDEVVG----KGMLTKGTIHDLLITALCKREDLTEAS 947



 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 186/616 (30%), Positives = 284/616 (46%), Gaps = 104/616 (16%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           +P VF  LI ++  MG ++EA    +V +   +L ++  CN+LL  L+K G  +  W+ Y
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M+   +  DV TY  L+   C  GD+  A  +  EM +KG+ P   IY+++I G+C  
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP----- 222
             + EA  + RSM E G+VPN YTY  +  G C+   +N A   + EM    L+P     
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 223 ------------------------------NVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
                                         N++T+ VL+ GLCK G++  A      M  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN   +  LI+G+C+  N+  A+ L  EMEK  + P   +Y  +I GLC    L  
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA------------------------ 348
           A  LL+KM   G+  NVV Y+ LI  Y  EG +E+A                        
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 349 -LSVCSQMTE----------KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
            LS   +M E          +G++P+ VTF + I G  K G +  A   + EM+   L+P
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +  ++T LI+G  K GN+ E L +++ +    + P V T S+ IHGL KNGR+  AL  F
Sbjct: 577 NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636

Query: 458 LEKTDK-----------TDGGYC--------------------SPNHVLYAAIIQALCYD 486
            E  +K              G+C                    +PN  +Y A++  LC  
Sbjct: 637 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G I +A KLF  M    L PD+ TY+TM+ G  +++ + +   L  +M   G+ P + + 
Sbjct: 697 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756

Query: 547 QVMVRGYQENGDLKSA 562
             +V G  + GD++ A
Sbjct: 757 NALVHGCCKEGDMEKA 772



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 277/548 (50%), Gaps = 35/548 (6%)

Query: 49   KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            K N  V+S LI+A++  G IEEA  +   +    V P I   NA+++ L K GK +    
Sbjct: 470  KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 106  FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +  E+   GL  D VT+G  I      G + +A   FDEM+D G+ P   +YT+LI+G  
Sbjct: 530  YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 166  NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                ++EA S+FR +   GV+P++ T +A + G  K   V  AL+ + E+    L P+V 
Sbjct: 590  KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 226  TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            T+  L+ G CK GE+  A      M   G+ PNIF+YN L+DG CK+G++  A  L   M
Sbjct: 650  TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 286  EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             +  + PD  TY+ +I G C    +  A  L  +M  +G+  +   YN+L+ G CKEGDM
Sbjct: 710  PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 346  EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            EKA+++  +M +KG     ++F++LIDG CK+  I  A  L+ EM+ K ++PD V +T +
Sbjct: 770  EKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE------ 459
            ID   K G M+E   L+KEM E  +     T +SL++G  K G+ S     F +      
Sbjct: 829  IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGV 888

Query: 460  KTDKTDGG-----YCSPNHVLYA--------------------AIIQALCYDGQILKASK 494
            K D+   G     +C  ++++ A                     +I ALC    + +ASK
Sbjct: 889  KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 948

Query: 495  LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            L  +M    L+P      T++R    A +M +   +   +  +G+VPD      +V G  
Sbjct: 949  LLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNL 1008

Query: 555  ENGDLKSA 562
             + D + A
Sbjct: 1009 NDTDSEDA 1016



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 209/443 (47%), Gaps = 37/443 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N  +++ LI    + G++ EAL ++R++    VLP +Q C+A ++GL+K G+     + +
Sbjct: 577  NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             E+   GLV DV TY  LI   C QG+V KA  L DEM  KGI P + IY  L+ GLC  
Sbjct: 637  SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
              +  A  +F  M E G+ P+  TY+ ++DGYCK  +V  A   +HEM    +QP+   +
Sbjct: 697  GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------------- 254
              L+ G CK G++  A N F  M + G                                 
Sbjct: 757  NALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK 816

Query: 255  -VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
             + P+   Y  +ID HCKAG + EA  L  EM++  +  D  TY  L+ G   +GQ    
Sbjct: 817  QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 876

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L +KM  +G+  + VTY  +I  +CKE ++ +A  +  ++  KG+         LI  
Sbjct: 877  FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 936

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             CK  ++  A  L  EM    L P +     L+    + G M E  R+++ +    + P 
Sbjct: 937  LCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996

Query: 434  VFTVSSLIHGLFKNGRISNALNF 456
              T+  L++G   +    +A N 
Sbjct: 997  TTTLIDLVNGNLNDTDSEDARNL 1019



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 194/380 (51%), Gaps = 6/380 (1%)

Query: 52   PSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            P VF  S+LI  F + G +E+A  ++ ++    + P I   NAL++GL K G      + 
Sbjct: 646  PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            ++ M   GL  D VTY  +ID  C   +V +A +LF EM  KG++P   +Y  L+HG C 
Sbjct: 706  FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            E  M +A ++FR M + G    L ++N L+DGYCK   +  A + + EM+   + P+ VT
Sbjct: 766  EGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 824

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +  ++D  CK G++  A   F  M +  +  +   Y  L+ G+ K G   E  +L  +M 
Sbjct: 825  YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               + PD  TY ++I   C    L  A  L  ++  +G+L     ++ LI   CK  D+ 
Sbjct: 885  AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            +A  +  +M E G++P++   ++L+    +AG +D A  ++  +    LVPD      L+
Sbjct: 945  EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004

Query: 407  DGLSKDGNMKETLRLYKEML 426
            +G   D + ++   L K+++
Sbjct: 1005 NGNLNDTDSEDARNLIKQLV 1024


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 165/507 (32%), Positives = 267/507 (52%), Gaps = 8/507 (1%)

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF-DSVWEFYEEMVLCGLV 116
           A S   +I++AL  +  +   + LP I     LL+ ++K G++ D V    ++M L GL 
Sbjct: 66  ASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLS 125

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            ++ T  + ++C C    V    ++  ++I  G++PT+V +T LI+GLC   +  +A  +
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F  M   G  P++YTYN +++G CK+ +   A     +M     QPN+VT+  L+D LC+
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
              +  A + F +M   G+ P+IF Y  LI G CK     EA +L +EM    I PD+ T
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N+L+   C  G++  A G+L+ M + G+  NVVTY+SL+ GY    D+ +A  +   M 
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            KG +PN+ +++ LI+G CKA  ID AM L+ EM+ + L P+ V +  LI G  + G ++
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLR 425

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L++ M      P +FT S L+ G  K G +  A   F          Y  PN V+Y
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLF----RAMQSTYLKPNLVMY 481

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++ A+C  G    A KLFS++    L+P    YTT++ GL +   + + +    +M  
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
            G  PD +   V++RG  ++ D   A 
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRAL 568



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 243/469 (51%), Gaps = 9/469 (1%)

Query: 44  SLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+   +P++++  I    F ++  ++    V  K+  L   P I     L+NGL K G
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +F    E +++MV  G   DV TY  +I+  C  G+   A  L  +M + G +P +V Y+
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LI  LC +  + EA  +F  M+  G+ P+++TY +L+ G CK +    A    +EM   
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ P++VTF VL+D  CK G++  A      M + GV PN+  Y+ L+ G+    ++ EA
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             L   M      P++F+YNILI G C   +++ A  L  +M  +G+  N V+YN+LI G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C+ G + +A  +   M   G  P++ T+S L+DG CK G +  A  L+  M    L P+
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +V++T L+  + K GN K+  +L+ E+    + P V   +++I+GL K G +  AL  F 
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF- 536

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            +  + DG  C P+ + Y  II+ L       +A  L  +MR      D
Sbjct: 537 -RNMEADG--CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 194/352 (55%), Gaps = 3/352 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +STLI +      + EAL ++  ++   + P I    +L+ GL K  ++       
Sbjct: 232 NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALL 291

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM    ++ D+VT+ VL+D  C +G V +AL +   M + G+EP VV Y+ L++G    
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VEA  +F  M   G  PN+++YN L++GYCK   ++ A++ ++EM+H  L PN V++
Sbjct: 352 TDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSY 411

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C++G+LR A + F +M   G  P++F Y+ L+DG CK G L +A  L   M+ 
Sbjct: 412 NTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P++  Y IL+  +C  G  + A  L  +++ +G+  +V  Y ++I+G CKEG +++
Sbjct: 472 TYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDE 531

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           AL     M   G  P+ ++++ +I G  +  +   A+ L  EM  +  + DV
Sbjct: 532 ALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 201/396 (50%), Gaps = 9/396 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVA---DVNRALEFYHEMLHHNLQPNVVTFG 228
           +A + F  M     +P +  +  L+    K+    DV  +L    E++   L PN+ T  
Sbjct: 75  DALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELV--GLSPNIYTLS 132

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           + M+  C++  +    +    + K G+ P I  +  LI+G CK G   +A+ L  +M   
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PDV+TYN +I GLC +G+   A GLL+KM + G   N+VTY++LID  C++  + +A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L + S M  KG+ P++ T++SLI G CK      A  L  EM   +++PD+V F  L+D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K+G + E L + K M E  + P+V T SSL++G      +  A   F     K     
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG---- 368

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN   Y  +I   C   +I +A +LF++M    L P+N +Y T++ G  +  ++ +  
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            L  +M   G +PD     +++ G+ + G L  AFR
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 182/608 (29%), Positives = 295/608 (48%), Gaps = 57/608 (9%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L +++    L +  P     S+F  L +S  +   + +VF  ++ 
Sbjct: 96  LHILTRFKLYKTAQTLAQELA---LSASDPSGS--SIFQCLKDSYHVYNSSSAVFDLMVK 150

Query: 61  AFSEMGHIEEAL-------------------------------------WVYRKI---EV 80
           ++S +  I++A+                                      VYR++    V
Sbjct: 151 SYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRV 210

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P +   N L+ G    G+       + EM   G + +VVTY  LID  C  G + +A  
Sbjct: 211 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 270

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L   M  KG++P ++ Y ++I+GLC E  M EA  +   M   G  P+  TYN L++GYC
Sbjct: 271 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 330

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  + ++AL  + EM+ + + P+VVT+  L++ +CK   L  A  FF  M   G+ PN  
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LIDG  + G L EA  + +EM +   SP V TYN  I G C + ++E A G++Q+M
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            ++G+  +VV+Y+++I G+C++G++++A  +  +M EKGV P+ VT+SSLI G C+   +
Sbjct: 451 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L  EM+   L PD   +T LI+    +G++ + L L+ EM+     P   T S L
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 570

Query: 441 IHGLFKNGRISNA----LNFFLEKTDKTDGGY------CSP-NHVLYAAIIQALCYDGQI 489
           I+GL K  R   A         E++  +D  Y      CS        A+I+  C  G +
Sbjct: 571 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 630

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F  M   N +P    Y  ++ G  R   +     L  +MI  G VP  V    +
Sbjct: 631 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 690

Query: 550 VRGYQENG 557
           ++   + G
Sbjct: 691 IKALFKEG 698



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 197/439 (44%), Gaps = 90/439 (20%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P    ++TL+  + + G+  +AL ++ ++    V P++    AL+N + K    +   
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           EF+++M + GL  +  TY  LID    QG + +A  + +EM + G  P+VV Y   IHG 
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +M EA  + + M E G+ P++ +Y+ ++ G+C+  +++RA +   EM+   + P+ 
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 494

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ GLC++  L  A +    M   G+ P+ F Y  LI+ +C  G+L +A+ L  E
Sbjct: 495 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 554

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVV------------- 330
           M      PD  TY++LI GL    +   A+ LL K+ Y+E + ++V              
Sbjct: 555 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF 614

Query: 331 ------------------------------------TYNSLIDGYCKEGDMEKALSVCSQ 354
                                                YN +I G+C+ G++ KA ++  +
Sbjct: 615 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 674

Query: 355 MTEKGVEPNVVTFSSLIDG-------------------QC----------------KAGN 379
           M   G  P+ VT  +LI                      C                K GN
Sbjct: 675 MIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGN 734

Query: 380 IDAAMGLYTEMVIKSLVPD 398
           ++A + + T+M    L+P+
Sbjct: 735 MEAVLNVLTDMAKDGLLPN 753


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 167/519 (32%), Positives = 276/519 (53%), Gaps = 22/519 (4%)

Query: 66  GHIE--EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           GHI+  EA  V+  +   +  P I + N LL  + K  ++  V   Y+ M L GL  D +
Sbjct: 69  GHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFI 128

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T  +LI+C C    V   L +  EM+ +G  P  V +T L+ GLC  +++ EA  + R M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN------LQPNVVTFGVLMDGL 234
              G  PN+ TY  L++G C   +   A++ + EML+ N      ++PN+V +  ++D L
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G +      F+ M   G+ P++  Y+ +I G C  G    A  L +EM    + P+V
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N+LI  LC  G++E A  LL+ M + G   +  TYN+LIDG+C EG ++ A  +   
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG+E + V+++ LI+G CK+G +  A  LY EM+ K ++P V+ +  L+ GL ++G 
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPN 472
           +++   L+ EM    +TP   T + L+ GL KN  +S A+  F  LE  D        P+
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD------FQPS 482

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
             ++  +I  LC   +I  A +LF+ +  + L P+  TYT M+ GL ++ ++ +   L  
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFL 542

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            M + G  P+ V    ++RG+ +N +++   +  E L+E
Sbjct: 543 GMEEKGCAPNLVTFNTLMRGFCQNDEMQ---KVVELLQE 578



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 202/376 (53%), Gaps = 3/376 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   + T+I +  + G I++   ++ +++   + P + A +++++G+   G+++    
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EMV  G+  +VVT+ VLID  C  G + +A +L   MI +G  P    Y  LI G C
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFC 354

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E ++ +A  +F SM   G+  +  +YN L++GYCK   +  A + Y EM+   + P V+
Sbjct: 355 LEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVI 414

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ GL + G++R A N F  M    + P    YN L+DG CK  +L EAM L   +
Sbjct: 415 TYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL 474

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E  +  P +  +N LI GLC   ++E A  L  ++  EG+  NV+TY  +I G CK G +
Sbjct: 475 ENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQL 534

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A  +   M EKG  PN+VTF++L+ G C+   +   + L  EM  K   PD    + +
Sbjct: 535 ENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIV 594

Query: 406 IDGLSKDGNMKETLRL 421
           +D LSKD   +E L L
Sbjct: 595 VDLLSKDEKYREYLHL 610



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 216/445 (48%), Gaps = 13/445 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F++L+        I EA  + RK+  +   P +     LLNGL   G      + +
Sbjct: 161 NTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLH 220

Query: 108 EEMVL------CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           EEM+         +  ++V Y  +ID  C  G + K   LF EM  +GI P VV Y+ +I
Sbjct: 221 EEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSII 280

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           HG+C+  +   A+ +F  M + GV PN+ T+N L+D  CK   +  A      M+     
Sbjct: 281 HGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES 340

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+  T+  L+DG C  G +  A + FV M   G+  +   YN LI+G+CK+G + EA  L
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM   EI P V TYN L+ GL   G++  A  L  +M    +     TYN L+DG CK
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              + +A+ +   +     +P++  F+ LIDG CKA  I+ A  L+  +  + L P+V+ 
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T +I GL K G ++    L+  M E    P++ T ++L+ G  +N  +   +    E  
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMA 580

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYD 486
           +K      SP+    + ++  L  D
Sbjct: 581 EKD----FSPDASTISIVVDLLSKD 601



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 205/393 (52%), Gaps = 2/393 (0%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           + + P +     +++ L K G  D   E + EM   G+  DVV Y  +I   C  G    
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF+EM+D+G+ P VV + +LI  LC   KM EA  + + M + G  P+ +TYN L+D
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G+C    ++ A + +  M    ++ + V++ VL++G CK G +  A   +  M    + P
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +  YN L+ G  + G + +A +L  EM+  +++P+  TYNIL+ GLC    L  A  L 
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELF 471

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             +       ++  +N LIDG CK   +E A  + ++++ +G+EPNV+T++ +I G CK+
Sbjct: 472 HYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKS 531

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G ++ A  L+  M  K   P++V F  L+ G  ++  M++ + L +EM E   +P   T+
Sbjct: 532 GQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTI 591

Query: 438 SSLIHGLFKNGRISNALNFF--LEKTDKTDGGY 468
           S ++  L K+ +    L+         +T  GY
Sbjct: 592 SIVVDLLSKDEKYREYLHLLPTFPAQGQTGRGY 624



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 164/314 (52%), Gaps = 7/314 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   F+ LI A  + G +EEA     L + R     P     N L++G   +G+ D   +
Sbjct: 307 NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES--PDTFTYNTLIDGFCLEGRIDDARD 364

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +  M   G+  D V+Y VLI+  C  G +++A  L+ EM+ K I PTV+ Y  L+ GL 
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLF 424

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ +A ++F  M+   + P   TYN L+DG CK   ++ A+E +H + +H+ QP++ 
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            F  L+DGLCK  ++  A   F  ++  G+ PN+  Y  +I G CK+G L  A  L   M
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM 544

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+   +P++ T+N L++G C   +++    LLQ+M ++    +  T + ++D   K+   
Sbjct: 545 EEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604

Query: 346 EKALSVCSQMTEKG 359
            + L +      +G
Sbjct: 605 REYLHLLPTFPAQG 618


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 163/494 (32%), Positives = 260/494 (52%), Gaps = 18/494 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I + N LL GL K   +  ++  Y EM L GL  D+ T  +L +C C    V +AL 
Sbjct: 88  IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALA 147

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
               ++ +G  P VV YT LI GLC E+++ EA  +F  M++ G  PN  TY  L+ G C
Sbjct: 148 AMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLC 207

Query: 201 KVADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +  +VN AL+ + EML+       N +P V+T+ +++DGLCKVG    A   F  M   G
Sbjct: 208 QTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQG 267

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  Y+ LI G C AG   ++  L  EM    + PD+ T+++LI  LC  G++  A+
Sbjct: 268 MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL+ M + GI+ N++TYNSLIDG+C  GD+  A  +   M  KG+EP+ +++++LI+G 
Sbjct: 328 KLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGY 387

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   +  AM LY EM+     P+V  +  L+ GL + G + +  +L+  M    ++ + 
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL----YAAIIQALCYDGQIL 490
                 + GL KN  +  A+  F E          S N  L    Y+ +I  LC  G++ 
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELK--------SYNFKLNIENYSCLIDGLCKAGKLE 499

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A +LF  +  + L+PD  TY  M+ G  +  ++ +  +L   M + G  PD +    ++
Sbjct: 500 TAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559

Query: 551 RGYQENGDLKSAFR 564
            G+ E   L+   +
Sbjct: 560 CGFCEGNKLEEVIK 573



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 250/467 (53%), Gaps = 10/467 (2%)

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             + F++ M+    +  + ++  L+          +  +L++EM   G+ P +   +IL 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + LCN N++ EA +    +   G +PN+ TY  L+ G C    ++ A   +  M      
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHM----AKFGV--FPNIFVYNCLIDGHCKAGNL 275
           PN VT+G L+ GLC+ G +  A      M    +++GV   P +  Y+ +IDG CK G  
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM+   + PDV +Y+ LI G C  G+ + ++ L  +M  +G+  ++VT++ L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID  CKEG + +A  +   M ++G+ PN++T++SLIDG C  G++++A  L+  M  K L
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD + +T LI+G  K   +KE + LY EML+   +P+V T  +L+ GLF+ G++ +A  
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F     KT G   S N  +Y   +  LC +  + +A +LF++++S N + +   Y+ ++
Sbjct: 434 LF--GVMKTYG--VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLI 489

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            GL +A ++     L   + + G+ PD V   +M+ G+ + G + +A
Sbjct: 490 DGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 230/410 (56%), Gaps = 13/410 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFD 101
           N   + TLI    + G++  AL ++++         +   P +   + +++GL K G+ D
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLID--CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
              E +EEM   G++ DV++Y  LI   CC G+ D  K  +LFDEM+D+G++P +V +++
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK--HLFDEMVDQGVQPDMVTFSV 312

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI  LC E K+ EA+ +   M + G+VPNL TYN+L+DG+C V D+N A E +  M    
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L+P+ +++  L++G CK  +++ A N +  M + G  PN+  Y  L+ G  + G + +A 
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L   M+ + +S +   Y I + GLC    L  A  L  ++       N+  Y+ LIDG 
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +E A  +  +++++G++P+VVT++ +I G CK G +D A  L+ +M      PD+
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           + +  L+ G  +   ++E ++L  +M++  ++P+  + + ++  L K+ +
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 228/447 (51%), Gaps = 17/447 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI        I EA  ++ +++ L   P       L+ GL + G  +   + +
Sbjct: 160 NVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLH 219

Query: 108 EEM--------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           +EM        V C     V+TY ++ID  C  G   +A  LF+EM  +G+ P V+ Y+ 
Sbjct: 220 KEMLNDASQYGVNCK--PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYST 277

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LIHG C   K  +++ +F  M + GV P++ T++ L+D  CK   V  A +    M+   
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG 337

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           + PN++T+  L+DG C VG+L +A   F+ M   G+ P+   Y  LI+G+CK   + EAM
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L +EM +   SP+V TY  L+KGL   G++  A+ L   M   G+ AN   Y   +DG 
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGL 457

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK   + +A+ + +++     + N+  +S LIDG CKAG ++ A  L+ ++  + L PDV
Sbjct: 458 CKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDV 517

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  +I G  K G +     L+++M E   TP +   ++L+ G  +  ++   +   L 
Sbjct: 518 VTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIK-LLH 576

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYD 486
           K  + D    SPN      ++  LC D
Sbjct: 577 KMVQKD---VSPNAASCTIVVDMLCKD 600



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 12/336 (3%)

Query: 235 CKVGELRA--AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           CK G + A  A +FF  M +    P I  +N L+ G  K  +  +  SL +EM    +SP
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D+FT +IL   LC V ++  A   +  + + G + NVVTY +LI G C E  + +A  + 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS------LVPDVVVFTALI 406
            +M + G  PN VT+ +LI G C+ GN++ A+ L+ EM+  +        P V+ ++ +I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL K G   E   L++EM    + P V + S+LIHG    G+   + + F E  D+   
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG-- 302

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ V ++ +I  LC +G++ +A KL   M    + P+  TY +++ G      +  
Sbjct: 303 --VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              L   M   G+ PD +    ++ GY +   +K A
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 199/658 (30%), Positives = 310/658 (47%), Gaps = 89/658 (13%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSL-----EIPKFNPSVFSTLIIAFSEMGHIEEALWV 74
           ++ E LL++RKP          L+SL     E    N +VF   I  F  +G + EA  V
Sbjct: 141 NMLEKLLQTRKPP------LEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSV 194

Query: 75  Y-RKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
           +   I     P +  CN L+  L+K       W+ Y  MV   +V DV TY  +I   C 
Sbjct: 195 FIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCK 254

Query: 132 QGDVMKAL------------NLF---------------DE-------MIDKGIEPTVVIY 157
            GDV+K              NLF               DE       M++KG+ P    Y
Sbjct: 255 VGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTY 314

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           T+L+ G C + +  EA+ +F SM   G+ PN +TY AL+DG+ K  ++  AL    EM+ 
Sbjct: 315 TLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMIT 374

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L+ NVVT+  ++ G+ K GE+  A + F  M   G+ P+ + YN LIDG+ K+ ++ +
Sbjct: 375 RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAK 434

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +EM+  +++P  FTY++LI GLC    L+ A  +L +M + G+  NV  Y +LI 
Sbjct: 435 ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIK 494

Query: 338 GY-----------------------------------CKEGDMEKALSVCSQMTEKGVEP 362
            Y                                   C+   +E+A  +   M EKG++P
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N  T+ + I+   K+G I  A   + +M+   +VP+ V++T LI G    GN  E L  +
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           K MLE  + P +   S++IH L KNG+   A+  FL K  KT      P+  LY ++I  
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL-KFLKTG---VVPDVFLYNSLISG 670

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR--GLLRAKRMLDVMMLLADMIKMGIV 540
            C +G I KAS+L+ +M  + + P+   Y T++   G  ++  + +   L  +MI  GI 
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS 730

Query: 541 PDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKE 598
           PD  I  +++ G  + G+L+ A       ++  +GS         SF  H K    +E
Sbjct: 731 PDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 788



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 276/548 (50%), Gaps = 13/548 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I   ++ G + +A+ ++ ++    + P     N L++G +K        E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM    L     TY VLI   C   D+ KA  + D+MI  G++P V +Y  LI    
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E++   A  + + M   GV+P+L+ YN L+ G C+   V  A     +M    ++PN  
Sbjct: 498 QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G  ++   K GE++ A  +F  M   G+ PN  +Y  LI GHC  GN  EA+S    M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  + PD+  Y+ +I  L   G+ + A G+  K  K G++ +V  YNSLI G+CKEGD+
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLID--GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           EKA  +  +M   G+ PN+V +++LI+  G CK+GN+  A  L+ EM+ K + PD  ++ 
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 737

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDG  K+GN+++ L L+ E  + K   S+   +SLI    K+G++  A   F +  DK
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 796

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +PN V Y  +I A      + +A +LF DM + N+ P+  TYT++L    +   
Sbjct: 797 K----LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
              ++ L  DM   GI  DA+   VM   Y + G    A +    L +S +   + E   
Sbjct: 853 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK---LLNKSLVEGIKLEDDV 909

Query: 584 TRSFLGHL 591
             + + HL
Sbjct: 910 FDALIFHL 917



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 251/500 (50%), Gaps = 12/500 (2%)

Query: 52  PSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+VF   TLI A+ +    E A+ + + +    VLP +   N L+ GL +  K +     
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +M   G+  +  TYG  I+     G++  A   F +M+  GI P  VIYTILI G C+
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
               VEA S F+ M E G++P++  Y+A++    K      A+  + + L   + P+V  
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID--GHCKAGNLFEAMSLCSE 284
           +  L+ G CK G++  A   +  M   G+ PNI VYN LI+  G+CK+GNL EA  L  E
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDE 723

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    ISPD + Y ILI G    G LE A  L  +  ++ +  ++  +NSLID +CK G 
Sbjct: 724 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGK 782

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A  +   M +K + PN+VT++ LID   KA  ++ A  L+ +M  ++++P+ + +T+
Sbjct: 783 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 842

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+   ++ GN  + + L+K+M    I         +     K G+   AL       +K+
Sbjct: 843 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL----NKS 898

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                     ++ A+I  LC + QI    +L S+M  + L   + T  T+L G  ++   
Sbjct: 899 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 958

Query: 525 LDVMMLLADMIKMGIVPDAV 544
            +   +L  M ++G VP ++
Sbjct: 959 DEASKVLGVMQRLGWVPTSL 978



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 212/460 (46%), Gaps = 29/460 (6%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVF------------------NALNSLE 46
           L  AK  + A+ L+ D+ E   K  KP+   Y  F                  + L+S  
Sbjct: 531 LCRAKKVEEAKMLLVDMGE---KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           +P  N  +++ LI    ++G+  EAL  ++   +  ++P I+A +A+++ L K GK    
Sbjct: 588 VP--NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI-- 161
              + + +  G+V DV  Y  LI   C +GD+ KA  L+DEM+  GI P +V+Y  LI  
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIND 705

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           +G C    + EA  +F  M   G+ P+ Y Y  L+DG  K  ++ +AL  +HE    ++ 
Sbjct: 706 YGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 765

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            ++  F  L+D  CK G++  A   F  M    + PNI  Y  LID + KA  + EA  L
Sbjct: 766 -SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +ME   I P+  TY  L+     +G       L + M   GI  + + Y  +   YCK
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG   +AL + ++   +G++     F +LI   CK   I   + L +EM  + L      
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 944

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
              L+ G  K GN  E  ++   M      P+  +++  I
Sbjct: 945 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 984



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 198/421 (47%), Gaps = 24/421 (5%)

Query: 134 DVMKALNLFDEMIDKGIEPTVV-IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           D ++  N F     K   P  +  Y+IL   LCN   + +A++M   + +    P L   
Sbjct: 99  DSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK-PPLEIL 157

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           ++L+  Y +                     N+  F + +D    +G L  A + F+    
Sbjct: 158 DSLVRCYREFGG-----------------SNLTVFDIFIDKFRVLGFLNEASSVFIASIS 200

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G FP +   N L+    KA  +     +   M + +I PDV+TY  +IK  C VG +  
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            + +L +M KE    N+ TYN+ I G C+ G +++AL V   M EKG+ P+  T++ L+D
Sbjct: 261 GKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD 319

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK      A  ++  M    L P+   +TALIDG  K+GN++E LR+  EM+   +  
Sbjct: 320 GFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKL 379

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +V T +++I G+ K G ++ A++ F E           P+   Y  +I        + KA
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEML----MAGIEPDTWTYNLLIDGYLKSHDMAKA 435

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +L ++M++  L P   TY+ ++ GL  +  +     +L  MI+ G+ P+  +   +++ 
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495

Query: 553 Y 553
           Y
Sbjct: 496 Y 496



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 54/345 (15%)

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM----- 320
           ID   +  N F   S      K      + +Y+IL   LC  G +  A+ +L+K+     
Sbjct: 97  IDDSVRLQNFFHWSS-----SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK 151

Query: 321 ------------YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
                       Y+E   +N+  ++  ID +   G + +A SV      +G  P ++  +
Sbjct: 152 PPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCN 211

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +L+    KA  +     +Y  MV   +VPDV  +T +I    K G++ +   +  EM E 
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EK 270

Query: 429 KITPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDG--------GYC-------- 469
           +  P++FT ++ I GL + G +  AL      +EK    DG        G+C        
Sbjct: 271 ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330

Query: 470 ------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                       +PN   Y A+I     +G I +A ++  +M +  L+ +  TY  M+ G
Sbjct: 331 KLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGG 390

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + +A  M   M L  +M+  GI PD     +++ GY ++ D+  A
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/530 (31%), Positives = 269/530 (50%), Gaps = 14/530 (2%)

Query: 38  VFNALNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI 95
            F  L+  ++  F P  SV++ L  AF + G +++AL ++R I    AI A NA+++G  
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAI-AYNAIIHGHC 237

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           +K   D   EF +EM    +  DV TY +LID  C      KA  +  EM+D+G+ P  V
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            +  ++ GLC   K   A S+   M E    P+  TYN L+ G CK  +V+RA +   E 
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +     P+VVT+ +L DGLCK G +  A      M+  G  PN+  YN LIDG CKA   
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L   +      PDV TY I++ GLC  G+L+ A  +++ M K G   +V+TY +L
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 477

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ++G C+ G +++A  +  +M  K    + + + SL++G CK+     A     + V+  +
Sbjct: 478 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGI 532

Query: 396 --VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              P + V+ AL+DG  K+G + E   ++++M      P++ T + ++ GL K+G++  A
Sbjct: 533 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
             F     +      C P+ V Y  II  L    +  +A ++   M    + PD  TY T
Sbjct: 593 FPFL----ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++    + +R  D + +L +MIK G+ PD V    ++ G  +   L  A+
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 249/476 (52%), Gaps = 11/476 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L++ G  D +   +E M+  G   D  TY ++I   C    + KA  + D+   
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV 188

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G +P V +YTIL    C   ++ +A  +FR++      P+   YNA++ G+C+  D + 
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDG 244

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           ALEF  EM    + P+V T+ +L+DGLCK  +   A      M   GV P+   +N ++D
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG    A SL + M +    P   TYN LI GLC    ++ A+ L+ +    G + 
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVTY+ L DG CK G +++A  +  +M+ KG  PN+VT+++LIDG CKA   + A  L 
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             +V    VPDVV +T ++DGL K+G + + L++ + ML+   TPSV T ++L+ GL + 
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR+  A + F E   K     C+ + + Y +++   C   +  +A K+   +R     P 
Sbjct: 485 GRVDEAHHIFKEMVSKD----CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPY 537

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              Y  ++ G  +  R+ ++  +  DM   G VP+     +++ G  ++G +  AF
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 593



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 254/518 (49%), Gaps = 43/518 (8%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F++++    + G  E A   L V  +    P+    N L++GL K+   D   +  +E 
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G V DVVTY +L D  C +G + +A  L  EM  KG  P +V Y  LI GLC  +K 
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +  S+   G VP++ TY  ++DG CK   +++AL+    ML     P+V+T+  L
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 477

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF--------------------------------PN 258
           M+GLC+ G +  A + F  M                                      P 
Sbjct: 478 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 537

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           I VYN L+DG+CK G L E  ++  +M      P++ TYNI++ GLC  G+++ A   L+
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M+  G + +VV+YN +IDG  K    ++A  V  QM + G+ P+ VT+++L+   CK  
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE-AKITPSVFTV 437
             D A+G+   M+   + PD V +  LI GLS+   + +   L  EML    +  +  T 
Sbjct: 658 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +++I  L K G +  AL       D   G     N V Y   I  LC +G++ +AS L S
Sbjct: 718 NTIIDRLCKEGCLKQALLLM----DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 773

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +M  D LR D  +YTT++ GL +A+++     L  +M+
Sbjct: 774 EM--DTLR-DEVSYTTVIIGLCKAEQLDRASKLAREMV 808



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 259/561 (46%), Gaps = 85/561 (15%)

Query: 50  FNPSVFSTLIIA--FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P V +  I+A    + G I+EA  + +++      P +   N L++GL K  K +  +
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E  E +V  G V DVVTY +++D  C +G + KAL + + M+ +G  P+V+ YT L+ GL
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 165 CNENKMVEAESMFRSM--RECGV------------------------------VPNLYTY 192
           C   ++ EA  +F+ M  ++C                                 P +  Y
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 541

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           NALMDGYCK   ++     + +M      PN+ T+ ++MDGLCK G++  A  F   M  
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P++  YN +IDG  KA    EA  +  +M +  I PD  TYN L+   C   + + 
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGY--------------------------------- 339
           A G+L+ M K G+  + VTYN+LI G                                  
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 721

Query: 340 ---CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              CKEG +++AL +   MT  GVE N VT++  ID  CK G +D A  L +EM     +
Sbjct: 722 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTL 778

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTVSSLIHGLFKNGRISNA 453
            D V +T +I GL K   +    +L +EM+  K   IT   F +  LI    K  R+  A
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL--LIDAFTKTKRLDEA 836

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           L        +     CSP+ + Y  +I  LC   ++ KA +LF +M    +   + +YT 
Sbjct: 837 LTLLGLMVQRG----CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892

Query: 514 MLRGLLRAKRMLDVMMLLADM 534
           ++ GL    R  + + +L +M
Sbjct: 893 LIYGLCGQGRGKEALQVLEEM 913



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 210/429 (48%), Gaps = 8/429 (1%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D   A+  F    D+G + +       +  L          +MF  M + G  P+ YTY+
Sbjct: 105 DPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYH 164

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            ++   C++  +++A     +      +P V  + +L    CK G L+ A   F ++   
Sbjct: 165 LVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS- 223

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
              P+   YN +I GHC+  +   A+    EM + +++PDVFTYNILI GLC   + + A
Sbjct: 224 ---PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKA 280

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L +M   G+  + VT+NS++DG CK G  E+A S+ + M E+   P+  T+++LI G
Sbjct: 281 SEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK  N+D A  L  E V    VPDVV ++ L DGL K G + E   L KEM     TP+
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           + T ++LI GL K  +   A    LE       G+  P+ V Y  I+  LC +G++ KA 
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYE-LLESL--VSSGFV-PDVVTYTIIVDGLCKEGRLDKAL 456

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K+   M      P   TYT ++ GL R  R+ +   +  +M+      DA+    +V GY
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516

Query: 554 QENGDLKSA 562
            ++   K A
Sbjct: 517 CKSSRTKEA 525



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 171/367 (46%), Gaps = 8/367 (2%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++ D   A+ F+        + +  T    +  L + G        F  M   G  P+ +
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +I   C+   + +A ++  + +     P+V  Y IL +  C  G+L+ A  + + +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                  + + YN++I G+C++ D + AL    +M E+ V P+V T++ LIDG CKA   
Sbjct: 222 PS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  +  EMV + + PD V F +++DGL K G  +    L   M E    PS  T ++L
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL K   +  A +   E       G+  P+ V Y+ +   LC  G+I +A +L  +M 
Sbjct: 338 ISGLCKQQNVDRAKDLVDE---FVSSGFV-PDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                P+  TY T++ GL +A +      LL  ++  G VPD V   ++V G  + G L 
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 561 SAFRCSE 567
            A +  E
Sbjct: 454 KALKMVE 460



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 161/380 (42%), Gaps = 72/380 (18%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++ L+  + + G ++E   V+  +     +P I+  N +++GL K GK D  + F E M
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G V DVV+Y ++ID         +A  + D+MI  GI P  V Y  L+   C E + 
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH------------- 217
            +A  + ++M + GV P+  TYN L+ G  +   +  A E  HEML              
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719

Query: 218 -----------------------HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM---- 250
                                  H ++ N VT+ + +D LCK G L  A +    M    
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 779

Query: 251 -----------------------------AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
                                        A  G+      +N LID   K   L EA++L
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M +   SP V TYN++I  LC + +++ A  L  +M   GI+A+ V+Y  LI G C 
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899

Query: 342 EGDMEKALSVCSQMTEKGVE 361
           +G  ++AL V  +M     E
Sbjct: 900 QGRGKEALQVLEEMASSDCE 919



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 39/314 (12%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---K 77
           + + L K+ KP      V + +    IP  +   ++TL+  F +    ++A+ + +   K
Sbjct: 614 IIDGLFKASKPKEA-RQVLDQMIQAGIPP-DAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG-LVADVVTYGVLIDCCCGQGDVM 136
             V P     N L++GL +  +    +E   EM+  G +V+   TY  +ID  C +G + 
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM---------------- 180
           +AL L D M   G+E   V Y I I  LC E ++ EA S+   M                
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGL 791

Query: 181 -------------RECGVVPNL----YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                        RE   V  L    +T+N L+D + K   ++ AL     M+     P+
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+T+ +++  LCK+ ++  A   F  MA  G+  +   Y  LI G C  G   EA+ +  
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911

Query: 284 EMEKFEISPDVFTY 297
           EM   +   D   +
Sbjct: 912 EMASSDCEIDDLKW 925


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 259/478 (54%), Gaps = 6/478 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++   K  +F  V     EM    +  DVVT+ V++D     GDV  A+ L D M+ 
Sbjct: 163 NIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVS 222

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KGI+P +V Y  ++ GL    +  +A  +FR+M  CGV P++ ++N L+ G+C+  ++  
Sbjct: 223 KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEE 282

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL FY EM    + P+VV+F  L+    + GE+  A  +   M +FG+ P+  +Y  +I 
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIG 342

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG + EA+ +  EM  F   PDV TYN L+ GLC   +L  AE LL +M + G+  
Sbjct: 343 GFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ T+ +LI GYC++G++EKAL     ++++ + P++VT+++LIDG C+ G++  A  L+
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M  + + P+ V ++ LID   + G +        EM+   I P++ T +S+I G  ++
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522

Query: 448 GRISNALNFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           G +S    F  + + DK       P+ + Y  +I     +G++ +A  L   M ++N++P
Sbjct: 523 GNVSKGQQFLPKMRHDKV-----MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQP 577

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           D  TY  ++ G      M +   +   M   GI PD      M+ G+   G+ K +F+
Sbjct: 578 DAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQ 635



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 228/400 (57%), Gaps = 8/400 (2%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           VF A+++  +    P V  F+ LI  F   G +EEAL  Y+++    V P + + + L+ 
Sbjct: 251 VFRAMDACGVA---PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIG 307

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
              ++G+ D   E+  EM   GL+ D V Y ++I   C  G +++AL + DEM+  G  P
Sbjct: 308 LFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            VV Y  L++GLC E ++ +AE +   M+E GV P+L T+  L+ GYC+  ++ +AL+F+
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             +    L+P++VT+  L+DG+C+ G+L  A   +  M    +FPN   Y+ LID HC+ 
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G +  A +   EM    I P++ TYN +IKG C  G +   +  L KM  + ++ +++TY
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI GY KEG M +A ++   M  + V+P+ VT++ +I G    GN+  A  +Y +M  
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           + + PD   + ++I+G    GN K++ +L+ EML+  + P
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 206/433 (47%), Gaps = 7/433 (1%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L++   ++     P   ++ +LI       K  EA   FR + +  V       NAL+  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             +    +   + Y  +L  N + N  T  +++   CK  +          M K  VFP+
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +N ++D   +AG++  AM+L   M    I P + TYN ++KGL   G+ + A  + +
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M   G+  +V ++N LI G+C+ G++E+AL    +M  + V P+VV+FS LI    + G
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A     EM    L+PD V++T +I G  + G M E LR+  EM+     P V T +
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +L++GL K  R+S+A     E  ++       P+   +  +I   C DG I KA + F  
Sbjct: 374 TLLNGLCKERRLSDAEELLNEMKERG----VPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    LRPD  TY T++ G+ R   +     L  DM    I P+ V   +++  + E G 
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 559 LKSAFRCSEFLKE 571
           + +AF    FL E
Sbjct: 490 VDNAF---AFLDE 499



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 152/283 (53%), Gaps = 6/283 (2%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           + +T NI++   C   Q    + ++ +M K  +  +VVT+N ++D   + GD+E A+++ 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M  KG++P +VT++S++ G  + G  D A  ++  M    + PDV  F  LI G  + 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF-KNGRISNALNFFLEKTDKTDGGYCSP 471
           G ++E LR YKEM   ++TP V + S LI GLF + G + +A  +  E  +        P
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLI-GLFTRRGEMDHAAEYLREMREFG----LMP 332

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V+Y  +I   C  G +L+A ++  +M +    PD  TY T+L GL + +R+ D   LL
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M + G+ PD      ++ GY  +G+++ A +  + + + R+
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/529 (31%), Positives = 272/529 (51%), Gaps = 27/529 (5%)

Query: 43  NSLEIPKFNPSVFSTLIIAFSEMGHIE--EALWVYR---KIEVLPAIQACNALLNGLIKK 97
           +S  IP  NP +     +   + G++    AL  +    +    P++ + N LL+GL K 
Sbjct: 25  HSSAIPSPNPQI--AFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKI 82

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
             +  V+  Y +M L GL +D  T  +L++C C    + +    F  ++ +G  P +V Y
Sbjct: 83  KHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTY 142

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
             LI GLC E+++ EA  +F  M++ G  P++ TY  L+ G C   ++N AL+ + EML+
Sbjct: 143 NTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLN 202

Query: 218 H------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN----------IFV 261
                  N +PNV+T+ +++DGLCKVG    A   F  M   G+ PN          +  
Sbjct: 203 DISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVT 262

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LID  CK G + EA  L   M +  I PD+ TYN LI+G C VG L  A  L   M 
Sbjct: 263 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 322

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   +V++YN LI+GY K   +E+A+ + ++M   G  PNV+T+ SL+ G   AG +D
Sbjct: 323 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 382

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L++ M    +  +   +   +DGL K+  + E ++L+ E+  +     +  ++ LI
Sbjct: 383 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 442

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G++  A   F    +K       PN V Y  +I   C +GQ+ KA+ L   M +
Sbjct: 443 DGLCKAGKLETAWELF----EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +   PD  TY T++RG   + ++ +V+ LL  M +  + PDA+   ++V
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 228/454 (50%), Gaps = 20/454 (4%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L  C  G      AL+ F  M+     P++  +  L+ GL       +  S++  MR  G
Sbjct: 40  LRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSG 99

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           +  +  T N L++  C V  +      +  +L     PN+VT+  L+ GLC    +  A 
Sbjct: 100 LSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEAT 159

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM----EKFEIS--PDVFTYN 298
             F+ M K G  P++  Y  LI G C  GN+  A+ L  EM     ++EI+  P+V TYN
Sbjct: 160 RLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYN 219

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILAN----------VVTYNSLIDGYCKEGDMEKA 348
           I++ GLC VG+ + A+ L ++M  +G++ N          +VT+N LID  CKEG + +A
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M E G+ P++VT++SLI+G C  G++++A  L+  M  K   PDV+ +  LI+G
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            SK   ++E ++LY EML     P+V T  SL+ G+F  G++ +A   F     K  G  
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLF--SVMKAHG-- 395

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            + N   Y   +  LC +  + +A KLF++++S N + +      ++ GL +A ++    
Sbjct: 396 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 455

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L   +   G  P+ V   +M+ G+   G +  A
Sbjct: 456 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 489



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 204/387 (52%), Gaps = 19/387 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFDSVW 104
            + TLI      G+I  AL ++++         I   P +   N +++GL K G+ D   
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235

Query: 105 EFYEEMVLCGLVA----------DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           + +EEM   G++           D+VT+ VLID  C +G V++A  L   MI+ GI P +
Sbjct: 236 QLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 295

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V Y  LI G C    +  A  +F SM   G  P++ +YN L++GY K   V  A++ Y+E
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 355

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ML    +PNV+T+  L+ G+   G++  A   F  M   G+  N + Y   +DG CK   
Sbjct: 356 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 415

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           LFEAM L +E++      ++   N LI GLC  G+LE A  L +K+  EG   NVVTY  
Sbjct: 416 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 475

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I G+C+EG ++KA  +  +M   G  P+++T+++L+ G  ++  ++  + L   M  K 
Sbjct: 476 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 535

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRL 421
           + PD +  + ++D LSKD   +E L L
Sbjct: 536 VSPDAITCSIVVDMLSKDEKYQECLHL 562



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 220/429 (51%), Gaps = 21/429 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           ++P++  ++TLI        I EA  ++ +++ L   P +     L+ GL   G  +   
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 105 EFYEEMV------LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM----------IDK 148
           + ++EM+            +V+TY +++D  C  G   +A  LF+EM          +D+
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQ 254

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G++P +V + +LI  LC E K++EA+ +   M E G+VP+L TYN+L++G+C V D+N A
Sbjct: 255 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 314

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            E +  M     +P+V+++ VL++G  K  ++  A   +  M   G  PN+  Y+ L+ G
Sbjct: 315 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 374

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
              AG + +A  L S M+   I+ + +TY I + GLC    L  A  L  ++        
Sbjct: 375 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           +   N LIDG CK G +E A  +  +++ +G EPNVVT++ +I G C+ G +D A  L  
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 494

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M      PD++ +  L+ G  +   ++E ++L   M +  ++P   T S ++  L K+ 
Sbjct: 495 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 554

Query: 449 RISNALNFF 457
           +    L+  
Sbjct: 555 KYQECLHLL 563



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 213/421 (50%), Gaps = 20/421 (4%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L+ GL  + +       +  M   G   DVVTYG LI   CG G++  AL L
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196

Query: 142 FDEMIDK------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN------- 188
             EM++         +P V+ Y I++ GLC   +  EA+ +F  M+  G++PN       
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGL 256

Query: 189 ---LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
              + T+N L+D  CK   V  A +    M+   + P++VT+  L++G C VG+L +A  
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            FV M   G  P++  YN LI+G+ K   + EAM L +EM      P+V TY+ L+KG+ 
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+++ A+ L   M   GI  N  TY   +DG CK   + +A+ + +++     +  + 
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 436

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             + LIDG CKAG ++ A  L+ ++  +   P+VV +T +I G  ++G + +   L ++M
Sbjct: 437 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                TP + T ++L+ G +++ ++   +   L +  + D    SP+ +  + ++  L  
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNKLEEVVQ-LLHRMAQKD---VSPDAITCSIVVDMLSK 552

Query: 486 D 486
           D
Sbjct: 553 D 553



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 195/407 (47%), Gaps = 22/407 (5%)

Query: 184 GVVPNLYTYNALMDGYCKVADVN--RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             +P+     A    +CK  +V    AL F+H M+     P++ +F  L+ GL K+    
Sbjct: 27  SAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYS 86

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
              + +  M   G+  +    N L++  C    L E  +  + + +   SP++ TYN LI
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT----- 356
           KGLC   ++  A  L  +M K G   +VVTY +LI G C  G++  AL +  +M      
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISR 206

Query: 357 -EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP----------DVVVFTAL 405
            E   +PNV+T++ ++DG CK G  D A  L+ EM  + ++P          D+V F  L
Sbjct: 207 YEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVL 266

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           ID L K+G + E  +L   M+E+ I P + T +SLI G    G +++A   F+    K  
Sbjct: 267 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG- 325

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C P+ + Y  +I       ++ +A KL+++M     RP+  TY ++L+G+  A ++ 
Sbjct: 326 ---CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 382

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           D   L + M   GI  ++    + + G  +N  L  A +    LK S
Sbjct: 383 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 429


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 163/500 (32%), Positives = 265/500 (53%), Gaps = 7/500 (1%)

Query: 68  IEEALW-VYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           +++AL   YR  +I   P++      L    KK ++ +V     +M L  +  +V +  +
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+C C    V  ++++  +M   GI P  + +  LI+GLCNE K+ EA  +F  M + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             PN+ +Y  +++G CK  + + A++ + +M  +  +PNVVT+  ++D LCK   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
            F   M + G+ PN+F YN ++ G C  G L EA  L  EM   ++ P+  T+ IL+ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A  + + M ++G+  ++ TYN+L+DGYC +  M +A  V   M  KG  P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            +++ LI+G CK+  +D A  L  EM  K+L PD V ++ L+ GL + G  KE L L+KE
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M      P++ T   L+ G  K+G +  AL       +K       PN V Y  +I+ + 
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK----LEPNIVHYTILIEGMF 489

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A +LFS +  D  RPD  TYT M++GLL+     +   L   M   G +P++ 
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 549

Query: 545 INQVMVRGYQENGDLKSAFR 564
              VM++G+ +N D  +A R
Sbjct: 550 SYNVMIQGFLQNQDSSTAIR 569



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 256/484 (52%), Gaps = 9/484 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +V +  N +++ +   +V+S   LI     + H++ ++ V  K+  L   P     NAL+
Sbjct: 111 TVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALI 170

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL  +GK     E + EMV  G   +V++Y  +I+  C  G+   A+++F +M   G +
Sbjct: 171 NGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCK 230

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y+ +I  LC +  + +A      M E G+ PN++TYN+++ G+C +  +N A   
Sbjct: 231 PNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+  ++ PN VTF +L+DGLCK G +  A   F  M + GV P+I  YN L+DG+C 
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCL 350

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  +   M +   +P   +YNILI G C   +++ A+ LL +MY + +  + VT
Sbjct: 351 QRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVT 410

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++L+ G C+ G  ++AL++  +M   G  PN+VT+  L+DG CK G++D A+ L   M 
Sbjct: 411 YSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK 470

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K L P++V +T LI+G+   G ++    L+ ++      P + T + +I GL K G   
Sbjct: 471 EKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSD 530

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F +  D  DG    PN   Y  +IQ    +     A +L  +M       +  T+
Sbjct: 531 EAYDLFRKMED--DGFL--PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586

Query: 512 TTML 515
             +L
Sbjct: 587 QMLL 590



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 206/375 (54%), Gaps = 3/375 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +ST+I +  +   + +A+ ++   +E  + P +   N++++G    G+ +    
Sbjct: 230 KPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATR 289

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EMV   ++ + VT+ +L+D  C +G V +A  +F+ M +KG+EP +  Y  L+ G C
Sbjct: 290 LFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYC 349

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  M EA+ +F  M   G  P  ++YN L++GYCK   ++ A     EM H  L P+ V
Sbjct: 350 LQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTV 409

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  LM GLC++G  + A N F  M  +G  PN+  Y  L+DG CK G+L EA+ L   M
Sbjct: 410 TYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++ ++ P++  Y ILI+G+   G+LE A+ L  K++ +G   ++ TY  +I G  KEG  
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLS 529

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M + G  PN  +++ +I G  +  +   A+ L  EMV K    ++  F  L
Sbjct: 530 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQML 589

Query: 406 IDGLSKDGNMKETLR 420
           +D  S+D  + + +R
Sbjct: 590 LDLESQDEIISQFMR 604



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 200/401 (49%), Gaps = 31/401 (7%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V+ AL  ++ M+  N +P+VV FG  +    K  +     +    M  F V  N++  N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+  C+  ++  ++S+  +M K  I PD  T+N LI GLC  G+++ A  L  +M K G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NV++Y ++I+G CK G+   A+ V  +M + G +PNVVT+S++ID  CK   ++ AM
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
              +EMV + + P+V  + +++ G    G + E  RL+KEM+   + P+  T + L+ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 445 FKNGRISNALNFFLEKTDK-----------TDGGY--------------------CSPNH 473
            K G +S A   F   T+K              GY                    C+P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I   C   ++ +A  L ++M    L PD  TY+T+++GL +  R  + + L  +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           M   G  P+ V   +++ G+ ++G L  A +  + +KE ++
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/633 (28%), Positives = 315/633 (49%), Gaps = 65/633 (10%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L +D+ EN +  +  +      F  L ++  +   + +VF  ++ 
Sbjct: 86  LHILTKFKLYKTAQNLAQDLAENSVDEKGNY-----FFQCLKDTYFMCNSSSAVFDLVVK 140

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLV 116
           + S +  IE+AL +    ++   +P + + NA+L+ +++ +       + Y EM+  G+ 
Sbjct: 141 SCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVS 200

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEM------------------------IDK---- 148
            +V +Y +LI   C  G++   L  F+EM                        ID+    
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKL 260

Query: 149 -------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
                  G+EP ++ Y ++I+GLC   ++ E   +   M   G  P+  TYN L++GYCK
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCK 320

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V + ++AL  + EML + L P+VVT+  L++ +CK G L  A  FF  M   G+ PN   
Sbjct: 321 VGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI+G  + G + EA  +  EM +    P + TYN L+ G C  G++E A GLL+ M 
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+  +VV+Y+++I G+C+  ++++A  + ++M EKGV P+ +T+SSLI G C+   ++
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+ EM+ KSL+PD   +T+LI+G  K+G++ E L L+ EM++    P   T + LI
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY---------------AAIIQALCYD 486
           +GL K  R   A    L    K       PN + Y                A+I+  C  
Sbjct: 561 NGLNKQARTREAKRLLL----KLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMK 616

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A ++F  M   N +P+   Y  ++ G  R   +     L  +M+  G +P  V  
Sbjct: 617 GLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTI 676

Query: 547 QVMVRG-YQENGDLKSAFRCSEFLKESRIGSSE 578
             +V+  Y E  D +      + L+  ++  +E
Sbjct: 677 IALVKALYSEGMDEQLNLVIRDILRSCKLSDAE 709



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 222/425 (52%), Gaps = 20/425 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  + ++G+  +AL ++ ++    + P +    +L+N + K G  +   EF+++M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  + VTY  LI+    +G + +A  ++DEMI  G  PT+V Y  L++G C   +M
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M   G+ P++ +Y+ ++ G+C+  +++RA +   EM+   + P+ +T+  L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC+   L  A + F  M    + P+ F Y  LI+G+CK G+L EA++L  EM K   
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID------------- 337
            PD  TYN+LI GL    +   A+ LL K++ +  + N +TY++LI+             
Sbjct: 550 LPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVAL 609

Query: 338 --GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
             G+C +G M +A  V   M ++  +PN   ++ +I G C+ GN+  A  LY EMV    
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLY-KEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +P  V   AL+  L  +G M E L L  +++L +          +L+    K G I    
Sbjct: 670 IPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVF 728

Query: 455 NFFLE 459
           N   E
Sbjct: 729 NLLTE 733



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 53/366 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI  FS+ G ++EA  ++ ++      P I   NALLNG    G+ +      
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GL  DVV+Y  +I   C   ++ +A  +  EM++KG+ P  + Y+ LI GLC +
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA  +F+ M    ++P+ +TY +L++GYCK  D+N AL  + EM+     P+ VT+
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556

Query: 228 GVLMDGL--------------------------------------------------CKV 237
            VL++GL                                                  C  
Sbjct: 557 NVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMK 616

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M K    PN  VYN +I GHC+ GN+ +A  L  EM  F   P   T 
Sbjct: 617 GLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTI 676

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+K L   G  E    +++ + +   L++     +L+    KEG+++   ++ ++M +
Sbjct: 677 IALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAK 736

Query: 358 KGVEPN 363
            G  P+
Sbjct: 737 DGFLPS 742


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 173/510 (33%), Positives = 265/510 (51%), Gaps = 9/510 (1%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
            PS+  F+TLI   S+ G + EA  +  +I   ++ P +    +L+ G  +    D  + 
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ MV  G   + VTY  LI+  C +G V +AL++ +EMI+KGIEPTV  YT+ I  LC
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 EA  +   M++ G  PN+ TY AL+ G  ++  +  A+  YH+ML   L PN V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++ LC  G    A   F  M   G   N   YN +I G C  G++ +AM L  +M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    P V TYN LI G    G +  A  LL  M + G   +  TYN L+ G+ K G +
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A     +M E G+ PN V++++LIDG  K G +D A+ L   M      P+V  + A+
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+GLSK+    E  ++  +M+E  + P+V T ++LI GL +NGR   A   F +   +  
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK- 613

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C PN   Y+++I  LC +G+  +A  L  +M    L PD  T+T+++ G +   R+ 
Sbjct: 614 ---CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              +LL  M+ MG  P+     V+++G Q+
Sbjct: 671 HAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 275/532 (51%), Gaps = 11/532 (2%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           V + LN +    F  S++S  TL+I  ++   +E A  +Y+++    + P++   N L+N
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L KKGK         ++    L  DV TY  LI   C   ++  A  +FD M+ +G +P
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V Y+ LI+GLCNE ++ EA  M   M E G+ P +YTY   +   C +     A+E  
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M     +PNV T+  L+ GL ++G+L  A   +  M K G+ PN   YN LI+  C  
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G    A+ +   ME      +  TYN +IKGLC  G +E A  L +KM K G L  VVTY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI+GY  +G++  A  +   M E G EP+  T++ L+ G  K G +++A   + EMV 
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             L P+ V +TALIDG SKDG +   L L K M E    P+V + +++I+GL K  R S 
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 453 ALNFFLEKT-DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           A     EK  DK       PN + Y  +I  LC +G+   A K+F DM      P+  TY
Sbjct: 567 A-----EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++++ GL +  +  +  +LL +M + G+ PD V    ++ G+   G +  AF
Sbjct: 622 SSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 223/432 (51%), Gaps = 8/432 (1%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A NL+ +M++ GI+P+++ +  LI+ L  + K+ EAE +   + +  + P+++TY +
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+C+  +++ A   +  M+     PN VT+  L++GLC  G +  A +    M + G
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P ++ Y   I   C   +  EA+ L + M+K    P+V TY  LI GL  +G+LE A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           GL  KM KEG++ N VTYN+LI+  C  G    AL +   M   G   N  T++ +I G 
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G+I+ AM L+ +M+    +P VV +  LI+G    GN+    RL   M E    P  
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC--SPNHVLYAAIIQALCYDGQILKA 492
           +T + L+ G  K G++ +A  +F E  +      C  +PN V Y A+I     DG++  A
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVE------CGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L   M      P+  +Y  ++ GL +  R  +   +   M++ G++P+ +    ++ G
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 553 YQENGDLKSAFR 564
              NG  + AF+
Sbjct: 593 LCRNGRTQFAFK 604



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 194/365 (53%), Gaps = 3/365 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI   S +G +E A+ +Y K+    ++P     NAL+N L   G+F +  + +
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G +A+  TY  +I   C  GD+ KA+ LF++M+  G  PTVV Y  LI+G   +
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +   M+E G  P+ +TYN L+ G+ K   +  A  ++ EM+   L PN V++
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  K G++  A +    M + G  PN+  YN +I+G  K     EA  +C +M +
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P+V TY  LI GLC  G+ + A  +   M K   L N+ TY+SLI G C+EG  ++
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M  KG+ P+ VTF+SLIDG    G ID A  L   MV     P+   ++ L+ 
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696

Query: 408 GLSKD 412
           GL K+
Sbjct: 697 GLQKE 701



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D+   P   I  ++I    NE ++         +   G   +LY+ N L+    K   V 
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   Y +ML+  +QP+++TF  L++ L K G++R A      + ++ + P++F Y  LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            GHC+  NL  A  +   M K    P+  TY+ LI GLC  G+++ A  +L++M ++GI 
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V TY   I   C     E+A+ + ++M ++G  PNV T+++LI G  + G ++ A+GL
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y +M+ + LVP+ V + ALI+ L   G     L+++  M       +  T + +I GL  
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G I  A+  F EK  K       P  V Y  +I      G +  A++L   M+ +   P
Sbjct: 421 GGDIEKAMVLF-EKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  TY  ++ G  +  ++        +M++ G+ P+ V    ++ G+ ++G +  A    
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536

Query: 567 EFLKE 571
           + ++E
Sbjct: 537 KRMEE 541



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 229 VLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           +LM   C+   E+R   +F   ++  G   +++  N L+    K   +  A +L  +M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P + T+N LI  L   G++  AE +L ++++  +  +V TY SLI G+C+  +++ 
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  V  +M ++G +PN VT+S+LI+G C  G +D A+ +  EM+ K + P V  +T  I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L    + +E + L   M +    P+V T ++LI GL + G++  A+  + +   +    
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG--- 368

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y A+I  LC  G+   A K+F  M       +  TY  +++GL     +   
Sbjct: 369 -LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           M+L   M+KMG +P  V    ++ GY   G++ +A R  + +KE+
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 3/227 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+  FS+ G +E A + ++++    + P   +  AL++G  K GK D      + M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +V +Y  +I+    +    +A  + D+M+++G+ P V+ YT LI GLC   + 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M +   +PNLYTY++L+ G C+    + A     EM    L P+ VTF  L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
           +DG   +G +  A      M   G  PN   Y+ L+ G  K   L E
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S+++ ++L+  L K   +  A N + +  +        P+ + +  +I  L   G++ +A
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG----IQPSLLTFNTLINILSKKGKVREA 217

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD-MIKMGIVPDAVINQVMVR 551
             + S +   +L PD  TYT+++ G  R  R LD+   + D M+K G  P++V    ++ 
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCR-NRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 276

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           G    G +  A    E + E  I
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGI 299


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 271/494 (54%), Gaps = 5/494 (1%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           E L   RK  V P +   N L+ GL ++ +     + ++EM    LV  +VTY  LID  
Sbjct: 197 EFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGY 256

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G++  A  + + M +K + P ++ +  L+ GLC   KM EA S+ + M   G +P+ 
Sbjct: 257 CKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDG 316

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           YTY+ L DG  +  D N A+E Y +     ++ N  T  +L++GLCK G++  A      
Sbjct: 317 YTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
             + G+  +  +YN  ++G+C+ G++ +A+     ME F + P+  T+N LI   C + +
Sbjct: 377 FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ AE  ++KM ++G+  +V TYN+LIDGY K    ++   +  QM E GV+PNVV++ S
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI+  CK G I  A  +  +M+ + ++P+  V+  LIDG    G +K+ LR + EM+ ++
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I+P++ T + LI GL K G+++ A +F    T  T  G+ SP+ + Y ++I      G +
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFL---TQITSSGH-SPDVITYNSLISGYANAGNV 612

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            K   L+  M++  ++P   TY  ++ G  +    L V  L  +M++M ++PD V+   M
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL-VEKLYNEMLQMNLLPDRVVYNAM 671

Query: 550 VRGYQENGDLKSAF 563
           +  Y E G+ + A+
Sbjct: 672 IHCYAEIGNTQKAY 685



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 155/451 (34%), Positives = 239/451 (52%), Gaps = 5/451 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLNGL K+GK +   E  ++    GLVAD V Y   ++  C  GD+ KA+   + M   G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P  + +  LI   C+  +M +AE   + M E GV P++ TYN L+DGY K+   +R  
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +   +M    ++PNVV++G L++ LCK G++  A      M   GV PN  VYN LIDG 
Sbjct: 477 QILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G + +A+    EM + EISP + TYN+LI GLC  G+L  AE  L ++   G   +V
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDV 596

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TYNSLI GY   G++ K L +   M   G++P V T+  LI G  K G I+    LY E
Sbjct: 597 ITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNE 655

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+  +L+PD VV+ A+I   ++ GN ++   L++ ML+  I P   T +SLI G F+ G+
Sbjct: 656 MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +SN  +      +       +P    Y  +++  C       A   + +M  +N  P+  
Sbjct: 716 LSNIKDL----VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
               +  GL +  R+ +V ++ ++M   GI+
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMNVKGII 802



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 258/515 (50%), Gaps = 12/515 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  + ++G ++ A  +  +++   V P I   N+LL+GL K  K        +EM
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + G + D  TY +L D      D   A+ L+++  +KGI       +IL++GLC + K+
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE + +   E G+V +   YN  ++GYC++ D+N+A+     M    L+PN +TF  L
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D  C + E+  A  +   MA+ GV P++  YN LIDG+ K         +  +ME+  +
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+V +Y  LI  LC  G++  AE +L+ M   G+L N   YN LIDG C  G ++ AL 
Sbjct: 488 KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M    + P +VT++ LIDG CK G +  A    T++      PDV+ + +LI G +
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYA 607

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG--RISNALNFFLEKTDKTDGGY 468
             GN+ + L LY+ M    I P+V T   LI G  K G   +    N  L+         
Sbjct: 608 NAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN------- 660

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V+Y A+I      G   KA  L   M    + PD  TY +++ G  R  ++ ++ 
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L+ +M    + P A    ++V+G+ +  D   A+
Sbjct: 721 DLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAY 755



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 239/481 (49%), Gaps = 14/481 (2%)

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           + + +F  V + + E+   G   D   Y   I       ++   +   D M  +G+ P V
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            IY +LI GLC E ++ +AE MF  M    +V ++ TYN L+DGYCKV +++ A +    
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRER 271

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG--HCKA 272
           M   ++ PN++TF  L+ GLCK+ +++ A +    M   G  P+ + Y+ L DG   C  
Sbjct: 272 MKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDD 331

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN   AM L  +  +  I  + +T +IL+ GLC  G++E AE +L+K  + G++A+ V Y
Sbjct: 332 GN--GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIY 389

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+ ++GYC+ GDM KA+    +M   G+ PN +TF+SLID  C    +D A     +M  
Sbjct: 390 NTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE 449

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + P V  +  LIDG  K        ++ ++M E  + P+V +  SLI+ L K+G+I  
Sbjct: 450 KGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI-- 507

Query: 453 ALNFFLEKTDKTDGGYCS---PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
                LE         C    PN  +Y  +I   C  G++  A + F +M    + P   
Sbjct: 508 -----LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLV 562

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           TY  ++ GL +  ++ +    L  +   G  PD +    ++ GY   G++       E +
Sbjct: 563 TYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETM 622

Query: 570 K 570
           K
Sbjct: 623 K 623



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 189/379 (49%), Gaps = 6/379 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F++LI  F +M  +++A  WV +  E  V P+++  N L++G  K   FD  ++  
Sbjct: 420 NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQIL 479

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M   G+  +VV+YG LI+C C  G +++A  +  +MI +G+ P   +Y +LI G C  
Sbjct: 480 EQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMV 539

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +A   F  M    + P L TYN L+DG CK   +  A +F  ++      P+V+T+
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-NLFEAMSLCSEME 286
             L+ G    G +      +  M   G+ P +  Y+ LI G  K G  L E   L +EM 
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVE--KLYNEML 657

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  + PD   YN +I     +G  + A  L Q M  +GI  + +TYNSLI G+ +EG + 
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLS 717

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               + + M  K + P   T+  L+ G C   +   A   Y EMV  + +P+  +   L 
Sbjct: 718 NIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELT 777

Query: 407 DGLSKDGNMKETLRLYKEM 425
            GL ++G ++E   +  EM
Sbjct: 778 AGLEQEGRLQEVQVICSEM 796



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%)

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           +YA  IQA      +    +    MR   +RP+   Y  ++ GL R KR+ D   +  +M
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             + +V   V    ++ GY + G+L +AF+  E +KE  +  +
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 172/543 (31%), Positives = 275/543 (50%), Gaps = 38/543 (6%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+   + TLI   S+ G I+ AL + +++E   V P +   +AL++GL K G        
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             ++   G++ D VTY  LID CC  G   +   L  +M+ + ++P    + ILI  LC 
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E +++EA+ +   M + G  P++ TYNALM+GYC   +V+ A E ++ M+   L+P+V+ 
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + VL+DG CK   +  A   F  +    + P I  YN LIDG C +G +     L  EM 
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PDV TYNILI  LC  G++  A G+L  M K+G+  N+VTYN+++DGYC   ++ 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  + ++M + G+EP+++ ++ LI+G CK   +D A+ L+ EM  K+L+PD+  + +LI
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL   G +     L  EM ++  +P V T + L+    K      A++ F +  +    
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP 577

Query: 467 GY------------------------------CSPNHVLYAAIIQALCYDGQILKASKLF 496
            +                              CSPN   Y  +I ALC DG   +A  L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           S M  ++  PD  T+  ++  LL+         L  +MI  G+V   +  ++M   Y+E 
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV--NIEKRLM---YEEG 692

Query: 557 GDL 559
           G+L
Sbjct: 693 GNL 695



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 240/471 (50%), Gaps = 4/471 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     + LL  +++ G + +    + ++   G+   + T+ +LI+C   Q     A +L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++  G +P +V +  +I+G C    + +A    +++   G + + +TY  L++G  K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  AL    EM   ++QPN+V +  L+DGLCK G +  A      + + G+  +   
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LIDG C  G   E   L ++M +  + PD +T+NILI  LC  G++  A+G+L  M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G   ++VTYN+L++GYC   ++ +A  + ++M ++G+EP+V+ ++ LIDG CK   +D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ E+  K+LVP +  + +LIDGL   G +    +L  EM  +   P V T + LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K GRI  AL   +    K       PN V Y A++   C    +  A  +F+ M  
Sbjct: 413 DALCKEGRILEALGVLVMMMKKG----VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L PD   Y  ++ G  + + + + ++L  +M    ++PD      ++ G
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 256/531 (48%), Gaps = 13/531 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALL 91
           S+F  L S  I   +PS+  F+ LI  +    H   A   L    K    P +   N ++
Sbjct: 76  SLFTQLQSKGI---SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTII 132

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NG    G      +F + ++  G + D  TYG LI+     G +  AL+L  EM    ++
Sbjct: 133 NGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ 192

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +V+Y+ LI GLC +  + +A  +   + E G++ +  TYN+L+DG C V       + 
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M+  N+ P+  TF +L+D LCK G +  A      M+K G  P+I  YN L++G+C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
             N+ EA  L + M K  + PDV  YN+LI G C    ++ A  L +++  + ++  + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNSLIDG C  G +     +  +M      P+VVT++ LID  CK G I  A+G+   M+
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K + P++V + A++DG     N+     ++  M+++ + P +   + LI+G  K   + 
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A+  F E   K       P+   Y ++I  LC  G+I    +L  +M      PD  TY
Sbjct: 493 EAIVLFKEMRHKN----LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +L    + +     + L   +++ GI PD   N  +V    +   LK A
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 274/618 (44%), Gaps = 87/618 (14%)

Query: 26  LKSRKPHHVCY--------SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
            + + PH  C         + FN +  +  P    SVF  L+ A   MGH   A+ ++ +
Sbjct: 22  FQPQNPHKNCRFRNVDDAVTCFNRMVRV-FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQ 80

Query: 78  IE--------------------------------------VLPAIQACNALLNGLIKKGK 99
           ++                                        P +   N ++NG    G 
Sbjct: 81  LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
                +F + ++  G + D  TYG LI+     G +  AL+L  EM    ++P +V+Y+ 
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI GLC +  + +A  +   + E G++ +  TYN+L+DG C V       +   +M+  N
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           + P+  TF +L+D LCK G +  A      M+K G  P+I  YN L++G+C   N+ EA 
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320

Query: 280 SLCSEMEKFEISPDVFTYNI-----------------------------------LIKGL 304
            L + M K  + PDV  YN+                                   LI GL
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G++   + LL +M+      +VVTYN LID  CKEG + +AL V   M +KGV+PN+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+++++DG C   N++ A  ++  MV   L PD++ +  LI+G  K   + E + L+KE
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    + P + + +SLI GL   GRI +      E  D       SP+ + Y  ++ A C
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ----SPDVITYNILLDAFC 556

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
                 KA  LF  +  + + PD  T   ++  L + +++      L  ++  G  P+  
Sbjct: 557 KTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615

Query: 545 INQVMVRGYQENGDLKSA 562
              +++    ++G    A
Sbjct: 616 TYTILINALCKDGSFGEA 633



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 199/374 (53%), Gaps = 9/374 (2%)

Query: 28  SRKPHHVCYSVFNAL--NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLP 82
           SR+  H    +FN +    LE    N   ++ LI  + +   ++EA+ +++++    ++P
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLN---YNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            I + N+L++GL   G+   V +  +EM       DVVTY +LID  C +G +++AL + 
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M+ KG++P +V Y  ++ G C  N +  A+ +F  M + G+ P++  YN L++GYCK 
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V+ A+  + EM H NL P++ ++  L+DGLC +G +         M   G  P++  Y
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N L+D  CK     +A+SL  ++ +  I PD +T + ++  LC   +L+ AE  L+ +  
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLM 607

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   NV TY  LI+  CK+G   +A+ + S+M +    P+ +TF  +I    +    D 
Sbjct: 608 HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667

Query: 383 AMGLYTEMVIKSLV 396
           A  L  EM+ + LV
Sbjct: 668 AEKLREEMIARGLV 681


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 167/524 (31%), Positives = 265/524 (50%), Gaps = 33/524 (6%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+   + TLI   S+ G I+ AL + +++E   V P +   +AL++GL K G        
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             ++   G++ D VTY  LID CC  G   +   L  +M+ + ++P    + ILI  LC 
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E +++EA+ +   M + G  P++ TYNALM+GYC   +V+ A E ++ M+   L+P+V+ 
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + VL+DG CK   +  A   F  +    + P I  YN LIDG C +G +     L  EM 
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PDV TYNILI  LC  G++  A G+L  M K+G+  N+VTYN+++DGYC   ++ 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  + ++M + G+EP+++ ++ LI+G CK   +D A+ L+ EM  K+L+PD+  + +LI
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL   G +     L  EM ++  +P V T + L+    K      A++ F +  +    
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP 577

Query: 467 GY------------------------------CSPNHVLYAAIIQALCYDGQILKASKLF 496
            +                              CSPN   Y  +I ALC DG   +A  L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           S M  ++  PD  T+  ++  LL+         L  +MI  G+V
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 240/471 (50%), Gaps = 4/471 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     + LL  +++ G + +    + ++   G+   + T+ +LI+C   Q     A +L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++  G +P +V +  +I+G C    + +A    +++   G + + +TY  L++G  K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  AL    EM   ++QPN+V +  L+DGLCK G +  A      + + G+  +   
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LIDG C  G   E   L ++M +  + PD +T+NILI  LC  G++  A+G+L  M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G   ++VTYN+L++GYC   ++ +A  + ++M ++G+EP+V+ ++ LIDG CK   +D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ E+  K+LVP +  + +LIDGL   G +    +L  EM  +   P V T + LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K GRI  AL   +    K       PN V Y A++   C    +  A  +F+ M  
Sbjct: 413 DALCKEGRILEALGVLVMMMKKG----VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L PD   Y  ++ G  + + + + ++L  +M    ++PD      ++ G
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 256/531 (48%), Gaps = 13/531 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALL 91
           S+F  L S  I   +PS+  F+ LI  +    H   A   L    K    P +   N ++
Sbjct: 76  SLFTQLQSKGI---SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTII 132

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NG    G      +F + ++  G + D  TYG LI+     G +  AL+L  EM    ++
Sbjct: 133 NGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ 192

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +V+Y+ LI GLC +  + +A  +   + E G++ +  TYN+L+DG C V       + 
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M+  N+ P+  TF +L+D LCK G +  A      M+K G  P+I  YN L++G+C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
             N+ EA  L + M K  + PDV  YN+LI G C    ++ A  L +++  + ++  + +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNSLIDG C  G +     +  +M      P+VVT++ LID  CK G I  A+G+   M+
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K + P++V + A++DG     N+     ++  M+++ + P +   + LI+G  K   + 
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A+  F E   K       P+   Y ++I  LC  G+I    +L  +M      PD  TY
Sbjct: 493 EAIVLFKEMRHKN----LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +L    + +     + L   +++ GI PD   N  +V    +   LK A
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMA 598



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 274/618 (44%), Gaps = 87/618 (14%)

Query: 26  LKSRKPHHVCY--------SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
            + + PH  C         + FN +  +  P    SVF  L+ A   MGH   A+ ++ +
Sbjct: 22  FQPQNPHKNCRFRNVDDAVTCFNRMVRV-FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQ 80

Query: 78  IE--------------------------------------VLPAIQACNALLNGLIKKGK 99
           ++                                        P +   N ++NG    G 
Sbjct: 81  LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
                +F + ++  G + D  TYG LI+     G +  AL+L  EM    ++P +V+Y+ 
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI GLC +  + +A  +   + E G++ +  TYN+L+DG C V       +   +M+  N
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           + P+  TF +L+D LCK G +  A      M+K G  P+I  YN L++G+C   N+ EA 
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320

Query: 280 SLCSEMEKFEISPDVFTYNI-----------------------------------LIKGL 304
            L + M K  + PDV  YN+                                   LI GL
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G++   + LL +M+      +VVTYN LID  CKEG + +AL V   M +KGV+PN+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+++++DG C   N++ A  ++  MV   L PD++ +  LI+G  K   + E + L+KE
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    + P + + +SLI GL   GRI +      E  D       SP+ + Y  ++ A C
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ----SPDVITYNILLDAFC 556

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
                 KA  LF  +  + + PD  T   ++  L + +++      L  ++  G  P+  
Sbjct: 557 KTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615

Query: 545 INQVMVRGYQENGDLKSA 562
              +++    ++G    A
Sbjct: 616 TYTILINALCKDGSFGEA 633



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 199/374 (53%), Gaps = 9/374 (2%)

Query: 28  SRKPHHVCYSVFNAL--NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLP 82
           SR+  H    +FN +    LE    N   ++ LI  + +   ++EA+ +++++    ++P
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLN---YNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            I + N+L++GL   G+   V +  +EM       DVVTY +LID  C +G +++AL + 
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M+ KG++P +V Y  ++ G C  N +  A+ +F  M + G+ P++  YN L++GYCK 
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V+ A+  + EM H NL P++ ++  L+DGLC +G +         M   G  P++  Y
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N L+D  CK     +A+SL  ++ +  I PD +T + ++  LC   +L+ AE  L+ +  
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLM 607

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   NV TY  LI+  CK+G   +A+ + S+M +    P+ +TF  +I    +    D 
Sbjct: 608 HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667

Query: 383 AMGLYTEMVIKSLV 396
           A  L  EM+ + LV
Sbjct: 668 AEKLREEMIARGLV 681


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 170/516 (32%), Positives = 278/516 (53%), Gaps = 12/516 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFY 107
           + F+++I+A    G++ EAL +  K E++   +  N     +L+ G   +G  DS    +
Sbjct: 331 ATFTSVIVACVAQGNMVEALRL--KEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 388

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            ++   GL  + VTY VLI+ CC  G++ KA  L+ +M   GI P+V     L+ G    
Sbjct: 389 NKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 448

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               EA  +F    +CGV  N++TYN +M   CK   ++ A      M++  + PNVV++
Sbjct: 449 PLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ G C+ G +  A + F  M    + PN+  Y+ LIDG+ K G+  +A+ L  +M  
Sbjct: 508 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P  FT+N +I GLC VGQ+  A   L+   +EG + + +TYNS++DG+ KEG+++ 
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+V  +M E GV PNVVT++SLI+G CK+  ID A+    EM  K L  DV  ++ALID
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K  +M+    L+ E+LE  ++P+    +S+I G      +  AL ++  K    D  
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY--KKMINDRI 745

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C      Y  +I  L  +G+++ AS L+ +M S  + PD  T+  ++ GL    ++ + 
Sbjct: 746 PCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 803

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +L +M +  + P  +I   ++ GY   G+LK AF
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 839



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 265/478 (55%), Gaps = 8/478 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI      G+IE+A  +Y +++   + P++   N+LL G +K   ++   + +
Sbjct: 399 NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLF 458

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E V CG VA++ TY +++   C  G + +A +L D M+++G+ P VV Y  +I G C +
Sbjct: 459 DEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRK 517

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A S+F  M    + PN+ TY+ L+DG  K  D  +AL+ + +ML  N+ P   TF
Sbjct: 518 GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF 577

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GLCKVG++  A +   +  + G  P+   YN ++DG  K GN+  A+++  EM +
Sbjct: 578 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 637

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           F +SP+V TY  LI G C   +++ A     +M ++G+  +V  Y++LIDG+CK  DME 
Sbjct: 638 FGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMES 697

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  ++ E G+ PN + ++S+I G     N++AA+  Y +M+   +  D+  +T LID
Sbjct: 698 AQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLID 757

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+G +     LY EML   I P + T   L++GL   G++ NA    LE+ D+ +  
Sbjct: 758 GLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK-ILEEMDRKN-- 814

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
             +P+ ++Y  +I     +G + +A  L  +M    L PD+ TY  ++ G  +  R L
Sbjct: 815 -MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 871



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 261/511 (51%), Gaps = 12/511 (2%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            ++E  WV  +      I AC       + +G         EEM+ CG   ++V    L+
Sbjct: 320 EMKERGWVPSEATFTSVIVAC-------VAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C QG++  ALNLF+++ + G+ P  V Y++LI G CN   + +A  ++  M+  G+ 
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+++  N+L+ GY K      A + + E +   +  N+ T+ ++M  LCK G++  A + 
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 491

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
             +M   G+ PN+  YN +I GHC+ GN+  A S+ S+M   ++ P+V TY+ILI G   
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G  E A  L  +M    I     T+N++I+G CK G M +A        E+G  P+ +T
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++S++DG  K GNID+A+ +Y EM    + P+VV +T+LI+G  K   +   L+   EM 
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E  +   V   S+LI G  K   + +A + F E  +       SPN ++Y ++I      
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG----LSPNRIVYNSMISGFRDL 727

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
             +  A   +  M +D +  D  TYTT++ GLL+  R++    L  +M+  GIVPD +  
Sbjct: 728 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITF 787

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            V+V G    G L++A +  E +    +  S
Sbjct: 788 HVLVNGLCNKGQLENARKILEEMDRKNMTPS 818



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 277/558 (49%), Gaps = 41/558 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+ L+ A+     IE A+  +  +   +V+P +   N LL  L+++     + + Y +M
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           VL G+  D  T  V++  C  +G V +A   F E  ++G++     Y+I+I  +C +   
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                +   M+E G VP+  T+ +++       ++  AL    EM++     N+V    L
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M G C  G L +A N F  + + G+FPN   Y+ LI+G C +GN+ +A  L ++M+   I
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431

Query: 291 SP----------------------------------DVFTYNILIKGLCGVGQLEGAEGL 316
            P                                  ++FTYNI++  LC  G+++ A  L
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSL 491

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M  +G++ NVV+YN +I G+C++G+M+ A SV S M  + ++PNVVT+S LIDG  K
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+ + A+ L+ +M+  ++ P    F  +I+GL K G M E     K  LE    PS  T
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S++ G  K G I +AL  + E  +       SPN V Y ++I   C   +I  A K  
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFG----VSPNVVTYTSLINGFCKSNRIDLALKTR 667

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +MR   L  D   Y+ ++ G  + + M     L  +++++G+ P+ ++   M+ G+++ 
Sbjct: 668 DEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDL 727

Query: 557 GDLKSAFRCSEFLKESRI 574
            ++++A    + +   RI
Sbjct: 728 NNMEAALVWYKKMINDRI 745



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 137/350 (39%), Gaps = 75/350 (21%)

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           C++   FE+   VF Y  L+       ++E A      M  + ++  V   N L+    +
Sbjct: 180 CAKRFDFELDHRVFNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVR 237

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              + +   + ++M  +G+  +  T   ++    K G ++ A   + E   + +  D   
Sbjct: 238 RNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 297

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT------------------------- 436
           ++ +I  + K  N    L L +EM E    PS  T                         
Sbjct: 298 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 437 ----------VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
                      +SL+ G    G + +ALN F + T+  DG +  PN V Y+ +I+  C  
Sbjct: 358 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE--DGLF--PNKVTYSVLIEGCCNS 413

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR------AKRMLD-------------- 526
           G I KAS+L++ M+ + + P      ++LRG L+      A ++ D              
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 473

Query: 527 VMM--------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +MM              LL +M+  G+VP+ V    M+ G+   G++  A
Sbjct: 474 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 523


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 167/508 (32%), Positives = 276/508 (54%), Gaps = 20/508 (3%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++ +I + N LL GL K   +  V+  Y++M L GL  D++T  +LI+C C    + + L
Sbjct: 87  MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGL 146

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
                ++ +G  P VV +T LI GLC E++++EA  +F  M++ G  PN+ TY  L+ G 
Sbjct: 147 AAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGL 206

Query: 200 CKVADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           C + ++N AL+++ EML+       N +PNV+++ +++DGLCKVG    A   F  M   
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQ 266

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV PN+  ++ LID  CK G + +A  L   M +  I P++FTY  LIKG C VG L  A
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + L   M  +G   +V++YN LI+GYCK   +E+A+ + ++M   G+ P+V T   L+  
Sbjct: 327 KELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              AG +D A  L+  +   ++  D+ +    +DGL K+G + E ++L+ E+    +   
Sbjct: 387 LFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           + T   LI GL K G++  A   F    +K       P+ + Y+++I   C  GQ+ KA+
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELF----EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKAN 502

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD----AVINQVM 549
            LF  M  +   PD  TY+ ++RG   + ++  V+ LL  MI+  + PD    A++  ++
Sbjct: 503 ILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMV 562

Query: 550 VRG--YQENGDLKSAFRCSEFLKESRIG 575
            +   Y+E  DL   F    F+++ R G
Sbjct: 563 CKDEKYKEWLDLLQRF----FVQKHRNG 586



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 214/388 (55%), Gaps = 9/388 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---------EVLPAIQACNALLNGLIKKGKFD 101
           N   + TLI     +G+I  AL  ++++            P + + + +++GL K G ++
Sbjct: 195 NVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWE 254

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                + EMV  G+  +VVT+ VLID  C +G V+KA  L + MI  GI P +  YT LI
Sbjct: 255 EAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLI 314

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    +  A+ +F SM   G  P++ +YN L++GYCK   V  A++ ++EMLH  + 
Sbjct: 315 KGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMW 374

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V T GVL+  L   G++  A   F  +  + +  ++ +    +DG CK G +FEAM L
Sbjct: 375 PDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKL 434

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            +E+E + +  D+ T+  LI GLC  G+LE A  L +K+Y+EGI  + + Y+S+I G+CK
Sbjct: 435 FNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCK 494

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           +G ++KA  +  +M E G  P+++T+S L+ G  ++  ++  + L   M+ K + PD  +
Sbjct: 495 KGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGI 554

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +  + D + KD   KE L L +     K
Sbjct: 555 YAIVEDMVCKDEKYKEWLDLLQRFFVQK 582


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 170/530 (32%), Positives = 271/530 (51%), Gaps = 13/530 (2%)

Query: 51  NPSVFSTLIIA--FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           NP V +  II       G ++EA  ++ K+          A NAL+NGL K    +  ++
Sbjct: 42  NPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYK 101

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             EEM   G   D +TY  ++   C  G V +A   FD M  +G  P VV Y  L+  L 
Sbjct: 102 LLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161

Query: 166 NENKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            E K+ EA  +F++M   +  V P+L TYN L+DG+C+V   + A++ + +++     P+
Sbjct: 162 KEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPD 221

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VT+  ++ GL +   +  A   F  M   G  PN   Y+ ++ GHC+ GN+   + L  
Sbjct: 222 TVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYE 281

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +   SPDV   N +I  LC   +++ A  +L++M K G + +VVTYN L+DG CK  
Sbjct: 282 EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++KA  + S M + G  P++V++S +++G CK   +  A  L+  M+ + LVPDVV F 
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+DGL K G + E   L   M E  + P   T ++L+HGL ++ R   A+  F    +K
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSD-NLRPDNCTYTTMLRGLLRA 521
                  P++++ A     LC +G++ +A   F  M +SD    PD  TYTT++  L+ A
Sbjct: 462 GTVADVLPHNIVLAG----LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEA 517

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            R+   +     M   G  PD V    ++ G ++ G    A R ++ +KE
Sbjct: 518 GRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 242/460 (52%), Gaps = 6/460 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DVVTY  +I   C  G V +AL + +EM +KG+ P V  YTI++  LC   K+ EA
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           + +F  M E G   N   YNAL++G CK  ++ RA +   EM     +P+ +T+  ++ G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL--CSEMEKFEIS 291
           LC++G++  A  FF  M   G  P++  YN L+D   K G + EA  L    +M   +++
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TYN LI G C V + + A  L + +  +G + + VTYNS++ G  ++ +M++A  +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M + G  PN  T+S ++ G C+ GN+   + LY EM  K   PDV++  A+ID L K
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + +  ++ +EM +    P V T + L+ GL K   +  A   F   +   D G C+P
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF---STMVDNG-CAP 360

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y+ ++  LC   ++  A  LF  M    L PD  T+  ++ GL +A ++ +   LL
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M +  ++PD V    ++ G   +     A R  +++ E
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE 460



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 248/461 (53%), Gaps = 11/461 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T++     MG + EA   +  +      P + A N LL+ L K+GK    W  ++ M
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176

Query: 111 VLCG--LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            +    +  D++TY  LID  C      +A+ LF ++I KG  P  V Y  ++ GL  ++
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            M EAE MF+ M + G  PN  TY+ ++ G+C+V ++ R LE Y EM      P+V+   
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++D LCK  ++  A      M+K G  P++  YN L+DG CK   + +A  L S M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
             +PD+ +Y++++ GLC   ++  A  L  +M +  ++ +VVT+N L+DG CK G +++A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M+E  V P+ VT ++L+ G C+    D A+ L+  MV K  V DV+    ++ G
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 409 LSKDGNMKETLRLYKEMLEA--KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           L ++G + + L  +K M+++  + +P V T ++L++ L + GR+  A+++F + T    G
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT----G 532

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             C+P++V Y  ++  L   G+ ++A +L   M+      D
Sbjct: 533 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 246/484 (50%), Gaps = 6/484 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   + +++GL K GK     E  EEM   G+  DV TY +++D  C  G V +A  L
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +MI++G     V Y  LI+GLC +  +  A  +   M   G  P+  TYN ++ G C+
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF--VHMAKFGVFPNI 259
           +  V+ A +F+  M      P+VV +  L+D L K G++  A   F  + MA   V P++
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LIDG C+     EAM L  ++      PD  TYN ++ GL     ++ AE + +K
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G   N  TY+ ++ G+C+ G+M + L +  +MTEK   P+V+  +++ID  CKA  
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A  +  EM     VPDVV +  L+DGL K   + +   L+  M++    P + + S 
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +++GL K  ++ +A   F    D+       P+ V +  ++  LC  G++ +A  L   M
Sbjct: 368 VLNGLCKTNKVHDARVLF----DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              N+ PD  T TT++ GL R KR  + + L   M++ G V D + + +++ G    G L
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483

Query: 560 KSAF 563
             A 
Sbjct: 484 AQAL 487



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 221/432 (51%), Gaps = 6/432 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M +KG EP VV Y+ +I GLC   K+ EA  M   M E GV P++ TY  ++D  C+   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V+ A E +H+M+      N V +  L++GLCK   +  A      MA  G  P+   YN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ--KMYK 322
           ++ G C+ G + EA      M     SPDV  YN L+  L   G++  A GL +   M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
             +  +++TYN+LIDG+C+    ++A+ +   +  KG  P+ VT++S++ G  +  N+D 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  ++ +MV     P+   ++ ++ G  + GNM   L LY+EM E + +P V   +++I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            L K  ++ +A +  LE+  K       P+ V Y  ++  LC    + KA +LFS M  +
Sbjct: 301 MLCKAKKVDDA-HKVLEEMSKIGA---VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              PD  +Y+ +L GL +  ++ D  +L   MI+  +VPD V   +++ G  + G L  A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 563 FRCSEFLKESRI 574
               + + E  +
Sbjct: 417 KDLLDVMSEHNV 428



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 2/216 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I + + +LNGL K  K       ++ M+   LV DVVT+ +L+D  C  G + +A +L
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D M +  + P  V  T L+HGLC + +  EA  +F+ M E G V ++  +N ++ G C+
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479

Query: 202 VADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
              + +AL F+  M+  +    P+VVT+  L++ L + G +  A ++F  M   G  P+ 
Sbjct: 480 EGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDY 539

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             YN L++G  K G   +A  L   M++     D F
Sbjct: 540 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 162/502 (32%), Positives = 269/502 (53%), Gaps = 8/502 (1%)

Query: 67  HIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF-DSVWEFYEEMVLCGLVADVVTY 122
           +I++AL  +  +   + LP I     LL+ ++K G++ D+V    ++M L GL  ++ T 
Sbjct: 77  NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +LI+C      V  A ++  ++I  G++PT+V +T LI+ LC   K  +A  +F  M  
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G  P++YTY  +++G CK+ +   A     +M     QPNVVT+  ++D   K   +  
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNE 256

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A + F +M   G+ P+IF YN LI G C      EA +L +EM    I PD+ T+N+L+ 
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            +C  G++  A+G+L+ M + G+  +VVTY+SL+ GY    ++ +A  +   M  KG +P
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKP 376

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V +++ LI+G CK   ID A  L+ EM+ + L P+ V +  LI GL + G+++E   L+
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           K M      P++FT S L+ G  K G    A   F          Y  PN V+Y  +I A
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLF----RAMQSTYSKPNLVMYNILIDA 492

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +C  G +  A KLFS++    L+P+   YTT++ GL +   + + +    +M + G  PD
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
            +   V++RG+  + D   A +
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQ 574



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 248/476 (52%), Gaps = 9/476 (1%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +V +    +E+   +P+++  S LI  FS +  ++ A  V  KI  L   P I     L+
Sbjct: 116 TVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLI 175

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N L K GKF    E +++MV  G   DV TY  +I+  C  G+   A  L  +M + G +
Sbjct: 176 NWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQ 235

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y+ +I     + ++ EA  +F  M+  G+ P+++TYN+L+ G C  +    A   
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            +EM   N+ P++VTF VL+D +CK G++  A      M + GV P++  Y+ L+ G+  
Sbjct: 296 LNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL 355

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  L   M      PDVF+YNILI G C V +++ A+ L  +M  +G+  N V+
Sbjct: 356 RSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVS 415

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI G C+ G + +A ++   M   G  PN+ T+S L+DG CK G    A  L+  M 
Sbjct: 416 YNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P++V++  LID + K GN+++  +L+ E+    + P+    +++I+GL K G + 
Sbjct: 476 STYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLD 535

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            AL  F  +  + DG  C P+ + Y  II+   +     +A +L  +MR      D
Sbjct: 536 EALEAF--RNMEEDG--CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 238/453 (52%), Gaps = 5/453 (1%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           ++L  +M   G+ P +   +ILI+   +  ++  A S+   + + G+ P + T+  L++ 
Sbjct: 118 ISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINW 177

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CKV    +A+E + +M+    +P+V T+  +++GLCK+GE  AA      M + G  PN
Sbjct: 178 LCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPN 237

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  Y+ +ID H K   + EA+ + S M+   ISPD+FTYN LI+GLC   Q + A  LL 
Sbjct: 238 VVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLN 297

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M    I+ ++VT+N L+D  CKEG + +A  V   MTE GVEP+VVT+SSL+ G     
Sbjct: 298 EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS 357

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L+  M+ K   PDV  +  LI+G  K   + E  +L+ EM+   +TP+  + +
Sbjct: 358 EVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYN 417

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LIHGL + G +  A N F  K   T+G    PN   Y+ ++   C  G   KA +LF  
Sbjct: 418 TLIHGLCQLGSLREARNLF--KNMHTNGNL--PNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M+S   +P+   Y  ++  + ++  + D   L +++   G+ P+A I   ++ G  + G 
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 559 LKSAFRCSEFLKESRIGSSETEGHT-TRSFLGH 590
           L  A      ++E      E   +   R FL H
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHH 566



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 196/352 (55%), Gaps = 3/352 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL--WVYRKIE-VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +ST+I +  +   + EAL  + Y K++ + P I   N+L+ GL    ++       
Sbjct: 237 NVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALL 296

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM    ++ D+VT+ VL+D  C +G V +A  +   M + G+EP VV Y+ L++G    
Sbjct: 297 NEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLR 356

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++VEA  +F +M   G  P++++YN L++GYCKV  ++ A + ++EM+H  L PN V++
Sbjct: 357 SEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSY 416

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC++G LR A N F +M   G  PN+F Y+ L+DG CK G   +A  L   M+ 
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P++  YNILI  +C  G L  A  L  +++ +G+  N   Y ++I+G CKEG +++
Sbjct: 477 TYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDE 536

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           AL     M E G  P+ ++++ +I G     +   A+ L  EM  K  + DV
Sbjct: 537 ALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 196/401 (48%), Gaps = 5/401 (1%)

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV-NRALEFYHEMLHHNLQPN 223
           C+   + +A + F  M     +P +  +  L+    K+    +  +    +M    L PN
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + T  +L++    +  +  A +    + K G+ P I  +  LI+  CK G   +AM L  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M      PDV+TY  +I GLC +G+   A GLL+KM + G   NVVTY+++ID + K+ 
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + +AL + S M  KG+ P++ T++SLI G C       A  L  EM   +++PD+V F 
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+D + K+G + E   + K M E  + P V T SSL++G      +  A   F    D 
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF----DA 368

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C P+   Y  +I   C   +I +A +LF++M    L P+N +Y T++ GL +   
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + +   L  +M   G +P+     +++ G+ + G    AFR
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 180/367 (49%), Gaps = 5/367 (1%)

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL-RAAGNFFVHMAKFGV 255
           D  C   +++ AL  ++ MLH    P ++ F  L+  + K+G+      +    M   G+
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PNI+  + LI+       +  A S+ +++ K  + P + T+  LI  LC VG+   A  
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L   M   G   +V TY ++I+G CK G+   A  +  +M E G +PNVVT+S++ID   
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++ A+ +++ M +K + PD+  + +LI GL      KE   L  EM    I P + 
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + L+  + K G++S A       T+        P+ V Y++++       ++++A KL
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMG----VEPDVVTYSSLMYGYSLRSEVVEARKL 365

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  M +   +PD  +Y  ++ G  + KR+ +   L  +MI  G+ P+ V    ++ G  +
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425

Query: 556 NGDLKSA 562
            G L+ A
Sbjct: 426 LGSLREA 432



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 5/200 (2%)

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET-LRLYKEMLEAKI 430
           D  C   NID A+  +  M+ +  +P ++ FT L+  + K G   +T + L K+M  A +
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           +P+++T+S LI+      R+  A +  L K  K       P  V +  +I  LC  G+  
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSV-LAKIIKLG---LQPTIVTFTTLINWLCKVGKFA 185

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF DM +   RPD  TYTT++ GL +         LL  M + G  P+ V    ++
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245

Query: 551 RGYQENGDLKSAFRCSEFLK 570
             ++++  +  A     ++K
Sbjct: 246 DSHRKDRRVNEALDIFSYMK 265


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 170/516 (32%), Positives = 278/516 (53%), Gaps = 12/516 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFY 107
           + F+++I+A    G++ EAL +  K E++   +  N     +L+ G   +G  DS    +
Sbjct: 291 ATFTSVIVACVAQGNMVEALRL--KEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 348

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            ++   GL  + VTY VLI+ CC  G++ KA  L+ +M   GI P+V     L+ G    
Sbjct: 349 NKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 408

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               EA  +F    +CGV  N++TYN +M   CK   ++ A      M++  + PNVV++
Sbjct: 409 PLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ G C+ G +  A + F  M    + PN+  Y+ LIDG+ K G+  +A+ L  +M  
Sbjct: 468 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P  FT+N +I GLC VGQ+  A   L+   +EG + + +TYNS++DG+ KEG+++ 
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+V  +M E GV PNVVT++SLI+G CK+  ID A+    EM  K L  DV  ++ALID
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K  +M+    L+ E+LE  ++P+    +S+I G      +  AL ++  K    D  
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY--KKMINDRI 705

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C      Y  +I  L  +G+++ AS L+ +M S  + PD  T+  ++ GL    ++ + 
Sbjct: 706 PCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 763

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +L +M +  + P  +I   ++ GY   G+LK AF
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 799



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 265/478 (55%), Gaps = 8/478 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI      G+IE+A  +Y +++   + P++   N+LL G +K   ++   + +
Sbjct: 359 NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLF 418

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E V CG VA++ TY +++   C  G + +A +L D M+++G+ P VV Y  +I G C +
Sbjct: 419 DEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRK 477

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A S+F  M    + PN+ TY+ L+DG  K  D  +AL+ + +ML  N+ P   TF
Sbjct: 478 GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF 537

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GLCKVG++  A +   +  + G  P+   YN ++DG  K GN+  A+++  EM +
Sbjct: 538 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 597

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           F +SP+V TY  LI G C   +++ A     +M ++G+  +V  Y++LIDG+CK  DME 
Sbjct: 598 FGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMES 657

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  ++ E G+ PN + ++S+I G     N++AA+  Y +M+   +  D+  +T LID
Sbjct: 658 AQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLID 717

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+G +     LY EML   I P + T   L++GL   G++ NA    LE+ D+ +  
Sbjct: 718 GLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK-ILEEMDRKN-- 774

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
             +P+ ++Y  +I     +G + +A  L  +M    L PD+ TY  ++ G  +  R L
Sbjct: 775 -MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 831



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 277/558 (49%), Gaps = 41/558 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+ L+ A+     IE A+  +  +   +V+P +   N LL  L+++     + + Y +M
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           VL G+  D  T  V++  C  +G V +A   F E  ++G++     Y+I+I  +C +   
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                +   M+E G VP+  T+ +++       ++  AL    EM++     N+V    L
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M G C  G L +A N F  + + G+FPN   Y+ LI+G C +GN+ +A  L ++M+   I
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 391

Query: 291 SP----------------------------------DVFTYNILIKGLCGVGQLEGAEGL 316
            P                                  ++FTYNI++  LC  G+++ A  L
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSL 451

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M  +G++ NVV+YN +I G+C++G+M+ A SV S M  + ++PNVVT+S LIDG  K
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+ + A+ L+ +M+  ++ P    F  +I+GL K G M E     K  LE    PS  T
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S++ G  K G I +AL  + E  +       SPN V Y ++I   C   +I  A K  
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFG----VSPNVVTYTSLINGFCKSNRIDLALKTR 627

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +MR   L  D   Y+ ++ G  + + M     L  +++++G+ P+ ++   M+ G+++ 
Sbjct: 628 DEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDL 687

Query: 557 GDLKSAFRCSEFLKESRI 574
            ++++A    + +   RI
Sbjct: 688 NNMEAALVWYKKMINDRI 705



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 261/511 (51%), Gaps = 12/511 (2%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            ++E  WV  +      I AC       + +G         EEM+ CG   ++V    L+
Sbjct: 280 EMKERGWVPSEATFTSVIVAC-------VAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C QG++  ALNLF+++ + G+ P  V Y++LI G CN   + +A  ++  M+  G+ 
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+++  N+L+ GY K      A + + E +   +  N+ T+ ++M  LCK G++  A + 
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 451

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
             +M   G+ PN+  YN +I GHC+ GN+  A S+ S+M   ++ P+V TY+ILI G   
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G  E A  L  +M    I     T+N++I+G CK G M +A        E+G  P+ +T
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++S++DG  K GNID+A+ +Y EM    + P+VV +T+LI+G  K   +   L+   EM 
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E  +   V   S+LI G  K   + +A + F E  +       SPN ++Y ++I      
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG----LSPNRIVYNSMISGFRDL 687

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
             +  A   +  M +D +  D  TYTT++ GLL+  R++    L  +M+  GIVPD +  
Sbjct: 688 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITF 747

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            V+V G    G L++A +  E +    +  S
Sbjct: 748 HVLVNGLCNKGQLENARKILEEMDRKNMTPS 778



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 137/350 (39%), Gaps = 75/350 (21%)

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           C++   FE+   VF Y  L+       ++E A      M  + ++  V   N L+    +
Sbjct: 140 CAKRFDFELDHRVFNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVR 197

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              + +   + ++M  +G+  +  T   ++    K G ++ A   + E   + +  D   
Sbjct: 198 RNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 257

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT------------------------- 436
           ++ +I  + K  N    L L +EM E    PS  T                         
Sbjct: 258 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317

Query: 437 ----------VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
                      +SL+ G    G + +ALN F + T+  DG +  PN V Y+ +I+  C  
Sbjct: 318 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE--DGLF--PNKVTYSVLIEGCCNS 373

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR------AKRMLD-------------- 526
           G I KAS+L++ M+ + + P      ++LRG L+      A ++ D              
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 433

Query: 527 VMM--------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +MM              LL +M+  G+VP+ V    M+ G+   G++  A
Sbjct: 434 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 483


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 171/500 (34%), Positives = 264/500 (52%), Gaps = 7/500 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVW 104
           P  N   +++L+ A ++ G  EEA  ++ +++     P + + + L+N L + GK+++  
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   EM   G   ++ TY  L+DC    G   +AL L  EM D G  P V  Y  LI  L
Sbjct: 65  EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++ EA ++F  MRE G VP+ +TYN+L+ G  KV    +A+E   EM  H   P+V
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L+ GL K GE   A   F  M + G  P+   +  L+D   KAG + +A+ L  E
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++  + P V TYN LI G   VG L  A  LL +M + G   +VVTY+ LI G  K   
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A  V  +M ++G  P+ +T+++LI+G  KAG ++ A  L+  M  K   PDVV ++ 
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI  L K   ++    L++EM    I P +FT  S+I  L K G++ +A   F E   K 
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SP+ + Y A + +L   G+  +A K+F DM+   L PD  TY  +L GL + K +
Sbjct: 425 ----LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480

Query: 525 LDVMMLLADMIKMGIVPDAV 544
            D   LL ++I+ G   D++
Sbjct: 481 DDACGLLKELIEQGCAFDSL 500



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 166/526 (31%), Positives = 264/526 (50%), Gaps = 10/526 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++TL+    + G  +EAL +  ++     +P ++  N L++ L K G+    + 
Sbjct: 76  KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFT 135

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM   G V D  TY  LI      G   KA+ L +EM   G  P V+ Y+ LI GL 
Sbjct: 136 LFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLG 195

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + + V+A  +F+ M+  G  P+  T+ ALMD   K   V+ ALE   EM    ++P VV
Sbjct: 196 KDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVV 255

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G  KVG+L  A N    M + G  P++  Y+CLI G  KA  L EA  +  +M
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK    PD  TYN LI GL   G L  A  L  +M  +G   +VVTY++LI    K   +
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A  +  +M   G++P++ T+ S+I    KAG +D A  L++EM  K L PDV+ + A 
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           ++ L + G  KE  +++++M E+ + P V T  +L+ GL K   + +A     E  ++  
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG- 494

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C+ + + +   ++ L   G + +A +L     S  L P   +Y  ++  L +A R+ 
Sbjct: 495 ---CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVS 551

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +    L D+ + G  PD V    ++    + G + +AF   E L+E
Sbjct: 552 EAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF---ELLEE 594



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 233/481 (48%), Gaps = 4/481 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N+LLN L K G+ +     +EE+       DVV+Y  LI+     G    AL +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM  KG +P +  Y  L+  L    +  EA  +   MR+ G VP++ TYN L+    K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A   + EM      P+  T+  L+ GL KVG  + A      M + G  P++  
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G  K G   +A  L  EM++    PD  T+  L+  L   G+++ A  LL +M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G+   VVTYN+LI G+ K GD+ +A ++  +M   G +P+VVT+S LI G  KA  +D
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +  +M  +   PD + +  LI+GL K G + +  RL+  M      P V T S+LI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K  R+ +A   F E     +     P+   Y +II  L   GQ+  A +LFS+MR 
Sbjct: 367 TALGKAARVESACVLFEE----MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L PD  TY   L  L R  R  +   +  DM + G++PD      ++ G  +  ++  
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDD 482

Query: 562 A 562
           A
Sbjct: 483 A 483



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/455 (33%), Positives = 231/455 (50%), Gaps = 4/455 (0%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +VVTY  L++     G   +A  LF+E+      P VV Y+ LI+ L    K   A  + 
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+  G  PNL+TYN L+D   K    + AL    EM  +   P+V T+  L+  L K 
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A   F  M + G  P+ F YN LI G  K G   +AM L  EME+    PDV TY
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           + LI GL   G+   A  L Q+M + G   + +T+ +L+D   K G ++ AL +  +M E
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +GV+P VVT+++LI G  K G++  A  L  EM      PDVV ++ LI GL K   + E
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             ++ K+M +    P   T ++LI+GL K G +++A   F    D+     C+P+ V Y+
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF----DRMKSKGCNPDVVTYS 363

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I AL    ++  A  LF +M S  ++PD  TY +++  L +A ++ D   L ++M   
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           G+ PD +     +      G  K A +  E +KES
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 239/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI    ++G  ++A+ +  ++E     P +   ++L+ GL K G+    ++ ++EM
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D +T+  L+D     G V  AL L DEM ++G++P VV Y  LI G      +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VEA ++   M+  G  P++ TY+ L+ G  K + ++ A +   +M      P+ +T+  L
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GL K G L  AG  F  M   G  P++  Y+ LI    KA  +  A  L  EME   I
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+FTY  +I  L   GQ++ A+ L  +M  +G+  +V+TYN+ ++   + G  ++A  
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M E G+ P+V T+ +L+ G  K   +D A GL  E++ +    D + F   ++ L+
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             GN+ E   L +      + P   + ++LI  L K GR+S A N   +   K  GG   
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDL--KEQGG--K 566

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P+ V Y+++I AL   GQI  A +L  +M    L+    +Y+ ++R L
Sbjct: 567 PDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 4/349 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVVT+  L++ L K G+   A   F  +      P++  Y+CLI+   +AG    A+ +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            +EM+     P+++TYN L+  L   GQ + A  LL +M   G + +V TYN LI    K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G + +A ++ ++M E+G  P+  T++SLI G  K G    AM L  EM      PDV+ 
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +++LI GL KDG   +  +L++EM      P   T ++L+  L K GR+ +AL    E  
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++       P  V Y A+I      G +++A  L  +M+ +  +PD  TY+ ++ GL++A
Sbjct: 247 ERG----VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            ++ +   +L  M K G  PD +    ++ G  + G L  A R  + +K
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 4/273 (1%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+V TYN L+  L   GQ E A+ L +++       +VV+Y+ LI+   + G  E AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V ++M  KG +PN+ T+++L+D   KAG  D A+ L  EM     VPDV  +  LI  L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   L+ EM E    P  FT +SLI+GL K GR   A+   LE+ ++     C 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL-LEEMERHG---CP 181

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y+++I  L  DG+ +KA KLF +M+    +PD+ T+T ++  L +A R+ D + L
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L +M + G+ P  V    ++ G+ + GDL  A+
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%)

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G+ SPN V Y +++ AL   GQ  +A  LF ++++    PD  +Y+ ++  L RA +   
Sbjct: 3   GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + ++A+M   G  P+      +V    + G    A R
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALR 100


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 180/611 (29%), Positives = 293/611 (47%), Gaps = 63/611 (10%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALN-SLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L +DV    L           VF +L  + ++     SVF  ++ 
Sbjct: 87  LHILTRFKLYKTAQTLAEDVAAKTLDDEDAS----LVFRSLQETYDLCNSTSSVFDLVVK 142

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKK-------------------- 97
           ++S +  I++AL +    +    +P + + NA+L+  I+                     
Sbjct: 143 SYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVS 202

Query: 98  ----------------GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
                           G  D    F++ M   G + +VVTY  LID  C    +     L
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M  KG+EP ++ Y ++I+GLC E +M E   +   M + G   +  TYN L+ GYCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             + ++AL  + EML H L P+V+T+  L+  +CK G +  A  F   M   G+ PN   
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+DG  + G + EA  +  EM     SP V TYN LI G C  G++  A  +L+ M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++G+  +VV+Y++++ G+C+  D+++AL V  +M  KG++P+ +T+SSLI G C+     
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+ EM+   L PD   +TALI+    +G++++ ++L+ EM+E  + P V T S LI
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 442 HGLFKNGRISNA----LNFFLEKTDKTDGGYCSPNHVL-----------YAAIIQALCYD 486
           +GL K  R   A    L  F E++  +D  Y    H L             ++I+  C  
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTY----HTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A ++F  M   N +PD   Y  M+ G  R   +     L  +M+K G +   V  
Sbjct: 619 GMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTV 678

Query: 547 QVMVRGYQENG 557
             +V+   + G
Sbjct: 679 IALVKTLHKEG 689



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 215/382 (56%), Gaps = 5/382 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVA-DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
           G +P + +YNA++D   +   +++ A   + EML   + PNV T+ +L+ G C  G L  
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A  FF  M K G  PN+  YN LIDG+CK   + +   L   M    + P++ +YN++I 
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC  G+++    +L +M K G   + VTYN+LI GYCKEG+  +AL + ++M   G+ P
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V+T++SLI   CKAGN++ A     +M ++ L P+   +T L+DG S+ G M E  R+ 
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           KEM++   +PSV T ++LI+G    G++ +A+    +  +K      +P+ V Y+ ++  
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG----LTPDVVSYSTVLSG 459

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C    + +A ++   M +  ++PD  TY+++++G    +R  +   L  +M+++G+ PD
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
                 ++  Y   GDL+ A +
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQ 541



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 207/382 (54%), Gaps = 18/382 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  + + G+  +AL ++ ++    + P++    +L++ + K G  +   EF ++M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  +  TY  L+D    +G + +A  +  EMID G  P+VV Y  LI+G C   KM
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+A ++   M+E G+ P++ +Y+ ++ G+C+  DV+ AL    +M+   ++P+ +T+  L
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C+    + A + F  M + G+ P+ F Y  LI+ +C  G+L +A+ L +EM +  +
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN---------------SL 335
            PDV TY++LI GL    +   A+ LL K++ E  + + VTY+               SL
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G+C +G M +A  V   M EK  +P+   ++ +I G C+ G+I  A  LY EMV    
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671

Query: 396 VPDVVVFTALIDGLSKDGNMKE 417
           +   V   AL+  L K+G + E
Sbjct: 672 LLHTVTVIALVKTLHKEGKVNE 693



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 53/366 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+  FS+ G++ EA  V +++      P++   NAL+NG    GK        
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M   GL  DVV+Y  ++   C   DV +AL +  +M+ KGI+P  + Y+ LI G C +
Sbjct: 439 EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA  +F  M   G+ P+ +TY AL++ YC   D+ +A++ ++EM+   + P+VVT+
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558

Query: 228 GVLMDGL--------------------------------------------------CKV 237
            VL++GL                                                  C  
Sbjct: 559 SVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M +    P+   YN +I GHC+ G++ +A SL  EM K        T 
Sbjct: 619 GMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTV 678

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+K L   G++     ++  + +   L+       L++   +EG+M+  L V ++M +
Sbjct: 679 IALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738

Query: 358 KGVEPN 363
            G  PN
Sbjct: 739 DGFLPN 744



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 152/309 (49%), Gaps = 14/309 (4%)

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN-ILIKGLCGVGQLEGAEGLLQKMYK 322
           CLID         +A+S+    +     P V +YN +L   +     +  AE + ++M +
Sbjct: 148 CLID---------KALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ 198

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
             +  NV TYN LI G+C  G+++ AL    +M +KG  PNVVT+++LIDG CK   ID 
Sbjct: 199 SQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDD 258

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
              L   M +K L P+++ +  +I+GL ++G MKE   +  EM +   +    T ++LI 
Sbjct: 259 GFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIK 318

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  K G    AL    E          SP+ + Y ++I ++C  G + +A++    MR  
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHG----LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L P+  TYTT++ G  +   M +   +L +MI  G  P  V    ++ G+   G +  A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 563 FRCSEFLKE 571
               E +KE
Sbjct: 435 IAVLEDMKE 443


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 163/532 (30%), Positives = 289/532 (54%), Gaps = 21/532 (3%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K  P++  +S +I    +    +EA  ++++++   ++P + +  +L++G  + GK++  
Sbjct: 116 KCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKA 175

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + EM+  G+ +DV T  +LID  C +G V++A  L + MI +G    +V Y+ LI G
Sbjct: 176 KCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 235

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN---- 219
           LC ++++ EA  +F SM++ G  P+   Y  LM G C+  ++N AL+ + EML+      
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 220 --LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
              +P ++++ +++DGLCK      A   F  M   G+ P++  Y  LI G C +G   +
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +EM    I PDV T ++LI  LC  G++  A  LL+ + + G + +VVT  +L+ 
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS--- 394
           G C +  + KA  +  +M + G  PNVVT ++L+ G C++GNI  A+ L+  M+  +   
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 395 ---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P+ + ++ +IDGL K G   E   L+KEM    + P V + +SLIHG  ++G+  
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A   F E  D        P+   ++ +I  LC +G++++A++L   M      P+  TY
Sbjct: 536 DAKYLFNEMVDIG----VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TT+++GL    R+ +   L   M K+G +PD V    +++G  + G++K+A 
Sbjct: 592 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 257/471 (54%), Gaps = 23/471 (4%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K  P++  +S +I    +    +EA  ++++++   ++P + +   L++G    GK++  
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 356

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + EM+  G+  DV T  VLID  C +G V++A  L + +I +G  P VV  T L+ G
Sbjct: 357 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG 416

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH----- 218
           LC ++++ +A  +F  M++ G +PN+ T   LM G C+  ++  ALE +  ML       
Sbjct: 417 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 476

Query: 219 -NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            N +PN +++ +++DGLCK G    A   F  M   GV P++  Y  LI G C++G   +
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 536

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +EM    + PDV T+++LI  LC  G++  A  LL+ M + G + N VTY +L+ 
Sbjct: 537 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 596

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS--- 394
           G C    + +A  +  +M + G  P+VVT+ +L+ G C+ GNI  A+ L+ +M+  +   
Sbjct: 597 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656

Query: 395 ---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                PDV+ ++ +IDGL K G   E   L+KEM    + P+V + +SLIHG  ++G++ 
Sbjct: 657 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 716

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           +A + F E  D+        N V Y+ +I   C +GQI KA  LF  M ++
Sbjct: 717 DAKHLFNEMVDQG----VQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/529 (30%), Positives = 271/529 (51%), Gaps = 21/529 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI        I EA  ++  ++ L   P   A   L+ GL + G  ++  + ++EM
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287

Query: 111 --------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                   + C     +++Y ++ID  C      +A  LF EM  +GI P V+ YT LIH
Sbjct: 288 LNDTGRYGIKCK--PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C   K  +A+ +F  M + G+ P++ T + L+D  CK   V  A +    ++     P
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL- 281
           +VVT   L+ GLC    +  A   F+ M K G  PN+     L+ G C++GN+  A+ L 
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465

Query: 282 ---CSEMEKFEIS--PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
               S+   + I+  P+  +Y+I+I GLC  G+ + A  L ++M   G++ +V++Y SLI
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G+C+ G  + A  + ++M + GV+P+V TFS LID  CK G +  A  L   M+ +  +
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+ V +T L+ GL  +  + E  +L+ +M +    P V T  +L+ GL + G I  AL  
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 457 FLEKTDKTD--GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             +    T   G    P+ + Y+ II  LC  G+  +A +LF +M++  + P+  +YT++
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + G  R+ ++ D   L  +M+  G+  +AV   VM+ G+ + G +  A 
Sbjct: 706 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 246/466 (52%), Gaps = 16/466 (3%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G+  DV T GVLID  C +G V++A  L + M+ +G    +V Y+ LI GLC +++
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ------PN 223
           + EA  +F SM++ G  P+   Y  LM G C+   +N AL  + EML+   Q      P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +V++ +++DGLCK      A   F  M   G+ P++  Y  LI G C++G   +A  L +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    I  DV T ++LI  LC  G++  A  LL+ M + G + ++VTY++LI G C + 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS------LVP 397
            + +A  +   M + G  P+ + + +L+ G C+ GNI+ A+ L+ EM+  +        P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            ++ ++ +IDGL KD    E   L+KEM    I P V + ++LIHG   +G+   A   F
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  D        P+    + +I  LC  G++++A+KL   +      PD  T TT+++G
Sbjct: 361 NEMLDVG----IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG 416

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L    R+     L   M K+G +P+ V    +++G  ++G++K A 
Sbjct: 417 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 462



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 272/536 (50%), Gaps = 27/536 (5%)

Query: 50  FNPSVFST--LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
             P V ++  LI  F + G + EA   L V  +   +  I   + L+ GL  K +     
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK----GIE--PTVVIYT 158
           + +  M   G   D + YG L+   C  G +  AL+L  EM++     GI+  PT+V Y+
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I+I GLC + +  EA  +F+ M+  G++P++ +Y +L+ G+C+     +A   ++EML  
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            ++ +V T  +L+D LCK G++  A      M + G   +I  Y+ LI G C    + EA
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE----GI--LANVVTY 332
             L   M+K    PD   Y  L+KGLC  G +  A  L Q+M  +    GI     +++Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           + +IDG CK+   ++A  +  +M  +G+ P+V+++++LI G C +G  + A  L+ EM+ 
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + PDV   + LID L K G + E  +L + +++    P V T ++L+ GL    RIS 
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD------NLRP 506
           A   FL    K     C PN V  A +++ LC  G I  A +L  +M SD      N +P
Sbjct: 426 ATQLFL----KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  +Y+ ++ GL +  R  +   L  +M  +G++PD +    ++ G+  +G  K A
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 147/281 (52%), Gaps = 10/281 (3%)

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PDV T  +LI   C  G++  A  LL+ M + G + ++VTY++LI G C +  + +A 
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS------LVPDVVVFT 403
            +   M + G  P+ + + +L+ G C+ G I+ A+ L+ EM+  +        P +V ++
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDGL KD    E   L+KEM    + P V + +SLIHG  ++G+   A   F E  D 
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 + + +L    I  LC +G++++A++L   M       D  TY+T+++GL    R
Sbjct: 186 GIRSDVTTSSML----IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + +   L   M K+G  PDA+    +++G  + G++ +A +
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQ 282


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 170/514 (33%), Positives = 277/514 (53%), Gaps = 8/514 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+++I A  + G++ EAL +  ++    V   +     L+ G  K+ K  S  EF+++M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   + VTY VLI+ CC  G++ KA +L+ +M +K I PTV I   LI G       
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F     C +  N++TYN+L+   CK   ++ A   + +ML   L P  V++  +
Sbjct: 436 EEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C+ G L  A + F  M   G+ PN+  Y+ L+DG+ K G+   A  +   M    I
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P  FTYNI I GLC VG+   A+ +L+K  ++G +   +TYNS++DG+ KEG +  AL+
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M E GV PNV+T+++LI+G CK  N D A+ +  EM  K L  D+  + ALIDG  
Sbjct: 615 AYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFC 674

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  +++    L+ E+L+  ++P+    +SLI G      +  ALN  L+K    +G  C 
Sbjct: 675 KKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN--LQKRMLGEGISC- 731

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            +   Y  +I  L  +G+++ A  L+S+M +  + PD   YT ++ GL    ++ +   +
Sbjct: 732 -DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKI 790

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LA+M +  I P+  I   ++ G+ + G+L+ AFR
Sbjct: 791 LAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR 824



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 253/477 (53%), Gaps = 8/477 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   ++ LI    + G++ +A  +Y +++   + P +   N+L+ G +K    +   
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS 439

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + ++E V C  +A++ TY  L+   C +G + +A  L+ +M+DKG+ PT V Y  +I G 
Sbjct: 440 KLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGH 498

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C +  +  A S+F  M +CG+ PN+ TY+ LMDGY K  D   A   +  M+  N+ P+ 
Sbjct: 499 CRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSD 558

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+ + ++GLCKVG    A +      + G  P    YN ++DG  K G++  A++   E
Sbjct: 559 FTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYRE 618

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  +SP+V TY  LI G C     + A  +  +M  +G+  ++  Y +LIDG+CK+ D
Sbjct: 619 MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A  + S++ + G+ PN V ++SLI G     N++AA+ L   M+ + +  D+  +T 
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTT 738

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDGL K+G +   L LY EM    I P +   + LI+GL   G++ NA     E    +
Sbjct: 739 LIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS 798

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                +PN  +Y A+I      G + +A +L ++M    L P++ TY  ++ G ++ 
Sbjct: 799 ----ITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKG 851



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 269/548 (49%), Gaps = 43/548 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ L+ ++ +   + +A+  + ++   +++P I+  N LL  L+K        E YE+M
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 111 VLCGLVADVVT-----------------------------------YGVLIDCCCGQGDV 135
           VL G+  D  T                                   Y ++I   C   DV
Sbjct: 236 VLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDV 295

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  L  +M DKG  P+   +T +I     +  MVEA  +   M  CGV  N+     L
Sbjct: 296 ELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTL 355

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + GYCK   +  ALEF+ +M  +   PN VT+ VL++  CK G +  A + +  M    +
Sbjct: 356 VKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI 415

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +F+ N LI G  K  +  EA  L  E    +I+ ++FTYN L+  LC  G++  A  
Sbjct: 416 CPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATT 474

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L QKM  +G+    V+YNS+I G+C++G+++ A SV S M + G++PNV+T+S L+DG  
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G+ + A  ++  MV +++VP    +   I+GL K G   E   + K+ +E    P   
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +S++ G  K G +S+AL  + E  +       SPN + Y  +I   C +     A K+
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESG----VSPNVITYTTLINGFCKNNNTDLALKM 650

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            ++MR+  L  D   Y  ++ G  + + +     L ++++  G+ P++VI   ++ GY+ 
Sbjct: 651 RNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRN 710

Query: 556 NGDLKSAF 563
             ++++A 
Sbjct: 711 LNNMEAAL 718



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 219/398 (55%), Gaps = 3/398 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++L+    + G + EA  +++K+    + P   + N+++ G  ++G  D     + +M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           + CGL  +V+TY +L+D     GD   A  +FD M+D+ I P+   Y I I+GLC   + 
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ M +   E G VP   TYN++MDG+ K   V+ AL  Y EM    + PNV+T+  L
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK      A      M   G+  +I  Y  LIDG CK  ++  A  L SE+    +
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+   YN LI G   +  +E A  L ++M  EGI  ++ TY +LIDG  KEG +  AL 
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S+M+ KG+ P+++ ++ LI+G C  G ++ A  +  EM   S+ P+V ++ ALI G  
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           K GN++E  RL+ EML+  +TP+  T   LI+G  K G
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 179/334 (53%), Gaps = 3/334 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +S L+  + + G  E A +V+ ++    ++P+    N  +NGL K G+     +
Sbjct: 520 KPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQD 579

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++ V  G V   +TY  ++D    +G V  AL  + EM + G+ P V+ YT LI+G C
Sbjct: 580 MLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             N    A  M   MR  G+  ++  Y AL+DG+CK  D+  A   + E+L   L PN V
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV 699

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+ G   +  + AA N    M   G+  ++  Y  LIDG  K G L  A+ L SEM
Sbjct: 700 IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I PD+  Y +LI GLCG GQLE A+ +L +M ++ I  NV  YN+LI G+ K G++
Sbjct: 760 SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNL 819

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           ++A  + ++M +KG+ PN  T+  LI+G+ K GN
Sbjct: 820 QEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 213/472 (45%), Gaps = 27/472 (5%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK-ALNLFDEMI--DKGIEP 152
           K+  + ++  F +     G V  + +  VL+       + +K A NL +  I  D G  P
Sbjct: 95  KRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMP 154

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
                 IL+       K  + +S  R             YN L++ Y K   +N A+  +
Sbjct: 155 N-----ILVDHFIGSTKRFDFDSDIR------------IYNYLLNSYIKANKLNDAIGCF 197

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           + ++  ++ P +     L+  L K   +  A   +  M   GV  + F  + ++  + K 
Sbjct: 198 NRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKD 257

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
            N  EA     E +   +  D   Y+I+I+  C    +E A GLL+ M  +G + +  T+
Sbjct: 258 NNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTF 317

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            S+I    K+G+M +AL +  +M   GV+ NVV  ++L+ G CK   + +A+  + +M  
Sbjct: 318 TSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNE 377

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               P+ V +  LI+   K+GNM +   LY +M    I P+VF V+SLI G  K      
Sbjct: 378 NGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREE 437

Query: 453 ALNFFLEKTDKTDGGYCS-PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           A   F E         C   N   Y +++  LC +G++ +A+ L+  M    L P   +Y
Sbjct: 438 ASKLFDEAV------ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +M+ G  R   +     + +DM+  G+ P+ +   +++ GY +NGD + AF
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 170/528 (32%), Positives = 271/528 (51%), Gaps = 15/528 (2%)

Query: 63  SEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF-DSVWEFYEEMVLCGLVAD 118
           S   +I++AL  +  +   E LP I     LL+ ++K G++  +V    ++M L GL  D
Sbjct: 70  SSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPD 129

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           + T  +LIDC      V  A ++F +MI  G++P  V +  LI+GLC   K  +A   F 
Sbjct: 130 IYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
                G  P +YTY  +++G CK+ +   A   + +M     QPNVVT+ +L+D LCK  
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDK 249

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A + F +M    + P+IF YN LI G C      EA +L +EM    I P++FT+N
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+  +C  G++  A+G+ + M + G+  +VVTY+SL+ GY    ++ +A  +   M  K
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +P+  +++ LI G CKA  ID A  L+ EM+ + L PD V +  LI GL + G ++E 
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLY 476
             L+K M      P +FT S L+ G  K G +  A   F  ++ T      Y  P+  +Y
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST------YLKPDIAMY 483

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I A+C  G +  A KLFS++    L P+   YTT++  L +   + + +    +M  
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
            G  PD     V++RG+ +    K   R ++ + E R      E  TT
Sbjct: 544 DGCPPDEFSYNVIIRGFLQ---YKDESRAAQLIGEMRDRGFVAEAGTT 588



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 244/481 (50%), Gaps = 9/481 (1%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +V +    +E+   +P ++  S LI  FS +  ++ A  V+ K+  L   P     N L+
Sbjct: 113 AVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLI 172

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL K GKF    EF+++    G    V TY  +I+  C  G+   A  LF +M + G +
Sbjct: 173 NGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQ 232

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y ILI  LC +  + EA  +F  M+   + P+++TYN+L+ G C       A   
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            +EM   N+ PN+ TF VL+D +CK G++  A   F  M + GV P++  Y+ L+ G+  
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL 352

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  L   M      PD F+YNILIKG C   +++ A+ L  +M  +G+  + V 
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN 412

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI G C+ G + +A  +   M   G  P++ T+S L+DG CK G +  A  L+  M 
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L PD+ ++  LID + K GN+K+  +L+ E+    + P+V   +++I+ L K G + 
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL  F       +G  C P+   Y  II+         +A++L  +MR      +  T 
Sbjct: 533 EALEAF----RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTT 588

Query: 512 T 512
           T
Sbjct: 589 T 589


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 273/515 (53%), Gaps = 6/515 (1%)

Query: 51  NPSVFSTLII--AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           +P V S  I+   F   G +++A  ++ ++ V P +   N +++GL K  + D   + ++
Sbjct: 190 SPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +MV  G+  + VTY  +ID  C   +V  A  +F +M+DKG++P+ V Y  +I GLC   
Sbjct: 250 QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQ 309

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            +  AE +F+ M + GV P+  TYN ++DG CK   +++A   + +M+   ++P+ +T+ 
Sbjct: 310 AVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYT 369

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++DGLCK   +  A   F  M   GV PN   YNCLI G+   G   E +    EM   
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH 429

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           ++ PDVFTY +L+  LC  G+   A  L   M ++GI  +V  Y  ++ GY K+G + + 
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + + M   G+ PN   F+++I    K   ID  M ++ +M  + L P+VV +  LID 
Sbjct: 490 HDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K G + + +  + +M+   +TP+    +SL++GL    +       FLE  ++     
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG---- 605

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V +  ++  LC +G++++A +L   M    L+PD  +Y T++ G   A RM + +
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            LL  M+  G+ P+ V    ++ GY + G + +A+
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 261/516 (50%), Gaps = 15/516 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    +   ++ A  V++++    V P     N L++G +  G+++ V +  +EM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  DV TYG+L+D  C  G   +A +LFD MI KGI+P+V IY I++HG   +  +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E   +   M   G+ PN   +N ++  Y K A ++  +  + +M    L PNVVT+G L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK+G +  A   F  M   GV PN  V+N L+ G C      +   L  EM    I
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+  +N ++  LC  G++  A  L+  M   G+  +V++YN+LIDG+C    M++A+ 
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G++PN+V++++L+ G CKAG ID A  L+ EM+ K + P V  +  +++GL 
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF 726

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G   E   LY  M++++   S+ T S ++ G  KN     A   F           CS
Sbjct: 727 RSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIF--------QSLCS 778

Query: 471 PNHVL----YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            +  L    +  +I  L   G+   A  LF+ + ++ L P   TY  +   L+    + +
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  L + M K G  P++ +   ++R   + G++  A
Sbjct: 839 LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 269/547 (49%), Gaps = 46/547 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I    +   ++ A  V++++    V P     N +++GL K    D     +++M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D +TY ++ID  C    V +A  +F +MIDKG++P    Y  LIHG  +  + 
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E     + M    + P+++TY  L+D  CK    N A   +  M+   ++P+V  +G++
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 231 MDGLCKVGELR----------AAG-------------------------NFFVHMAKFGV 255
           + G  K G L           A G                         + F+ M + G+
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y  LID  CK G + +A+   ++M    ++P+   +N L+ GLC V + E  E 
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M  +GI  ++V +N+++   CKEG + +A  +   M   G++P+V+++++LIDG C
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHC 656

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            A  +D A+ L   MV   L P++V +  L+ G  K G +     L++EML   +TP V 
Sbjct: 657 FASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716

Query: 436 TVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           T +++++GLF++GR S A   ++   K+ K     C+     Y+ I+   C +    +A 
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKL-WSICT-----YSIILDGFCKNNCFDEAF 770

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K+F  + S +L+ D  T+  M+ GL +  R  D M L A +   G+VP  V  +++    
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830

Query: 554 QENGDLK 560
            E G L+
Sbjct: 831 IEEGSLE 837



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 249/486 (51%), Gaps = 19/486 (3%)

Query: 83  AIQACNALLNGLIKKGKFDS-----VWEFYEEMVLCG--LVADVVTYGVLIDCCCGQGDV 135
           +++A N LL+ ++ + K  S     V  F   +  C   +  D  TY ++I C C  G +
Sbjct: 42  SVRALNQLLS-VVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRL 100

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSMRECGVVPNLYTYNA 194
                 F  ++  G     ++   L+ GLC+  ++ EA   + R M E G    + +YN 
Sbjct: 101 ELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNT 160

Query: 195 LMDGYCKVADVNRALEFYHEML---HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           L+ G C       A E  H M+     +  P+VV++ ++++G    G++  A + F+ M 
Sbjct: 161 LLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM- 219

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             GV P++  YN +IDG CKA  +  A  +  +M +  + P+  TYN +I GLC   +++
Sbjct: 220 --GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            AEG+ QKM  +G+  + VTYN++IDG CK   +++A  V  QM ++GV+P+ VT++++I
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CKA  ID A G++ +M+ K + PD + +T +IDGL K  ++     ++++M++  + 
Sbjct: 338 DGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T + LIHG    G+        +++  +       P+   Y  ++  LC +G+  +
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEV----VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  LF  M    ++P    Y  ML G  +   + ++  LL  M+  GI P+  I   ++ 
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 552 GYQENG 557
            Y +  
Sbjct: 514 AYAKRA 519



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 200/386 (51%), Gaps = 1/386 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P  +  N ++    K+   D V   + +M   GL  +VVTYG LID  C  G V  A+
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
             F++MI++G+ P  V++  L++GLC  +K  + E +F  M   G+ P++  +N ++   
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V  A      M+   L+P+V+++  L+DG C    +  A      M   G+ PNI
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN L+ G+CKAG +  A  L  EM +  ++P V TYN ++ GL   G+   A  L   
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K   L ++ TY+ ++DG+CK    ++A  +   +    ++ +++TF+ +IDG  K G 
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + AM L+  +    LVP VV +  + + L ++G+++E   L+  M ++   P+   +++
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTD 465
           LI  L   G I  A   +L K D+ +
Sbjct: 861 LIRKLLDRGEIPRA-GAYLSKLDEKN 885



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 215/437 (49%), Gaps = 21/437 (4%)

Query: 138 ALNLFDEMIDKGIEPTV----VIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYT 191
           AL LFDE++      +V     + +++    C+ +  +      R +R+C   V P+  T
Sbjct: 27  ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCT 86

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRAAGNFFV 248
           Y+ ++  +C++  +      +  +L    + + +    L+ GLC   +VGE  A      
Sbjct: 87  YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE--AMHVLLR 144

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM---EKFEISPDVFTYNILIKGLC 305
            M + G    +  YN L+ G C      EA  L   M   +    SPDV +YNI+I G  
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             GQ++ A  L  +M   G+  +VVTYN++IDG CK  ++++A  V  QM EKGV+PN V
Sbjct: 205 NEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++++IDG CKA  +D A G++ +MV K + P  V +  +IDGL K   +     ++++M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++  + P   T +++I GL K   I  A   F +  DK       P+++ Y  II  LC 
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG----VKPDNLTYTIIIDGLCK 377

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
              + +A  +F  M    ++P+N TY  ++ G L   +  +V+  + +M    + PD   
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 546 NQVMVRGYQENGDLKSA 562
             +++    +NG    A
Sbjct: 438 YGLLLDYLCKNGKCNEA 454



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 190/383 (49%), Gaps = 9/383 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + TLI A  ++G +++A+  + ++    V P     N+L+ GL    K++ V E +
Sbjct: 539 NVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELF 598

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+  G+  D+V +  ++   C +G VM+A  L D M+  G++P V+ Y  LI G C  
Sbjct: 599 LEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFA 658

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++M EA  +   M   G+ PN+ +YN L+ GYCK   ++ A   + EML   + P V T+
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GL + G    A   +V+M K     +I  Y+ ++DG CK     EA  +   +  
Sbjct: 719 NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++  D+ T+NI+I GL   G+ E A  L   +   G++ +VVTY  + +   +EG +E+
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
              + S M + G  PN    ++LI      G I  A    +++  K+   +    + LI 
Sbjct: 839 LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898

Query: 408 GLSKD------GNMKETLRLYKE 424
             S++       ++ E  R + E
Sbjct: 899 LFSREEYQQHAKSLPEKCRFFNE 921



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 198/394 (50%), Gaps = 3/394 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +F+T+I A+++   I+E + ++ K++   + P +     L++ L K G+ D     +
Sbjct: 504 NHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQF 563

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G+  + V +  L+   C      K   LF EM+++GI P +V +  ++  LC E
Sbjct: 564 NQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKE 623

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +++EA  +  SM   G+ P++ +YN L+DG+C  + ++ A++    M+   L+PN+V++
Sbjct: 624 GRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSY 683

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G CK G +  A   F  M + GV P +  YN +++G  ++G   EA  L   M K
Sbjct: 684 NTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIK 743

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                 + TY+I++ G C     + A  + Q +    +  +++T+N +IDG  K G  E 
Sbjct: 744 SRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKED 803

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + + +   G+ P+VVT+  + +   + G+++    L++ M      P+  +  ALI 
Sbjct: 804 AMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIR 863

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            L   G +        ++ E   +    T S LI
Sbjct: 864 KLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 193/702 (27%), Positives = 318/702 (45%), Gaps = 142/702 (20%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L+  ++Y   R  +  + + L K +   +V +     +       F+P+VF  ++ 
Sbjct: 108 LVHILSRGRMYDETRAYLNQLVD-LCKFKDRGNVIWD--ELVGVYREFAFSPTVFDMILK 164

Query: 61  AFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            + E G  + AL+V+    K   +P++++CN+LLN L+K G+  +    Y++M+  G+V 
Sbjct: 165 VYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 224

Query: 118 DV-----------------------------------VTYGVLIDCCCGQGDVMKALNLF 142
           DV                                   VTY  LI+     GDV  A  + 
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 284

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCK 201
             M +KG+   VV YT+LI G C + KM EAE + R M+ E  +VP+   Y  L+DGYC+
Sbjct: 285 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 344

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A+    EML   L+ N+     L++G CK GE+  A      M  + + P+ + 
Sbjct: 345 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 404

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG------------- 308
           YN L+DG+C+ G+  EA +LC +M +  I P V TYN L+KGLC VG             
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 309 ----------------------QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                                   EGA  L + +   G   + +T+N++I G CK G M 
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM---------------------- 384
           +A  +  +M + G  P+ +T+ +LIDG CKA N+  A                       
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584

Query: 385 -GLY------------TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            GL+            TEM I+ L P++V + ALIDG  K+G + +    Y EM E  ++
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTD------------KTDGGYCS--------- 470
            ++   S+++ GL++ GRI  A N  ++K              K+D  Y +         
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEA-NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 471 --------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                   PN+++Y   I  LC  G++  A + FS +      PDN TY T++ G   A 
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + +   L  +M++ G+VP+ V    ++ G  ++ ++  A R
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 166/549 (30%), Positives = 262/549 (47%), Gaps = 39/549 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           +   +  LI  +   G I++A+ +  ++  L     +  CN+L+NG  K+G+        
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV   L  D  +Y  L+D  C +G   +A NL D+M+ +GIEPTV+ Y  L+ GLC  
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               +A  ++  M + GV P+   Y+ L+DG  K+ +   A   + ++L      + +TF
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ GLCK+G++  A   F  M   G  P+   Y  LIDG+CKA N+ +A  +   ME+
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ISP +  YN LI GL    +L     LL +M   G+  N+VTY +LIDG+CKEG ++K
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV-----------IKS-- 394
           A S   +MTE G+  N++  S+++ G  + G ID A  L  +MV           +KS  
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 395 -------------------LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                              L+P+ +V+   I GL K G + +  R +  +      P  F
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T  +LIHG    G +  A     E   +       PN V Y A+I  LC    + +A +L
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRG----LVPNIVTYNALINGLCKSENVDRAQRL 806

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +    L P+  TY T++ G  +   M     L   MI+ GI P  V    ++ G  +
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866

Query: 556 NGDLKSAFR 564
           +GD++ + +
Sbjct: 867 HGDIERSMK 875



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 246/509 (48%), Gaps = 10/509 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  +   GH  EA  +  K+    + P +   N LL GL + G FD   + +  M+
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D V Y  L+D      +   A  L+ +++ +G   + + +  +I GLC   KMV
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EAE +F  M++ G  P+  TY  L+DGYCK ++V +A +    M    + P++  +  L+
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL K   L    +    M   G+ PNI  Y  LIDG CK G L +A S   EM +  +S
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            ++   + ++ GL  +G+++ A  L+QKM   G   +   +   +    +   ++K    
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADS 701

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +  +  + PN + ++  I G CK G +D A   ++ + +K  VPD   +  LI G S 
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            GN+ E  RL  EML   + P++ T ++LI+GL K+  +  A   F +   K       P
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG----LFP 817

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y  +I   C  G +  A KL   M  + + P   TY+ ++ GL +   +   M LL
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             MIK G+    +    +V+GY  +G+++
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 211/375 (56%), Gaps = 6/375 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TLI  + +  ++ +A  V   +E   + P+I+  N+L++GL K  +   V +   EM
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  ++VTYG LID  C +G + KA + + EM + G+   ++I + ++ GL    ++
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M + G  P+   +   +    + A + +  +   E     L PN + + + 
Sbjct: 664 DEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA 720

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G++  A  FF  ++  G  P+ F Y  LI G+  AGN+ EA  L  EM +  +
Sbjct: 721 IAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 780

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ TYN LI GLC    ++ A+ L  K++++G+  NVVTYN+LIDGYCK G+M+ A  
Sbjct: 781 VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK 840

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+G+ P+VVT+S+LI+G CK G+I+ +M L  +M+   +   ++ +  L+ G  
Sbjct: 841 LKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYI 900

Query: 411 KDGNMKETLRLYKEM 425
           + G M++  +LY  M
Sbjct: 901 RSGEMQKIHKLYDMM 915



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 225/442 (50%), Gaps = 11/442 (2%)

Query: 141 LFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           ++DE++    +    PTV  + +++     +     A  +F +M +CG +P+L + N+L+
Sbjct: 141 IWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +   K  + + A   Y +M+   + P+V    ++++  CK G++  A  F   M   GV 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI  Y+ LI+G+   G++  A  +   M +  +S +V TY +LIKG C   +++ AE +
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 317 LQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M +E  L  +   Y  LIDGYC+ G ++ A+ +  +M   G++ N+   +SLI+G C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G I  A G+ T MV  +L PD   +  L+DG  ++G+  E   L  +ML+  I P+V 
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL + G   +AL  +     +      +P+ V Y+ ++  L        AS L
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRG----VAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           + D+ +        T+ TM+ GL +  +M++   +   M  +G  PD +  + ++ GY +
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 556 NGDLKSAFRCSEFLKESRIGSS 577
             ++  AF+    ++   I  S
Sbjct: 555 ASNVGQAFKVKGAMEREPISPS 576



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 136/285 (47%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           N  + ST++     +G I+EA  + +K+            L   I+      + +  +E 
Sbjct: 646 NIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDES 705

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L+ + + Y + I   C  G V  A   F  +  KG  P    Y  LIHG      +
Sbjct: 706 CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M   G+VPN+ TYNAL++G CK  +V+RA   +H++    L PNVVT+  L
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG CK+G + AA      M + G+ P++  Y+ LI+G CK G++  +M L ++M K  +
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
              +  Y  L++G    G+++    L   M+   +    +++  +
Sbjct: 886 DSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 182/603 (30%), Positives = 302/603 (50%), Gaps = 55/603 (9%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEI---PKFN--PSVFST 57
           ++LA A+L+ ++R L+      LL      H+  S+ + L+   +   P+ +  PSV  T
Sbjct: 78  HILARARLFPHSRSLLS----RLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDT 133

Query: 58  LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+   ++ G +++A   L   R++ V P  + CN +L  L ++   +  W  +E++    
Sbjct: 134 LLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP--- 190

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              +V T+ ++ID  C +GD+ +A  L   M   G  P VV Y  LI G     ++ E E
Sbjct: 191 -APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   MR CG  P++ TYNAL++ +CK   + RA  ++ EM    +  NVVTF   +D  
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G +R A   F  M   G+ PN   Y CL+DG CKAG L +A+ L +EM +  +  +V
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNV 369

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY +L+ GLC  G++  AE + + M + GI AN + Y +LI G+    + E+ALS+ S+
Sbjct: 370 VTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSE 429

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M +KG+E +V  + +LI G C    +D A  L  +M    L P+ V++T ++D   K   
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             E + L ++M+++   P++ T  +L+ GL K G I  A++ F +  D        PN  
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG----LEPNVQ 545

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML---- 530
            Y A++  LC +G++ KA  L  +M    +  DN   T+++ G L+   + D   L    
Sbjct: 546 AYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605

Query: 531 -------------------------------LADMIKMGIVPDAVINQVMVRGYQENGDL 559
                                          L++MI+ GI PDAV+   ++   Q+ G++
Sbjct: 606 INSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665

Query: 560 KSA 562
           + A
Sbjct: 666 EEA 668



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/492 (31%), Positives = 258/492 (52%), Gaps = 7/492 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           ++P  N   F+ +I    + G + EA  +  +++ +   P +   N+L++G  K G+ + 
Sbjct: 188 QLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           V +   EM  CG   DVVTY  L++C C  G + +A + F EM  +G+   VV ++  + 
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             C    + EA  +F  MR  G+ PN  TY  L+DG CK   ++ AL   +EM+   +  
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+ VL+DGLCK G++  A + F  M + G+  N  +Y  LI GH    N   A+SL 
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           SEM+   +  DV  Y  LI GLC + +L+ A+ LL KM + G+  N V Y +++D   K 
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
               +A+++  +M + G  PN+VT+ +L+DG CKAG+ID A+  + +MV   L P+V  +
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           TAL+DGL K+G + + + L  EM++  ++      +SL+ G  K G + +A   F  K  
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDA---FALKAK 604

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
             + G    +   Y   +   C    I +A ++ S+M  + + PD   Y  ++    +  
Sbjct: 605 MINSGL-QLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLG 663

Query: 523 RMLDVMMLLADM 534
            M +  +L  +M
Sbjct: 664 NMEEAAILQNEM 675



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 21/313 (6%)

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           + L+  L   G L+ A   L ++ +  +  N  T N ++    +E   E A  +  Q+  
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA 191

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
               PNV TF+ +ID  CK G++  A  L   M      PDVV + +LIDG  K G ++E
Sbjct: 192 ----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             +L  EM      P V T ++L++   K GR+  A ++F E   K +G     N V ++
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM--KREG--VMANVVTFS 303

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
             + A C +G + +A KLF+ MR   ++P+  TYT ++ G  +A R+ D ++L  +M++ 
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 538 GIVPDAVINQVMVRGYQENGDLKSA---FRCSEFLKESRIGSSETEGHTTRSFLGHLKPT 594
           G+  + V   V+V G  + G +  A   FR  E     R G    E   T    GH    
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME-----RAGIRANELLYTTLIHGHF--- 415

Query: 595 VYK--EQDLSICS 605
           VYK  E+ LS+ S
Sbjct: 416 VYKNSERALSLLS 428



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 3/243 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + + S++  LI     +  ++EA  +  K++   + P       +++   K  K      
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++M+  G   ++VTY  L+D  C  G + +A++ F++M+D G+EP V  YT L+ GLC
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ +A  +   M + G+  +     +LMDG+ K  ++  A     +M++  LQ ++ 
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +   + G C +  ++ A      M + G+ P+  VYNCLI+   K GN+ EA  L +EM
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 286 EKF 288
           E  
Sbjct: 676 ESL 678


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 181/578 (31%), Positives = 282/578 (48%), Gaps = 63/578 (10%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSL----EIPKFNPSVFST 57
            ++L   KLY+ A  L  D+   L     P     S+F  L+        P  + +VF  
Sbjct: 83  LHILVRFKLYRTAHSLAADLAATL-----PDPTGASLFRHLHDTFHLCSSPFSSSAVFDL 137

Query: 58  LIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGK-----FDSVWEFYEE 109
           ++ + S +G + +AL +     +    P + + NA+L+ L+++       +D     + +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI-------- 161
           MV  G+  +V TY V+I     QGD+ K L    +M  +GI P VV Y  LI        
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 162 ---------------------------HGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
                                      +GLC + +M E   +   MR  G+VP+  TYN 
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++G+CK  ++++ L    EM+   L PNVVT+  L++ +CK G L  A   F  M   G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN   Y  LIDG C+ G + EA  + SEM     SP V TYN L+ G C +G+++ A 
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           G+L+ M + G+  +VV+Y+++I G+C+E ++ KA  +  +M EKGV P+ VT+SSLI G 
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C    +  A  L+ EM+ + L PD V +T+LI+    DG + + LRL+ EM++    P  
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDN 557

Query: 435 FTVSSLIHGLFKNGRISNA----LNFFLEKTDKTDGGY------CSPNHVLYA-AIIQAL 483
            T S LI+GL K  R   A    L  F E++   D  Y      CS N       +++  
Sbjct: 558 VTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGF 617

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           C  G + +A ++F  M   N +P+   Y  M+ G  R 
Sbjct: 618 CMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 233/414 (56%), Gaps = 9/414 (2%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA-----DVNRALE 210
           ++ +++  L     + +A ++       G  P + +YNA++D   + +     D + A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            + +M+ + + PNV T+ V++ G+   G+L     F   M K G+ PN+  YN LID  C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K   + EAM+L   M    ++ ++ +YN +I GLCG G++     L+++M  +G++ + V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+L++G+CKEG++ + L + S+M  KG+ PNVVT+++LI+  CKAGN+  A+ ++ +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            ++ L P+   +T LIDG  + G M E  ++  EM+ +  +PSV T ++L+HG    GR+
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A+       ++       P+ V Y+ +I   C + ++ KA ++  +M    + PD  T
Sbjct: 434 QEAVGILRGMVERG----LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           Y+++++GL   +++++   L  +M++ G+ PD V    ++  Y  +G+L  A R
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 215/438 (49%), Gaps = 21/438 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  F + G++ + L +  ++    + P +     L+N + K G      E +++M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  +  TY  LID  C +G + +A  +  EMI  G  P+VV Y  L+HG C   ++
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M E G+ P++ +Y+ ++ G+C+  ++ +A +   EM+   + P+ VT+  L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   +L  A + F  M + G+ P+   Y  LI+ +C  G L +A+ L  EM +   
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID------------- 337
            PD  TY++LI GL    + + A+ LL K++ E  + + VTYN+LI+             
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 338 --GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
             G+C +G M +A  V   M ++  +PN   ++ +I G  + GN+  A  LY E+   S 
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
               V   AL+  L+++G   E  RL + +L +           L+   FK G +   LN
Sbjct: 674 ACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLN 733

Query: 456 FFLEKTDK---TDGGYCS 470
              E        DGG  S
Sbjct: 734 VLTEMAKDGLLPDGGIHS 751



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 189/366 (51%), Gaps = 11/366 (3%)

Query: 213 HEMLHHNLQP--NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           H+  H    P  +   F +++  L ++G +  A        + G  P +  YN ++D   
Sbjct: 119 HDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALL 178

Query: 271 KAG-----NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           +       +  +A  +  +M +  +SP+V+TYN++I+G+   G LE   G ++KM KEGI
Sbjct: 179 RRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGI 238

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVVTYN+LID  CK+  +++A+++   M   GV  N+++++S+I+G C  G +     
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K LVPD V +  L++G  K+GN+ + L L  EM+   ++P+V T ++LI+ + 
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMC 358

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G +S A+  F    D+       PN   Y  +I   C  G + +A K+ S+M      
Sbjct: 359 KAGNLSRAVEIF----DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFS 414

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P   TY  ++ G     R+ + + +L  M++ G+ PD V    ++ G+    +L  AF+ 
Sbjct: 415 PSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQM 474

Query: 566 SEFLKE 571
            E + E
Sbjct: 475 KEEMVE 480



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 185/400 (46%), Gaps = 18/400 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI    + G++  A+ ++ ++ V    P  +    L++G  +KG  +  ++  
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM++ G    VVTY  L+   C  G V +A+ +   M+++G+ P VV Y+ +I G C E
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A  M   M E GV+P+  TY++L+ G C    +  A + + EM+   L P+ VT+
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++  C  GEL  A      M + G  P+   Y+ LI+G  K      A  L  ++  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 288 FEISPDVFTYNILI---------------KGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
            E  PD  TYN LI               KG C  G +  A+ + + M +     N   Y
Sbjct: 586 EESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIY 645

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N +I G+ + G++ KA ++  ++       + V   +L+    + G  D    L   ++ 
Sbjct: 646 NLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR 705

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
              + D  V   L++   K+GNM   L +  EM +  + P
Sbjct: 706 SCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLP 745



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 173/367 (47%), Gaps = 20/367 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  F + G + EA  V  ++ V    P++   NAL++G    G+        
Sbjct: 381 NERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGIL 440

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  GL  DVV+Y  +I   C + ++ KA  + +EM++KG+ P  V Y+ LI GLC +
Sbjct: 441 RGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQ 500

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+VEA  +FR M   G+ P+  TY +L++ YC   ++++AL  + EM+     P+ VT+
Sbjct: 501 QKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTY 560

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID---------------GHCKA 272
            VL++GL K    + A    + +      P+   YN LI+               G C  
Sbjct: 561 SVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMK 620

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA  +   M +    P+   YN++I G    G +  A  L  ++       + V  
Sbjct: 621 GLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAV 680

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS-LIDGQCKAGNIDAAMGLYTEMV 391
            +L+    +EG M   LS   Q   +    N    +  L++   K GN+DA + + TEM 
Sbjct: 681 IALVKALAREG-MNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739

Query: 392 IKSLVPD 398
              L+PD
Sbjct: 740 KDGLLPD 746


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 272/515 (52%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP VF  L+  + +   + E    +R ++   +  +I ACN+LL GL+K G  D  WE Y
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E+V  G+  +V T  ++I+  C    +    +   +M +KG+ P VV Y  LI+  C +
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  +  SM   G+ P ++TYNA+++G CK     RA     EML   + P+  T+
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+   C+   +  A   F  M   GV P++  ++ LI    K G L +A+    +M+ 
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD   Y ILI G C  G +  A  +  +M ++G + +VVTYN++++G CKE  + +
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++MTE+GV P+  TF++LI+G  K GN++ A+ L+  M+ ++L PDVV +  LID
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   M++   L+ +M+  +I P+  +   LI+G    G +S A   + E  +K   G
Sbjct: 543 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK---G 599

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +     +    I++  C  G  +KA +  S+M    + PD  TY T++ G ++ + M   
Sbjct: 600 F-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L+  M   G++PD +   V++ G+   G ++ A
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 238/458 (51%), Gaps = 7/458 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +   +    + P +   NA++NGL K GK+       +EM
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D  TY +L+  CC   ++M A  +FDEM  +G+ P +V ++ LI  L     +
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   FR M+  G+ P+   Y  L+ G+C+   ++ AL+   EML      +VVT+  +
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK   L  A   F  M + GVFP+ + +  LI+G+ K GN+ +A++L   M +  +
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TYN LI G C   ++E    L   M    I  N ++Y  LI+GYC  G + +A  
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EKG E  ++T ++++ G C+AGN   A    + M++K +VPD + +  LI+G  
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+ NM     L  +M  + + P V T + +++G  + GR+  A    L+  ++      +
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG----VN 706

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           P+   Y ++I        + +A ++  +M      PD+
Sbjct: 707 PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/410 (33%), Positives = 217/410 (52%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L+       K+ E    FR ++  G+  ++   N+L+ G  KV  V+ A E Y E
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   +Q NV T  ++++ LCK  ++    +F   M + GVFP++  YN LI+ +C+ G 
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA  L   M    + P VFTYN +I GLC  G+   A+G+L +M K G+  +  TYN 
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  +M  A  +  +M  +GV P++V+FS+LI    K G +D A+  + +M    
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD V++T LI G  ++G M E L++  EMLE      V T +++++GL K   +S A 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E T++  G +  P+   +  +I     DG + KA  LF  M   NL+PD  TY T+
Sbjct: 485 ELFTEMTER--GVF--PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 540

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M  V  L  DMI   I P+ +   +++ GY   G +  AFR
Sbjct: 541 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 207/414 (50%), Gaps = 24/414 (5%)

Query: 157 YTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           ++ +IH L    ++ +A++ + R +R+ GV               +V  V   +     +
Sbjct: 135 FSAMIHILVRSRRLPDAQAVILRMVRKSGV--------------SRVEIVESLV-----L 175

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
            + N   N + F +L+    +  +LR     F  +   G+  +I   N L+ G  K G +
Sbjct: 176 TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 235

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  +  E+ +  +  +V+T NI+I  LC   ++E  +  L  M ++G+  +VVTYN+L
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+ YC++G +E+A  +   M+ KG++P V T++++I+G CK G    A G+  EM+   +
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD   +  L+    ++ NM +  R++ EM    + P + + S+LI  L KNG +  AL 
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +F    D  + G  +P++V+Y  +I   C +G + +A K+  +M       D  TY T+L
Sbjct: 416 YF---RDMKNAGL-APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            GL + K + +   L  +M + G+ PD      ++ GY ++G++  A    E +
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 8/279 (2%)

Query: 295 FTYNILIKGLCGVGQL-EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +++L++      +L EG E   + +  +G+  ++   NSL+ G  K G ++ A  +  
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 243

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++   GV+ NV T + +I+  CK   I+      ++M  K + PDVV +  LI+   + G
Sbjct: 244 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 303

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++E   L   M    + P VFT +++I+GL K G+   A        D+      SP+ 
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL----DEMLKIGMSPDT 359

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD-VMMLLA 532
             Y  ++   C +  ++ A ++F +M S  + PD  +++ ++ GLL     LD  +    
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFR 418

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           DM   G+ PD VI  +++ G+  NG +  A +  + + E
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 191/702 (27%), Positives = 317/702 (45%), Gaps = 142/702 (20%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L+  ++Y   R  +  + + L K +   +V +     +       F+P+VF  ++ 
Sbjct: 74  LVHILSRGRMYDETRAYLNQLVD-LCKFKDRGNVIWD--ELVGVYREFAFSPTVFDMILK 130

Query: 61  AFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            + E G  + AL+V+    K   +P++++CN+LLN L+K G+  +    Y++M+  G+V 
Sbjct: 131 VYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 190

Query: 118 DV-----------------------------------VTYGVLIDCCCGQGDVMKALNLF 142
           DV                                   VTY  LI+     GDV  A  + 
Sbjct: 191 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 250

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCK 201
             M +KG+   VV YT+LI G C + KM EAE + R M+ E  +VP+   Y  L+DGYC+
Sbjct: 251 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 310

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A+    EML   L+ N+     L++G CK GE+  A      M  + + P+ + 
Sbjct: 311 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 370

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG------------- 308
           YN L+DG+C+ G+  EA +LC +M +  I P V TYN L+KGLC VG             
Sbjct: 371 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430

Query: 309 ----------------------QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                                   EGA  L + +   G   + +T+N++I G CK G M 
Sbjct: 431 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 490

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM---------------------- 384
           +A  +  +M + G  P+ +T+ +LIDG CKA N+  A                       
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550

Query: 385 -GLY------------TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            GL+            TEM I+ L P++V + ALIDG  K+G + +    Y EM E  ++
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 610

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------------------------D 462
            ++   S+++ GL++ GRI  A N  ++K                              D
Sbjct: 611 ANIIICSTMVSGLYRLGRIDEA-NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           ++   +  PN+++Y   I  LC  G++  A + FS +      PDN TY T++ G   A 
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + +   L  +M++ G+VP+ V    ++ G  ++ ++  A R
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 771



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 251/531 (47%), Gaps = 39/531 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           +   +  LI  +   G I++A+ +  ++  L     +  CN+L+NG  K+G+        
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV   L  D  +Y  L+D  C +G   +A NL D+M+ +GIEPTV+ Y  L+ GLC  
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               +A  ++  M + GV P+   Y+ L+DG  K+ +   A   + ++L      + +TF
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ GLCK+G++  A   F  M   G  P+   Y  LIDG+CKA N+ +A  +   ME+
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ISP +  YN LI GL    +L     LL +M   G+  N+VTY +LIDG+CKEG ++K
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV-----------IKS-- 394
           A S   +MTE G+  N++  S+++ G  + G ID A  L  +MV           +KS  
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 656

Query: 395 -------------------LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                              L+P+ +V+   I GL K G + +  R +  +      P  F
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T  +LIHG    G +  A     E   +       PN V Y A+I  LC    + +A +L
Sbjct: 717 TYCTLIHGYSAAGNVDEAFRLRDEMLRRG----LVPNIVTYNALINGLCKSENVDRAQRL 772

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           F  +    L P+  TY T++ G  +   M     L   MI+ GI P    N
Sbjct: 773 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCN 823



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 225/442 (50%), Gaps = 11/442 (2%)

Query: 141 LFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           ++DE++    +    PTV  + +++     +     A  +F +M +CG +P+L + N+L+
Sbjct: 107 IWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 164

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +   K  + + A   Y +M+   + P+V    ++++  CK G++  A  F   M   GV 
Sbjct: 165 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 224

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI  Y+ LI+G+   G++  A  +   M +  +S +V TY +LIKG C   +++ AE +
Sbjct: 225 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 284

Query: 317 LQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M +E  L  +   Y  LIDGYC+ G ++ A+ +  +M   G++ N+   +SLI+G C
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 344

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G I  A G+ T MV  +L PD   +  L+DG  ++G+  E   L  +ML+  I P+V 
Sbjct: 345 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 404

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL + G   +AL  +     +      +P+ V Y+ ++  L        AS L
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRG----VAPDEVGYSTLLDGLFKMENFEGASTL 460

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           + D+ +        T+ TM+ GL +  +M++   +   M  +G  PD +  + ++ GY +
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 556 NGDLKSAFRCSEFLKESRIGSS 577
             ++  AF+    ++   I  S
Sbjct: 521 ASNVGQAFKVKGAMEREPISPS 542


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 187/702 (26%), Positives = 317/702 (45%), Gaps = 142/702 (20%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + ++L+  ++Y   R  +  + + L K +   +V +     +       F+P+VF  ++ 
Sbjct: 108 LVHILSRGRMYDETRAYLNQLVD-LCKFKDRGNVIWD--ELVGVYREFAFSPTVFDMILK 164

Query: 61  AFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            + E G  + AL+V+    K   +P++++CN+LLN L+K G+  +    Y++M+  G+V 
Sbjct: 165 VYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 224

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP------------------------- 152
           DV    ++++  C  G V +A     +M + G+EP                         
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 284

Query: 153 ----------TVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCK 201
                      VV YT+LI G C + KM EAE + R M+ E  +VP+   Y  L+DGYC+
Sbjct: 285 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 344

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A+    EML   L+ N+     L++G CK GE+  A      M  + + P+ + 
Sbjct: 345 TGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYS 404

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG------------- 308
           YN L+DG+C+ G+  EA +LC +M +  I P V TYN L+KGLC VG             
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 309 ----------------------QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                                   EGA  L + +   G   + +T+N++I G CK G M 
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM---------------------- 384
           +A  +  +M + G  P+ +T+ +LIDG CKA N+  A                       
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584

Query: 385 -GLY------------TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            GL+            TEM I+ L P++V + ALIDG  K+G + +    Y EM E  ++
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------------------------D 462
            ++   S+++ GL++ GRI  A N  ++K                              D
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEA-NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           ++   +  PN+++Y   I  LC  G++  A + FS +      PDN TY T++ G   A 
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + +   L  +M++ G+VP+ V    ++ G  ++ ++  A R
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/545 (30%), Positives = 261/545 (47%), Gaps = 39/545 (7%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI  +   G I++A+ +  ++  L     +  CN+L+NG  K+G+          MV
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              L  D  +Y  L+D  C +G   +A NL D+M+ +GIEPTV+ Y  L+ GLC      
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  ++  M + GV P+   Y+ L+DG  K+ +   A   + ++L      + +TF  ++
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLCK+G++  A   F  M   G  P+   Y  LIDG+CKA N+ +A  +   ME+  IS
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXIS 574

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P +  YN LI GL    +L     LL +M   G+  N+VTY +LIDG+CKEG ++KA S 
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV-----------IKS------ 394
             +MTE G+  N++  S+++ G  + G ID A  L  +MV           +KS      
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 395 ---------------LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
                          L+P+ +V+   I GL K G + +  R +  +      P  FT  +
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LIHG    G +  A     E   +       PN V Y A+I  LC    + +A +LF  +
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRG----LVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L P+  TY T++ G  +   M     L   MI+ GI P  V    ++ G  ++GD+
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 560 KSAFR 564
           + + +
Sbjct: 871 ERSMK 875



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 240/501 (47%), Gaps = 10/501 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  +   GH  EA  +  K+    + P +   N LL GL + G FD   + +  M+
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D V Y  L+D      +   A  L+ +++ +G   + + +  +I GLC   KMV
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EAE +F  M++ G  P+  TY  L+DGYCK ++V +A +    M    + P++  +  L+
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL K   L    +    M   G+ PNI  Y  LIDG CK G L +A S   EM +  +S
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            ++   + ++ GL  +G+++ A  L+QKM   G   +   +   +    +   ++K    
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADS 701

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +  +  + PN + ++  I G CK G +D A   ++ + +K  VPD   +  LI G S 
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            GN+ E  RL  EML   + P++ T ++LI+GL K+  +  A   F +   K       P
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG----LFP 817

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y  +I   C  G +  A KL   M  + + P   TY+ ++ GL +   +   M LL
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
             MIK G+    +    +V+G
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQG 898



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 219/427 (51%), Gaps = 35/427 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA---CNALLNGLIKKGKFDSVWEFYEEMV 111
           +STL+    +M + E A  +++ I      ++    N +++GL K GK     E +++M 
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D +TY  LID  C   +V +A  +   M  + I P++ +Y  LI GL    ++V
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV 594

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E   +   M   G+ PN+ TY AL+DG+CK   +++A   Y EM  + L  N++    ++
Sbjct: 595 EXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFP--------------------------------NI 259
            GL ++G +  A      M   G FP                                N 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            VYN  I G CK G + +A    S +      PD FTY  LI G    G ++ A  L  +
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G++ N+VTYN+LI+G CK  ++++A  +  ++ +KG+ PNVVT+++LIDG CK GN
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +DAA  L  +M+ + + P VV ++ALI+GL K G+++ +++L  +M++A +   +    +
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 440 LIHGLFK 446
           L+ G FK
Sbjct: 895 LVQGGFK 901



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 204/367 (55%), Gaps = 6/367 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TLI  + +  ++ +A  V   +E   + P+I+  N+L++GL K  +     +   EM
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  ++VTYG LID  C +G + KA + + EM + G+   ++I + ++ GL    ++
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M + G  P+   +   +    + A + +  +   E     L PN + + + 
Sbjct: 664 DEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA 720

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G++  A  FF  ++  G  P+ F Y  LI G+  AGN+ EA  L  EM +  +
Sbjct: 721 IAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 780

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ TYN LI GLC    ++ A+ L  K++++G+  NVVTYN+LIDGYCK G+M+ A  
Sbjct: 781 VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK 840

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+G+ P+VVT+S+LI+G CK G+I+ +M L  +M+   +   ++ +  L+ G  
Sbjct: 841 LKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGF 900

Query: 411 KDGNMKE 417
           K  N  E
Sbjct: 901 KTSNYNE 907



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 224/442 (50%), Gaps = 11/442 (2%)

Query: 141 LFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           ++DE++    +    PTV  + +++     +     A  +F +M +CG +P+L + N+L+
Sbjct: 141 IWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +   K  + + A   Y +M+   + P+V    ++++  CK G++  A  F   M   GV 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI  Y+ LI+G+   G++  A  +   M +  +S +V TY +LIKG C   +++ AE +
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 317 LQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M +E  L  +   Y  LIDGYC+ G ++ A+ +  +M   G++ N+   +SLI+G C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G I  A G+ T MV  +L PD   +  L+DG  ++G+  E   L  +ML+  I P+V 
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL + G   +AL  +            +P+ V Y+ ++  L        AS L
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXG----VAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           + D+ +        T+ TM+ GL +  +M++   +   M  +G  PD +  + ++ GY +
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 556 NGDLKSAFRCSEFLKESRIGSS 577
             ++  AF+    ++   I  S
Sbjct: 555 ASNVGQAFKVKGAMEREXISPS 576


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 161/540 (29%), Positives = 276/540 (51%), Gaps = 13/540 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +  +  P   PS+  F+ L+I+ ++M H    L +  +++   + P I   N L+
Sbjct: 45  SSFNRMLHMHPP---PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G   ++ T+  LI   C +G + + L+LFD+MI +G +
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    P++  Y +++D  CK   V +A   
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 221

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+H  + P++ T+  L+  LC + E +        M    + PN+ +++ ++D  CK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M K  + P+V TYN L+ G C   +++ A  +   M  +G   +VV+
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++LI+GYCK   +EKA+ +  +M  K + PN VT+S+L+ G C  G +  A+ L+ EMV
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD V +  L+D L K+  + E + L K +  + + P +   + +I G+ + G + 
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 461

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       PN   Y  +I  LC  G + +ASKLF +M+     P+ CTY
Sbjct: 462 AARDLFSNLSSKG----LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLK 570
             + RG LR    L  + LL +M+  G   D   + V+V    ++G  +S  +  SEFL+
Sbjct: 518 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 267/517 (51%), Gaps = 10/517 (1%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHH--VCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           N  L+ +    I D T+ L+   K  H     S+ + ++S  IP  N    + LI +F  
Sbjct: 48  NRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPP-NIYTLNILINSFCH 106

Query: 65  MGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +  +  A  V  KI  L   P I   N L+ GL  +GK   V   +++M+  G   +VVT
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           YG LI+  C  G    A+ L   M     +P VV+YT +I  LC + ++ +A ++F  M 
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G+ P+++TYN+L+   C + +        +EM++  + PNVV F  ++D LCK G++ 
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A +    M K GV PN+  YN L+DGHC    + EA+ +   M     +PDV +Y+ LI
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C + ++E A  L ++M ++ ++ N VTY++L+ G C  G ++ A+++  +M  +G  
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ V++  L+D  CK   +D A+ L   +   ++ PD+ ++T +IDG+ + G ++    L
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  +    + P+V+T + +I+GL + G ++ A   F E   K   GY SPN   Y  I +
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK---GY-SPNGCTYNLITR 522

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               + + L+  +L  +M +     D  T T ++  L
Sbjct: 523 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 211/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ M+     P++  +T L+  +          S+   M   G+ PN+YT N L++
Sbjct: 43  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  +  A     ++L    QPN+ TF  L+ GLC  G++    + F  M   G  P
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 162

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+G CK G+   A+ L   ME+    PDV  Y  +I  LC   Q+  A  L 
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M    + PNVV FS+++D  CK 
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M+ + + P+VV + AL+DG      M E ++++  M+     P V + 
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S+LI+G  K  RI  A+  F E   K       PN V Y+ ++  LC+ G++  A  LF 
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKE----LIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  +Y  +L  L + +R+ + + LL  +    + PD  I  +++ G    G
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458

Query: 558 DLKSA 562
           +L++A
Sbjct: 459 ELEAA 463



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 188/379 (49%), Gaps = 4/379 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N N + +A S F  M      P++  +  L+    K+   +  L   H+M    + PN+ 
Sbjct: 36  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 95

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  +L++  C +  L  A +    + K G  PNI  +N LI G C  G + E + L  +M
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P+V TY  LI GLC VG    A  LL+ M +     +VV Y S+ID  CK+  +
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A ++ S+M  +G+ P++ T++SLI   C          L  EMV   ++P+VV+F+ +
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D L K+G + E   +   M++  + P+V T ++L+ G      +  A+  F     K  
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK-- 333

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G+ +P+ V Y+ +I   C   +I KA  LF +M    L P+  TY+T++ GL    R+ 
Sbjct: 334 -GF-APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 391

Query: 526 DVMMLLADMIKMGIVPDAV 544
           D + L  +M+  G +PD V
Sbjct: 392 DAIALFHEMVTRGQIPDFV 410


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 166/538 (30%), Positives = 279/538 (51%), Gaps = 26/538 (4%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           IP  N   ++ LI    + G +E+A  + + +  L   P  +    L+ G  ++      
Sbjct: 76  IP-INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 134

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            E  +EM    LV   V+YG +I+  C   D+  A  L ++M   G++P VV+Y+ LI G
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             +E ++ EA  +   M   GV P+++ YNA++    K   +  A  +  E+    L+P+
Sbjct: 195 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 254

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VTFG  + G  K G++  A  +F  M   G+ PN  +Y  LI+GH KAGNL EA+S+  
Sbjct: 255 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 314

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +    + PDV T +  I GL   G+++ A  +  ++ ++G++ +V TY+SLI G+CK+G
Sbjct: 315 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 374

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++EKA  +  +M  KG+ PN+  +++L+DG CK+G+I  A  L+  M  K L PD V ++
Sbjct: 375 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYS 434

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDG  K  N+ E   L+ EM    + P  F  ++L+HG  K G +  A+N F E   K
Sbjct: 435 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 494

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              G+ +   + +  +I   C   +I +AS+LF +M +  + PD+ TYTT++    +A +
Sbjct: 495 ---GFATT--LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549

Query: 524 MLD-----------------VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M +                 V  L   M+  G+ PD V   +++  + +  +L  AF+
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/483 (32%), Positives = 251/483 (51%), Gaps = 4/483 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P       +  GL +  + +     +EEM   GL  D      LID    +GD+ + L
Sbjct: 6   LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 65

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            + D M+  GI   ++ Y +LIHGLC   KM +A  + + M   G  PN  T+  L++GY
Sbjct: 66  RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY 125

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  ++ RALE   EM   NL P+ V++G +++GLC   +L  A      M   G+ PN+
Sbjct: 126 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 185

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            VY+ LI G+   G + EA  L   M    ++PD+F YN +I  L   G++E A   L +
Sbjct: 186 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 245

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +   G+  + VT+ + I GY K G M +A     +M + G+ PN   ++ LI+G  KAGN
Sbjct: 246 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 305

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A+ ++  +    ++PDV   +A I GL K+G ++E L+++ E+ E  + P VFT SS
Sbjct: 306 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 365

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI G  K G +  A     E   K      +PN  +Y A++  LC  G I +A KLF  M
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKG----IAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L PD+ TY+TM+ G  +++ + +   L  +M   G+ P + +   +V G  + GD+
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 560 KSA 562
           + A
Sbjct: 482 EKA 484



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 173/532 (32%), Positives = 271/532 (50%), Gaps = 21/532 (3%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+STLI+ ++  G IEEA  +   +    V P I   NA+++ L K GK +    
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +  E+   GL  D VT+G  I      G + +A   FDEM+D G+ P   +YT+LI+G  
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               ++EA S+FR +   GV+P++ T +A + G  K   V  AL+ + E+    L P+V 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G CK GE+  A      M   G+ PNIF+YN L+DG CK+G++  A  L   M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  + PD  TY+ +I G C    +  A  L  +M  +G+  +   YN+L+ G CKEGDM
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           EKA+++  +M +KG     ++F++LIDG CK+  I  A  L+ EM+ K ++PD V +T +
Sbjct: 482 EKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL------- 458
           ID   K G M+E   L+KEM E  +   V TV +L   +   G   + + + L       
Sbjct: 541 IDWHCKAGKMEEANLLFKEMQERNLI--VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCK 598

Query: 459 --------EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
                   +  D+  G        ++  +I ALC    + +ASKL  +M    L+P    
Sbjct: 599 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 658

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +T++R    A +M +   +   +  +G+VPD      +V G   + D + A
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 710



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 266/550 (48%), Gaps = 43/550 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +         + EA   + +++   + P   AC+AL++G +++G  D V    
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + MV CG+  +++TY VLI   C  G + KA  +   MI  G +P    + +LI G C E
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 128

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           + M  A  +   M +  +VP+  +Y A+++G C   D++ A +   +M    L+PNVV +
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G    G +  A      M+  GV P+IF YN +I    KAG + EA +   E++ 
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 288 FEISPDVFT-----------------------------------YNILIKGLCGVGQLEG 312
             + PD  T                                   Y +LI G    G L  
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  + + ++  G+L +V T ++ I G  K G +++AL V S++ EKG+ P+V T+SSLI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G ++ A  L+ EM +K + P++ ++ AL+DGL K G+++   +L+  M E  + P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
              T S++I G  K+  ++ A + F E   K       P+  +Y A++   C +G + KA
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG----VQPHSFVYNALVHGCCKEGDMEKA 484

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             LF +M          ++ T++ G  ++ ++ +   L  +MI   I+PD V    ++  
Sbjct: 485 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 543

Query: 553 YQENGDLKSA 562
           + + G ++ A
Sbjct: 544 HCKAGKMEEA 553



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 210/426 (49%), Gaps = 21/426 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI    + G++ EAL ++R +    VLP +Q C+A ++GL+K G+     + +
Sbjct: 289 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 348

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+   GLV DV TY  LI   C QG+V KA  L DEM  KGI P + IY  L+ GLC  
Sbjct: 349 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 408

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +F  M E G+ P+  TY+ ++DGYCK  +V  A   +HEM    +QP+   +
Sbjct: 409 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 468

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G CK G++  A N F  M + G F     +N LIDG+CK+  + EA  L  EM  
Sbjct: 469 NALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 527

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAE-----------------GLLQKMYKEGILANVV 330
            +I PD  TY  +I   C  G++E A                   L +KM  +G+  + V
Sbjct: 528 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEV 587

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TY  +I  +CKE ++ +A  +  ++  KG+         LI   CK  ++  A  L  EM
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               L P +   + L+    + G M E  R+++ +    + P   T+  L++G   +   
Sbjct: 648 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 707

Query: 451 SNALNF 456
            +A N 
Sbjct: 708 EDARNL 713



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M E  + P+ +T + +  GL +  R++ A     E+  KT      P++   +A+I    
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEA-KLTFEEMQKTG---LKPDYNACSALIDGFM 56

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G I +  ++   M S  +  +  TY  ++ GL +  +M     +L  MI +G  P++ 
Sbjct: 57  REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116

Query: 545 INQVMVRGYQENGDLKSAFR 564
              +++ GY    ++  A  
Sbjct: 117 TFCLLIEGYCREHNMGRALE 136


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 168/525 (32%), Positives = 277/525 (52%), Gaps = 8/525 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++ L+    +MG +EEA+ + RKI      P +    +L++GL K+ +    ++ ++E
Sbjct: 22  ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 81

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M L GL  D V Y  LI      G + +A +++  M   G  P VV  + +I GL    +
Sbjct: 82  MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 141

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  +F+SM   G+ PN   Y+AL+ G CK   ++ ALE   +M      P+ +T+ V
Sbjct: 142 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNV 201

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM-SLCSEMEKF 288
           L+DGLCK G++ AA  FF  M + G  P+++ YN LI G CKAGN   A  SL  E    
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
             + D+ TY  ++  L    ++E A  L++K+   G    + TYN+L++G CK G +E+A
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + +  ++ + G  P+VVT++SLIDG  K      A  L+ EM ++ L  D V +TALI  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L + G + +   +YK M      P V T+S++I GL K GRI  A+  F  K+ +  G  
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF--KSMEARG-- 437

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +PN V+Y+A+I  LC   ++  A ++ + M+     PD  TY  ++ GL ++  +    
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
               +M++ G  PD     +++ G+ + G+  +A    + +  SR
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 542



 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 262/499 (52%), Gaps = 8/499 (1%)

Query: 68  IEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           IEEA+ +  KI      P I   NALLNGL K G+ +   +   ++V  G   DVVTY  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LID    +    +A  LF EM  +G+    V YT LI  L    K+ +A S++++M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
            VP++ T + ++DG  K   +  A+  +  M    L PN V +  L+ GLCK  ++  A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M K    P+   YN LIDG CK+G++  A +   EM +    PDV+TYNILI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 305 CGVGQLEGAE-GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           C  G  + A   L Q+    G   ++ TY +++D   K   +E+A+++  ++T  G  P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           + T+++L++G CK G ++ A+ L  ++V     PDVV +T+LIDGL K+    E  +L+K
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM    +       ++LI  L + G+I  A + +  KT  + G  C P+ V  + +I  L
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVY--KTMTSHG--CVPDVVTLSTMIDGL 417

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              G+I  A ++F  M +  L P+   Y+ ++ GL +A++M   + +LA M K    PD 
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 477

Query: 544 VINQVMVRGYQENGDLKSA 562
           +   +++ G  ++GD+++A
Sbjct: 478 ITYNILIDGLCKSGDVEAA 496



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 227/431 (52%), Gaps = 5/431 (1%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A+ L +++   G  PT+  Y  L++GLC   ++ EA  + R + + G  P++ TY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+DG  K      A + + EM    L  + V +  L+  L + G++  A + +  M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P++   + +IDG  KAG +  A+ +   ME   ++P+   Y+ LI GLC   +++ A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L +M K     + +TYN LIDG CK GD+E A +   +M E G +P+V T++ LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 375 CKAGNIDAAM-GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CKAGN DAA   L  E  I     D+  +TA++D L+K+  ++E + L +++     TP+
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           + T ++L++GL K GR+  A++   +  D      C+P+ V Y ++I  L  + +  +A 
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNG----CTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KLF +M    L  D   YT ++R LL+  ++     +   M   G VPD V    M+ G 
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 554 QENGDLKSAFR 564
            + G + +A R
Sbjct: 418 SKAGRIGAAVR 428



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 210/443 (47%), Gaps = 39/443 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ST+I   S+ G I  A+ +++ +E   + P     +AL++GL K  K D   E   +M
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---- 166
                  D +TY VLID  C  GDV  A   FDEM++ G +P V  Y ILI G C     
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 167 --------------------------------ENKMVEAESMFRSMRECGVVPNLYTYNA 194
                                             K+ EA ++   +   G  P + TYNA
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++G CK+  +  A++   +++ +   P+VVT+  L+DGL K      A   F  MA  G
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 367

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +   Y  LI    + G + +A S+   M      PDV T + +I GL   G++  A 
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            + + M   G+  N V Y++LI G CK   M+ AL + +QM +    P+ +T++ LIDG 
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+G+++AA   + EM+     PDV  +  LI G  K GN      ++ +M  ++ + +V
Sbjct: 488 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANV 547

Query: 435 FTVSSLIHGLFKNGRISNALNFF 457
            T  +LI GL K  +++ A  +F
Sbjct: 548 VTYGALISGLCKRRQLTKASLYF 570



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 169/346 (48%), Gaps = 6/346 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPA----IQACNALLNGLIKKGKFDSVW 104
            P V++   LI  F + G+ + A     +   +      I    A+++ L K  K +   
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              E++   G    + TY  L++  C  G + +A++L  +++D G  P VV YT LI GL
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             E +  EA  +F+ M   G+  +   Y AL+    +   + +A   Y  M  H   P+V
Sbjct: 348 GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDV 407

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT   ++DGL K G + AA   F  M   G+ PN  VY+ LI G CKA  +  A+ + ++
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 467

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+K   +PD  TYNILI GLC  G +E A     +M + G   +V TYN LI G+CK G+
Sbjct: 468 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 527

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            + A  V   M+      NVVT+ +LI G CK   +  A   +  M
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 155/309 (50%), Gaps = 3/309 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ ++   ++   IEEA+ +  KI      P I   NALLNGL K G+ +   +   ++
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 328

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVVTY  LID    +    +A  LF EM  +G+    V YT LI  L    K+
Sbjct: 329 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKI 388

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S++++M   G VP++ T + ++DG  K   +  A+  +  M    L PN V +  L
Sbjct: 389 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 448

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK  ++  A      M K    P+   YN LIDG CK+G++  A +   EM +   
Sbjct: 449 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 508

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV+TYNILI G C  G  + A G+   M      ANVVTY +LI G CK   + KA  
Sbjct: 509 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASL 568

Query: 351 VCSQMTEKG 359
               M E+G
Sbjct: 569 YFQHMKERG 577



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++E + L +++     TP++ T ++L++GL K GR+  A++   +  D      C+P+ 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG----CTPDV 56

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y ++I  L  + +  +A KLF +M    L  D   YT ++R LL+  ++     +   
Sbjct: 57  VTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKT 116

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M   G VPD V    M+ G  + G + +A R
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 147


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 161/540 (29%), Positives = 276/540 (51%), Gaps = 13/540 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +  +  P   PS+  F+ L+I+ ++M H    L +  +++   + P I   N L+
Sbjct: 54  SSFNRMLHMHPP---PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G   ++ T+  LI   C +G + + L+LFD+MI +G +
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    P++  Y +++D  CK   V +A   
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 230

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+H  + P++ T+  L+  LC + E +        M    + PN+ +++ ++D  CK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M K  + P+V TYN L+ G C   +++ A  +   M  +G   +VV+
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++LI+GYCK   +EKA+ +  +M  K + PN VT+S+L+ G C  G +  A+ L+ EMV
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD V +  L+D L K+  + E + L K +  + + P +   + +I G+ + G + 
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       PN   Y  +I  LC  G + +ASKLF +M+     P+ CTY
Sbjct: 471 AARDLFSNLSSKG----LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLK 570
             + RG LR    L  + LL +M+  G   D   + V+V    ++G  +S  +  SEFL+
Sbjct: 527 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 267/517 (51%), Gaps = 10/517 (1%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHH--VCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           N  L+ +    I D T+ L+   K  H     S+ + ++S  IP  N    + LI +F  
Sbjct: 57  NRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPP-NIYTLNILINSFCH 115

Query: 65  MGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +  +  A  V  KI  L   P I   N L+ GL  +GK   V   +++M+  G   +VVT
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           YG LI+  C  G    A+ L   M     +P VV+YT +I  LC + ++ +A ++F  M 
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G+ P+++TYN+L+   C + +        +EM++  + PNVV F  ++D LCK G++ 
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A +    M K GV PN+  YN L+DGHC    + EA+ +   M     +PDV +Y+ LI
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C + ++E A  L ++M ++ ++ N VTY++L+ G C  G ++ A+++  +M  +G  
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ V++  L+D  CK   +D A+ L   +   ++ PD+ ++T +IDG+ + G ++    L
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  +    + P+V+T + +I+GL + G ++ A   F E   K   GY SPN   Y  I +
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK---GY-SPNGCTYNLITR 531

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               + + L+  +L  +M +     D  T T ++  L
Sbjct: 532 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 211/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ M+     P++  +T L+  +          S+   M   G+ PN+YT N L++
Sbjct: 52  ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  +  A     ++L    QPN+ TF  L+ GLC  G++    + F  M   G  P
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 171

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+G CK G+   A+ L   ME+    PDV  Y  +I  LC   Q+  A  L 
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M    + PNVV FS+++D  CK 
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M+ + + P+VV + AL+DG      M E ++++  M+     P V + 
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S+LI+G  K  RI  A+  F E   K       PN V Y+ ++  LC+ G++  A  LF 
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKE----LIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  +Y  +L  L + +R+ + + LL  +    + PD  I  +++ G    G
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 558 DLKSA 562
           +L++A
Sbjct: 468 ELEAA 472



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 188/379 (49%), Gaps = 4/379 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N N + +A S F  M      P++  +  L+    K+   +  L   H+M    + PN+ 
Sbjct: 45  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 104

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  +L++  C +  L  A +    + K G  PNI  +N LI G C  G + E + L  +M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P+V TY  LI GLC VG    A  LL+ M +     +VV Y S+ID  CK+  +
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A ++ S+M  +G+ P++ T++SLI   C          L  EMV   ++P+VV+F+ +
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D L K+G + E   +   M++  + P+V T ++L+ G      +  A+  F     K  
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK-- 342

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G+ +P+ V Y+ +I   C   +I KA  LF +M    L P+  TY+T++ GL    R+ 
Sbjct: 343 -GF-APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 400

Query: 526 DVMMLLADMIKMGIVPDAV 544
           D + L  +M+  G +PD V
Sbjct: 401 DAIALFHEMVTRGQIPDFV 419


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 160/479 (33%), Positives = 248/479 (51%), Gaps = 11/479 (2%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           +  V P +   N L+ G    G+       + EM   G + +VVTY  LID  C  G + 
Sbjct: 3   RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A  L   M  KG++P ++ Y ++I+GLC E  M EA  +   M   G  P+  TYN L+
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +GYCK  + ++AL  + EM+ + + P+VVT+  L++ +CK   L  A  FF  M   G+ 
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   Y  LIDG  + G L EA  + +EM +   SP V TYN  I G C + ++E A G+
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +Q+M ++G+  +VV+Y+++I G+C++G++++A  +  +M EKGV P+ VT+SSLI G C+
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +  A  L  EM+   L PD   +T LI+    +G++ + L L+ EM+     P   T
Sbjct: 303 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 362

Query: 437 VSSLIHGLFKNGRISNA----LNFFLEKTDKTDGGY------CSP-NHVLYAAIIQALCY 485
            S LI+GL K  R   A         E++  +D  Y      CS        A+I+  C 
Sbjct: 363 YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCM 422

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            G + +A ++F  M   N +P    Y  ++ G  R   +     L  +MI  G VP  V
Sbjct: 423 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 231/469 (49%), Gaps = 19/469 (4%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+   +  +V TY +LI   C  G++ K L  F EM   G  P VV Y  LI   C   +
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  + +SM   G+ PNL +YN +++G C+   +  A E   EM +    P+ VT+  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++G CK G    A      M + GV P++  Y  LI+  CKA NL  AM    +M    
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+  TY  LI G    G L  A  +L +M + G   +VVTYN+ I G+C    ME+AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V  +M EKG+ P+VV++S++I G C+ G +D A  +  EMV K + PD V +++LI GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   + E   L +EML+  + P  FT ++LI+     G ++ AL+   E   K   G+ 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK---GFL 357

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT---------------M 514
            P+ V Y+ +I  L    +  +A +L   +  +   P + TY T               +
Sbjct: 358 -PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 416

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++G      M +   +   M++    P   +  V++ G+   G+L  AF
Sbjct: 417 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 465



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 233/466 (50%), Gaps = 22/466 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI A+ +MG I+EA  + + +    + P + + N ++NGL ++G     WE  
Sbjct: 44  NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 103

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM   G   D VTY  L++  C +G+  +AL +  EM+  G+ P+VV YT LI+ +C  
Sbjct: 104 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A   F  MR  G+ PN  TY  L+DG+ +   +N A    +EM      P+VVT+
Sbjct: 164 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              + G C +  +  A      M + G+ P++  Y+ +I G C+ G L  A  +  EM +
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +SPD  TY+ LI+GLC + +L  A  L Q+M   G+  +  TY +LI+ YC EGD+ K
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF----- 402
           AL +  +M  KG  P+ VT+S LI+G  K      A  L  +++ +  VP  V +     
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403

Query: 403 ----------TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
                      ALI G    G M E  R+++ M+E    P     + +IHG  + G +  
Sbjct: 404 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 463

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           A N + E       G+  P+ V    +I+AL  +G   + S++  D
Sbjct: 464 AFNLYKEMIHS---GFV-PHTVTVITLIKALFKEGMNEEMSEVIGD 505


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 272/515 (52%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP VF  L+  + +   + E    +R ++   +  +I ACN+LL GL+K G  D  WE Y
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E+V  G+  +V T  ++I+  C    +    +   +M +KG+ P VV Y  LI+  C +
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  +  SM   G+ P ++TYNA+++G CK     RA     EML   + P+  T+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+   C+   +  A   F  M   GV P++  ++ LI    K G L +A+    +M+ 
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD   Y ILI G C  G +  A  +  +M ++G + +VVTYN++++G CKE  + +
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++MTE+GV P+  TF++LI+G  K GN++ A+ L+  M+ ++L PDVV +  LID
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   M++   L+ +M+  +I P+  +   LI+G    G +S A   + E  +K   G
Sbjct: 386 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK---G 442

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +     +    I++  C  G  +KA +  S+M    + PD  TY T++ G ++ + M   
Sbjct: 443 F-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 501

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L+  M   G++PD +   V++ G+   G ++ A
Sbjct: 502 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 244/472 (51%), Gaps = 9/472 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           L+ +E     P V  ++TLI A+   G +EEA  +   +    + P +   NA++NGL K
Sbjct: 120 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 179

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            GK+       +EM+  G+  D  TY +L+  CC   ++M A  +FDEM  +G+ P +V 
Sbjct: 180 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           ++ LI  L     + +A   FR M+  G+ P+   Y  L+ G+C+   ++ AL+   EML
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                 +VVT+  +++GLCK   L  A   F  M + GVFP+ + +  LI+G+ K GN+ 
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A++L   M +  + PDV TYN LI G C   ++E    L   M    I  N ++Y  LI
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +GYC  G + +A  +  +M EKG E  ++T ++++ G C+AGN   A    + M++K +V
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 479

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD + +  LI+G  K+ NM     L  +M  + + P V T + +++G  + GR+  A   
Sbjct: 480 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 539

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            L+  ++      +P+   Y ++I        + +A ++  +M      PD+
Sbjct: 540 MLKMIERG----VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 215/410 (52%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L+       K+ E    FR ++  G+  ++   N+L+ G  KV  V+ A E Y E
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   +Q NV T  ++++ LCK  ++    +F   M + GVFP++  YN LI+ +C+ G 
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA  L   M    + P VFTYN +I GLC  G+   A+G+L +M K G+  +  TYN 
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  +M  A  +  +M  +GV P++V+FS+LI    K G +D A+  + +M    
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD V++T LI G  ++G M E L++  EMLE      V T +++++GL K   +S A 
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E T++       P+   +  +I     DG + KA  LF  M   NL+PD  TY T+
Sbjct: 328 ELFTEMTERG----VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 383

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M  V  L  DMI   I P+ +   +++ GY   G +  AFR
Sbjct: 384 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 184/355 (51%), Gaps = 4/355 (1%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           + + N   N + F +L+    +  +LR     F  +   G+  +I   N L+ G  K G 
Sbjct: 18  LTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW 77

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A  +  E+ +  +  +V+T NI+I  LC   ++E  +  L  M ++G+  +VVTYN+
Sbjct: 78  VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+ YC++G +E+A  +   M+ KG++P V T++++I+G CK G    A G+  EM+   
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PD   +  L+    ++ NM +  R++ EM    + P + + S+LI  L KNG +  AL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            +F    D  + G  +P++V+Y  +I   C +G + +A K+  +M       D  TY T+
Sbjct: 258 KYF---RDMKNAGL-APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           L GL + K + +   L  +M + G+ PD      ++ GY ++G++  A    E +
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 8/280 (2%)

Query: 295 FTYNILIKGLCGVGQL-EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +++L++      +L EG E   + +  +G+  ++   NSL+ G  K G ++ A  +  
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 86

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++   GV+ NV T + +I+  CK   I+      ++M  K + PDVV +  LI+   + G
Sbjct: 87  EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 146

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++E   L   M    + P VFT +++I+GL K G+   A        D+      SP+ 
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL----DEMLKIGMSPDT 202

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD-VMMLLA 532
             Y  ++   C +  ++ A ++F +M S  + PD  +++ ++ GLL     LD  +    
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFR 261

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           DM   G+ PD VI  +++ G+  NG +  A +  + + E 
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 301



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 6/259 (2%)

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
           GV ++E  E L+      G  +N + ++ L+  Y +   + +       +  KG+  ++ 
Sbjct: 6   GVSRVEIVESLVLTYGNCG--SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN 63

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             +SL+ G  K G +D A  +Y E+V   +  +V     +I+ L K+  ++ T     +M
Sbjct: 64  ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 123

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            E  + P V T ++LI+   + G +  A     E  D   G    P    Y AII  LC 
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAF----ELMDSMSGKGLKPCVFTYNAIINGLCK 179

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G+ L+A  +  +M    + PD  TY  +L    R   M+D   +  +M   G+VPD V 
Sbjct: 180 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239

Query: 546 NQVMVRGYQENGDLKSAFR 564
              ++    +NG L  A +
Sbjct: 240 FSALIGLLSKNGCLDQALK 258


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 271/515 (52%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP VF  L+  + +   + E    +R ++   +  +I ACN+LL GL+K G  D  WE Y
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E+V  G+  +V T  ++I+  C    +    +   +M +KG+ P VV Y  LI+  C +
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  +  SM   G+ P ++TYNA+++G CK     RA     EML   + P+  T+
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+   C+   +  A   F  M   GV P++  ++ LI    K G L +A+    +M+ 
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD   Y ILI G C  G +  A  +  +M ++G   +VVTYN++++G CKE  + +
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++MTE+GV P+  TF++LI+G  K GN++ A+ L+  M+ ++L PDVV +  LID
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   M++   L+ +M+  +I P+  +   LI+G    G +S A   + E  +K   G
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK---G 703

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +     +    I++  C  G  +KA +  S+M    + PD  TY T++ G ++ + M   
Sbjct: 704 F-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L+  M   G++PD +   V++ G+   G ++ A
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 238/458 (51%), Gaps = 7/458 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +   +    + P +   NA++NGL K GK+       +EM
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D  TY +L+  CC   ++M A  +FDEM  +G+ P +V ++ LI  L     +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   FR M+  G+ P+   Y  L+ G+C+   ++ AL+   EML      +VVT+  +
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK   L  A   F  M + GVFP+ + +  LI+G+ K GN+ +A++L   M +  +
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TYN LI G C   ++E    L   M    I  N ++Y  LI+GYC  G + +A  
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EKG E  ++T ++++ G C+AGN   A    + M++K +VPD + +  LI+G  
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+ NM     L  +M  + + P V T + +++G  + GR+  A    L+  ++      +
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG----VN 810

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           P+   Y ++I        + +A ++  +M      PD+
Sbjct: 811 PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/410 (33%), Positives = 217/410 (52%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L+       K+ E    FR ++  G+  ++   N+L+ G  KV  V+ A E Y E
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   +Q NV T  ++++ LCK  ++    +F   M + GVFP++  YN LI+ +C+ G 
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA  L   M    + P VFTYN +I GLC  G+   A+G+L +M K G+  +  TYN 
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  +M  A  +  +M  +GV P++V+FS+LI    K G +D A+  + +M    
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD V++T LI G  ++G M E L++  EMLE      V T +++++GL K   +S A 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E T++  G +  P+   +  +I     DG + KA  LF  M   NL+PD  TY T+
Sbjct: 589 ELFTEMTER--GVF--PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 644

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M  V  L  DMI   I P+ +   +++ GY   G +  AFR
Sbjct: 645 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 207/414 (50%), Gaps = 24/414 (5%)

Query: 157 YTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           ++ +IH L    ++ +A++ + R +R+ GV               +V  V   +     +
Sbjct: 239 FSAMIHILVRSRRLPDAQAVILRMVRKSGV--------------SRVEIVESLV-----L 279

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
            + N   N + F +L+    +  +LR     F  +   G+  +I   N L+ G  K G +
Sbjct: 280 TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 339

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  +  E+ +  +  +V+T NI+I  LC   ++E  +  L  M ++G+  +VVTYN+L
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+ YC++G +E+A  +   M+ KG++P V T++++I+G CK G    A G+  EM+   +
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD   +  L+    ++ NM +  R++ EM    + P + + S+LI  L KNG +  AL 
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +F    D  + G  +P++V+Y  +I   C +G + +A K+  +M       D  TY T+L
Sbjct: 520 YF---RDMKNAGL-APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            GL + K + +   L  +M + G+ PD      ++ GY ++G++  A    E +
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 8/280 (2%)

Query: 295 FTYNILIKGLCGVGQL-EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +++L++      +L EG E   + +  +G+  ++   NSL+ G  K G ++ A  +  
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 347

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++   GV+ NV T + +I+  CK   I+      ++M  K + PDVV +  LI+   + G
Sbjct: 348 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 407

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++E   L   M    + P VFT +++I+GL K G+   A        D+      SP+ 
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL----DEMLKIGMSPDT 463

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD-VMMLLA 532
             Y  ++   C +  ++ A ++F +M S  + PD  +++ ++ GLL     LD  +    
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFR 522

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           DM   G+ PD VI  +++ G+  NG +  A +  + + E 
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 562


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 262/520 (50%), Gaps = 7/520 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +EEA     ++    + P      AL+NGL K G+        
Sbjct: 279 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALL 338

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  +VV Y  L+D    +G   +A ++ +EMI  G++P  ++Y  LI GLC  
Sbjct: 339 DEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKI 398

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +   M + G  P+ +TY+ LM G+ +  D + A E  +EM +  + PN  T+
Sbjct: 399 GQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTY 458

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G++++GLC+ GE + AGN    M   G+ PN F+Y  LI GH K G++  A      M K
Sbjct: 459 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK 518

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD+F YN LIKGL  VG++E AE    ++ K G++ +  TY+ LI GYCK  ++EK
Sbjct: 519 ANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEK 578

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM   G++PN  T++ L++G  K+ + +    +   M+     PD  ++  +I 
Sbjct: 579 ADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIR 638

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LS+  NM+    +  E+ +  + P +   SSLI GL K   +  A+    E   +    
Sbjct: 639 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG--- 695

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  V Y A+I   C  G I +A  +F  + +  L P+  TYT ++ G  +   + D 
Sbjct: 696 -LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             L  DM+  GI PDA +  V+  G  +  DL+ A   +E
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 794



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 244/513 (47%), Gaps = 7/513 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +V   L+  + + G +  A  V      + + P  + CN LL  L++    + VW+    
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+  DV TY   ++  C   D   A  +F+EM  +      V Y ++I GLC    
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA      M + G+ P+ +TY ALM+G CK   +  A     EM    L+PNVV +  
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG  K G+   A +    M   GV PN  +Y+ LI G CK G L  A  L +EM K  
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD FTY+ L++G       +GA  LL +M   GIL N  TY  +I+G C+ G+ ++A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  +M  +G++PN   ++ LI G  K G+I  A      M   +++PD+  + +LI GL
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           S  G ++E    Y ++ +  + P  FT S LIHG  K   +  A     +  +       
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG----L 591

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y  +++         K S +   M     +PDN  Y  ++R L R++ M    M
Sbjct: 592 KPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 651

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +L ++ K G+VPD  I   ++ G  +  D++ A
Sbjct: 652 VLTEVEKNGLVPDLHIYSSLISGLCKMADMEKA 684



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 255/544 (46%), Gaps = 60/544 (11%)

Query: 38  VFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLN 92
            F+ LN +      P+  ++  LI    ++G +  A  +     K+   P     + L+ 
Sbjct: 369 AFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQ 428

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  +    D  +E   EM   G++ +  TYG++I+  C  G+  +A NL +EMI +G++P
Sbjct: 429 GHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKP 488

Query: 153 TVVIYTILI-----------------------------------HGLCNENKMVEAESMF 177
              +Y  LI                                    GL    ++ EAE  +
Sbjct: 489 NAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY 548

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             +++ G+VP+ +TY+ L+ GYCK  ++ +A +   +ML+  L+PN  T+  L++G  K 
Sbjct: 549 AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKS 608

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            +     +    M   G  P+  +Y  +I    ++ N+  A  + +E+EK  + PD+  Y
Sbjct: 609 NDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIY 668

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           + LI GLC +  +E A GLL +M KEG+   +V YN+LIDG+C+ GD+ +A +V   +  
Sbjct: 669 SSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILA 728

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+ PN VT+++LIDG CK G+I  A  LY +M+ + + PD  V+  L  G S   ++++
Sbjct: 729 KGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQ 788

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L L +EM   +    V   S+L+ G  K GR+           D+       PN     
Sbjct: 789 ALFLTEEMFN-RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE----IVPNAQTVE 843

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I      G++ +A ++F++++       +    +               +L  DMI  
Sbjct: 844 NVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFS---------------LLFTDMINK 888

Query: 538 GIVP 541
           G++P
Sbjct: 889 GLIP 892



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 10/349 (2%)

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           VL+D   K G +R A    + M   G+ P     N L+    +A  +     L   ME  
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PDV+TY+  ++  C     + A+ + ++M +     N VTYN +I G C+ G +E+A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
                +M + G+ P+  T+ +L++G CK G +  A  L  EM    L P+VVV+  L+DG
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG---RISNALNFFLEKTDKTD 465
             K+G   E   +  EM+ A + P+     +LI GL K G   R S  LN  ++   + D
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                  H L     Q    DG    A +L ++MR+  + P+  TY  M+ GL +     
Sbjct: 420 ---TFTYHPLMQGHFQHYDKDG----AFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +   LL +MI  G+ P+A +   ++ G+ + G +  A    E + ++ +
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 167/544 (30%), Positives = 273/544 (50%), Gaps = 46/544 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI   ++ G + +A  +++K+    V P+  A  +L++GL     FD   E + +M 
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G     VTY V+ID  C +G + +A +L  +MI+ G  P VV Y  ++ GLC  +++ 
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M   G  PN  ++N ++ G C+ + +++A + +HEM   ++ P+  ++G+L+
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNI-------------------------------- 259
           DGL K G+L  A   F  M   G+ P+                                 
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 260 ---FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
              F +N LID HCK G L EA  L   M      PDV TY+ LI GLC + +++ A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M K      VVT N+LI G CK G +++A  V   M   G  P+VVT+++L+ G C+
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG  + A  L ++MV + L P+VV +TAL+ GL K   + E   ++ +M  +   P++FT
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G    G++   L  F E          SP+HV+Y  +   LC  G+  +A ++ 
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMV----CAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 497 SDMRSDNLRPD---NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            + R ++LR +   +  Y   + GLL A +M   +  + DM++ G +P       +V G 
Sbjct: 489 REGR-ESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 554 QENG 557
            ++G
Sbjct: 548 CKSG 551



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/447 (34%), Positives = 228/447 (51%), Gaps = 4/447 (0%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D  +YG+LID     G +  A NLF +++  G+ P+ V YT LIHGLC  N   +A  +F
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G  P+  TYN ++D  CK   +  A +   +M+     P+VVT+  +MDGLCK 
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A   F  M + G  PN   +N +I G C+   + +A  +  EME  +I PD ++Y
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            ILI GL   G+L  A  L Q+M   GI  + VTYN +I G C    +++AL +   M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG  P+  TF+ LID  CK G +D A  L   M     VPDVV ++ LI GL     + +
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L ++M++ +  P+V T ++LIHGL K GRI  A     E  D       SP+ V Y 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA----REVLDAMVSSGQSPDVVTYN 364

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++   C  GQ  +A +L SDM +  L P+  TYT ++ GL +A R+ +   + A M   
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G  P+      ++ G+   G +    +
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLK 451



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 248/494 (50%), Gaps = 7/494 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P   +   L++GL K GK +     +++++  G+    V Y  LI   C       A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF +M  +G  P+ V Y ++I   C    + EA  + + M E G VP++ TYN +MDG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK + V  AL  ++EM      PN  +   ++ GLC+  ++  A   F  M    + P+ 
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y  LIDG  KAG L EA  L   M    I+P   TYN++I G+C    L+ A  L + 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G   +  T+N LID +CK G +++A  +  +MT+ G  P+VVT+S+LI G C    
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A  L  +MV +   P VV    LI GL K G +KE   +   M+ +  +P V T ++
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+HG  + G+   A       +D    G  +PN V Y A++  LC   ++ +A  +F+ M
Sbjct: 366 LVHGHCRAGQTERARELL---SDMVARGL-APNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +S    P+  TYT ++ G   A ++   + L  +M+  GI PD V+   +     ++G  
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG-- 479

Query: 560 KSAFRCSEFLKESR 573
           +SA R  E L+E R
Sbjct: 480 RSA-RALEILREGR 492



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 219/454 (48%), Gaps = 40/454 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T++    +   +EEAL ++ ++E L   P  ++ N ++ GL ++ K D   + + EM
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  +YG+LID     G + +A  LF  M+D GI P+ V Y ++IHG+C    +
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F+SMR  G  P+ +T+N L+D +CK   ++ A      M      P+VVT+  L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC +  +  A +    M K    P +   N LI G CKAG + EA  +   M     
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV TYN L+ G C  GQ E A  LL  M   G+  NVVTY +L+ G CK   + +A  
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL----- 405
           V +QM   G  PN+ T+++LI G C AG +D  + L+ EMV   + PD VV+  L     
Sbjct: 417 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 406 --------------------------------IDGLSKDGNMKETLRLYKEMLEAKITPS 433
                                           +DGL + G M+  L   ++M+     P+
Sbjct: 477 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPA 536

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
               +SL+ GL K+G+   A     E  D   GG
Sbjct: 537 PERCASLVAGLCKSGQGGEARAVLEEIMDLAYGG 570



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 199/432 (46%), Gaps = 45/432 (10%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +FN +  L     N    +T+I+   +   I++A  V+ ++E   + P   +   L++GL
Sbjct: 137 LFNEMERLGCTP-NRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K GK +  ++ ++ M+  G+    VTY V+I   C    + +AL LF  M  KG  P+ 
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             + ILI   C   K+ EA  + + M + G VP++ TY+ L+ G C +A V+ A     +
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+    +P VVT   L+ GLCK G ++ A      M   G  P++  YN L+ GHC+AG 
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 275 -----------------------------------LFEAMSLCSEMEKFEISPDVFTYNI 299
                                              L EA  + ++M+    +P++FTY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-- 357
           LI G C  GQ++G   L  +M   GI  + V Y +L    CK G   +AL +  +  E  
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495

Query: 358 --KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             +     V  F+  +DG  +AG ++ A+G   +MV    +P      +L+ GL K G  
Sbjct: 496 RSEAWGDEVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 416 KETLRLYKEMLE 427
            E   + +E+++
Sbjct: 554 GEARAVLEEIMD 565


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 238/433 (54%), Gaps = 6/433 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M D G EP VV Y  LI GLC  N+   A+ +F  M+     P++ TYN L+DG  +   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           + RA+  + EML      +V++F +L+ GLC+ G++  A  FF  M      PN+  Y+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG CKA  + +A+ L   M+    SPDV TY IL+ GLC   ++  A  +L++M   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N+VTYNSL+ G C+   +  AL++   MT +G  PNVVT+ +LIDG CK G +  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +  +M+ K   PD++++  LI+GL K   + E++ L +  +   I P V T SS+I+GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            ++ R+  A    L    K+ G  C P+ +LY+ +I  LC  G++ +A  L+  M  D  
Sbjct: 299 CRSNRLDEACRLLLYV--KSRG--CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             D  TY+T++ GL +A R+ +  +LLA M++MG  P  +    +++G  +   L  A  
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414

Query: 565 CSEFLKESRIGSS 577
             E ++ S    S
Sbjct: 415 LVEEMERSNCAPS 427



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/484 (34%), Positives = 264/484 (54%), Gaps = 23/484 (4%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI-- 78
           + L K+ +P      +F  + S+E    +PS+  ++TL+      G +E A+ +++++  
Sbjct: 18  DGLCKNNEPDRA-QELFEHMKSVEC---SPSMVTYNTLLDGLFRTGKLERAMALFQEMLD 73

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLVADVVTYGVLIDCCCGQGDVMK 137
                + + N L+ GL + GK ++  EF+ +M   C    +V+TY VLID  C    V +
Sbjct: 74  RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS--PNVITYSVLIDGLCKANRVSQ 131

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ L + M  +G  P V+ YTIL+ GLC E+K+  A  + R M + G VPNL TYN+L+ 
Sbjct: 132 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 191

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C+   V+ AL    +M      PNVVT+G L+DGLCKVG ++ A      M   G  P
Sbjct: 192 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 251

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ +YN LI+G CKA  + E+++L        I PDV TY+ +I GLC   +L+ A  LL
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             +   G   +V+ Y++LIDG CK G +++A  +   MT  G + +VVT+S+LIDG CKA
Sbjct: 312 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  L   MV     P  + + +LI GL    ++ E + L +EM  +   PS  T 
Sbjct: 372 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 431

Query: 438 SSLIHGLFKNGRI-SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           + LIHG+ +  R+ S AL++F E  D        P+H+ Y+ +++        LK SK  
Sbjct: 432 NILIHGMCRMERVDSAALDYFQEMIDNG----VIPDHITYSILLEG-------LKKSKDL 480

Query: 497 SDMR 500
            ++R
Sbjct: 481 HELR 484



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/478 (33%), Positives = 257/478 (53%), Gaps = 8/478 (1%)

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           +E    +E     + +E  P++   N LL+GL + GK +     ++EM L     DV+++
Sbjct: 24  NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM-LDRRSHDVISF 82

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +L+   C  G +  AL  F +M D+   P V+ Y++LI GLC  N++ +A  +  SM+ 
Sbjct: 83  NILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKA 141

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G  P++ TY  L+DG CK + V  A E   EML     PN+VT+  L+ GLC+   +  
Sbjct: 142 RGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD 201

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M   G  PN+  Y  LIDG CK G + +A ++ ++M     +PD+  YN+LI 
Sbjct: 202 ALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 261

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC   Q++ +  LL++    GI  +VVTY+S+I G C+   +++A  +   +  +G  P
Sbjct: 262 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 321

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V+ +S+LIDG CKAG +D A  LY  M       DVV ++ LIDGL K G + E   L 
Sbjct: 322 DVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 381

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M+     PS  T +SLI GL       N L+  +E  ++ +   C+P+ V Y  +I  
Sbjct: 382 ARMVRMGTPPSTMTYNSLIKGLCD----LNHLDEAIELVEEMERSNCAPSAVTYNILIHG 437

Query: 483 LCYDGQILKAS-KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD-MIKMG 538
           +C   ++  A+   F +M  + + PD+ TY+ +L GL ++K + ++  L+ D M+++G
Sbjct: 438 MCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 154/479 (32%), Positives = 258/479 (53%), Gaps = 7/479 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N+L++GL K  + D   E +E M        +VTY  L+D     G + +A+ L
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+D+     V+ + IL+ GLC   K+  A   FR M +    PN+ TY+ L+DG CK
Sbjct: 68  FQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCK 125

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V++A+E    M      P+V+T+ +L+DGLCK  ++ AA      M   G  PN+  
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G C+A  + +A++L  +M     +P+V TY  LI GLC VG+++ A  +L  M 
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   +++ YN LI+G CK   +++++++  +    G++P+VVT+SS+I G C++  +D
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L   +  +   PDV++++ LIDGL K G + E   LY+ M        V T S+LI
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K GR+  A +  L +  +       P+ + Y ++I+ LC    + +A +L  +M  
Sbjct: 366 DGLCKAGRVDEA-HLLLARMVRMGT---PPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMM-LLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            N  P   TY  ++ G+ R +R+    +    +MI  G++PD +   +++ G +++ DL
Sbjct: 422 SNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 277/547 (50%), Gaps = 18/547 (3%)

Query: 47  IPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKF 100
           IP F+ + FS  +L+          EA  ++R  E+L    P + + N +++G    G  
Sbjct: 70  IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRS-ELLASCEPDVCSYNIVISGFCNAGDL 128

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
            +  E  EEM   G   D  T+  +I      GD+  A++    M   G +P VV YT L
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTAL 185

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I       K+ EA  +   MRE G  PNL TYN L+D  CK++ V  A +   +M+    
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PNV+TF  L+DG CK G +  A      M   G+ PN+  Y+ LIDG CK+    EA  
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           +  EM+   ++PD FTY+ LI GLC   ++E AE +L++M   G   +VV Y+S+I  +C
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-SLVPDV 399
           K G + +A     +M ++   P+VVT++++IDG CK G I  A  +  +M     ++PDV
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V ++ +I+GL K   + E  +L   M +A   P V T +++I GL K GR+  A  + L+
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA-EYLLQ 484

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              +     C+PN V Y  +I  LC   ++ +A ++  +MR+    P+  TY TM+ GL 
Sbjct: 485 GMKRAG---CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 541

Query: 520 RAKRMLDVMMLLADMI--KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            + R+ +   L+  M   +    PDA   + +V     +  ++ A +  E +K S   S 
Sbjct: 542 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK-STTSSQ 600

Query: 578 ETEGHTT 584
           + +G  T
Sbjct: 601 QEQGSLT 607



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 240/469 (51%), Gaps = 5/469 (1%)

Query: 36  YSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNG 93
           ++    L  ++   F P  F+   +I A +  G ++ A+   R +   P +    AL+  
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAA 188

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             +  K +   +  EEM   G   ++VTY VL+D  C    V  A ++  +MI+ G  P 
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           V+ +  L+ G C    + +A  +   M   G+ PN+ TY+AL+DG CK      A E   
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM    + P+  T+  L+ GLCK  ++  A      MA  G  P++ VY+ +I   CK+G
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTY 332
            L EA     EM K   SPDV TYN +I GLC +G++  A+ +L++M + G +L +VVTY
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++I+G CK   + +A  +  +M + G  P+VVT++++IDG CK G ++ A  L   M  
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               P+VV +T LI GL K   + E  R+ +EM  A   P++ T +++++GL  +GRI  
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 548

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           A        D      CSP+   Y  I+ AL     + +A +L   M+S
Sbjct: 549 AQQLVQRMKDGR--AECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/532 (31%), Positives = 280/532 (52%), Gaps = 26/532 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI        I EA  ++   +K+   P   A   L+ GL + GK +     ++EM
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331

Query: 111 V-------LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +       +  +  DV T  +LID  C +G V++A  L + MI +G    +V Y+ LI G
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN---- 219
           LC E+++ EA  +F SM++ G  P+  TY  LM G C+  ++N AL+ + EML+      
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451

Query: 220 --LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
              +P ++++ +++DGLCK      A   F  M   G+ P++  Y  LI G C +G   +
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +EM    I PDV T ++LI  LC  G++  A  LL+ + + G + +VVT  +L+ 
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS--- 394
           G C +  + KA  +  +M + G  PNVVT ++L+ G C++GNI  A+ L+  M+  +   
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 395 ---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P+ + ++ +IDGL K G   E   L+KEM    + P V + +SLIHG  ++G+  
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A   F E  D        P+   ++ +I  LC +G++++A++L   M      P+  TY
Sbjct: 692 DAKYLFNEMVDIG----VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TT+++GL    R+ +   L   M K+G +PD V    +++G  + G++K+A 
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 270/529 (51%), Gaps = 21/529 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI        I EA W++  ++ L   P       L+ GL + G  +   + ++EM
Sbjct: 384 TYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM 443

Query: 111 --------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                   + C     +++Y ++ID  C      +A  LF+EM  +GI P V+ YT LIH
Sbjct: 444 LNDTGRYGIKCK--PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIH 501

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C   K  +A+ +F  M + G+ P++ T + L+D  CK   V  A +    ++      
Sbjct: 502 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL 561

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL- 281
           +VVT   L+ GLC    +  A   F+ M K G  PN+     L+ G C++GN+  A+ L 
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621

Query: 282 ---CSEMEKFEIS--PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
               S+   + I+  P+  +Y+I+I GLC  G+ + A  L ++M   G++ +V++Y SLI
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 681

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G+C+ G  + A  + ++M + GV+P+V TFS LID  CK G +  A  L   M+ +  +
Sbjct: 682 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 741

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+ V +T L+ GL  +  + E  +L+ +M +    P V T  +L+ GL + G I  AL  
Sbjct: 742 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801

Query: 457 FLEKTDKTD--GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             +    T   G    P+ + Y+ II  LC  G+  +A +LF +M++  + P+  +YT++
Sbjct: 802 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 861

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + G  R+ ++ D   L  +M+  G+  +AV   VM+ G+ + G +  A 
Sbjct: 862 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 255/471 (54%), Gaps = 23/471 (4%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K  P++  +S +I    +    +EA  ++ +++   ++P + +   L++G    GK++  
Sbjct: 453 KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 512

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + EM+  G+  DV T  VLID  C +G V++A  L + +I +G    VV  T L+ G
Sbjct: 513 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG 572

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH----- 218
           LC ++++ +A  +F  M++ G +PN+ T   LM G C+  ++  ALE +  ML       
Sbjct: 573 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 632

Query: 219 -NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            N +PN +++ +++DGLCK G    A   F  M   GV P++  Y  LI G C++G   +
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 692

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +EM    + PDV T+++LI  LC  G++  A  LL+ M + G + N VTY +L+ 
Sbjct: 693 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 752

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS--- 394
           G C    + +A  +  +M + G  P+VVT+ +L+ G C+ GNI  A+ L+ +M+  +   
Sbjct: 753 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812

Query: 395 ---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                PDV+ ++ +IDGL K G   E   L+KEM    + P+V + +SLIHG  ++G++ 
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           +A + F E  D+        N V Y+ +I   C +GQI KA  LF  M ++
Sbjct: 873 DAKHLFNEMVDQG----VQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 278/572 (48%), Gaps = 67/572 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFDSVW 104
            + TL+    + G+I  AL ++++         I+  P + + + +++GL K  + D   
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 185

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV---------- 154
           E ++EM   G++ DV++Y  LI   C  G   KA  LF+EM+D GI+P V          
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245

Query: 155 -------------------------VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
                                    V Y+ LI GLC ++++ EA  +F SM++ G  P+ 
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDA 305

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQ-------PNVVTFGVLMDGLCKVGELRA 242
             Y  LM G C+   +N AL  + EML+   Q       P+V T  +L+D LCK G++  
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE 365

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M + G   +I  Y+ LI G C    + EA  L   M+K    PD  TY  L+K
Sbjct: 366 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 425

Query: 303 GLCGVGQLEGAEGLLQKMYKE----GI--LANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           GLC  G +  A  L Q+M  +    GI     +++Y+ +IDG CK+   ++A  +  +M 
Sbjct: 426 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMK 485

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G+ P+V+++++LI G C +G  + A  L+ EM+   + PDV   + LID L K G + 
Sbjct: 486 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVI 545

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  +L + +++      V T ++L+ GL    RIS A   FL    K     C PN V  
Sbjct: 546 EANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL----KMQKLGCMPNVVTC 601

Query: 477 AAIIQALCYDGQILKASKLFSDMRSD------NLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           A +++ LC  G I  A +L  +M SD      N +P+  +Y+ ++ GL +  R  +   L
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +M  +G++PD +    ++ G+  +G  K A
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 693



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 263/534 (49%), Gaps = 30/534 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI        I EA W++  ++ L   P       L+ GL + G  +   + ++EM
Sbjct: 91  TYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM 150

Query: 111 --------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                   + C     +++Y ++ID  C      +A  LF EM  +G+ P V+ YT LIH
Sbjct: 151 LNDTGRYGIKCK--PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 208

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C+  K  +A+ +F  M + G+ P++ T   L+D +CK   V  A E    M+H     
Sbjct: 209 GFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           ++VT+  L+ GLC    +  A   F+ M K G  P+   Y  L+ G C+ G +  A+ L 
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328

Query: 283 SEMEKFE-------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EM           I PDV T ++LI  LC  G++  A  LL+ M + G + ++VTY++L
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS- 394
           I G C E  + +A  +   M + G  P+ +T+ +L+ G C+ GNI+ A+ L+ EM+  + 
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448

Query: 395 -----LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
                  P ++ ++ +IDGL KD    E   L++EM    I P V + ++LIHG   +G+
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
              A   F E  D        P+    + +I  LC  G++++A+KL   +       D  
Sbjct: 509 WEKAKCLFNEMLDVG----IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           T TT+++GL    R+     L   M K+G +P+ V    +++G  ++G++K A 
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 618



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 252/493 (51%), Gaps = 30/493 (6%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A + G++++G       +  ++V   +  DV T  +LID  C +G V++A  L + MI +
Sbjct: 31  AAMAGIMRRG-------YIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR 83

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G    +V Y+ LI GLC E+++ EA  +F SM++ G  P+  TY  LM G C+  ++N A
Sbjct: 84  GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIA 143

Query: 209 LEFYHEMLHHN------LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
           L+ + EML+         +P ++++ +++DGLCK      A   F  M   G+ P++  Y
Sbjct: 144 LQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISY 203

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             LI G C +G   +A  L +EM    I PDV T  +LI   C  G++  A  LL+ M  
Sbjct: 204 TSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH 263

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G + ++VTY++LI G C +  + +A  +   M + G  P+ + + +L+ G C+ G I+ 
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 323

Query: 383 AMGLYTEMV-------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           A+ L+ EM+       IK + PDV   + LID L K+G + E   L + M++      + 
Sbjct: 324 ALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 383

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T S+LI GL    RIS A   F+          C P+ + Y  +++ LC  G I  A +L
Sbjct: 384 TYSTLIKGLCMEHRISEATWLFMSMQKLG----CRPDAITYGTLMKGLCQTGNINIALQL 439

Query: 496 FSDMRSDNLR------PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             +M +D  R      P   +Y+ ++ GL + +R  +   L  +M   GI+PD +    +
Sbjct: 440 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTL 499

Query: 550 VRGYQENGDLKSA 562
           + G+  +G  + A
Sbjct: 500 IHGFCLSGKWEKA 512



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 53/438 (12%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALE---------FYHEMLHHNLQPNVVTFGVL 230
           MR  G+ P+ +T+N L++  C V  VN  L          +  +++ ++++P+V T  +L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK G++  A      M + G   +I  Y+ LI G C    + EA  L   M+K   
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 291 SPDVFTYNILIKGLCGVGQL---------------------------------------- 310
            PD  TY  L+KGLC  G +                                        
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 311 -EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  L ++M  +G++ +V++Y SLI G+C  G  EKA  + ++M + G++P+V T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LID  CK G +  A  L   MV +  + D+V ++ LI GL     + E  +L+  M +  
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD--GGYC-SPNHVLYAAIIQALCYD 486
             P      +L+ GL + G+I+ AL+   E  + T   G  C  P+    + +I  LC +
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++++A++L   M       D  TY+T+++GL    R+ +   L   M K+G  PDA+  
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 547 QVMVRGYQENGDLKSAFR 564
             +++G  + G++  A +
Sbjct: 421 GTLMKGLCQTGNINIALQ 438


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 276/516 (53%), Gaps = 6/516 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V  F E+M + G+  ++ TY ++I+C C +  + 
Sbjct: 58  KSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLS 117

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G  P++V    L++G C+ N++ EA ++   M E G  P+  T+  L+
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G  +    + A+     M+    QP++VT+G +++GLCK GE   A N    M K  + 
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ +Y+ +ID  CK  ++ +A++L +EM+   I PDVFTY+ LI  LC  G+   A  L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  NVVT+NSLID + KEG + +A  +  +M ++ ++PN+VT++SLI+G C 
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++T MV K  +PDVV +  LI+G  K   + + + L+++M    +  +  T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG F+     NA   F  K   +DG +  PN + Y  ++  LC +G++ KA  +F
Sbjct: 418 YTTLIHGFFQASDCDNAQMVF--KQMVSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVF 473

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + PD  TY  M  G+ +A ++ D   L   +   G+ PD +    M+ G+ + 
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533

Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
           G  + A+  + F+K    G     G        HL+
Sbjct: 534 GLKEEAY--TLFIKMKEDGPLPDSGTYNTLIRAHLR 567



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 209/398 (52%), Gaps = 3/398 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TL+    +     EA+ +  ++ V    P +    A++NGL K+G+ D       +M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + ADVV Y  +ID  C    V  ALNLF EM +KGI P V  Y+ LI  LCN  + 
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   M E  + PN+ T+N+L+D + K   +  A + + EM+  ++ PN+VT+  L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G C    L  A   F  M      P++  YN LI+G CKA  + + M L  +M +  +
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +  TY  LI G       + A+ + ++M  +G+  N++TYN+L+DG CK G +EKA+ 
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   + +  +EP++ T++ + +G CKAG ++    L+  + +K + PDV+ +  +I G  
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           K G  +E   L+ +M E    P   T ++LI    ++G
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 226/438 (51%), Gaps = 4/438 (0%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A++LF EM+     P++V ++ L+  +    K     S    M   GV  NLYTYN ++
Sbjct: 48  EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +  C+ + ++ AL    +M+     P++VT   L++G C    +  A      M + G  
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   +  L+ G  +     EA++L   M      PD+ TY  +I GLC  G+ + A  L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L KM K  I A+VV Y+++ID  CK   ++ AL++ ++M  KG+ P+V T+SSLI   C 
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G    A  L ++M+ + + P+VV F +LID  +K+G + E  +L+ EM++  I P++ T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI+G   + R+  A   F     K     C P+ V Y  +I   C   +++   +LF
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKD----CLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            DM    L  +  TYTT++ G  +A    +  M+   M+  G+ P+ +    ++ G  +N
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 557 GDLKSAFRCSEFLKESRI 574
           G L+ A    E+L++S++
Sbjct: 464 GKLEKAMVVFEYLQKSKM 481



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 209/384 (54%), Gaps = 6/384 (1%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
            N LN +E  K    V  +ST+I +  +  H+++AL ++ +++   + P +   ++L++ 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L   G++        +M+   +  +VVT+  LID    +G +++A  LFDEMI + I+P 
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V Y  LI+G C  +++ EA+ +F  M     +P++ TYN L++G+CK   V   +E + 
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M    L  N VT+  L+ G  +  +   A   F  M   GV PNI  YN L+DG CK G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L +AM +   ++K ++ PD++TYNI+ +G+C  G++E    L   +  +G+  +V+ YN
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I G+CK+G  E+A ++  +M E G  P+  T+++LI    + G+  A+  L  EM   
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584

Query: 394 SLVPDVVVFTALIDGLSKDGNMKE 417
               D   +  + D L  DG + +
Sbjct: 585 RFAGDASTYGLVTDML-HDGRLDK 607


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 271/526 (51%), Gaps = 12/526 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +   + P   PS   F+ L+ + ++  H    L + R+++   + P +     ++
Sbjct: 56  STFNRMLHKQPP---PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N L    + D  +    +++  G   D  T+  LI   C +G + +AL+LFD+MI +G +
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    PN+  ++ L+D  CK   V  A   
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+   + PN+VT+  L+ GLCK+ E +        M    + P++F  N ++D  CK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M    + P+V TYN L+ G C   +++ A  +   M  +  +ANV++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI+GYCK   ++KA+ +  +M+ + + PN VT+++LI G C  G +  A+ L+ EMV
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD+V +  L D L K+ ++ + + L K +  +   P +   ++++ G+ + G + 
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A + F   + K       PN   Y  +I  LC  G + +ASKLFS+M  +   P++CTY
Sbjct: 473 DARDLFSNLSSKG----LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             + RG LR    L  + LL +M+  G   D     ++V    ++G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 267/547 (48%), Gaps = 10/547 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           P F  S  +T          ++EAL  + ++   +  P+    N LL  + K     ++ 
Sbjct: 31  PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M   G+  DV T  ++I+  C    V  A +   +++  G +P    +T LI GL
Sbjct: 91  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E K+ EA  +F  M   G  PN+ TY  L++G CKV + + A+     M   N QPNV
Sbjct: 151 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V F  L+D LCK  ++  A N F  M   G+ PNI  YN LI G CK        +L +E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +I PDVFT N ++  LC  G +  A  ++  M   G+  NVVTYN+L+DG+C   +
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A+ V   M  K    NV+++++LI+G CK  ++D AM L+ EM  + L P+ V +  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI GL   G +++ + L+ EM+     P + T  +L   L KN  +  A+          
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL----KAI 446

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +G    P+  +Y  I+  +C  G++  A  LFS++ S  L+P+  TY  M+ GL +   +
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
            +   L ++M K G  P+     ++ RG+  N +   A R  E L+E        +  TT
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE---ALRTIELLEEMLARGFSVDVSTT 563

Query: 585 RSFLGHL 591
              +G L
Sbjct: 564 TLLVGML 570



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 252/496 (50%), Gaps = 15/496 (3%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE------ALWVYRKIEVLPA 83
           K H    S+   ++S  IP   P V+ TL I  + + H+        AL    K+   P 
Sbjct: 84  KHHSTLLSLSRQMDSFGIP---PDVY-TLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
                 L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            M     +P VV+++ LI  LC + ++ EA ++F  M   G+ PN+ TYN+L+ G CK+ 
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +        +EM+   + P+V T   ++D LCK G +  A +    M   GV PN+  YN
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+DGHC    +  A+ +   M   +   +V +YN LI G C +  ++ A  L ++M ++
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            +  N VTYN+LI G C  G ++ A+S+  +M  +G  P++VT+ +L D  CK  ++D A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M L   +   +  PD+ ++T ++DG+ + G +++   L+  +    + P+V+T + +IHG
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K G ++ A   F E     +   CSPN   Y  I +    + + L+  +L  +M +  
Sbjct: 500 LCKQGLLAEASKLFSE----MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 504 LRPDNCTYTTMLRGLL 519
              D  T TT+L G+L
Sbjct: 556 FSVDVST-TTLLVGML 570



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 44/324 (13%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNAL 90
           V   +N +   K  P VF+  T++ A  + G + EA     + ++R +E  P +   NAL
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNAL 321

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G   + + D   + ++ MV    VA+V++Y  LI+  C    V KA+ LF+EM  + +
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL--------------- 195
            P  V Y  LIHGLC+  ++ +A S+F  M   G +P+L TY  L               
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 196 --------------------MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
                               +DG C+  ++  A + +  +    LQPNV T+ +++ GLC
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G L  A   F  M K G  PN   YN +  G  +       + L  EM     S DV 
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 296 TYNILIKGLCGVGQLEGAEGLLQK 319
           T  +L+  L   G  +  + +L K
Sbjct: 562 TTTLLVGMLSDDGLDQSVKQILCK 585


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 271/526 (51%), Gaps = 12/526 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +   + P   PS   F+ L+ + ++  H    L + R+++   + P +     ++
Sbjct: 56  STFNRMLHKQPP---PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N L    + D  +    +++  G   D  T+  LI   C +G + +AL+LFD+MI +G +
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    PN+  ++ L+D  CK   V  A   
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+   + PN+VT+  L+ GLCK+ E +        M    + P++F  N ++D  CK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M    + P+V TYN L+ G C   +++ A  +   M  +  +ANV++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI+GYCK   ++KA+ +  +M+ + + PN VT+++LI G C  G +  A+ L+ EMV
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD+V +  L D L K+ ++ + + L K +  +   P +   ++++ G+ + G + 
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A + F   + K       PN   Y  +I  LC  G + +ASKLFS+M  +   P++CTY
Sbjct: 473 DARDLFSNLSSKG----LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             + RG LR    L  + LL +M+  G   D     ++V    ++G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 267/547 (48%), Gaps = 10/547 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           P F  S  +T          ++EAL  + ++   +  P+    N LL  + K     ++ 
Sbjct: 31  PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M   G+  DV T  ++I+  C    V  A +   +++  G +P    +T LI GL
Sbjct: 91  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E K+ EA  +F  M   G  PN+ TY  L++G CKV + + A+     M   N QPNV
Sbjct: 151 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V F  L+D LCK  ++  A N F  M   G+ PNI  YN LI G CK        +L +E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +I PDVFT N ++  LC  G +  A  ++  M   G+  NVVTYN+L+DG+C   +
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A+ V   M  K    NV+++++LI+G CK  ++D AM L+ EM  + L P+ V +  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI GL   G +++ + L+ EM+     P + T  +L   L KN  +  A+          
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL----KAI 446

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +G    P+  +Y  I+  +C  G++  A  LFS++ S  L+P+  TY  M+ GL +   +
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
            +   L ++M K G  P+     ++ RG+  N +   A R  E L+E        +  TT
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE---ALRTIELLEEMLARGFSVDVSTT 563

Query: 585 RSFLGHL 591
              +G L
Sbjct: 564 TLLVGML 570



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 252/496 (50%), Gaps = 15/496 (3%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE------ALWVYRKIEVLPA 83
           K H    S+   ++S  IP   P V+ TL I  + + H+        AL    K+   P 
Sbjct: 84  KHHSTLLSLSRQMDSFGIP---PDVY-TLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
                 L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            M     +P VV+++ LI  LC + ++ EA ++F  M   G+ PN+ TYN+L+ G CK+ 
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +        +EM+   + P+V T   ++D LCK G +  A +    M   GV PN+  YN
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+DGHC    +  A+ +   M   +   +V +YN LI G C +  ++ A  L ++M ++
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            +  N VTYN+LI G C  G ++ A+S+  +M  +G  P++VT+ +L D  CK  ++D A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M L   +   +  PD+ ++T ++DG+ + G +++   L+  +    + P+V+T + +IHG
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K G ++ A   F E     +   CSPN   Y  I +    + + L+  +L  +M +  
Sbjct: 500 LCKQGLLAEASKLFSE----MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 504 LRPDNCTYTTMLRGLL 519
              D  T TT+L G+L
Sbjct: 556 FSVDVST-TTLLVGML 570



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 44/325 (13%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNAL 90
           V   +N +   K  P VF+  T++ A  + G + EA     + ++R +E  P +   NAL
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNAL 321

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G   + + D   + ++ MV    VA+V++Y  LI+  C    V KA+ LF+EM  + +
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL--------------- 195
            P  V Y  LIHGLC+  ++ +A S+F  M   G +P+L TY  L               
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 196 --------------------MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
                               +DG C+  ++  A + +  +    LQPNV T+ +++ GLC
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G L  A   F  M K G  PN   YN +  G  +       + L  EM     S DV 
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKM 320
           T  +L+  L   G  +  + +L K+
Sbjct: 562 TTTLLVGMLSDDGLDQSVKQILCKI 586


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 182/585 (31%), Positives = 290/585 (49%), Gaps = 44/585 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +FST I AF + G +E+A+ ++    K+ V P +   N L++GL K G  D  + F E+M
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ A ++TY VLI+         +A ++  E ++KG  P  V+Y  LI G C    +
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA---------------------- 208
            +A  +   M   G+ PN  T N+++ G+CK+  + +A                      
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427

Query: 209 -------------LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                        L F  EML  N++PN      L+ GLCK G+   A   +  + + G 
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N+   N LI G CK GN+ EA+ L  +M +     D  TYN LI G C  G++E    
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M K+GI  +  TYN LI G C+ G +++A+++ ++   + + PNV T+  +IDG C
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  I+    L+TE++ ++L  + VV+  LI    ++GN  E  +L+ +M    I P+  
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLIHG+   GR+ +A     E   + +G    PN V Y A+I   C  GQ+ K   +
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEM--RKEG--LLPNVVCYTALIGGYCKLGQMDKVVNV 723

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S ++ P+  TYT M+ G  ++  M     LL +M+  GIVPD V   V+  G+ +
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783

Query: 556 NGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQD 600
            G ++  F+  +++  S+ G    E   T    G  +P+    Q+
Sbjct: 784 EGKIEEGFKICDYM--SQEGLPLDEITYTTLVHGWQQPSALTNQE 826



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 219/405 (54%), Gaps = 3/405 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP  F+T+I         E AL   R++    + P       L+ GL K+GK     E +
Sbjct: 420 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             ++  G  A++VT   LI   C  G++ +A+ L  +M+++G     + Y  LI G C E
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ E   +   M + G+ P+ +TYN L+ G C++  ++ A+  ++E    +L PNV T+
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 599

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           GV++DG CK  ++      F  +    +  N  VYN LI  +C+ GN  EA  L  +M  
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P   TY+ LI G+C +G++E A+ L+ +M KEG+L NVV Y +LI GYCK G M+K
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            ++V  +M+   + PN +T++ +IDG  K+G++  A  L  EMV K +VPD V +  L +
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           G  K+G ++E  ++   M +  +     T ++L+HG  +   ++N
Sbjct: 780 GFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 234/470 (49%), Gaps = 7/470 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V++TLI  + +MG++ +AL +   +    + P     N+++ G  K G+ +      
Sbjct: 350 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 409

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM+  G   +   +  +I   C       AL    EM+ + + P   + T L+ GLC E
Sbjct: 410 EEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 469

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  +A  ++  + E G   NL T NAL+ G CK  ++  A+    +ML      + +T+
Sbjct: 470 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 529

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G CK G++         M K G+ P+ F YN LI G C+ G L EA++L +E + 
Sbjct: 530 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 589

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++ P+V+TY ++I G C   ++E  E L  ++  + +  N V YN+LI  YC+ G+  +
Sbjct: 590 RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE 649

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M  KG+ P   T+SSLI G C  G ++ A  L  EM  + L+P+VV +TALI 
Sbjct: 650 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 709

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K G M + + + +EM    I P+  T + +I G  K+G +  A     E   K    
Sbjct: 710 GYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG--- 766

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
              P+ V Y  +    C +G+I +  K+   M  + L  D  TYTT++ G
Sbjct: 767 -IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 5/182 (2%)

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+G++  +  K + P V   T L+  L K   ++++  +++ M +  ++P V+  S+ I+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAIN 254

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
              K G++ +A+  F    D    G  SPN V Y  +I  LC  G + +A +    M  D
Sbjct: 255 AFCKGGKVEDAIQLFF---DMEKLG-VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +     TY+ ++ GL++ ++  +   +L + ++ G  P+ V+   ++ GY + G+L  A
Sbjct: 311 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 370

Query: 563 FR 564
            R
Sbjct: 371 LR 372



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 8/138 (5%)

Query: 433 SVFTVSSLIH---GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +V  V  LIH     F+N    NA+  F    +K           L +++++A     ++
Sbjct: 173 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKA----NEL 228

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            K+  +F  MR   + PD   ++T +    +  ++ D + L  DM K+G+ P+ V    +
Sbjct: 229 EKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 287

Query: 550 VRGYQENGDLKSAFRCSE 567
           + G  ++G+L  AFR  E
Sbjct: 288 IHGLCKHGNLDEAFRFKE 305


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 272/544 (50%), Gaps = 46/544 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI   ++ G + +A  +++K+    V P+  A  +L++GL     FD   E + +M 
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G     VTY V+ID  C +G + +A +L  +MI+ G  P VV Y  ++ GLC   ++ 
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M   G  PN  ++N ++ G C+ + +++A + +HEM   ++ P+  ++G+L+
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNI-------------------------------- 259
           DGL K G+L  A   F  M   G+ P+                                 
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 260 ---FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
              F +N LID HCK G + EA  L   M      PDV TY+ LI GLC + +++ A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M K      VVT N+LI G CK G +++A  V   M   G  P+VVT+++L+ G C+
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG  + A  L ++MV + L P+VV +TAL+ GL K   + E   ++ +M  +   P++FT
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G    G++   L  F E          SP+HV+Y  +   LC  G+  +A ++ 
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMV----CAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 497 SDMRSDNLRPD---NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            + R ++LR +   +  Y   + GLL A +M   +  + DM++ G +P       +V G 
Sbjct: 489 REGR-ESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 554 QENG 557
            ++G
Sbjct: 548 CKSG 551



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 154/447 (34%), Positives = 229/447 (51%), Gaps = 4/447 (0%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D  +YG+LID     G +  A +LF +++  G+ P+ V YT LIHGLC  N   +A  +F
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G  P+  TYN ++D  CK   +  A +   +M+     P+VVT+  +MDGLCK 
Sbjct: 69  ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M + G  PN   +N +I G C+   + +A  +  EME  +I PD ++Y
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSY 188

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            ILI GL   G+L  A  L ++M   GI  + VTYN +I G C    +++AL +   M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG  P+  TF+ LID  CK G +D A  L   M     VPDVV ++ LI GL     + +
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L ++M++ +  P+V T ++LIHGL K GRI  A     E  D       SP+ V Y 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA----REVLDAMVSSGQSPDVVTYN 364

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++   C  GQ  +A +L SDM +  L P+  TYT ++ GL +A R+ +   + A M   
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G  P+      ++ G+   G +    +
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLK 451



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 248/494 (50%), Gaps = 7/494 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P   +   L++GL K GK +   + +++++  G+    V Y  LI   C       A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF +M  +G  P+ V Y ++I   C    + EA  + + M E G VP++ TYN +MDG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V  AL  ++EM      PN  +   ++ GLC+  ++  A   F  M    + P+ 
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y  LIDG  KAG L EA  L   M    I+P   TYN++I G+C    L+ A  L + 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G   +  T+N LID +CK G M++A  +  +MT+ G  P+VVT+S+LI G C    
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A  L  +MV +   P VV    LI GL K G +KE   +   M+ +  +P V T ++
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+HG  + G+   A       +D    G  +PN V Y A++  LC   ++ +A  +F+ M
Sbjct: 366 LVHGHCRAGQTERARELL---SDMVARGL-APNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +S    P+  TYT ++ G   A ++   + L  +M+  GI PD V+   +     ++G  
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG-- 479

Query: 560 KSAFRCSEFLKESR 573
           +SA R  E L+E R
Sbjct: 480 RSA-RALEILREGR 492



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 219/454 (48%), Gaps = 40/454 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T++    + G +EEAL ++ ++E L   P  ++ N ++ GL ++ K D   + + EM
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  +YG+LID     G + +A  LF  M+D GI P+ V Y ++IHG+C    +
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F+SMR  G  P+ +T+N L+D +CK   ++ A      M      P+VVT+  L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC +  +  A +    M K    P +   N LI G CKAG + EA  +   M     
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV TYN L+ G C  GQ E A  LL  M   G+  NVVTY +L+ G CK   + +A  
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL----- 405
           V +QM   G  PN+ T+++LI G C AG +D  + L+ EMV   + PD VV+  L     
Sbjct: 417 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 406 --------------------------------IDGLSKDGNMKETLRLYKEMLEAKITPS 433
                                           +DGL   G M+  L   ++M+     P+
Sbjct: 477 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPA 536

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
               +SL+ GL K+G+   A     E  D   GG
Sbjct: 537 PERCASLVAGLCKSGQGGEARAVLEEIMDLAYGG 570



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 194/411 (47%), Gaps = 11/411 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EV 80
            L +  K    C  VF+ + + +IP  + S +  LI   ++ G + EA  ++R++    +
Sbjct: 159 GLCQQSKIDQAC-QVFHEMEARDIPPDSWS-YGILIDGLAKAGKLNEAYKLFRRMLDSGI 216

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P+    N +++G+      D   E ++ M   G      T+ +LID  C +G + +A  
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFR 276

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L   M D G  P VV Y+ LI GLC+  ++ +A  +   M +    P + T N L+ G C
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A E    M+     P+VVT+  L+ G C+ G+   A      M   G+ PN+ 
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  L+ G CKA  L EA  + ++M+    +P++FTY  LI G C  GQ++G   L  +M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE----KGVEPNVVTFSSLIDGQCK 376
              GI  + V Y +L    CK G   +AL +  +  E    +     V  F+  +DG   
Sbjct: 457 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLD 514

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           AG ++ A+G   +MV    +P      +L+ GL K G   E   + +E+++
Sbjct: 515 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/567 (31%), Positives = 286/567 (50%), Gaps = 14/567 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV-FSTLI 59
           + + L   KL+  A  L+  +   LL+   P  V +  F  L S +  KF+ ++ F  L+
Sbjct: 102 LVHALVQNKLFWPANSLLHTL---LLRGSDPKFV-FEKF--LESHKQCKFSSTLGFDFLV 155

Query: 60  IAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            ++ +   + +A+ V R +    +LP ++  +A+LNGL++  KF  VWE ++E V  G+ 
Sbjct: 156 HSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVK 215

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D  T   +I   C   D  +A      M     + ++V Y +LIHGLC    ++EA  +
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEV 275

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            +S+RE G+  ++ TY  L+ G+C+V   +  +   +EM+     P       L+DGL K
Sbjct: 276 RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRK 335

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G + +A +  V + +FG  PN+FVYN LI+  CK  +L +A  L   M    +  +  T
Sbjct: 336 KGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+ILI   C  G L+ AE    +M ++GI   +  YNSLI+G+CK GD+  A  + ++M 
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G+EP   TF++LI G CK   ++ A  LY EM  K + P V  FTALI GL     M 
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  +L+ EM+E KI P+  T + +I G  K   +  A        D    G   P+   Y
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELL---EDMLHNGLV-PDTYTY 571

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I  LC  G++  A     D+   NL+ +   Y+ +L G     R+ + +    +MI+
Sbjct: 572 RPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQ 631

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
            GI  D V + V++ G  +  D+K  F
Sbjct: 632 RGINMDLVCHAVLIDGAMKQQDMKRLF 658



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 267/513 (52%), Gaps = 8/513 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +  S L+    + G+I+ A  +  K+     LP +   NAL+N L K    D     Y+ 
Sbjct: 324 AAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKN 383

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M    L  + VTY +LID  C +G +  A + F  MI+ GI  T+  Y  LI+G C    
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  AE ++  M   G+ P   T+  L+ GYCK   V +A + Y EM    + P+V TF  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ GLC   E+  A   F  M +  + P    YN +I+G+CKA N+ +A  L  +M    
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD +TY  LI GLC  G++  A+  +  ++K+ +  N + Y++L+ GYC +G + +AL
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S   +M ++G+  ++V  + LIDG  K  ++    GL  +M  + L PD V++T++ID  
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           SK+G+ K++      M+  K  P+V T ++ ++GL K G I  A + F    +K      
Sbjct: 684 SKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLF----EKMLTANI 739

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           SPN V Y   + +L  +G + +A+ L  +M    L  +  TY  ++RG  +  R+++   
Sbjct: 740 SPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATK 798

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +L++M + GI PD +    ++  +  +GD+ +A
Sbjct: 799 VLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 269/512 (52%), Gaps = 9/512 (1%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGL 94
           ++  ++S+ +P  N   +S LI +F + G ++ A   + R IE  +   I   N+L+NG 
Sbjct: 380 LYKNMHSMNLP-LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGH 438

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K G   +    Y +M+  GL     T+  LI   C    V KA  L+ EM +K I P+V
Sbjct: 439 CKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSV 498

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             +T LI+GLC+ N+M EA  +F  M E  + P   TYN +++GYCK  ++++A E   +
Sbjct: 499 YTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLED 558

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           MLH+ L P+  T+  L+ GLC  G + AA +F   + K  +  N   Y+ L+ G+C  G 
Sbjct: 559 MLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGR 618

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+S   EM +  I+ D+  + +LI G      ++   GLL+KMY +G+  + V Y S
Sbjct: 619 LTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTS 678

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +ID Y KEG  +K+      M  +   PNVVT+++ ++G CK G ID A  L+ +M+  +
Sbjct: 679 MIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN 738

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P+ V +   +D L+K+GNMKE   L+ EML+  +  +  T + LI G  K GR+  A 
Sbjct: 739 ISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTA-TYNILIRGFCKLGRLIEAT 797

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
               E T+  +G +  P+ + Y+ II   C  G +  A +L+  M    + PD+  +  +
Sbjct: 798 KVLSEMTE--NGIF--PDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           + G      +     L  DM+  G+ P  ++ 
Sbjct: 854 IYGCCVNGALDKAFELRNDMLSRGLKPRQILQ 885



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 210/438 (47%), Gaps = 22/438 (5%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY-----RKIEVLPAIQACN 88
           + ++  +N  EI    PSV  F+ LI        + EA  ++     RKI+  P     N
Sbjct: 483 FKLYREMNEKEIA---PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIK--PTEVTYN 537

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            ++ G  K    D  +E  E+M+  GLV D  TY  LI   C  G V  A +  D++  K
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            ++   + Y+ L+HG C + ++ EA S    M + G+  +L  +  L+DG  K  D+ R 
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
                +M    L+P+ V +  ++D   K G  + +G     M     FPN+  Y   ++G
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK G +  A  L  +M    ISP+  TY   +  L   G ++ A  L  +M K G+LAN
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLAN 776

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
             TYN LI G+CK G + +A  V S+MTE G+ P+ +T+S++I   C++G++ AA+ L+ 
Sbjct: 777 TATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWD 836

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF---------TVSS 439
            M+ K + PD V F  LI G   +G + +   L  +ML   + P              + 
Sbjct: 837 TMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNF 896

Query: 440 LIHGLFKNGRISNALNFF 457
           L+HG    G +  AL  +
Sbjct: 897 LMHGGCVTGEVDTALRLY 914



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 187/451 (41%), Gaps = 35/451 (7%)

Query: 134 DVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           D   AL  F+ + + K +  T   + IL+H L        A S+  ++   G  P  + +
Sbjct: 75  DSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPK-FVF 133

Query: 193 NALMDGY--CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG---LCKVGELRAAGNFF 247
              ++ +  CK +         H  L +    + V    LM G   L +V  L A  N  
Sbjct: 134 EKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGL 193

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           + + KF +   +F      D    AG                + PD +T + +I+ LC +
Sbjct: 194 LRIRKFILVWEVF------DESVNAG----------------VKPDPYTCSAVIRSLCEL 231

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
                A+  +  M       ++VTYN LI G CK G + +AL V   + EKG++ +VVT+
Sbjct: 232 KDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTY 291

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            +L+ G C+    D  + L  EMV    VP     + L+DGL K GN+     L  ++  
Sbjct: 292 CTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGR 351

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP-NHVLYAAIIQALCYD 486
               P++F  ++LI+ L K   +  A     E   K       P N V Y+ +I + C  
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKA-----ELLYKNMHSMNLPLNDVTYSILIDSFCKR 406

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G +  A   F  M  D +R     Y +++ G  +   +     L   MI  G+ P A   
Sbjct: 407 GMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTF 466

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             ++ GY ++  ++ AF+    + E  I  S
Sbjct: 467 TTLISGYCKDLQVEKAFKLYREMNEKEIAPS 497



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 11/177 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           N   +   + + ++ G+++EA  ++ ++   +L      N L+ G  K G+     +   
Sbjct: 742 NSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLS 801

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G+  D +TY  +I   C  GDV  A+ L+D M+ KG+EP  V + +LI+G C   
Sbjct: 802 EMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNG 861

Query: 169 KMVEAESMFRSMRECGVVP---------NLYTYNALMDGYCKVADVNRALEFYHEML 216
            + +A  +   M   G+ P         +L   N LM G C   +V+ AL  YH ML
Sbjct: 862 ALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSML 918


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 179/598 (29%), Positives = 295/598 (49%), Gaps = 24/598 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV---FST 57
           I  +LA   L ++A C+++ V    +++         V + ++S E+    PSV      
Sbjct: 87  ILDILARNGLMRSAYCVMEKVVSVKMEN--------GVIDVVSSSEVSM--PSVKLILDL 136

Query: 58  LIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEFYEEMVLC 113
           L+  + +   +E+ L V+ K+    +LP ++ CN +L  L  +    D   E Y  MV C
Sbjct: 137 LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVEC 196

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+   VVTY  ++D  C +G V +AL L  +M   G  P  V Y +L++GL +  +M +A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           + + + M   G+  ++YTY+ L+ GYC+   +  A     EML     P VVT+  +M G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCK G +  A      M    + P++  YN LI G+ + GN+ EA  L +E+    ++P 
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TYN LI GLC +G L+ A  L  +M K G   +V T+ + + G+CK G++  A  +  
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  +G++P+   + + I G+ K G+   A G+  EM+ +   PD++ +   IDGL K G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           N+KE   L K+ML   + P   T +S+IH     G +  A   FLE   K       P+ 
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKG----IFPSV 552

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  +I +    G++  A   F +M    + P+  TY  ++ GL + ++M       A+
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           M   GI P+     +++      G  + A R  + + +  I   + +  T RS L HL
Sbjct: 613 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI---QPDSCTHRSLLKHL 667



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 233/474 (49%), Gaps = 75/474 (15%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++T++ +F + G ++EAL +  +++ +   P     N L+NGL   G+ +   E 
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            ++M+  GL   V TY  LI   C +G + +A  L +EM+ +G  PTVV Y  +++GLC 
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ +A  +   M    ++P+L +YN L+ GY ++ ++  A   + E+ + +L P+VVT
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM- 285
           +  L+DGLC++G+L  A      M K G  P++F +   + G CK GNL  A  L  EM 
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439

Query: 286 ------EKFE----------------------------ISPDVFTYNILIKGLCGVGQLE 311
                 ++F                               PD+ TYN+ I GL  +G L+
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499

Query: 312 GAEGLLQKMY-----------------------------------KEGILANVVTYNSLI 336
            A  L++KM                                     +GI  +VVTY  LI
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLI 559

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             Y   G ++ A+    +M EKGV PNV+T+++LI+G CK   +D A   + EM  K + 
Sbjct: 560 HSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGIS 619

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           P+   +T LI+     G+ +E LRLYK+ML+ +I P   T  SL+  L K+ ++
Sbjct: 620 PNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL 673


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 167/596 (28%), Positives = 296/596 (49%), Gaps = 42/596 (7%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A+LY+NA+ ++K +++  + S+       SVF AL N+  + K NPSVF  LI  
Sbjct: 55  HILVRARLYENAKSILKHLSQMGVGSK-------SVFGALMNTYPLCKSNPSVFDLLIRV 107

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G + +AL  +R + +    P++  CN LL  L+K+ K  +VW F++EM+   +  D
Sbjct: 108 YLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPD 167

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G + KA  L  +M + G  P+VV Y  +++  C + +   A  +  
Sbjct: 168 VSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELID 227

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+  +  TYN L+D  CK     +      +M    + PN +T+  +++G  K G
Sbjct: 228 QMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEG 287

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++ AA   F  M+   + PN   YN LIDGHC  GN  +A+++   ME     P+  +Y+
Sbjct: 288 KIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYS 347

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GLC   + E ++ +L++M   G++   + Y ++IDG C+ G + +++ +  +M + 
Sbjct: 348 ALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKD 407

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           GV P+VVTFS LI+G C+ G I     +  +M    L P+ +++T LI    K G++ E 
Sbjct: 408 GVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEA 467

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------DKTDGG 467
            ++Y  M       + F  + L+  L K+G++  A  FF   +           D    G
Sbjct: 468 FKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIING 527

Query: 468 YCS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           Y +                    P+H  Y  +++ALC  G+  +A +L   +       D
Sbjct: 528 YGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVD 587

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             TY T+L    ++  + D + L  +M++  ++PD+    ++  G    G + +A 
Sbjct: 588 TVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAAL 643



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 242/496 (48%), Gaps = 11/496 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  + P     N+++NG +K+GK  +    ++EM +  L+ + VTY  LID  C  G+ 
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL + + M   G +P  V Y+ L++GLC   K   ++S+   MR  G++     Y A+
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG C+   +N +++   +ML   + P+VVTF VL++G C+VG+++        M K G+
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI  +CK G++ EA  +   M +     + F  N+L+  LC  G++  AE 
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
               M K G + N +T++ +I+GY   G+  KA S+  +M + G  P+  T+  L+   C
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +AG    A  L  ++       D V +  ++    K G + + + L+ EM++  + P  +
Sbjct: 565 RAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + +  GL + G++  AL+F+     K   G  SP  V+Y   +  L   GQ   A   
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGK---GAVSPEKVMYTTFVDGLFRAGQSKAALYF 681

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRML---DVMMLLADMIKMGIVPDAVINQVMVRG 552
             DM  + L  D      +L G  R  +M    D+  ++   I   I P      +++ G
Sbjct: 682 CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGIT--ISPSLATYNILLHG 739

Query: 553 YQENGDLKSAFRCSEF 568
           Y +  +L    +CS  
Sbjct: 740 YAKKKNLS---KCSNL 752



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 272/599 (45%), Gaps = 71/599 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI      G+ E+AL +   +E     P   + +ALLNGL +  KF+      
Sbjct: 307 NCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSIL 366

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M + G++   + Y  +ID  C  G + +++ L D+M+  G+ P VV +++LI+G C  
Sbjct: 367 ERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRV 426

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+   + +   M + G+ PN   Y  L+  YCK  DV  A + Y  M       N    
Sbjct: 427 GKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFIC 486

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK G++  A  FF HM+K G  PN   ++C+I+G+  +GN  +A S+  EM K
Sbjct: 487 NVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P  FTY  L+K LC  G+ + A+ LL K++      + VTYN+++    K G +  
Sbjct: 547 AGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTD 606

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALI 406
           A+++  +M ++ V P+  T++ +  G  + G + AA+  Y  ++ K  V P+ V++T  +
Sbjct: 607 AVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFV 666

Query: 407 DGLSKDGNMKETLRLYKEMLE-----------------------AK-------------I 430
           DGL + G  K  L   ++M +                       AK             I
Sbjct: 667 DGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITI 726

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFF--LEKT----DKTDG-----GYCSP-------- 471
           +PS+ T + L+HG  K   +S   N +  + +T    DK        G+C          
Sbjct: 727 SPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLK 786

Query: 472 ------------NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                       +   +  +I   C   ++ KA  L + M   ++ PD  T+ +++  L 
Sbjct: 787 LLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLS 846

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           R   + +  +LL +M++ G +PD      +V      G +  AF+  + ++   I S +
Sbjct: 847 RVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 244/522 (46%), Gaps = 9/522 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++TLI  + + G + EA  VY    +I        CN L++ L K GK      F+
Sbjct: 447 NSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFF 506

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G V + +T+  +I+     G+ +KA ++FDEMI  G  P+   Y  L+  LC  
Sbjct: 507 HHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRA 566

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EA+ +   +       +  TYN ++    K   +  A+  + EM+  N+ P+  T+
Sbjct: 567 GKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTY 626

Query: 228 GVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            ++  GL + G++ AA +F+ ++  K  V P   +Y   +DG  +AG    A+  C +ME
Sbjct: 627 AIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDME 686

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDM 345
           K  +  D+   N+++ G   +G++  A  +   M+    I  ++ TYN L+ GY K+ ++
Sbjct: 687 KNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNL 746

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            K  ++ + M   G+ P+ +T  SLI G CK+  +D  + L  +M++  +  D   F  L
Sbjct: 747 SKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNML 806

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I    +   + +   L   M    I P + T  S+I  L    R+S      L   +  +
Sbjct: 807 IMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL---SRVSTVQESHLLLHEMLE 863

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G C P+   Y A++  +C  G I  A KL  +M +  +   +   + ++RGL +  ++ 
Sbjct: 864 RG-CIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVE 922

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           +  ++L  M++  ++P       ++  +  N  L  A +  +
Sbjct: 923 EAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKD 964



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 212/475 (44%), Gaps = 41/475 (8%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P+      LL  L + GKF       +++       D VTY  ++      G +  A+ L
Sbjct: 551  PSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVAL 610

Query: 142  FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYC 200
            FDEM+ + + P    Y I+  GL    KMV A   + ++   G V P    Y   +DG  
Sbjct: 611  FDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLF 670

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNI 259
            +      AL F  +M  + L  +++   V+++G  ++G++  AG+ F  M +   + P++
Sbjct: 671  RAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSL 730

Query: 260  FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
              YN L+ G+ K  NL +  +L + M +  I PD  T + LI G C    L+    LL+K
Sbjct: 731  ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790

Query: 320  MYKEGILANVVTYNSLIDGYCKEGDMEKA----------------------LSVCS---- 353
            M  +G+  +  T+N LI  YC+  ++ KA                      +SV S    
Sbjct: 791  MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850

Query: 354  ---------QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
                     +M E+G  P+   + +L++  C+ G+I  A  L  EM    +    V  +A
Sbjct: 851  VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESA 910

Query: 405  LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            L+ GL+K G ++E   +   ML   + P++ T ++L+H   +N  +  AL       D  
Sbjct: 911  LVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKL----KDTM 966

Query: 465  DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
            D      + + Y  +I  LC DG +  A KL+ +++   L P+  TY  ++  + 
Sbjct: 967  DFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 215/453 (47%), Gaps = 10/453 (2%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++T+++   + G + +A+ ++ ++    VLP       +  GLI++GK  +   FY  +
Sbjct: 590  TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649

Query: 111  VLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            +  G V+ + V Y   +D     G    AL   ++M   G+   ++   ++++G     K
Sbjct: 650  LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709

Query: 170  MVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            M +A  +F  M     + P+L TYN L+ GY K  ++++    Y+ M+   + P+ +T  
Sbjct: 710  MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769

Query: 229  VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
             L+ G CK   L         M   GV  +   +N LI  +C+   + +A  L + M  F
Sbjct: 770  SLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829

Query: 289  EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            +I PD+ T++ +I  L  V  ++ +  LL +M + G + +   Y +L++  C+ G +  A
Sbjct: 830  DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889

Query: 349  LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
              +  +M   G+    V  S+L+ G  K G ++ A  +   M+ KSL+P +  FT L+  
Sbjct: 890  FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHM 949

Query: 409  LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
              ++ ++ E L+L   M    +   V   + LI GL  +G +++AL  +  K  K  G +
Sbjct: 950  FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY--KEIKQRGLW 1007

Query: 469  CSPNHVLYAAIIQAL-CYDGQILKASKLFSDMR 500
              PN   Y  +I A+   D  + K   L  D++
Sbjct: 1008 --PNMTTYCILIDAIFTNDISLAKGEVLLKDLQ 1038



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 4/246 (1%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +N   ++ LI  Y +EG +  AL     M  +G  P+V T + L+    K   + A    
Sbjct: 96  SNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + EM+ + + PDV  F  LI+ L  +G +K+   L K+M E+   PSV T +++++   K
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR   AL    E  D+        +   Y  ++  LC + +  K   L   MR   + P
Sbjct: 216 KGRYKAAL----ELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISP 271

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +  TY +++ G ++  ++     +  +M  + ++P+ V    ++ G+  +G+ + A    
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331

Query: 567 EFLKES 572
           E ++ +
Sbjct: 332 EMMEAT 337



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 4/178 (2%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           VF  LI    ++G + + L  ++ M      PSV+T + L+  L K  ++     FF E 
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             +       P+   +  +I  LC +G++ KA  L   M      P   TY T+L    +
Sbjct: 160 LARR----VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
             R    + L+  M   GI  DA    ++V    +N      +   + +++  I  +E
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 258/477 (54%), Gaps = 4/477 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     +L  L+K   F +     ++M + G+  D+VT  +LI+C C  G +  + ++
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P  +I T L+ GLC + ++ ++      +   G   N  +Y  L++G CK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   A++    +   + +P+VV +  ++DGLCK   +  A +F+  M   G+FP++  
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C AG L  A SL +EM    I+PDV+TY ILI  LC  G+L+ A+ LL  M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           KEG+  NVVTY++L+DGYC  G++  A  +   M +  V P+V +++ +I+G CK  ++D
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L  EM+ K++VP+ V + +LIDGL K G +   L L KE+        V T +SL+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL KN  +  A+  F++  ++       PN   Y A+I  LC   ++  A KLF  +  
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERG----IQPNKYTYTALIDGLCKGARLKNAQKLFQHILV 545

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
                D  TY  M+ GL +   + + + + + M   G +PDAV  ++++R   E  +
Sbjct: 546 KGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDE 602



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/466 (33%), Positives = 249/466 (53%), Gaps = 9/466 (1%)

Query: 44  SLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+    P +   S LI  F  +G +  +  V  KI  L   P       L+ GL  KG
Sbjct: 157 QMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +      F++++V  G   + V+YG L++  C  G+   A+ L   + D+   P VV+Y 
Sbjct: 217 EVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYN 276

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +I GLC +  + EA   +  M   G+ P++ TY+ L+ G+C    +  A    +EM   
Sbjct: 277 TIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK 336

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ P+V T+ +L+D LCK G+L+ A N    M K GV PN+  Y+ L+DG+C  G +  A
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNA 396

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   M + E++P V +YNI+I GLC    ++ A  LL++M  + ++ N VTYNSLIDG
Sbjct: 397 KQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG 456

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G +  AL +  ++  +G   +V+T++SL+DG CK  N+D A+ L+ +M  + + P+
Sbjct: 457 LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPN 516

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              +TALIDGL K   +K   +L++ +L       V+T + +I GL K G +  AL    
Sbjct: 517 KYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM-- 574

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+   D G C P+ V +  II++L    +  KA KL  +M +  L
Sbjct: 575 -KSKMEDNG-CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 200/386 (51%), Gaps = 38/386 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   + TL+    ++G    A+ + R IE     P +   N +++GL K    +  ++
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           FY EM   G+  DV+TY  LI   C  G +M A +L +EM  K I P V  YTILI  LC
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH------------ 213
            E K+ EA+++   M + GV PN+ TY+ LMDGYC V +V+ A + +H            
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 214 -----------------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
                                  EMLH N+ PN VT+  L+DGLCK G + +A +    +
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G   ++  Y  L+DG CK  NL +A++L  +M++  I P+ +TY  LI GLC   +L
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+ L Q +  +G   +V TYN +I G CKEG +++AL++ S+M + G  P+ VTF  +
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV 396
           I    +    D A  L  EM+ K L+
Sbjct: 594 IRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 219/464 (47%), Gaps = 39/464 (8%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A++ F+ M+     P+++ +  ++  L        A S+ + M   G+ P+L T + 
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++ +C +  +  +     ++L    QPN +    LM GLC  GE++ + +F   +   G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              N   Y  L++G CK G    A+ L   +E     PDV  YN +I GLC    +  A 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 315 GLLQKMYKEGILANVVTYNSL-----------------------------------IDGY 339
               +M   GI  +V+TY++L                                   ID  
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CKEG +++A ++   MT++GV+PNVVT+S+L+DG C  G +  A  ++  MV   + P V
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             +  +I+GL K  ++ E + L +EML   + P+  T +SLI GL K+GRI++AL+   E
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              +        + + Y +++  LC +  + KA  LF  M+   ++P+  TYT ++ GL 
Sbjct: 473 LHHRGQPA----DVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLC 528

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +  R+ +   L   ++  G   D     VM+ G  + G L  A 
Sbjct: 529 KGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 219/466 (46%), Gaps = 20/466 (4%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG----LCNENK 169
           G+V ++VT  +LI+C    G +  + ++  +++  G +P  +  T L+ G         +
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 170 MVE----------AESMFRSMRECGVVPNLYTYNALMDGY-CKVAD-VNRALEFYHEMLH 217
           M+E          + S+  S+          T+          + D V+ A+  ++ ML 
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               P+++ FG ++  L K+     A +    M   G+ P++   + LI+  C  G +  
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           + S+  ++ K    P+      L+KGLC  G+++ +     K+  +G   N V+Y +L++
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G CK G+   A+ +   + ++   P+VV ++++IDG CK   ++ A   YTEM  + + P
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           DV+ ++ LI G    G +     L  EM    I P V+T + LI  L K G++  A N  
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
              T +       PN V Y+ ++   C  G++  A ++F  M    + P  C+Y  M+ G
Sbjct: 366 GVMTKEG----VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMING 421

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L + K + + M LL +M+   +VP+ V    ++ G  ++G + SA 
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S F  M      P++  +  ++    K+     A+    +M    ++P++VT  +L+
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILI 174

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C +G++  + +    + K G  PN  +   L+ G C  G + +++    ++      
Sbjct: 175 NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQ 234

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            +  +Y  L+ GLC +G+   A  LL+ +       +VV YN++IDG CK+  + +A   
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDF 294

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            ++M  +G+ P+V+T+S+LI G C AG +  A  L  EM +K++ PDV  +T LID L K
Sbjct: 295 YTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK 354

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD-KTDGGYCS 470
           +G +KE   L   M +  + P+V T S+L+ G    G + NA   F      + +   CS
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCS 414

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                Y  +I  LC    + +A  L  +M   N+ P+  TY +++ GL ++ R+   + L
Sbjct: 415 -----YNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + ++   G   D +    ++ G  +N +L  A      +KE  I
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 191/415 (46%), Gaps = 30/415 (7%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+VPNL T + L++    +  +  +     ++L    QPN +T   LM G     E R A
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETRCA 60

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDG-----------------HCKAGNLFE----AMSLC 282
                 +      P +++ + L                    H +  ++ +    A+S  
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           + M     +P +  +  ++  L  +     A  L ++M  +GI  ++VT + LI+ +C  
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G M  + SV  ++ + G +PN +  ++L+ G C  G +  ++  + ++V +    + V +
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             L++GL K G  +  ++L + + +    P V   +++I GL K+  ++ A +F+ E   
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +  G +  P+ + Y+ +I   C  GQ++ A  L ++M   N+ PD  TYT ++  L +  
Sbjct: 301 R--GIF--PDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++ +   LL  M K G+ P+ V    ++ GY   G++ +A +    + ++ +  S
Sbjct: 357 KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 254/493 (51%), Gaps = 4/493 (0%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           EA  + R+  V  +I ACN LL GL++ G  D  WE Y E+V  G+  +V T  ++++  
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C        +    +M  KG+   +V Y  LI+  C E  + EA  +  S    G+ P L
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TYNA++ G CK+   +RA +   EML   L PN  T+  L+  +C+   +  A   F  
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M++ GV P++  ++ LI    + G+L++A+    EME+  I PD   Y ILI G C  G 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L  A  +  +M   G   +VVTYN+ ++G CK+     A  + ++M E+G+ P+  TF++
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G CK GN+D A+ L+  MV  +L PD V +  LIDG  K G M     L+ +M+   
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P   +  ++++G   +G +  ALN   +  +K       PN V    +I+  C  G +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG----IRPNLVTCNTLIKGYCRSGDM 623

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            KA +  S M S+ + PD+ +Y T++ G L+   +    +L+ +M K G+  + +   ++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683

Query: 550 VRGYQENGDLKSA 562
           + G+   G ++ A
Sbjct: 684 LNGFCAEGKMQEA 696



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 220/385 (57%), Gaps = 3/385 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++TL++      +I EA  ++ ++    VLP + + ++L+  L + G        +
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+V D V Y +LID  C  G +  AL + DEM+ +G    VV Y   ++GLC +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               +A+ +F  M E G+VP+ YT+  L+ GYCK  ++++AL  +  M+  NL+P+ VT+
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK GE+  A   +  M +  + P+   Y  +++G C +G L EA++LC +M +
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P++ T N LIKG C  G +  A   L KM   GI+ +  +YN+LIDGY KE ++EK
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++M ++G++ N++T++ +++G C  G +  A  +  +M+   + PD   +++LI+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 408 GLSKDGNMKETLRLYKEMLEAKITP 432
           G     NMKE  R + EML+  + P
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 220/441 (49%), Gaps = 38/441 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +        + P +   NA+L GL K GK+D   +   EM
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  +  TY  L+   C + ++++A  +FDEM  +G+ P +V ++ LI  L     +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE-------------------- 210
            +A   FR M   G+VP+   Y  L+DG+C+   ++ AL+                    
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473

Query: 211 ---------------FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                           ++EM+   + P+  TF  L+ G CK G +  A N F  M +  +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YN LIDG CKAG +  A  L  +M + +I PD  +Y  ++ G C  G L  A  
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M ++GI  N+VT N+LI GYC+ GDM KA    S+M   G+ P+  ++++LIDG  
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K  N++ A  L  EM  + L  +++ +  +++G   +G M+E  ++ ++M+E  I P   
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 436 TVSSLIHGLFKNGRISNALNF 456
           T SSLI+G      +  A  F
Sbjct: 714 TYSSLINGHVSQDNMKEAFRF 734



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+LI   +  GH+ +AL  +R++E   ++P       L++G  + G      +  +EM+
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DVVTY   ++  C +     A  LF+EM+++G+ P    +T LI G C +  M 
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F +M    + P+  TYN L+DG+CK  ++ RA E + +M+  ++ P+ +++G ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G C  G L  A N    M + G+ PN+   N LI G+C++G++ +A    S+M    I 
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F+YN LI G      LE A  L+ +M K G+  N++TYN +++G+C EG M++A  V
Sbjct: 640 PDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQV 699

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             +M E G+ P+  T+SSLI+G     N+  A   + EM+ + LVPD
Sbjct: 700 LRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +IY +L+       K+ E    F+ +R  GV  ++   N L+ G  +   V+ A E Y E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   ++ NV T  ++++ LCK  +      F   M   GVF +I  YN LI+ +C+ G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L +      + P + TYN ++ GLC +G+ + A+ +L +M + G+  N  TYN+
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  ++ +A  +  +M+ +GV P++V+FSSLI    + G++  A+  + EM    
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +VPD V++T LIDG  ++G + + L++  EML       V T ++ ++GL K    ++A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E  ++       P+   +  +I+  C DG + KA  LF  M   NL+PD  TY T+
Sbjct: 488 MLFNEMVERG----MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
           + G  +A  M     L  DMI+  I+PD +    ++ G+  +G L  A   C + L++
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 288/567 (50%), Gaps = 14/567 (2%)

Query: 12  KNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF-SEMGHIEE 70
           + AR LI+ +         P H+ Y++F    SL      P +FS ++++  SE   + E
Sbjct: 77  ETARRLIRSMLLPKSPFSSPSHL-YTLF----SLSSTPMKP-LFSDMLLSICSESKMVSE 130

Query: 71  ALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
           +  +Y   +K  VLP++ + N  L  L+   +++   + + E+V  GL  D   YG  I 
Sbjct: 131 SAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQ 190

Query: 128 CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
                GD+ +A+ L   M   G+ P V +Y ++I GLC E +M +AE +F  M +  V P
Sbjct: 191 AAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAP 250

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N  TYN L+DGYCKV  +  A      M   N++P ++TF  L++GLC+   +  A    
Sbjct: 251 NRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVL 310

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M  +G  P+ F Y  L DGH K GN+  +++L  E  +  +    +T +IL+  LC  
Sbjct: 311 EEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKE 370

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G +E AE +L+K  + G+    V +N++++GYC+ GD+ KA +   +M   G+ PN VT+
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +SL+   C+  N++ A     +MV K ++P+V  +  LIDG  +        ++ +EM +
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P+V +   LI+ L K+  I  A        D    G   PN  +Y  +I   C  G
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVIL---GDMVHRGVV-PNAQIYNMLIDGSCIAG 546

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++  A + F +M +  + P   TY  ++ GL +  ++++   L +++ + G+  D +   
Sbjct: 547 KLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYN 606

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRI 574
            ++ GY   G+++ A    E +K+S I
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGI 633



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 262/517 (50%), Gaps = 10/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + ++G +EEA  +  +++V    P I   N+LLNGL +    +      
Sbjct: 251 NRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVL 310

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM + G V D  TY  L D     G+V  ++ L +E + KG++      +IL++ LC E
Sbjct: 311 EEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKE 370

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M +AE + +   E G+ P    +N +++GYC+V D+N+A     +M    L+PN VT+
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+   C++  +  A      M + GV PN+  YN LIDG+ ++        +  EMEK
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P+V +Y  LI  LC    +  AE +L  M   G++ N   YN LIDG C  G ++ 
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     +M  + + P +VT++ LI+G CK G +  A  L +E+  K L  DV+ + +LI 
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-DKTDG 466
           G S  GN+++ L LY+ M ++ I P++ T   LI G  K G +       +EK   +   
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV------LVEKIYQEMLQ 664

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ V+Y A+I      G + KA  L S M +  ++PD  TY  ++ G  +  RM  
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           V  L+ DM   G++P      +++ G+ +  D   A+
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAY 761



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 226/488 (46%), Gaps = 78/488 (15%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALW-----VYRKIEVLPAIQACNALLNGL 94
           L  +E+  F P  F+  TL     + G+++ ++      V + +++L     C+ LLN L
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDY--TCSILLNAL 367

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K+G  +   E  ++ +  GL    V +  +++  C  GD+ KA    ++M   G+ P  
Sbjct: 368 CKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNH 427

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V Y  L+   C    M EAE   + M E GV+PN+ TYN L+DGY +    +R  +   E
Sbjct: 428 VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEE 487

Query: 215 MLHHNLQPNVVTFG-----------------------------------VLMDGLCKVGE 239
           M    L+PNV+++G                                   +L+DG C  G+
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L+ A  FF  M    + P +  YN LI+G CK G + EA +L SE+ +  +S DV TYN 
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607

Query: 300 LIKGLCGVGQLE----------------------------GAEG--LLQKMYKEGILANV 329
           LI G    G ++                            G EG  L++K+Y+E +  N+
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNL 667

Query: 330 VT----YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           V     YN+LI  Y + GD++KA S+ S M  +G++P+ +T++ LI G  K G +     
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  +M I+ L+P    +  LI G  K  +       Y+EM E   TPSV    +LI GL 
Sbjct: 728 LVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLR 787

Query: 446 KNGRISNA 453
           + GR  +A
Sbjct: 788 EEGRSHDA 795


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 254/493 (51%), Gaps = 4/493 (0%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           EA  + R+  V  +I ACN LL GL++ G  D  WE Y E+V  G+  +V T  ++++  
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C        +    +M  KG+   +V Y  LI+  C E  + EA  +  S    G+ P L
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TYNA++ G CK+   +RA +   EML   L PN  T+  L+  +C+   +  A   F  
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M++ GV P++  ++ LI    + G+L++A+    EME+  I PD   Y ILI G C  G 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L  A  +  +M   G   +VVTYN+ ++G CK+     A  + ++M E+G+ P+  TF++
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G CK GN+D A+ L+  MV  +L PD V +  LIDG  K G M     L+ +M+   
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P   +  ++++G   +G +  ALN   +  +K       PN V    +I+  C  G +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG----IRPNLVTCNTLIKGYCRSGDM 623

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            KA +  S M S+ + PD+ +Y T++ G L+   +    +L+ +M K G+  + +   ++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683

Query: 550 VRGYQENGDLKSA 562
           + G+   G ++ A
Sbjct: 684 LNGFCAEGKMQEA 696



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 220/385 (57%), Gaps = 3/385 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++TL++      +I EA  ++ ++    VLP + + ++L+  L + G        +
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+V D V Y +LID  C  G +  AL + DEM+ +G    VV Y   ++GLC +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               +A+ +F  M E G+VP+ YT+  L+ GYCK  ++++AL  +  M+  NL+P+ VT+
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK GE+  A   +  M +  + P+   Y  +++G C +G L EA++LC +M +
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P++ T N LIKG C  G +  A   L KM   GI+ +  +YN+LIDGY KE ++EK
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++M ++G++ N++T++ +++G C  G +  A  +  +M+   + PD   +++LI+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 408 GLSKDGNMKETLRLYKEMLEAKITP 432
           G     NMKE  R + EML+  + P
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 220/441 (49%), Gaps = 38/441 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +        + P +   NA+L GL K GK+D   +   EM
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  +  TY  L+   C + ++++A  +FDEM  +G+ P +V ++ LI  L     +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE-------------------- 210
            +A   FR M   G+VP+   Y  L+DG+C+   ++ AL+                    
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473

Query: 211 ---------------FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                           ++EM+   + P+  TF  L+ G CK G +  A N F  M +  +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YN LIDG CKAG +  A  L  +M + +I PD  +Y  ++ G C  G L  A  
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M ++GI  N+VT N+LI GYC+ GDM KA    S+M   G+ P+  ++++LIDG  
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K  N++ A  L  EM  + L  +++ +  +++G   +G M+E  ++ ++M+E  I P   
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 436 TVSSLIHGLFKNGRISNALNF 456
           T SSLI+G      +  A  F
Sbjct: 714 TYSSLINGHVSQDNMKEAFRF 734



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+LI   +  GH+ +AL  +R++E   ++P       L++G  + G      +  +EM+
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DVVTY   ++  C +     A  LF+EM+++G+ P    +T LI G C +  M 
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F +M    + P+  TYN L+DG+CK  ++ RA E + +M+  ++ P+ +++G ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G C  G L  A N    M + G+ PN+   N LI G+C++G++ +A    S+M    I 
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F+YN LI G      LE A  L+ +M K G+  N++TYN +++G+C EG M++A  V
Sbjct: 640 PDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQV 699

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             +M E G+ P+  T+SSLI+G     N+  A   + EM+ + LVPD
Sbjct: 700 LRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +IY +L+       K+ E    F+ +R  GV  ++   N L+ G  +   V+ A E Y E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ++   ++ NV T  ++++ LCK  +      F   M   GVF +I  YN LI+ +C+ G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L +      + P + TYN ++ GLC +G+ + A+ +L +M + G+  N  TYN+
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   C+  ++ +A  +  +M+ +GV P++V+FSSLI    + G++  A+  + EM    
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +VPD V++T LIDG  ++G + + L++  EML       V T ++ ++GL K    ++A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E  ++       P+   +  +I+  C DG + KA  LF  M   NL+PD  TY T+
Sbjct: 488 MLFNEMVERG----MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
           + G  +A  M     L  DMI+  I+PD +    ++ G+  +G L  A   C + L++
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 252/492 (51%), Gaps = 7/492 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +   LI  +S+   +E+ L V+ K+    + P ++ CN +L  L  K       E Y  M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+   +VTY  L+D  C  G V + L+L  EM  +G  P  V Y +LI+GL  + + 
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 285

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A+ +   M + G+  + YTYN L+ GY     +  AL    EM+     P V T+   
Sbjct: 286 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSF 345

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK+G +  A      M    + P++  YN LI G+C+ GNL +A  L  E+    +
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYL 405

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P + TYN L+ GLC  G+LE A+ L  +M  EGI  ++VTY  L++G CK G +  A  
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M  +G+E +   +++ I G+ K G+   A  L  EM+ K   PD++++  ++DGL 
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN++E   L ++M+   + P   T +S+IH   +NGR+      F E   K      +
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG----LT 581

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  +I      G++ +A   FS+M+   + P+  TY +++ GL + +RM      
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 531 LADMIKMGIVPD 542
            A+M++ GI P+
Sbjct: 642 FAEMVEKGIFPN 653



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 245/468 (52%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+ ++ + G +++ L +  +++     P     N L+NGL KKG+F+       EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL     TY  LI     +G + +AL+L +EM+ KG  PTV  Y   I+GLC   +M
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A      M    ++P++ +YN L+ GYC++ ++ +A   + E+    L P +VT+  L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLC+ GEL  A    V M   G+ P+I  Y  L++G CK G+L  A     EM    +
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D + Y   I G   +G    A  L ++M  +G   +++ YN ++DG CK G++E+A  
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   GV P+ VT++S+I    + G +     ++ EM+ K L P VV +T LI G +
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G ++     + EM E  I P+V T +SLI+GL K  R+  A NFF E  +K       
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG----IF 651

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           PN   Y  +I   C  G   +A  L+  M    ++PD+CT++ +L+ L
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/531 (30%), Positives = 266/531 (50%), Gaps = 24/531 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN----ALLNGLIKKGKFDSVWEF 106
           +P +F  ++ +F     +  AL ++R  E  P  +       A+L  L +     S +  
Sbjct: 80  DPDLFVRVLSSFRTSPRM--ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWV 137

Query: 107 YEEMVLCGL--VADVVTYG------------VLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            E ++   +  + DV+  G            +LI     +  V + L++FD+MI   + P
Sbjct: 138 MERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSP 197

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V     ++  L +++ M +A  ++R+M E G+ P + TYN L+D YCK   V + L+  
Sbjct: 198 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL 257

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM      PN VT+ VL++GL K GE   A      M K G+  + + YN LI G+   
Sbjct: 258 SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L EA+SL  EM     SP V TYN  I GLC +G++  A   L  M    +L +VV+Y
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI GYC+ G++ KA  +  ++    + P +VT+++L+DG C+ G ++ A  L  EM+ 
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + + PD+V +T L++G  K G++      + EML   +    +  ++ I G  K G  S 
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A +   E   K   G+  P+ ++Y  ++  LC  G + +AS+L   M SD + PD  TYT
Sbjct: 498 AFSLQEEMLAK---GF-PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +++   L   R+     +  +M+  G+ P  V   V++ G+   G L+ AF
Sbjct: 554 SIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ + + LI  + K   + + +S+  +M K  +SPDV   N +++ L     +  A  + 
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M + GI   +VTYN+L+D YCK G +++ L + S+M  +G  PN VT++ LI+G  K 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  + A GL  EM+   L      +  LI G    G + E L L +EM+    +P+V T 
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S I+GL K GR+S+A    +++          P+ V Y  +I   C  G ++KA  LF 
Sbjct: 343 NSFIYGLCKLGRMSDA----MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           ++RS  L P   TY T+L GL R   +     L  +MI  GI PD V   ++V G  + G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 558 DLKSAFRCSEFLKE--------------SRIGSSETEGHTTRSF 587
            L  A    EF  E              +RI      G T+R+F
Sbjct: 459 SLSMA---QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 4/291 (1%)

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +   M +F I P + TYN L+   C  G+++    LL +M + G   N VTYN LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +G  K+G+ E+A  +  +M + G++ +  T++ LI G    G +  A+ L  EMV+K   
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P V  + + I GL K G M + ++   +ML   + P V + ++LI+G  + G +  A   
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F    D+    Y  P  V Y  ++  LC  G++  A +L  +M ++ + PD  TYT ++ 
Sbjct: 397 F----DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           G  +   +        +M+  G+  D+      + G  + GD   AF   E
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 259/513 (50%), Gaps = 7/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +   LI  +S+   +E+ L V+ K+    + P ++ CN +L  L  K       E Y  M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+   +VTY  L+D  C  G V + L+L  EM  +G  P  V Y +LI+GL  + + 
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 285

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A+ +   M + G+  + YTYN L+ GY     +  AL    EM+     P V T+   
Sbjct: 286 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSF 345

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK+G +  A      M    + P++  YN LI G+C+ GNL +A  L  E+    +
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYL 405

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P + TYN L+ GLC  G+LE A+ L  +M  EGI  ++VTY  L++G CK G +  A  
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M  +G+E +   +++ I G+ K G+   A  L  EM+ K   PD++++  ++DGL 
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN++E   L ++M+   + P   T +S+IH   +NGR+      F E   K      +
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG----LT 581

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  +I      G++ +A   FS+M+   + P+  TY +++ GL + +RM      
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            A+M++ GI P+     +++      G+ + A 
Sbjct: 642 FAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 253/484 (52%), Gaps = 12/484 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+ ++ + G +++ L +  +++     P     N L+NGL KKG+F+       EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL     TY  LI     +G + +AL+L +EM+ KG  PTV  Y   I+GLC   +M
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A      M    ++P++ +YN L+ GYC++ ++ +A   + E+    L P +VT+  L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLC+ GEL  A    V M   G+ P+I  Y  L++G CK G+L  A     EM    +
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D + Y   I G   +G    A  L ++M  +G   +++ YN ++DG CK G++E+A  
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   GV P+ VT++S+I    + G +     ++ EM+ K L P VV +T LI G +
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G ++     + EM E  I P+V T +SLI+GL K  R+  A NFF E  +K       
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG----IF 651

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-----LRAKRML 525
           PN   Y  +I   C  G   +A  L+  M    ++PD+CT++ +L+ L     L+A R L
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711

Query: 526 DVMM 529
           + ++
Sbjct: 712 ESLL 715



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ + + LI  + K   + + +S+  +M K  +SPDV   N +++ L     +  A  + 
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M + GI   +VTYN+L+D YCK G +++ L + S+M  +G  PN VT++ LI+G  K 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  + A GL  EM+   L      +  LI G    G + E L L +EM+    +P+V T 
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S I+GL K GR+S+A    +++          P+ V Y  +I   C  G ++KA  LF 
Sbjct: 343 NSFIYGLCKLGRMSDA----MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           ++RS  L P   TY T+L GL R   +     L  +MI  GI PD V   ++V G  + G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 558 DLKSAFRCSEFLKE--------------SRIGSSETEGHTTRSF 587
            L  A    EF  E              +RI      G T+R+F
Sbjct: 459 SLSMA---QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 4/291 (1%)

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +   M +F I P + TYN L+   C  G+++    LL +M + G   N VTYN LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +G  K+G+ E+A  +  +M + G++ +  T++ LI G    G +  A+ L  EMV+K   
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P V  + + I GL K G M + ++   +ML   + P V + ++LI+G  + G +  A   
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F    D+    Y  P  V Y  ++  LC  G++  A +L  +M ++ + PD  TYT ++ 
Sbjct: 397 F----DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           G  +   +        +M+  G+  D+      + G  + GD   AF   E
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 39/238 (16%)

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           E +V     LI    K   ++  + ++ +M+   L PDV     ++  L     M + + 
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           +Y+ M E  I P++ T ++L+    K G++   L+   E   +     C+PN V Y  +I
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG----CAPNDVTYNVLI 276

Query: 481 QALCYDGQILKASKLFSDMRSDNLR----------------------------------- 505
             L   G+  +A  L  +M    L+                                   
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           P   TY + + GL +  RM D M  L+DM+   ++PD V    ++ GY   G+L  AF
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 261/481 (54%), Gaps = 4/481 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V    E+M   G+  +  TY +L++C C +  + 
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLP 133

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G EP +V  + L++G C+  ++ EA ++   M E G  P+  T+N L+
Sbjct: 134 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLI 193

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QP++ T+G +++GLCK G++  A +    M K  + 
Sbjct: 194 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 253

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            N+ +YN +IDG CK  ++ +A  L ++ME   I PDVFTYN LI  LC  G+   A  L
Sbjct: 254 ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRL 313

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  NVVT+NSLID + KEG + +A  +  +M ++ ++PN+VT++SLI+G C 
Sbjct: 314 LSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 373

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++T MV K  +PDVV +  LI G  K   ++E + L++EM +  +  +  T
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GLF+ G    A   F  K   +DG    P+ + Y+ ++  LC  G++ KA  +F
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIF--KKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVF 489

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + P+  TY  M+ G+ +A ++ D   L   +   G+ P+ +I   M+ G+   
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549

Query: 557 G 557
           G
Sbjct: 550 G 550



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 264/513 (51%), Gaps = 8/513 (1%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNAL 90
           V  S+   + +L IP  N   +S L+  F     +  AL V  K+  L   P I   ++L
Sbjct: 99  VVISLGEQMQNLGIPH-NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 157

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LNG     +        ++MV  G   D VT+  LI          +A+ L D M+ +G 
Sbjct: 158 LNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 217

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           +P +  Y  +++GLC    +  A S+ + M +  +  N+  YN ++DG CK   ++ A +
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +++M    ++P+V T+  L+  LC  G    A      M +  + PN+  +N LID   
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G L EA  L  EM +  I P++ TYN LI G C   +L+ A+ +   M  +  L +VV
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+LI G+CK   +E+ + +  +M+++G+  N VT+++LI G  +AG+ D A  ++ +M
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V   + PD++ ++ L+DGL K G +++ L +++ + ++K+ P+++T + +I G+ K G++
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +  + F   + K       PN ++Y  +I   C  G   +A  LF +M+ D   PD+  
Sbjct: 518 EDGWDLFCSLSLKG----VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           Y T++R  LR         L+ +M   G V DA
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 606



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 238/474 (50%), Gaps = 9/474 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           + P +   S+L+  +     I EA+ +  ++  +   P     N L++GL    K     
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 206

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              + MV  G   D+ TYG +++  C +GD+  AL+L  +M    IE  VVIY  +I GL
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    M +A  +F  M   G+ P+++TYN+L+   C     + A     +M+   + PNV
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+D   K G+L  A   F  M +  + PNI  YN LI+G C    L EA  + + 
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +  PDV TYN LIKG C   ++E    L ++M + G++ N VTYN+LI G  + GD
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A  +  +M   GV P+++T+S L+DG CK G ++ A+ ++  +    + P++  +  
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G+ K G +++   L+  +    + P+V   +++I G  + G    A   F E   K 
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KE 564

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           DG    P+   Y  +I+A   DG    +++L  +MRS     D  T + ++  L
Sbjct: 565 DGTL--PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 232/440 (52%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EM+     P+++ ++ L+  +   NK     S+   M+  G+  N YTY+ L++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +N LI G   H KA    EA++L   M      PD+FTY  ++ GLC  G ++ A 
Sbjct: 185 DTVTFNTLIHGLFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL+KM K  I ANVV YN++IDG CK   M+ A  + ++M  KG++P+V T++SLI   
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + P+VV F +LID  +K+G + E  +L+ EM++  I P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI+G   + R+  A   F     K     C P+ V Y  +I+  C   ++ +  +
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKD----CLPDVVTYNTLIKGFCKAKRVEEGME 417

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TY T+++GL +A        +   M+  G+ PD +   +++ G  
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G L+ A    E+L++S++
Sbjct: 478 KYGKLEKALVVFEYLQKSKM 497



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 213/408 (52%), Gaps = 6/408 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            P +F+  T++    + G I+ AL + +K+E   +   +   N +++GL K    D  ++
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M   G+  DV TY  LI C C  G    A  L  +MI++ I P VV +  LI    
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K++EAE +F  M +  + PN+ TYN+L++G+C    ++ A + +  M+  +  P+VV
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G CK   +      F  M++ G+  N   YN LI G  +AG+   A  +  +M
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD+ TY+IL+ GLC  G+LE A  + + + K  +  N+ TYN +I+G CK G +
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E    +   ++ KGV+PNV+ ++++I G C+ G  + A  L+ EM     +PD   +  L
Sbjct: 518 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTL 577

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           I    +DG+   +  L KEM          T+S +I+ +  +GR+  +
Sbjct: 578 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 624



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 238/481 (49%), Gaps = 7/481 (1%)

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL  + K D     + EMV       ++ +  L+            ++L ++M + GI 
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
                Y+IL++  C  +++  A ++   M + G  P++ T ++L++GYC    ++ A+  
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M+    +P+ VTF  L+ GL    +   A      M   G  P++F Y  +++G CK
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G++  A+SL  +MEK +I  +V  YN +I GLC    ++ A  L  KM  +GI  +V T
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNSLI   C  G    A  + S M E+ + PNVVTF+SLID   K G +  A  L+ EM+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +S+ P++V + +LI+G      + E  +++  M+     P V T ++LI G  K  R+ 
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             +  F E + +   G    N V Y  +IQ L   G    A K+F  M SD + PD  TY
Sbjct: 414 EGMELFREMSQRGLVG----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFL 569
           + +L GL +  ++   +++   + K  + P+     +M+ G  + G ++  +   CS  L
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529

Query: 570 K 570
           K
Sbjct: 530 K 530


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/479 (34%), Positives = 265/479 (55%), Gaps = 10/479 (2%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P+V  +ST I     +G++E AL   R +     L  +   NA+++GL KKG+ D   +
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALK 346

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             EEM  CG+  DV TY +LI   C QGDV K L L +EM    +EP++V Y+ L HGLC
Sbjct: 347 VLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLC 406

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +     +  +FR +   G   +   Y+ L+ G+C   D++ A +   EM+ +NL P+  
Sbjct: 407 KKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPS 466

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            F  L+ G CK+G    A  FF  M + G+ P+I   N +ID HC+ G + EA++L +EM
Sbjct: 467 NFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM 526

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +   I P++FTYN +I  LC   + E A  L   M K  +L +VV Y++LIDG+ K+ + 
Sbjct: 527 QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNS 586

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KAL + ++M + GV P++V ++ LI+  C    +  A  L+ +M    + PD + +T++
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSV 646

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I G  + G+M++   L+ EML+    P+V T +SL+ G  K  RI  A     E   K  
Sbjct: 647 IAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG- 705

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               +P+ V Y  +I A    G + KA ++ ++M+ + + PD+ TY  ML  LL+AK++
Sbjct: 706 ---ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKKL 760



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/625 (28%), Positives = 307/625 (49%), Gaps = 74/625 (11%)

Query: 4   VLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNS---------LEIPKFNPS- 53
           VLA A ++     L++D+            VCY  +N +N          LE PK     
Sbjct: 133 VLALAGMHMEVYALLRDI------------VCY--YNKVNLDAFELFPILLESPKDAARS 178

Query: 54  --VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
             VF  LI  F+    +E A+ V+   +K  +  + ++CN LL  L +  + + +   +E
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 109 EMVLCGLVADVVTYGVLIDCCC----GQGDV--MKALNLFDEMIDKGIEPTVVIYTI--- 159
           EM   G   +V TY ++++  C    G+ D+   +A  + +EM   G  PTVV Y+    
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 160 --------------------------------LIHGLCNENKMVEAESMFRSMRECGVVP 187
                                           +IHGLC + ++ EA  +   M+ CG+ P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++YTY+ L+ G+CK  DV + L    EM + N++P++V++  L  GLCK      + + F
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             +   G   +   Y+ LI G C  G+L  A  L  EM +  ++PD   +  L+ G C +
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G    A      M + GIL ++ T N +ID +C+EG +E+AL++ ++M  +G+ PN+ T+
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +++I+  CK    + A+ L+  M+ ++++P VVV++ LIDG +K  N ++ L LY  ML+
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK 598

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             +TP +   + LI+ L    R+  A N F + T+       +P+ + Y ++I   C  G
Sbjct: 599 IGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG----MTPDKISYTSVIAGFCRIG 654

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + KA  LF++M      P   TYT+++ G  +  R+    ML+ +M + GI PD V   
Sbjct: 655 DMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYN 714

Query: 548 VMVRGYQENGDLKSAFRCSEFLKES 572
           V++  ++  G+L  A      +KE+
Sbjct: 715 VLIAAHRRRGNLDKALEMLNEMKEN 739



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/377 (20%), Positives = 143/377 (37%), Gaps = 89/377 (23%)

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +V R ++F   M  +    ++  F  +++ L   G         +HM  + +  +I  Y 
Sbjct: 104 EVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAG---------MHMEVYALLRDIVCYY 154

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
             ++      + FE   +  E  K + +  V  +++LIK       LE A  +  +  K 
Sbjct: 155 NKVNL-----DAFELFPILLESPK-DAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKT 208

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  +  + N L+    +    E   S+  +M   G  PNV T++ +++  CK GN   A
Sbjct: 209 GLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-GNFGEA 267

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
                                       D + ++   + +EM     +P+V T S+ I+G
Sbjct: 268 ----------------------------DIDTRQATEILEEMERNGESPTVVTYSTYIYG 299

Query: 444 LFKNGRISNALNFFLEKTDKTDG---GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           L + G + +AL+ F+      +G    YC      Y AII  LC  G++ +A K+     
Sbjct: 300 LCRVGYVESALD-FVRSLISANGLVNVYC------YNAIIHGLCKKGELDEALKV----- 347

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                                         L +M   GI PD     +++ G+ + GD++
Sbjct: 348 ------------------------------LEEMKSCGISPDVYTYSILIHGFCKQGDVE 377

Query: 561 SAFRCSEFLKESRIGSS 577
                 E +K S +  S
Sbjct: 378 KGLYLIEEMKYSNMEPS 394


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 289/555 (52%), Gaps = 56/555 (10%)

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F E+  +E+A+ ++  +     LP++     L+  +++ G+ D V   + +M +  +  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +  ++ +L+ C C    +  AL+ F ++   G  PTVV ++ L+HGLC E+++ EA  +F
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M +    PN+ T+  LM+G C+   V  A+     ML   LQPN +T+G ++DG+CK+
Sbjct: 172 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 238 GELRAAGNFFVHMAKFG-VFPNIFVY-----NCLIDGHCKAGNLFEAMSLCSEM-EKFEI 290
           G+  +A N    M +   + PN+ ++      C+I+G C +G   EA  L  EM E+ +I
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV TYN LI      G+   AE L  +M   GI+ + +TY+S+IDG+CK+  ++ A  
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M  KG  P+++TF++LI G C+A  +D  + L  EM    LV + + +T LI G  
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDK----- 463
           + G++     L +EM+ + + P+V T ++L+ GL  NG++ +AL  F  ++K+       
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467

Query: 464 ---------------------TDGGYCS--------------PNHVLYAAIIQALCYDGQ 488
                                 +G +                P+ + Y ++I  LC   +
Sbjct: 468 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSR 527

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A+++F  M S +  P+  T+TT++ G  +A R+ D + L  +M + GIV +A+    
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587

Query: 549 MVRGYQENGDLKSAF 563
           ++ G+++ G++  A 
Sbjct: 588 LIHGFRKVGNINGAL 602



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 140/425 (32%), Positives = 230/425 (54%), Gaps = 21/425 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---------VLPAIQACNALLNGLIKKGKFD 101
           N   + T++    +MG    AL + RK+E         V+  ++    ++NG    G++ 
Sbjct: 213 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWS 272

Query: 102 SVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
              +  +EM+    ++ DVVTY  LI+    +G   +A  L+DEM+ +GI P+ + Y+ +
Sbjct: 273 EAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I G C +N++  AE MF  M   G  P++ T+N L+ GYC+   V+  ++  HEM    L
Sbjct: 333 IDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 392

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N +T+  L+ G C+VG+L AA +    M   GV PN+   N L+DG C  G L +A+ 
Sbjct: 393 VANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALE 452

Query: 281 LCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           +   M+K +           + PDV TYNILI GL   G+   AE L ++M   GI+ + 
Sbjct: 453 MFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 512

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TYNS+I G CK+  +++A  +   M  K   PNVVTF++LI+G CKAG +D  + L+ E
Sbjct: 513 ITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 572

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + +V + + +  LI G  K GN+   L +++EM+ + + P   T+ +++ GL+    
Sbjct: 573 MGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEE 632

Query: 450 ISNAL 454
           +  A+
Sbjct: 633 LKRAV 637



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 247/506 (48%), Gaps = 60/506 (11%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           F+P+V  FSTL+        I EAL ++ ++   P +     L+NGL ++G+        
Sbjct: 144 FHPTVVTFSTLLHGLCVEDRISEALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALL 202

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPTVVIY-----TILI 161
           + M+  GL  + +TYG ++D  C  GD + ALNL  +M +   I+P VVI+     T +I
Sbjct: 203 DRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMI 262

Query: 162 HGLCNENKMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +G C+  +  EA+ + + M E   + P++ TYNAL++ + K      A E Y EML   +
Sbjct: 263 NGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 322

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            P+ +T+  ++DG CK   L AA + F  MA  G  P+I  +N LI G+C+A  + + + 
Sbjct: 323 IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  EM +  +  +  TY  LI G C VG L  A+ LLQ+M   G+  NVVT N+L+DG C
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442

Query: 341 KEGDMEKALS----------------------------------------------VCSQ 354
             G ++ AL                                               +  +
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  +G+ P+ +T++S+I G CK   +D A  ++  M  KS  P+VV FT LI+G  K G 
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + + L L+ EM    I  +  T  +LIHG  K G I+ AL+ F E      G Y  P+ +
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM--ASGVY--PDTI 618

Query: 475 LYAAIIQALCYDGQILKASKLFSDMR 500
               ++  L    ++ +A  +  D++
Sbjct: 619 TIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 207/412 (50%), Gaps = 23/412 (5%)

Query: 37  SVFNALNSLE-IPKFNPSVF-------STLIIAFSEMGHIEEALWVYRKI----EVLPAI 84
           S  N L  +E +    P+V        + +I  F   G   EA  + +++    ++ P +
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              NAL+N  +K+GKF    E Y+EM+  G++   +TY  +ID  C Q  +  A ++F  
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M  KG  P ++ +  LI G C   ++ +   +   M E G+V N  TY  L+ G+C+V D
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF----------- 253
           +N A +   EM+   + PNVVT   L+DGLC  G+L+ A   F  M K            
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV P++  YN LI G    G   EA  L  EM    I PD  TYN +I GLC   +L+ A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +   M  +    NVVT+ +LI+GYCK G ++  L +  +M  +G+  N +T+ +LI G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             K GNI+ A+ ++ EM+   + PD +    ++ GL     +K  + + +++
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 202/410 (49%), Gaps = 15/410 (3%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  M     +P++  +  LM    ++  ++  +  + +M    +  N  +F +LM
Sbjct: 61  DAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILM 120

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C   +L  A + F  + K G  P +  ++ L+ G C    + EA+ L  +M K    
Sbjct: 121 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK---- 176

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V T+  L+ GLC  G++  A  LL +M ++G+  N +TY +++DG CK GD   AL++
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236

Query: 352 CSQMTE-KGVEPNVVTF-----SSLIDGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTA 404
             +M E   ++PNVV +     + +I+G C +G    A  L  EM+  K + PDVV + A
Sbjct: 237 LRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNA 296

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+   K+G   E   LY EML   I PS  T SS+I G  K  R+  A + F     K 
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 356

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               CSP+ + +  +I   C   ++    KL  +M    L  +  TYTT++ G  +   +
Sbjct: 357 ----CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                LL +M+  G+ P+ V    ++ G  +NG LK A    + +++S++
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 179/371 (48%), Gaps = 42/371 (11%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G  ++  L  A + F  M +    P++  +  L+    + G L   +SL  +ME   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI------------- 336
           +  + +++ IL+K  C   +L  A     K+ K G    VVT+++L+             
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 337 ------------------DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                             +G C+EG + +A+++  +M E G++PN +T+ +++DG CK G
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 379 NIDAAMGLYTEM-VIKSLVPDVVVF-----TALIDGLSKDGNMKETLRLYKEMLE-AKIT 431
           +  +A+ L  +M  +  + P+VV++     T +I+G    G   E  +L +EMLE  KI+
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P V T ++LI+   K G+   A   + E   +       P+ + Y+++I   C   ++  
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRG----IIPSTITYSSMIDGFCKQNRLDA 344

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  +F  M +    PD  T+ T++ G  RAKR+ D + LL +M + G+V + +    ++ 
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 552 GYQENGDLKSA 562
           G+ + GDL +A
Sbjct: 405 GFCQVGDLNAA 415


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/570 (31%), Positives = 280/570 (49%), Gaps = 43/570 (7%)

Query: 31  PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQAC 87
           PH +  + F +    +    + S F  LI  + +   + + + V    R   +LP ++  
Sbjct: 136 PHQIFENFFESYKKYKFS--SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTL 193

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +ALLN L +  KF  V E ++ +V  G+  D   Y V++ C C   D  KA  + ++   
Sbjct: 194 SALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEG 253

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G   ++V Y + I+GLC   ++ EA  + RS+ E G+  +L TY  L+ G C++ +   
Sbjct: 254 NGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEV 313

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            +E   EM+     P+      L++GL K+G +  A      + K GV PN+FVYN +I+
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CK G L EA  L S M +  ++P+  TY ILI G     +L+ A     KM + GI A
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V +YNS+I+  CK G M+ A  +  +M +KG++P V T++SLI G CK G +  A  LY
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  K + P+ V FTALI GL +   M E  +L+ EM+E KI P+  T + LI G  + 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G  + A     E   K      SP+   Y  +I  LC  G++ +A +  +D+   + R D
Sbjct: 554 GNTTRAFELLDEMIKKG----LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD 609

Query: 508 NCTYTTMLRGLLRAKRMLDVMM----------------------------------LLAD 533
              YT +L+G  +  R+ + ++                                  LL +
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLRE 669

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD VI  +++ G+ ++G+LK AF
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAF 699



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 268/549 (48%), Gaps = 42/549 (7%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +  S LI    +MG IE A  +  K+    V+P +   N+++N L K GK +     +  
Sbjct: 331 AAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSV 390

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL  + VTY +LID    +  +  A   F++MI+ GI  TV  Y  +I+  C   K
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M  AE +F+ M + G+ P + TY +L+ GYCK   V +A + YHEM    + PN VTF  
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ GLC++ ++  A   F  M +  + PN   YN LI+GHC+ GN   A  L  EM K  
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +SPD +TY  LI GLC  G++  A+  +  ++ +    + + Y +L+ G+CKEG +++AL
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 350 ----------------------------------SVCSQMTEKGVEPNVVTFSSLIDGQC 375
                                              +  +M  KG++P+ V ++ LIDG  
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+GN+  A   +  M+ +  VP+ V +TAL++GL K G + E   L+K ML  +  P+  
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T    +  L K G + NAL           G +   N V Y  +I+  C  G+  +A+KL
Sbjct: 751 TYGCFLDHLTKEGNMENALQL---HNAMLQGSF--ANTVTYNILIRGYCQIGKFQEAAKL 805

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M    + PD  TY+T +    +   +   M +   M++ G+ PD V+   ++     
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCL 865

Query: 556 NGDLKSAFR 564
           NG+L  A +
Sbjct: 866 NGELDRALQ 874



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 248/517 (47%), Gaps = 48/517 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  F     ++ A + + K+    +   + + N+++N   K GK       +
Sbjct: 399 NDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF 458

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  GL   V TY  LI   C  G V KA  L+ EM  KGI P  V +T LI GLC  
Sbjct: 459 KEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI 518

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           NKM EA  +F  M E  ++PN  TYN L++G+C+  +  RA E   EM+   L P+  T+
Sbjct: 519 NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTY 578

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC  G +  A  F   +       +   Y  L+ G CK G + EA+    EM  
Sbjct: 579 RPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVG 638

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ +Y +LI G          E LL++M+ +G+  + V Y  LIDG+ K G+++K
Sbjct: 639 RGLQMDLVSYAVLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILIDGFIKSGNLKK 697

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A      M  +G  PN VT+++L++G  KAG ++ A  L+  M++   +P+ + +   +D
Sbjct: 698 AFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLD 757

Query: 408 GLSKDGNMKETLRLYKEMLEAK----------------------------------ITPS 433
            L+K+GNM+  L+L+  ML+                                    + P 
Sbjct: 758 HLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817

Query: 434 VFTVSSLIHGLFKNGRISNALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
             T S+ I+   K G +  A++ +   L++  K       P+ V++  +I A C +G++ 
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK-------PDRVVFNFLIHACCLNGELD 870

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +A +L +DM    L+P   TY +++  L +  R+  V
Sbjct: 871 RALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 224/517 (43%), Gaps = 92/517 (17%)

Query: 134 DVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEA------------------E 174
           D   AL  F+ + + +    +   + ILIH L   N    A                  E
Sbjct: 82  DSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFE 141

Query: 175 SMFRS----------------------------------MRECGVVPNLYTYNALMDGYC 200
           + F S                                  MR+ G++P + T +AL++   
Sbjct: 142 NFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALA 201

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++    + LE +  +++  ++P+   + V++  LC++ +   A          G   +I 
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIV 261

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV------------- 307
            YN  I+G CK+  ++EA+ +   + +  +  D+ TY  L+ GLC +             
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321

Query: 308 ----------------------GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                                 G +EGA  LL K+ K G++ N+  YNS+I+  CK G +
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E+A  + S M E+G+ PN VT++ LIDG  +   +D A   + +M+   +   V  + ++
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+   K G MK    L+KEM++  + P+V T +SLI G  K+G +  A   + E T K  
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG- 500

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               +PN V + A+I  LC   ++ +ASKLF +M    + P+  TY  ++ G  R     
Sbjct: 501 ---IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTT 557

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               LL +MIK G+ PD    + ++ G    G +  A
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA 594



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 18/162 (11%)

Query: 31  PHHVCYSVF--------NALNSLEIPKF-------NPSVFSTLIIAFSEMGHIEEA---L 72
           P+H+ Y  F        N  N+L++          N   ++ LI  + ++G  +EA   L
Sbjct: 747 PNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLL 806

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
            V   I ++P     +  +    K+G  D+  + +E M+  GL  D V +  LI  CC  
Sbjct: 807 DVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLN 866

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           G++ +AL L ++M+ +G++PT   Y  L+  L    ++ + +
Sbjct: 867 GELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 267/518 (51%), Gaps = 12/518 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  LI    + G    AL   R ++   V P +   N L++GL K G  D   + +
Sbjct: 61  NLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE--PTVVIYTILIHGLC 165
           E M    +  ++VTY  +I   C  G++ KA  L +EMI KG +  P +V Y  LI+   
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +++ EA +    M+  G+ P++ T N L+ G CK  DV  ALE    M      P+V+
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++  LC  G++  A      M+     P++  +N L+DG CKAG L  A+ +  EM
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  I PDV TY IL+ GLC VGQ++ A  LL+++ ++G + +V+ Y SL+DG CK G++
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E+A  +  +M+ +G    VV +SSL+ G C+AGN+  A  +  EMV  ++VP +  +  +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           + GL KDG++ + + L  +++     P V T ++LI GL K  R+  A +   E   +  
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG- 476

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C PN V   +++  LC  G++  A  L  +M      P+   YT+++ GL ++ RM 
Sbjct: 477 ---CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           D  M+L  M   G+  D    + ++      G +  A 
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAM 571



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 257/508 (50%), Gaps = 12/508 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+ LI    + G+ ++A+ ++  +E   V P I   N +++GL K G  +   E  EEM
Sbjct: 99  IFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM 158

Query: 111 VLCG--LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +  G     D+VTY  LI+       + +A    ++M   GI P V+   IL+ G+C + 
Sbjct: 159 IRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDG 218

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + EA  +   M+  G VP++ TYN+++   C    V  A E    M   +  P++VTF 
Sbjct: 219 DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFN 275

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+DG CK G L  A      M +  + P++  Y  L++G C+ G +  A  L  E+ + 
Sbjct: 276 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ 335

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PDV  Y  L+ GLC  G++E A  L+++M   G    VV Y+SL+ GYC+ G++ KA
Sbjct: 336 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + ++M    + P + T++ ++ G  K G+I  A+ L +++V +  VPDVV +  LIDG
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K   ++E   L  EM      P+  T+ S++ GL + GR+ +A +  +E + K     
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH--- 512

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +PN V+Y ++I  LC   ++  A  +   MR   +  D+  Y  ++  +    R+ + M
Sbjct: 513 -APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAM 571

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +  +M+  G +PD   ++ +      N
Sbjct: 572 AMYDEMVARGFLPDGSTSKTLEEAAMSN 599



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 246/482 (51%), Gaps = 9/482 (1%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + + N LL+ L+K G      + Y++++  G   ++VT+ +LI   C  G  M+AL    
Sbjct: 27  VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            + +  + P V I+ +LIHGL  +    +A  +F +M    V P + TYN ++ G CK  
Sbjct: 87  ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSG 146

Query: 204 DVNRALEFYHEMLHHNLQ--PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           ++ +A E   EM+    +  P++VT+  L++   +   +R A  F   M   G+ P++  
Sbjct: 147 NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLT 206

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N L+ G CK G++ EA+ +   M+     PDV TYN +I  LC  G++  A  +L+ M 
Sbjct: 207 CNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM- 265

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
                 ++VT+N+L+DG+CK G + +AL V  +M  + + P+V+T++ L++G C+ G + 
Sbjct: 266 --SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 323

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  E+V +  +PDV+ +T+L+DGL K G ++E  +L KEM        V   SSL+
Sbjct: 324 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLV 383

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G +  A     E           P    Y  ++  L  DG I KA  L SD+ +
Sbjct: 384 SGYCRAGNVHKAREILAEMVSIN----MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  TY T++ GL +A R+ +   L  +M   G  P+ V    +V G    G +  
Sbjct: 440 RGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDD 499

Query: 562 AF 563
           A+
Sbjct: 500 AW 501



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 238/451 (52%), Gaps = 9/451 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV +Y  L+D     G   +   ++ +++  G  P +V + ILI G C   + + A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
               R++ E  V P++Y +N L+ G  K  + ++A++ +  M    ++P +VT+  ++ G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 234 LCKVGELRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           LCK G L  A      M + G    P+I  YN LI+   +A  + EA +   +M+   I+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV T NIL+ G+C  G +E A  +L  M   G + +V+TYNS+I   C  G + +A  +
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M+     P++VTF++L+DG CKAG +  A+ +  EM  ++++PDV+ +T L++GL +
Sbjct: 262 LKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G ++    L +E++     P V   +SL+ GL K+G I  A     E + +     C  
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG----CRT 374

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
             V+Y++++   C  G + KA ++ ++M S N+ P   TY  +L GL++   +   + L+
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 434

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +D++  G VPD V    ++ G  +   ++ A
Sbjct: 435 SDLVARGYVPDVVTYNTLIDGLCKANRVREA 465



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 180/344 (52%), Gaps = 9/344 (2%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +V ++  L+D L K G     G  +  +   G  PN+  +  LI G+CKAG    A+   
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             +++F ++PDV+ +N+LI GL   G  + A  L + M    +   +VTYN++I G CK 
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 343 GDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           G++EKA  +  +M  KG +  P++VT+++LI+   +A  I  A     +M    + PDV+
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
               L+ G+ KDG+++E L +   M  A   P V T +S+IH L   G++  A       
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           +       CSP+ V +  ++   C  G + +A ++  +M  +N+ PD  TYT ++ GL R
Sbjct: 266 S-------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             ++     LL ++++ G +PD +    +V G  ++G+++ A +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 2/223 (0%)

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++G   +V +YN L+D   K G   +   V   +   G  PN+VTF  LI G CKAG   
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+     +   S+ PDV +F  LI GL KDGN  + ++L++ M  +++ P + T +++I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K+G +  A     E   K  GG  +P+ V Y  +I A     +I +A      M++
Sbjct: 140 SGLCKSGNLEKARELLEEMIRK--GGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             + PD  T   ++ G+ +   + + + +L  M   G VPD +
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 6/216 (2%)

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           + G + +V +++ L+D   K+G+      +Y +++     P++V F  LI G  K G   
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
             L   + + E  + P V+  + LIHGLFK+G    A+  F    +  +     P  V Y
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF----ENMESSRVKPEIVTY 135

Query: 477 AAIIQALCYDGQILKASKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             +I  LC  G + KA +L  +M  +     PD  TY T++    RA R+ +       M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
              GI PD +   ++V G  ++GD++ A    + +K
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           ++ R   A+ FF    ++   GY    H  Y  ++  L   G   +  K++ D+      
Sbjct: 3   RSSRPDLAIQFFDWAGEQD--GYKHDVHS-YNHLLDILVKSGHHFRTGKVYKDLLHSGCS 59

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  T+  ++RG  +A + +  +  L  + +  + PD  I  V++ G  ++G+   A + 
Sbjct: 60  PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119

Query: 566 SEFLKESRI 574
            E ++ SR+
Sbjct: 120 FENMESSRV 128


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 250/492 (50%), Gaps = 43/492 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++   K  +FD       EM    +  DVVT+ VLID     GDV  A+ L D M +
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KG++P +V +  ++ GLC   +  +A+ +FR+M +C V P++ ++N L+ G+C+V +V  
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A++FY EM    + P+VV+F  L+      G++  A  +   M   G+ P+  +Y  +I 
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG++ EA+ +  EM      PDV TYN L+ GLC   +L  AE LL +M + G+  
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400

Query: 328 N-----------------------------------VVTYNSLIDGYCKEGDMEKALSVC 352
           +                                   VV YNSLIDG C++GD+ KA  + 
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M  + + PN VT+S LID  C+ G ++ A G   EMV K  +P+++ + ++I G  + 
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCS 470
           GN+K+  +  ++M++  I P + T ++LIHG  K   +  A N F  +EK          
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE------MVQ 574

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  II      G + +A ++F  M +  + PD  TY +++ G + A    +   L
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634

Query: 531 LADMIKMGIVPD 542
             +M+  G  PD
Sbjct: 635 HDEMMHRGFAPD 646



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 138/400 (34%), Positives = 229/400 (57%), Gaps = 8/400 (2%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           VF A++   +    P V  F+ LI  F  +G +EEA+  Y++++   V P + + + L+ 
Sbjct: 249 VFRAMDQCSVA---PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIG 305

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
               +GK D    +  EM   GLV D V Y ++I   C  G + +AL + DEM+  G  P
Sbjct: 306 LFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP 365

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            VV Y  L++GLC ++++++AE +   M+E GV P+L T+  L+ GYC+  +  +AL+ +
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             +LH  L+P+VV +  L+DG+C+ G+L  A   +  M    +FPN   Y+ LID HC+ 
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA     EM      P++ TYN +IKG C  G ++  +  LQKM ++ IL +++T+
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI GY KE +M  A +V + M ++ V+P+ VT++ +I+G  + GN++ A  ++ +M  
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA 605

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             + PD   + +LI+G    GN KE  +L+ EM+     P
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 214/405 (52%), Gaps = 4/405 (0%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I++H  C   +  +A+++   M +  V P++ T+N L+D   +  DV+ A+     M + 
Sbjct: 162 IMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANK 221

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+P +VTF  ++ GLCK      A   F  M +  V P++  +N LI G C+ G + EA
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M    EM++  ++PDV +++ LI      G+++ A   L++M   G++ + V Y  +I G
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C+ G M +AL V  +M   G  P+VVT+++L++G CK   +  A  L  EM  + + PD
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  FT LI G  +DGN ++ L+L+  +L  ++ P V   +SLI G+ + G ++ A   + 
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW- 460

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D        PNHV Y+ +I + C  GQ+ +A     +M S    P+  TY ++++G 
Sbjct: 461 ---DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            R+  +      L  M++  I+PD +    ++ GY +  ++  AF
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 202/412 (49%), Gaps = 4/412 (0%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   ++ +LI       K  EA   FR + +  V       NAL+    +    + A E 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y  +L  + + N  T  +++   CK  E   A      M K  VFP++  +N LID   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG++  A++L   M    + P + T+N ++KGLC   + + A+ + + M +  +  +V +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N LI G+C+ G++E+A+    +M ++GV P+VV+FS LI      G +D A     EM 
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              LVPD V++T +I G  + G+M E LR+  EM+     P V T ++L++GL K  R+ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A     E  ++      +P+   +  +I   C DG   KA +LF  +    LRPD   Y
Sbjct: 385 DAEELLNEMKERG----VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAY 440

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +++ G+ R   +     L  DM    I P+ V   +++  + E G ++ AF
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 10/299 (3%)

Query: 281 LCSEMEKFEISPD----VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           L  E  +  +S D     +T NI++   C   + + A+ ++ +M K  +  +VVT+N LI
Sbjct: 140 LAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLI 199

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D   + GD++ A+++   M  KG++P +VTF+S++ G CK    D A  ++  M   S+ 
Sbjct: 200 DARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALN 455
           PDV  F  LI G  + G ++E ++ YKEM +  +TP V + S LI GLF   G++ +A  
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMDHAAA 318

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +  E      G    P+ V+Y  +I   C  G + +A ++  +M      PD  TY T+L
Sbjct: 319 YLRE----MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            GL +  R+LD   LL +M + G+ PD      ++ GY  +G+ + A +  + L   R+
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 267/536 (49%), Gaps = 9/536 (1%)

Query: 31  PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQAC 87
           P  V  S+  AL+  +    +P+V   L+  + + G +++A  V    R   + P+I+ C
Sbjct: 28  PPVVLASIHRALS--DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCC 85

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NALL  L++      +W+  E MV  G+  DV TY  LI+  C   +   A  +  EM +
Sbjct: 86  NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 145

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G     V Y +LI GLC    + EA    + M + G+VP+ +TY AL++G CK    N 
Sbjct: 146 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     EM    L+PNVV +  L+DG  + G    A      M   GV PN   Y+ L+ 
Sbjct: 206 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G +  A  L  +M +    PD  TYN++I+G       + A  LL +M   GI  
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV TY+ +I G C+ G+ EKA  +  +MT KG++PN   ++ LI G C+ GN+  A  ++
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M   +++PD+  + +LI GLSK G ++E+ + + +M E  + P+ FT S LIHG  KN
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 445

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G + +A        D        PN V+Y  ++++      I K S  F  M    +  D
Sbjct: 446 GDLESAEQLVQRMLDTG----LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 501

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           N  Y  ++  L  +  M     +L+++ K G VPD  +   ++ G  +  D + AF
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 256/517 (49%), Gaps = 7/517 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI      G +EEA    + +E   ++P      AL+NGL K  + +     
Sbjct: 150 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 209

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM    L  +VV Y  LID    +G+  +A  +  EM+  G++P  + Y  L+ GLC 
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +M  A  + + M      P+  TYN +++G+ +  +   A     EM +  + PNV T
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++ GLC+ GE   A +    M   G+ PN FVY  LI G+C+ GN+  A  +  +M 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K  + PD++ YN LI GL  VG++E +     +M + G+L N  TY+ LI GY K GD+E
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M + G++PN V +  L++   K+ +I+     +  M+ + ++ D  ++  LI
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             LS  GNM+   R+  E+ +    P V   SSLI GL K      A     E + K   
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG-- 567

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN V Y A+I  LC  G I  A  +F+ + +  L P+  TYT+++ G  +   + +
Sbjct: 568 --VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISN 625

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              L  +M+  GI PDA +  V+  G    GDL+ A 
Sbjct: 626 AFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 662



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/596 (29%), Positives = 278/596 (46%), Gaps = 65/596 (10%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVL 81
           L KSR+ +    ++ + ++  E+ K N  V++ LI  F   G+ +EA  + +++    V 
Sbjct: 197 LCKSRRSNE-AKALLDEMSCAEL-KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 254

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     + L+ GL K G+ D      ++MV      D +TY ++I+      +   A  L
Sbjct: 255 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRL 314

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM + GI P V  Y+I+IHGLC   +  +A  +   M   G+ PN + Y  L+ GYC+
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V+ A E + +M   N+ P++  +  L+ GL KVG +  +  +F  M + G+ PN F 
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISP----------------------------- 292
           Y+ LI G+ K G+L  A  L   M    + P                             
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494

Query: 293 ------DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D   Y ILI  L   G +E A  +L ++ K G + +V  Y+SLI G CK  D E
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  +  +M++KGV+PN+V +++LIDG CK+G+I  A  ++  ++ K LVP+ V +T+LI
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 614

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K G++     LY EML   ITP  F  S L  G    G +  A+    E   +   
Sbjct: 615 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 674

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              S N+     ++   C  G++ +  KL   +    L P+  T   ++ GL  A ++ +
Sbjct: 675 SISSFNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 729

Query: 527 VMM-------------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           V                     L  DMI  G +P  V++  M+R + + G+L  A 
Sbjct: 730 VHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKAL 784



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 235/511 (45%), Gaps = 84/511 (16%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   + +++GL + G+ +   +  EEM   GL  +   Y  LI   C +G+V  A 
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +FD+M    + P +  Y  LI GL    ++ E+   F  M+E G++PN +TY+ L+ GY
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D+  A +    ML   L+PN V +  L++   K  ++    + F  M   GV  + 
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI     +GN+  A  + SE+EK    PDV  Y+ LI GLC     E A G+L +
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K+G+  N+V YN+LIDG CK GD+  A +V + +  KG+ PN VT++SLIDG CK G+
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622

Query: 380 IDAAMGLYTEMVIKSLVPDVVV----------------------------------FTAL 405
           I  A  LY EM+   + PD  V                                  F  L
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 682

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTD 462
           +DG  K G M+ETL+L   ++   + P+  T+ ++I GL + G++S     F+E   KT 
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 742

Query: 463 KTDGGYCS------------PNHVL----------------------------------Y 476
           ++   + S            P  V+                                  Y
Sbjct: 743 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 802

Query: 477 AAIIQALCYDGQILKASKLFSDM-RSDNLRP 506
            AI+  LC  G++ +A  L  +M +  NL+P
Sbjct: 803 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 206/427 (48%), Gaps = 57/427 (13%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++LI   S++G +EE+   + +++   +LP     + L++G +K G  +S  +  + M+
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + V Y  L++      D+ K  + F  M+D+G+     IY ILIH L +   M 
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +   + + G VP+++ Y++L+ G CK AD  +A     EM    + PN+V +  L+
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK G++  A N F  +   G+ PN   Y  LIDG CK G++  A  L +EM    I+
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F Y++L  G    G LE A  L+++M+  G  A++ ++N+L+DG+CK G M++ L +
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKL 698

Query: 352 CSQMTEKGVEPNVVTFSSLIDG-------------------------------------- 373
              +  +G+ PN +T  ++I G                                      
Sbjct: 699 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 758

Query: 374 ---------------QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
                           CK GN+D A+ L   +V KS       + A++D L + G + E 
Sbjct: 759 QGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 818

Query: 419 LRLYKEM 425
           L L KEM
Sbjct: 819 LNLLKEM 825



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 147/332 (44%), Gaps = 55/332 (16%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++ L   G  ++ +    E+   G V DV  Y  LI   C   D  KA  + DEM  KG
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++P +V Y  LI GLC    +  A ++F S+   G+VPN  TY +L+DG CKV D++ A 
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             Y+EML   + P+   + VL  G    G+L  A  F +         +I  +N L+DG 
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA-MFLIEEMFLRGHASISSFNNLVDGF 686

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL---------------EGA- 313
           CK G + E + L   +    + P+  T   +I GL   G+L               E A 
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 746

Query: 314 ------------------------------EGLLQK--MYKEGILANVV-----TYNSLI 336
                                         EG L K  M ++ I+A        +Y +++
Sbjct: 747 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 806

Query: 337 DGYCKEGDMEKALSVCSQMTEKG-VEPNVVTF 367
           D  C++G + +AL++  +M ++G ++P +V  
Sbjct: 807 DNLCRKGKLSEALNLLKEMDKRGNLQPTLVAL 838



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 6/274 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP V   ++L+      G+++ A  ++  M   G+  ++   N+L+    +   M     
Sbjct: 46  SPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWK 103

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+ P+V T+S+LI+  CK    D A  +  EM  +    + V +  LI GL 
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G ++E     K+M +  + P  FT  +LI+GL K+ R + A        D+       
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL----DEMSCAELK 219

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V+YA +I     +G   +A K+  +M +  ++P+  TY  ++RGL +  +M    +L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M++    PD +   +++ G+  + + K AFR
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFR 313


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 289/564 (51%), Gaps = 15/564 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y  AR ++K+++   L S K   V    F AL  +  +   NPSV+  LI  
Sbjct: 120 HILVRARMYDPARHILKELS---LMSGKSSFV----FGALMTTYRLCNSNPSVYDILIRV 172

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+++L ++R + +    P++  CNA+L  ++K G+  SVW F +EM+   +  D
Sbjct: 173 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 232

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G   K+  L  +M   G  PT+V Y  ++H  C + +   A  +  
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 292

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M+  GV  ++ TYN L+   C+   + +      +M    + PN VT+  L++G    G
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A      M  FG+ PN   +N LIDGH   GN  EA+ +   ME   ++P   +Y 
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+ GLC   + + A G   +M + G+    +TY  +IDG CK G +++A+ + ++M++ 
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++P++VT+S+LI+G CK G    A  +   +    L P+ ++++ LI    + G +KE 
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           +R+Y+ M+    T   FT + L+  L K G+++ A  F   +   +DG    PN V +  
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM--RCMTSDG--ILPNTVSFDC 588

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G+ LKA  +F +M      P   TY ++L+GL +   + +    L  +  + 
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
              D V+   ++    ++G+L  A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKA 672



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 279/609 (45%), Gaps = 92/609 (15%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           SV++ L  +   K  P V  F+ LI      G  E++ ++ +K+E     P I   N +L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +   KKG+F +  E  + M   G+ ADV TY +LI   C    + K   L  +M  + I 
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y  LI+G  NE K++ A  +   M   G+ PN  T+NAL+DG+    +   AL+ 
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--------------------- 250
           ++ M    L P+ V++GVL+DGLCK  E   A  F++ M                     
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455

Query: 251 --------------AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP---- 292
                         +K G+ P+I  Y+ LI+G CK G    A  +   + +  +SP    
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515

Query: 293 -------------------------------DVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
                                          D FT+N+L+  LC  G++  AE  ++ M 
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +GIL N V+++ LI+GY   G+  KA SV  +MT+ G  P   T+ SL+ G CK G++ 
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635

Query: 382 AAMGLYTEMVIKSL--VP---DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            A     E  +KSL  VP   D V++  L+  + K GN+ + + L+ EM++  I P  +T
Sbjct: 636 EA-----EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI GL + G+   A+ F  E   +   G   PN V+Y   +  +   GQ  KA   F
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEAR---GNVLPNKVMYTCFVDGMFKAGQ-WKAGIYF 746

Query: 497 SDMRSDNL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            + + DNL   PD  T   M+ G  R  ++     LL +M      P+     +++ GY 
Sbjct: 747 RE-QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805

Query: 555 ENGDLKSAF 563
           +  D+ ++F
Sbjct: 806 KRKDVSTSF 814



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 268/596 (44%), Gaps = 74/596 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI      G+ +EAL ++  +E   + P+  +   LL+GL K  +FD    FY
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+    +TY  +ID  C  G + +A+ L +EM   GI+P +V Y+ LI+G C  
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +   A+ +   +   G+ PN   Y+ L+   C++  +  A+  Y  M+      +  TF
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK G++  A  F   M   G+ PN   ++CLI+G+  +G   +A S+  EM K
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P  FTY  L+KGLC  G L  AE  L+ ++      + V YN+L+   CK G++ K
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM----------------------- 384
           A+S+  +M ++ + P+  T++SLI G C+ G    A+                       
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731

Query: 385 -----------GLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                      G+Y    + +L   PD+V   A+IDG S+ G +++T  L  EM      
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSPNHV---- 474
           P++ T + L+HG  K   +S +  F L ++   +G             G C  N +    
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTS--FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 475 ----------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                            +  +I   C +G+I  A  L   M S  +  D  T   M+  L
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            R  R  +  M+L +M K GI P++     ++ G    GD+K+AF   E +   +I
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 246/544 (45%), Gaps = 35/544 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    + G ++EA+ +  ++    + P I   +AL+NG  K G+F +  E    +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  + + Y  LI  CC  G + +A+ +++ MI +G       + +L+  LC   K+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE   R M   G++PN  +++ L++GY    +  +A   + EM      P   T+G L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G LR A  F   +       +  +YN L+   CK+GNL +A+SL  EM +  I
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKAL 349
            PD +TY  LI GLC  G+   A    ++    G +L N V Y   +DG  K G  +  +
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               QM   G  P++VT +++IDG  + G I+    L  EM  ++  P++  +  L+ G 
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKTD- 465
           SK  ++  +  LY+ ++   I P   T  SL+ G+ ++  +   L     F+ +  + D 
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 864

Query: 466 -------GGYCSPNHVLYA--------------------AIIQALCYDGQILKASKLFSD 498
                     C+   + +A                    A++  L  + +  ++  +  +
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    + P++  Y  ++ GL R   +    ++  +MI   I P  V    MVR   + G 
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984

Query: 559 LKSA 562
              A
Sbjct: 985 ADEA 988



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 229/495 (46%), Gaps = 8/495 (1%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFY 107
            N  ++STLI     MG ++EA+ +Y  + +    +     N L+  L K GK     EF 
Sbjct: 512  NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
              M   G++ + V++  LI+     G+ +KA ++FDEM   G  PT   Y  L+ GLC  
Sbjct: 572  RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
              + EAE   +S+       +   YN L+   CK  ++ +A+  + EM+  ++ P+  T+
Sbjct: 632  GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 228  GVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+ GLC+ G+   A  F     A+  V PN  +Y C +DG  KAG     +    +M+
Sbjct: 692  TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                +PD+ T N +I G   +G++E    LL +M  +    N+ TYN L+ GY K  D+ 
Sbjct: 752  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
             +  +   +   G+ P+ +T  SL+ G C++  ++  + +    + + +  D   F  LI
Sbjct: 812  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871

Query: 407  DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                 +G +     L K M    I+    T  +++  L +N R   +     E + +   
Sbjct: 872  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-- 929

Query: 467  GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               SP    Y  +I  LC  G I  A  +  +M +  + P N   + M+R L +  +  +
Sbjct: 930  --ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987

Query: 527  VMMLLADMIKMGIVP 541
              +LL  M+KM +VP
Sbjct: 988  ATLLLRFMLKMKLVP 1002



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 244/540 (45%), Gaps = 50/540 (9%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F  LI  +   G   +A  V+    K+   P      +LL GL K G      +F 
Sbjct: 582  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            + +       D V Y  L+   C  G++ KA++LF EM+ + I P    YT LI GLC +
Sbjct: 642  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701

Query: 168  NKMV-------EAES-----------------MFRS------------MRECGVVPNLYT 191
             K V       EAE+                 MF++            M   G  P++ T
Sbjct: 702  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761

Query: 192  YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
             NA++DGY ++  + +  +   EM + N  PN+ T+ +L+ G  K  ++  +   +  + 
Sbjct: 762  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              G+ P+    + L+ G C++  L   + +        +  D +T+N+LI   C  G++ 
Sbjct: 822  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             A  L++ M   GI  +  T ++++    +    +++  V  +M+++G+ P    +  LI
Sbjct: 882  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            +G C+ G+I  A  +  EM+   + P  V  +A++  L+K G   E   L + ML+ K+ 
Sbjct: 942  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTD---KTDGGYCSPNHVLYAAIIQALCYDGQ 488
            P++ + ++L+H   KNG +  AL   +  ++   K D        V Y  +I  LC  G 
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD-------LVSYNVLITGLCAKGD 1054

Query: 489  ILKASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +  A +L+ +M+ D    +  TY  ++RGLL R        ++L D++  G +    ++Q
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1114



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 202/414 (48%), Gaps = 16/414 (3%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++  + R C   P++Y  + L+  Y +   +  +LE +  M  +   P+V T   ++  +
Sbjct: 151 ALMTTYRLCNSNPSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 208

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K GE  +  +F   M K  + P++  +N LI+  C  G+  ++  L  +MEK   +P +
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 268

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN ++   C  G+ + A  LL  M  +G+ A+V TYN LI   C+   + K   +   
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ + PN VT+++LI+G    G +  A  L  EM+   L P+ V F ALIDG   +GN
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388

Query: 415 MKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            KE L+++  M+EAK +TPS  +   L+ GL KN     A  F++        G C    
Sbjct: 389 FKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN---GVC-VGR 443

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  +I  LC +G + +A  L ++M  D + PD  TY+ ++ G  +  R      ++  
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           + ++G+ P+ +I   ++      G LK A R  E +          EGHT   F
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--------LEGHTRDHF 549


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 289/564 (51%), Gaps = 15/564 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y  AR ++K+++   L S K   V    F AL  +  +   NPSV+  LI  
Sbjct: 80  HILVRARMYDPARHILKELS---LMSGKSSFV----FGALMTTYRLCNSNPSVYDILIRV 132

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+++L ++R + +    P++  CNA+L  ++K G+  SVW F +EM+   +  D
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 192

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G   K+  L  +M   G  PT+V Y  ++H  C + +   A  +  
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M+  GV  ++ TYN L+   C+   + +      +M    + PN VT+  L++G    G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A      M  FG+ PN   +N LIDGH   GN  EA+ +   ME   ++P   +Y 
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+ GLC   + + A G   +M + G+    +TY  +IDG CK G +++A+ + ++M++ 
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++P++VT+S+LI+G CK G    A  +   +    L P+ ++++ LI    + G +KE 
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           +R+Y+ M+    T   FT + L+  L K G+++ A  F   +   +DG    PN V +  
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM--RCMTSDG--ILPNTVSFDC 548

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G+ LKA  +F +M      P   TY ++L+GL +   + +    L  +  + 
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
              D V+   ++    ++G+L  A
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKA 632



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 279/609 (45%), Gaps = 92/609 (15%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           SV++ L  +   K  P V  F+ LI      G  E++ ++ +K+E     P I   N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +   KKG+F +  E  + M   G+ ADV TY +LI   C    + K   L  +M  + I 
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y  LI+G  NE K++ A  +   M   G+ PN  T+NAL+DG+    +   AL+ 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--------------------- 250
           ++ M    L P+ V++GVL+DGLCK  E   A  F++ M                     
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 251 --------------AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP---- 292
                         +K G+ P+I  Y+ LI+G CK G    A  +   + +  +SP    
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 293 -------------------------------DVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
                                          D FT+N+L+  LC  G++  AE  ++ M 
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +GIL N V+++ LI+GY   G+  KA SV  +MT+ G  P   T+ SL+ G CK G++ 
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 382 AAMGLYTEMVIKSL--VP---DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            A     E  +KSL  VP   D V++  L+  + K GN+ + + L+ EM++  I P  +T
Sbjct: 596 EA-----EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI GL + G+   A+ F  E   +   G   PN V+Y   +  +   GQ  KA   F
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEAR---GNVLPNKVMYTCFVDGMFKAGQ-WKAGIYF 706

Query: 497 SDMRSDNL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            + + DNL   PD  T   M+ G  R  ++     LL +M      P+     +++ GY 
Sbjct: 707 RE-QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765

Query: 555 ENGDLKSAF 563
           +  D+ ++F
Sbjct: 766 KRKDVSTSF 774



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 268/596 (44%), Gaps = 74/596 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI      G+ +EAL ++  +E   + P+  +   LL+GL K  +FD    FY
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+    +TY  +ID  C  G + +A+ L +EM   GI+P +V Y+ LI+G C  
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +   A+ +   +   G+ PN   Y+ L+   C++  +  A+  Y  M+      +  TF
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK G++  A  F   M   G+ PN   ++CLI+G+  +G   +A S+  EM K
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P  FTY  L+KGLC  G L  AE  L+ ++      + V YN+L+   CK G++ K
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM----------------------- 384
           A+S+  +M ++ + P+  T++SLI G C+ G    A+                       
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691

Query: 385 -----------GLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                      G+Y    + +L   PD+V   A+IDG S+ G +++T  L  EM      
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSPNHV---- 474
           P++ T + L+HG  K   +S +  F L ++   +G             G C  N +    
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTS--FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 475 ----------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                            +  +I   C +G+I  A  L   M S  +  D  T   M+  L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            R  R  +  M+L +M K GI P++     ++ G    GD+K+AF   E +   +I
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 246/544 (45%), Gaps = 35/544 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    + G ++EA+ +  ++    + P I   +AL+NG  K G+F +  E    +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  + + Y  LI  CC  G + +A+ +++ MI +G       + +L+  LC   K+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE   R M   G++PN  +++ L++GY    +  +A   + EM      P   T+G L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G LR A  F   +       +  +YN L+   CK+GNL +A+SL  EM +  I
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKAL 349
            PD +TY  LI GLC  G+   A    ++    G +L N V Y   +DG  K G  +  +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               QM   G  P++VT +++IDG  + G I+    L  EM  ++  P++  +  L+ G 
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKTD- 465
           SK  ++  +  LY+ ++   I P   T  SL+ G+ ++  +   L     F+ +  + D 
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824

Query: 466 -------GGYCSPNHVLYA--------------------AIIQALCYDGQILKASKLFSD 498
                     C+   + +A                    A++  L  + +  ++  +  +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    + P++  Y  ++ GL R   +    ++  +MI   I P  V    MVR   + G 
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944

Query: 559 LKSA 562
              A
Sbjct: 945 ADEA 948



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 237/517 (45%), Gaps = 8/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFY 107
           N  ++STLI     MG ++EA+ +Y  + +    +     N L+  L K GK     EF 
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G++ + V++  LI+     G+ +KA ++FDEM   G  PT   Y  L+ GLC  
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EAE   +S+       +   YN L+   CK  ++ +A+  + EM+  ++ P+  T+
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 228 GVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             L+ GLC+ G+   A  F     A+  V PN  +Y C +DG  KAG     +    +M+
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PD+ T N +I G   +G++E    LL +M  +    N+ TYN L+ GY K  D+ 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            +  +   +   G+ P+ +T  SL+ G C++  ++  + +    + + +  D   F  LI
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                +G +     L K M    I+    T  +++  L +N R   +     E + +   
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-- 889

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              SP    Y  +I  LC  G I  A  +  +M +  + P N   + M+R L +  +  +
Sbjct: 890 --ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +LL  M+KM +VP       ++    +NG++  A 
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 244/537 (45%), Gaps = 44/537 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F  LI  +   G   +A  V+    K+   P      +LL GL K G      +F 
Sbjct: 542  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            + +       D V Y  L+   C  G++ KA++LF EM+ + I P    YT LI GLC +
Sbjct: 602  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661

Query: 168  NKMV-------EAES-----------------MFRS------------MRECGVVPNLYT 191
             K V       EAE+                 MF++            M   G  P++ T
Sbjct: 662  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721

Query: 192  YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
             NA++DGY ++  + +  +   EM + N  PN+ T+ +L+ G  K  ++  +   +  + 
Sbjct: 722  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              G+ P+    + L+ G C++  L   + +        +  D +T+N+LI   C  G++ 
Sbjct: 782  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             A  L++ M   GI  +  T ++++    +    +++  V  +M+++G+ P    +  LI
Sbjct: 842  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            +G C+ G+I  A  +  EM+   + P  V  +A++  L+K G   E   L + ML+ K+ 
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P++ + ++L+H   KNG +  AL     +   ++ G    + V Y  +I  LC  G +  
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALEL---RVVMSNCGL-KLDLVSYNVLITGLCAKGDMAL 1017

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            A +L+ +M+ D    +  TY  ++RGLL R        ++L D++  G +    ++Q
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 202/414 (48%), Gaps = 16/414 (3%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++  + R C   P++Y  + L+  Y +   +  +LE +  M  +   P+V T   ++  +
Sbjct: 111 ALMTTYRLCNSNPSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K GE  +  +F   M K  + P++  +N LI+  C  G+  ++  L  +MEK   +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN ++   C  G+ + A  LL  M  +G+ A+V TYN LI   C+   + K   +   
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ + PN VT+++LI+G    G +  A  L  EM+   L P+ V F ALIDG   +GN
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 415 MKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            KE L+++  M+EAK +TPS  +   L+ GL KN     A  F++        G C    
Sbjct: 349 FKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN---GVCV-GR 403

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  +I  LC +G + +A  L ++M  D + PD  TY+ ++ G  +  R      ++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           + ++G+ P+ +I   ++      G LK A R  E +          EGHT   F
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--------LEGHTRDHF 509


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 289/564 (51%), Gaps = 15/564 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y  AR ++K+++   L S K   V    F AL  +  +   NPSV+  LI  
Sbjct: 80  HILVRARMYDPARHILKELS---LMSGKSSFV----FGALMTTYRLCNSNPSVYDILIRV 132

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+++L ++R + +    P++  CNA+L  ++K G+  SVW F +EM+   +  D
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 192

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G   K+  L  +M   G  PT+V Y  ++H  C + +   A  +  
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M+  GV  ++ TYN L+   C+   + +      +M    + PN VT+  L++G    G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A      M  FG+ PN   +N LIDGH   GN  EA+ +   ME   ++P   +Y 
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+ GLC   + + A G   +M + G+    +TY  +IDG CK G +++A+ + ++M++ 
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++P++VT+S+LI+G CK G    A  +   +    L P+ ++++ LI    + G +KE 
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           +R+Y+ M+    T   FT + L+  L K G+++ A  F   +   +DG    PN V +  
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM--RCMTSDG--ILPNTVSFDC 548

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G+ LKA  +F +M      P   TY ++L+GL +   + +    L  +  + 
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
              D V+   ++    ++G+L  A
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKA 632



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 279/609 (45%), Gaps = 92/609 (15%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           SV++ L  +   K  P V  F+ LI      G  E++ ++ +K+E     P I   N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +   KKG+F +  E  + M   G+ ADV TY +LI   C    + K   L  +M  + I 
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y  LI+G  NE K++ A  +   M   G+ PN  T+NAL+DG+    +   AL+ 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--------------------- 250
           ++ M    L P+ V++GVL+DGLCK  E   A  F++ M                     
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 251 --------------AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP---- 292
                         +K G+ P+I  Y+ LI+G CK G    A  +   + +  +SP    
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 293 -------------------------------DVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
                                          D FT+N+L+  LC  G++  AE  ++ M 
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +GIL N V+++ LI+GY   G+  KA SV  +MT+ G  P   T+ SL+ G CK G++ 
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 382 AAMGLYTEMVIKSL--VP---DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            A     E  +KSL  VP   D V++  L+  + K GN+ + + L+ EM++  I P  +T
Sbjct: 596 EA-----EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI GL + G+   A+ F  E   +   G   PN V+Y   +  +   GQ  KA   F
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEAR---GNVLPNKVMYTCFVDGMFKAGQ-WKAGIYF 706

Query: 497 SDMRSDNL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            + + DNL   PD  T   M+ G  R  ++     LL +M      P+     +++ GY 
Sbjct: 707 RE-QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765

Query: 555 ENGDLKSAF 563
           +  D+ ++F
Sbjct: 766 KRKDVSTSF 774



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 268/596 (44%), Gaps = 74/596 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI      G+ +EAL ++  +E   + P+  +   LL+GL K  +FD    FY
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+    +TY  +ID  C  G + +A+ L +EM   GI+P +V Y+ LI+G C  
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +   A+ +   +   G+ PN   Y+ L+   C++  +  A+  Y  M+      +  TF
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK G++  A  F   M   G+ PN   ++CLI+G+  +G   +A S+  EM K
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P  FTY  L+KGLC  G L  AE  L+ ++      + V YN+L+   CK G++ K
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM----------------------- 384
           A+S+  +M ++ + P+  T++SLI G C+ G    A+                       
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691

Query: 385 -----------GLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                      G+Y    + +L   PD+V   A+IDG S+ G +++T  L  EM      
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSPNHV---- 474
           P++ T + L+HG  K   +S +  F L ++   +G             G C  N +    
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTS--FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 475 ----------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                            +  +I   C +G+I  A  L   M S  +  D  T   M+  L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            R  R  +  M+L +M K GI P++     ++ G    GD+K+AF   E +   +I
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 246/544 (45%), Gaps = 35/544 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    + G ++EA+ +  ++    + P I   +AL+NG  K G+F +  E    +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  + + Y  LI  CC  G + +A+ +++ MI +G       + +L+  LC   K+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE   R M   G++PN  +++ L++GY    +  +A   + EM      P   T+G L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G LR A  F   +       +  +YN L+   CK+GNL +A+SL  EM +  I
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKAL 349
            PD +TY  LI GLC  G+   A    ++    G +L N V Y   +DG  K G  +  +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               QM   G  P++VT +++IDG  + G I+    L  EM  ++  P++  +  L+ G 
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKTD- 465
           SK  ++  +  LY+ ++   I P   T  SL+ G+ ++  +   L     F+ +  + D 
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824

Query: 466 -------GGYCSPNHVLYA--------------------AIIQALCYDGQILKASKLFSD 498
                     C+   + +A                    A++  L  + +  ++  +  +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    + P++  Y  ++ GL R   +    ++  +MI   I P  V    MVR   + G 
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944

Query: 559 LKSA 562
              A
Sbjct: 945 ADEA 948



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 237/517 (45%), Gaps = 8/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFY 107
           N  ++STLI     MG ++EA+ +Y  + +    +     N L+  L K GK     EF 
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G++ + V++  LI+     G+ +KA ++FDEM   G  PT   Y  L+ GLC  
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EAE   +S+       +   YN L+   CK  ++ +A+  + EM+  ++ P+  T+
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 228 GVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             L+ GLC+ G+   A  F     A+  V PN  +Y C +DG  KAG     +    +M+
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PD+ T N +I G   +G++E    LL +M  +    N+ TYN L+ GY K  D+ 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            +  +   +   G+ P+ +T  SL+ G C++  ++  + +    + + +  D   F  LI
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                +G +     L K M    I+    T  +++  L +N R   +     E + +   
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-- 889

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              SP    Y  +I  LC  G I  A  +  +M +  + P N   + M+R L +  +  +
Sbjct: 890 --ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +LL  M+KM +VP       ++    +NG++  A 
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 244/537 (45%), Gaps = 44/537 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F  LI  +   G   +A  V+    K+   P      +LL GL K G      +F 
Sbjct: 542  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            + +       D V Y  L+   C  G++ KA++LF EM+ + I P    YT LI GLC +
Sbjct: 602  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661

Query: 168  NKMV-------EAES-----------------MFRS------------MRECGVVPNLYT 191
             K V       EAE+                 MF++            M   G  P++ T
Sbjct: 662  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721

Query: 192  YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
             NA++DGY ++  + +  +   EM + N  PN+ T+ +L+ G  K  ++  +   +  + 
Sbjct: 722  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              G+ P+    + L+ G C++  L   + +        +  D +T+N+LI   C  G++ 
Sbjct: 782  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             A  L++ M   GI  +  T ++++    +    +++  V  +M+++G+ P    +  LI
Sbjct: 842  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            +G C+ G+I  A  +  EM+   + P  V  +A++  L+K G   E   L + ML+ K+ 
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P++ + ++L+H   KNG +  AL     +   ++ G    + V Y  +I  LC  G +  
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALEL---RVVMSNCGL-KLDLVSYNVLITGLCAKGDMAL 1017

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            A +L+ +M+ D    +  TY  ++RGLL R        ++L D++  G +    ++Q
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 202/414 (48%), Gaps = 16/414 (3%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++  + R C   P++Y  + L+  Y +   +  +LE +  M  +   P+V T   ++  +
Sbjct: 111 ALMTTYRLCNSNPSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K GE  +  +F   M K  + P++  +N LI+  C  G+  ++  L  +MEK   +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN ++   C  G+ + A  LL  M  +G+ A+V TYN LI   C+   + K   +   
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ + PN VT+++LI+G    G +  A  L  EM+   L P+ V F ALIDG   +GN
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 415 MKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            KE L+++  M+EAK +TPS  +   L+ GL KN     A  F++        G C    
Sbjct: 349 FKEALKMFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN---GVCV-GR 403

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  +I  LC +G + +A  L ++M  D + PD  TY+ ++ G  +  R      ++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           + ++G+ P+ +I   ++      G LK A R  E +          EGHT   F
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--------LEGHTRDHF 509


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 255/474 (53%), Gaps = 4/474 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N ++  L+K   + +    +++M + G+  D+ T  +LI+C C  G +  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P  +    L+ GLC + ++ ++      +   G   +  +Y  L++G CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   AL+    +   + +PNVV +  ++DGLCK   +  A + +  M   G+FPN+  
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C AG L EA  L +EM    I+P+V+TY IL+  LC  G+++ A+ LL  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           KEG+  NVV+YN+L+DGYC  G+++ A  +   M +KGV PNV +++ +ID  CK+  +D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L  E++ K++VP+ V +++LIDG  K G +   L L KEM        V T +SL+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A   F++  ++       PN   Y A+I  LC  G+   A KLF  +  
Sbjct: 368 DALCKNQNLDKATALFMKMKERG----IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLV 423

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              R +  TY  M+ GL +   + + + + + M + G +PDAV  ++++R   E
Sbjct: 424 KGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 158/473 (33%), Positives = 256/473 (54%), Gaps = 9/473 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +  +    +++    P +F+   LI  F  +G +  +  V  KI  L   P     N L+
Sbjct: 28  TAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLM 87

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            GL  KG+      F++++V  G   D V+Y  L++  C  G+   AL L   + D+   
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTR 147

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV+Y  +I GLC +  + EA  ++  M   G+ PN+ TY+ L+ G+C    +  A   
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            +EM+  N+ PNV T+ +LMD LCK G+++ A N    M K GV PN+  YN L+DG+C 
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  +   M +  ++P+V++YNI+I  LC   +++ A  LL+++  + ++ N VT
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLIDG+CK G +  AL +  +M  +G   +VVT++SL+D  CK  N+D A  L+ +M 
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P+   +TALIDGL K G  K   +L++ +L      +V+T + +I GL K G + 
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            AL     K+   + G C P+ V +  II++L    Q  KA KL  +M + +L
Sbjct: 448 EALAM---KSKMEENG-CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 254/484 (52%), Gaps = 7/484 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ ++ +  +M H   A+ ++++++V    P +   N L+N     G+    +    +++
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   + +T   L+   C +G+V K+L+  D+++ +G +   V Y  L++GLC   +  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R + +    PN+  YN ++DG CK   VN A + Y EM    + PNV+T+  L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C  G+L  A      M    + PN++ Y  L+D  CK G + EA +L + M K  + 
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V +YN L+ G C +G+++ A+ +   M ++G+  NV +YN +ID  CK   +++A+++
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             ++  K + PN VT+SSLIDG CK G I +A+ L  EM  +    DVV +T+L+D L K
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           + N+ +   L+ +M E  I P+ +T ++LI GL K GR  NA   F     K     C  
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG----CRI 428

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  +I  LC +G + +A  + S M  +   PD  T+  ++R L    +      LL
Sbjct: 429 NVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLL 488

Query: 532 ADMI 535
            +MI
Sbjct: 489 HEMI 492



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/435 (34%), Positives = 239/435 (54%), Gaps = 4/435 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M  KGIEP +    ILI+  C+  +M  + ++   + + G  PN  T N LM 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C   +V ++L F+ +++    Q + V++  L++GLCK+GE R+A      +      P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +IDG CK   + EA  L SEM+   I P+V TY+ LI G C  GQL  A GLL
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  + I  NV TY  L+D  CKEG +++A ++ + MT++GV+PNVV++++L+DG C  
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  ++  MV K + P+V  +  +ID L K   + E + L +E+L   + P+  T 
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI G  K GRI++AL+   E   +        + V Y +++ ALC +  + KA+ LF 
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQ----PADVVTYTSLLDALCKNQNLDKATALFM 384

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M+   ++P+  TYT ++ GL +  R  +   L   ++  G   +     VM+ G  + G
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEG 444

Query: 558 DLKSAFRCSEFLKES 572
            L  A      ++E+
Sbjct: 445 MLDEALAMKSKMEEN 459



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 195/380 (51%), Gaps = 38/380 (10%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+    ++G    AL + R IE     P +   N +++GL K    +  ++ Y EM 
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  +V+TY  LI   C  G +M+A  L +EMI K I P V  YTIL+  LC E K+ 
Sbjct: 178 ARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVK 237

Query: 172 EAES-----------------------------------MFRSMRECGVVPNLYTYNALM 196
           EA++                                   MF +M + GV PN+Y+YN ++
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D  CK   V+ A+    E+LH N+ PN VT+  L+DG CK+G + +A +    M   G  
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++  Y  L+D  CK  NL +A +L  +M++  I P+ +TY  LI GLC  G+ + A+ L
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            Q +  +G   NV TYN +I G CKEG +++AL++ S+M E G  P+ VTF  +I    +
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477

Query: 377 AGNIDAAMGLYTEMVIKSLV 396
               D A  L  EM+ K L+
Sbjct: 478 KDQNDKAEKLLHEMIAKDLL 497



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 194/393 (49%), Gaps = 4/393 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P +  +N ++    K+     A+  + +M    ++P++ T  +L++  C +G++  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               + K G  PN    N L+ G C  G + +++    ++       D  +Y  L+ GLC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G+   A  LL+ +       NVV YN++IDG CK+  + +A  + S+M  +G+ PNV+
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+S+LI G C AG +  A GL  EM++K++ P+V  +T L+D L K+G +KE   L   M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            +  + P+V + ++L+ G    G + NA   F     K      +PN   Y  +I  LC 
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG----VNPNVYSYNIMIDRLCK 302

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
             ++ +A  L  ++   N+ P+  TY++++ G  +  R+   + LL +M   G   D V 
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
              ++    +N +L  A      +KE  I  ++
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 83/209 (39%), Gaps = 39/209 (18%)

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH------- 442
           M++    P ++ F  ++  L K  +    + L+K+M    I P +FT++ LI+       
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 443 ----------------------------GLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
                                       GL   G +  +L+F     DK        + V
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFH----DKVVAQGFQMDQV 116

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            YA ++  LC  G+   A KL   +   + RP+   Y T++ GL + K + +   L ++M
Sbjct: 117 SYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              GI P+ +    ++ G+   G L  AF
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAF 205


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 278/536 (51%), Gaps = 15/536 (2%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALW-VYR--KIEVLPAIQACN 88
           HH+  S      SL  P+ N    S   I+      I++AL   YR  ++   P++    
Sbjct: 45  HHITTSTCTKKRSL--PQNNGGFLSNNSIS------IDDALASFYRMLRMNPRPSVVEFG 96

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
             L  + KK ++ +V     +M L G+  +V +  +LI+C C    V+ A+++  +M   
Sbjct: 97  RFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKL 156

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI+P  + +  LI+G C E ++ EA  +F  M   G  P++ +Y+ +++G CK  + + A
Sbjct: 157 GIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMA 216

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+   +M     +PN+V +  ++D LCK   +  A +    M   G+ P++  Y+ ++ G
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C  G+L EA  L +EM    + P+  T+ IL+ GLC  G +  A  + + M K+G   N
Sbjct: 277 FCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
             TYN+L+DGYC    M++A  V   M +KG  P V +++ LI+G CK   +D A  L  
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K L PD V ++ L+ GL + G  +E L L+KEM  + + P + T S+L+ GL K+G
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +  AL       +        P+ VLY  +I+ +   G++  A +LFS + +D ++P  
Sbjct: 457 HLDEALKLLKSMQESK----IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            TYT M++GLL+     +   L   M   G +P++    V+++G+ +N D  +A R
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 247/467 (52%), Gaps = 4/467 (0%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + + N L+N L +            +M   G+  D +T+  LI+  C +G++ +A+ LF+
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+ +G +P V+ Y+ +I+GLC       A  + R M E G  PNL  Y  ++D  CK  
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            VN A++   EM+   + P+VVT+  ++ G C +G L  A   F  M    V PN   + 
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+DG CK G + EA  +   M K    P+ +TYN L+ G C   Q++ A+ +L  M  +
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK 366

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G    V +YN LI+GYCK   +++A S+  +M+EK + P+ VT+S+L+ G C+ G    A
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L+ EM    L+PD++ ++ L+DGL K G++ E L+L K M E+KI P +   + LI G
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           +F  G++  A   F     K       P    Y  +I+ L  +G   +A +LF  M  D 
Sbjct: 487 MFIAGKLEVAKELF----SKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
             P++C+Y  +++G L+ +     + L+ +M+      D+   Q+++
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 254/484 (52%), Gaps = 9/484 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALL 91
           +V +  N +++     +V+S   LI     + H+  A+ V  K   + + P     N L+
Sbjct: 110 TVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLI 169

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NG   +G+       + EMV  G   DV++Y  +I+  C  G+   AL L  +M +KG +
Sbjct: 170 NGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCK 229

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +V YT +I  LC +  + +A  +   M + G+ P++ TY+ ++ G+C +  +N A   
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           ++EM+  N+ PN VTF +L+DGLCK G +  A   F  M K G  PN + YN L+DG+C 
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  +   M     +P V +YNILI G C   +L+ A+ LL +M ++ +  + VT
Sbjct: 350 NNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++L+ G C+ G  ++AL++  +M   G+ P+++T+S+L+DG CK G++D A+ L   M 
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ 469

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              + PD+V++  LI+G+   G ++    L+ ++    I P++ T + +I GL K G   
Sbjct: 470 ESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSD 529

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   F +  D  DG    PN   Y  IIQ    +     A +L  +M       D+ T+
Sbjct: 530 EAYELFRKMED--DGFL--PNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585

Query: 512 TTML 515
             +L
Sbjct: 586 QMLL 589



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 199/396 (50%), Gaps = 38/396 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +ST+I    + G+   AL + RK+E     P + A   +++ L K    +   +   EMV
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  DVVTY  ++   C  G + +A  LF+EM+ + + P  V +TIL+ GLC E  + 
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319

Query: 172 EAESMFRSMRECGVVPNLYTYNALM----------------------------------- 196
           EA  +F +M + G  PN YTYNALM                                   
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +GYCK   ++ A     EM    L P+ VT+  LM GLC+VG  + A N F  M   G+ 
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  Y+ L+DG CK G+L EA+ L   M++ +I PD+  YNILI+G+   G+LE A+ L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             K++ +GI   + TY  +I G  KEG  ++A  +  +M + G  PN  +++ +I G  +
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             +   A+ L  EMV K    D   F  L+D  S+D
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRD 595


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/570 (30%), Positives = 278/570 (48%), Gaps = 48/570 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           K +  V++ LI    +   I EAL      E+   +       N +   GKF+     ++
Sbjct: 163 KLSIVVYNVLIHGLCKSRRIWEAL------EIKNCLMQKGLEANVVTYYGKFNEAELLFK 216

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   GL A+ +TY +LID  C +G++  A+   D+M    IE TV  Y  LI+G C   
Sbjct: 217 EMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLG 276

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
               A+  F  M + G+ P + TY +L+ GYC   + ++A + Y+EM    + PN  TF 
Sbjct: 277 NASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFT 336

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ GLC+   +  A   F  M +  + P+   YN +I+GHC++GN+ EA  L  EM   
Sbjct: 337 AIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGK 396

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD +TY  LI GLC VG++  A+  +  ++K+    N + Y++L+ GYCKEG  + A
Sbjct: 397 GFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDA 456

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           +S C  M E+GV  ++V ++ LIDG  +  +  A  GL  EM    L PD V++T +ID 
Sbjct: 457 VSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDR 516

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            SK GN+KE   L+  M++    P+V T ++LI+GL K G +  A     ++T  +D   
Sbjct: 517 HSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA-ELLSKETLVSD--- 572

Query: 469 CSPNHVLYAA----------------------------------IIQALCYDGQILKASK 494
            +PNH+ Y                                    +I+  C  G+I +A+K
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATK 632

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L   M  +++ PD  TY+T++    +   + + + L   M+  G+ PD +    +V G  
Sbjct: 633 LLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCC 692

Query: 555 ENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
             G+L+ AF     L++  I       H T
Sbjct: 693 IAGELEKAFE----LRDEMIRRGMRSNHVT 718



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 214/455 (47%), Gaps = 30/455 (6%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +M +LN    M D  + P V   + L++GL    +  +   +F  +    V P++Y Y+A
Sbjct: 77  MMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSA 136

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK------------------ 236
           ++   C++ D N+A E  H M  +  + ++V + VL+ GLCK                  
Sbjct: 137 VVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKG 196

Query: 237 --------VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
                    G+   A   F  M + G+  N   Y+ LID  C+ G +  A+    +M K 
Sbjct: 197 LEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I   V+ YN LI G C +G    A+    +M  +G+   VVTY SLI GYC EG+  KA
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V ++MT KG+ PN  TF+++I G C+A  +  A+ L+ EM  + ++P  V +  +I+G
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + GN+ E   L  EM+     P  +T   LI GL   GR+S A  F     D     +
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEF----VDDLHKDH 432

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              N++ Y+A++   C +G+   A      M    +  D   Y  ++ G  R      + 
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            LL +M   G+ PDAVI   M+  + + G+LK AF
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 199/410 (48%), Gaps = 5/410 (1%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNA 89
           H  + V+N + +  I   N   F+ +I        + EA+ ++   ++ +++P+    N 
Sbjct: 314 HKAFKVYNEMTAKGISP-NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNV 372

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ G  + G     +   +EMV  G V D  TY  LI   C  G V +A    D++    
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +   + Y+ L+HG C E +  +A S  R M E GV  +L  Y  L+DG  +  D     
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM +H L+P+ V +  ++D   K G L+ A   +  M   G  PN+  Y  LI+G 
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG + +A  L  E    +++P+  TY   +  L   G +E A  L   M K G LA  
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATT 611

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V+YN LI G+C+ G +E+A  +   MT+  + P+ +T+S++I  QCK  N+  A+ L+  
Sbjct: 612 VSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHT 671

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           M+ K L PD + ++ L+ G    G +++   L  EM+   +  +  T  S
Sbjct: 672 MLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 185/410 (45%), Gaps = 40/410 (9%)

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           NL P V T   L++GL +          F  +    V P+I++Y+ ++   C+  +  +A
Sbjct: 91  NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKA 150

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCG--------------------------VGQLEG 312
             +   ME  +    +  YN+LI GLC                            G+   
Sbjct: 151 KEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNE 210

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           AE L ++M ++G+ AN +TY+ LID +C+ G+M+ A+    +MT+  +E  V  ++SLI+
Sbjct: 211 AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN 270

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK GN  AA   + EM+ K L P VV +T+LI G   +G   +  ++Y EM    I+P
Sbjct: 271 GYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISP 330

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           + +T +++I GL +   ++ A+  F E  ++       P+ V Y  +I+  C  G I +A
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERK----IMPSEVTYNVMIEGHCRSGNISEA 386

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  +M      PD  TY  ++ GL    R+ +    + D+ K     + +    +V G
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 553 YQENGDLKSAFRCSEFLKESRIG----------SSETEGHTTRSFLGHLK 592
           Y + G  K A      + E  +                 H TR+  G LK
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 6/239 (2%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEA--LWVYRKIE- 79
           L+      H   ++F  L  +      P   +++ +I   S+ G+++EA  LW     E 
Sbjct: 478 LIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG 537

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            LP +    AL+NGL K G  D      +E ++  +  + +TYG  +D     G++ KA+
Sbjct: 538 CLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAV 597

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M+ KG   T V Y ILI G C   K+ EA  +   M +  ++P+  TY+ ++   
Sbjct: 598 QLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQ 656

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           CK +++  A++ +H ML   L+P+ + +  L+ G C  GEL  A      M + G+  N
Sbjct: 657 CKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 266/508 (52%), Gaps = 8/508 (1%)

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLV 116
           A S   +I++AL  +  +   + LP I   N LL+ +++ +  +D+V    ++M L GL 
Sbjct: 64  ASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLS 123

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +  T  +LI+C C    V    ++  ++I  G++PT++ +T LI+GLC   +  +A  +
Sbjct: 124 PNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALEL 183

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F  M   G  P++YTY  +++G CK+ +   A     +M     QP+VVT+  L+D LCK
Sbjct: 184 FDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK 243

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
              +  A + F +M   G+ P +  Y  LI G C      EA ++ +EM    I PD+ T
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +++LI   C  G +  A+G+L+ M + G+  NV+TYNSL+ GY  + ++ +A  +   M 
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMI 363

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G +P+V ++S LI+G C    ID A  L+ EM+ + L P+ V +T LI    + G ++
Sbjct: 364 TRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR 423

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L+K+M      P + T S L+ G  K G +  A   F        G Y  PN V+Y
Sbjct: 424 EARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF----RAMQGTYLKPNLVMY 479

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I ++C  G +  A KLFS++    L+PD   YTT++ GL +   + + +     M +
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFR 564
            G  P+     V++RG+ ++ D   A +
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQ 567



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/479 (31%), Positives = 240/479 (50%), Gaps = 9/479 (1%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +V +    +E+   +P+    + LI  F  M H++    V  K+  L   P I     L+
Sbjct: 109 AVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLI 168

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL K G+F    E +++MV  G   DV TY  +I+  C  G+   A  L  +M + G +
Sbjct: 169 NGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQ 228

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y+ LI  LC +  + EA  +F  M+  G+ P + +Y +L+ G C  +    A   
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAM 288

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            +EM   N+ P++VTF +L+D  CK G +  A      M + GV PN+  YN L+ G+  
Sbjct: 289 LNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EA  L   M      PDVF+Y+ILI G C V +++ A+ L  +M  +G+  N V+
Sbjct: 349 QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y +LI  +C+ G + +A  +   M   G  P++ T+S L++G CK G +  A  L+  M 
Sbjct: 409 YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P++V++T LID + K GN+    +L+ E+    + P V   +++I+GL K G + 
Sbjct: 469 GTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLD 528

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            AL  F  +  + DG  C PN   Y  II+         +A +L  +MR      D  T
Sbjct: 529 EALEAF--RKMEEDG--CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET-LRLYKEMLEAKI 430
           D      NID A+  +  M+ +  +P ++ F  L+  + +     +  + L K+M  A +
Sbjct: 63  DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           +P+  T++ LI+       +    +  L K  K       P  + +  +I  LC  G+  
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSV-LAKVIKLG---LQPTIITFTTLINGLCKAGEFA 178

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF DM +   +PD  TYTT++ GL +         L+  M ++G  PD V    ++
Sbjct: 179 QALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLI 238

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSS 577
               ++  +  A     ++K   I  +
Sbjct: 239 DSLCKDRLVNEALDIFSYMKAKGISPT 265


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 262/526 (49%), Gaps = 24/526 (4%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +   N L+ G    G  +    F+ EM   G + +VVTY  +ID  C    + +A 
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M  KG+ P ++ Y ++I+GLC E +M E   +   M +   VP+  T+N L++GY
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C V + ++AL  + EM+ + L PNVVT+  L++ +CK G L  A  F   M   G+ PN 
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  LIDG  + G L +A  +  EM +   +P + TYN LI G C +G++E A GLLQ+
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G + +VV+Y+++I G+C+  ++EKA  +  +M  KG+ P+V T+SSLI G CK   
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +     L+ EM+   L PD V +T+LI+    +G++ + LRL+ EM++   +P + T + 
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA---------------AIIQALC 484
           LI+G  K  R   A    L+   +       PN + Y                A+++  C
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEES----VPNEITYNTLIDNCNNLEFKSALALMKGFC 614

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G + +A ++   M     + +   Y  ++ G  +   +     L  +M+  G  P +V
Sbjct: 615 MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSV 674

Query: 545 INQVMVRG-YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
               + +  Y E  +++        LK  RI    TE    +  +G
Sbjct: 675 TIMALAKSLYHEGKEVELNQLLDYTLKSCRI----TEAALAKVLIG 716



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 234/451 (51%), Gaps = 6/451 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           G +  V++Y  ++D        +K A  +F EM++ G+ P V  Y ILI G C    +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
               F  M   G +PN+ TYN ++D YCK+  +  A +    M    L PN++++ V+++
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC+ G+++        M+K    P+   +N LI+G+C  GN  +A+ L +EM K  +SP
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TY  LI  +C  G L  A   L +M   G+  N  TY +LIDG+ ++G +++A  + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M E G  P ++T+++LI+G C  G ++ A GL  EM+ +  +PDVV ++ +I G  ++
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             +++  +L  EM+   I+P V T SSLI GL K  R+    + F E           P+
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG----LPPD 517

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y ++I A C +G + KA +L  +M      PD  TY  ++ G  +  R  +   LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++    VP+ +    ++     N + KSA 
Sbjct: 578 KLLYEESVPNEITYNTLIDNCN-NLEFKSAL 607



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 172/582 (29%), Positives = 283/582 (48%), Gaps = 29/582 (4%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L ++V  N +           +F  L NS    K + +VF  ++ 
Sbjct: 86  LHILTRYKLYKTAQSLAEEVVVNTVDETGE-----DLFQCLKNSYYQCKSSSAVFDLVVK 140

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE-FYEEMVLCGLV 116
           + + +  I +AL +    +    +P + + NA+L+ +I+  +   + E  ++EMV  G+ 
Sbjct: 141 SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS 200

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY +LI   C  G++   L  F EM   G  P VV Y  +I   C   K+ EA  +
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            R M   G+ PNL +YN +++G C+   +    E   EM      P+ VTF  L++G C 
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           VG    A      M K G+ PN+  Y  LI+  CKAGNL  AM    +M    + P+  T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G    G L+ A  ++++M + G    ++TYN+LI+G+C  G ME A  +  +M 
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E+G  P+VV++S++I G C+   ++ A  L  EMV K + PDV  +++LI GL K   + 
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L++EML   + P   T +SLI+     G +  AL    E   K   G+ SP+ V Y
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK---GF-SPDIVTY 556

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT---------------MLRGLLRA 521
             +I       +  +A +L   +  +   P+  TY T               +++G    
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             M +   +L  M++ G   +  +  V++ G+ + G+++ A+
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 205/432 (47%), Gaps = 53/432 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI  +  +G+  +AL ++ ++    + P +     L+N + K G  +   EF ++M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +  TY  LID    QG + +A  +  EM++ G  PT++ Y  LI+G C   +M
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  + + M E G +P++ +Y+ ++ G+C+  ++ +A +   EM+   + P+V T+  L
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK   L    + F  M   G+ P+   Y  LI+ +C  G+L +A+ L  EM +   
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID------------- 337
           SPD+ TYN+LI G     + + A+ LL K+  E  + N +TYN+LID             
Sbjct: 550 SPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609

Query: 338 --GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
             G+C +G M +A  V   M +KG + N   ++ +I G  K GNI+ A  LY EM+    
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGF 669

Query: 396 VPDVVVFTALIDGL-----------------------------------SKDGNMKETLR 420
            P  V   AL   L                                   SK+GNM     
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFN 729

Query: 421 LYKEMLEAKITP 432
           + K+M  + + P
Sbjct: 730 VLKDMALSGLLP 741



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 154/365 (42%), Gaps = 53/365 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  FS+ G +++A  + +++      P I   NAL+NG    G+ +      
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  G + DVV+Y  +I   C   ++ KA  L  EM+ KGI P V  Y+ LI GLC +
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ E   +F+ M   G+ P+  TY +L++ YC   D+++AL  + EM+     P++VT+
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 228 GVL--------------------------------------------------MDGLCKV 237
            VL                                                  M G C  
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A      M + G   N  VYN +I GH K GN+ +A +L  EM     +P   T 
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L K L   G+      LL    K   +        LI    KEG+M+   +V   M  
Sbjct: 677 MALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMAL 736

Query: 358 KGVEP 362
            G+ P
Sbjct: 737 SGLLP 741


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 272/526 (51%), Gaps = 12/526 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL--PA-IQACNALL 91
           S FN +  ++ P   PSV  F+ ++ + + M H    L + ++++ L  P+ +     ++
Sbjct: 60  SSFNRMLHMQPP---PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      + D  +    ++   G   D  T+  LI   C +G + +AL+LFD+M+ +G +
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y  LIHGLC       A  + RSM +    PN+ TYN ++D   K   VN AL  
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+   + PNV T+  ++ GLCK  E +        M    + PN+ ++  L+D  CK
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  +   M +  + PDV TY  L+ G C   +++ A+ +   M ++G   NV++
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++LI+GYCK   ++KA+ +  +M ++ + PN+VT+++LI G C  G +  A+ L+ EMV
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
               +PD+V +  L+D L K  ++ + + + K +  + + P + + + +I G+ + G + 
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       P+   Y  +I  LC  G + +A+KLF +M +D   PD+CTY
Sbjct: 477 AAGDLFSSLSSKG----LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             + RG LR    L  + LL +M+  G   DA    ++V    ++G
Sbjct: 533 NLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 249/500 (49%), Gaps = 7/500 (1%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I+EAL  + ++   +  P++     +L  +     + +V    ++M   G+ +DV T  +
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +I+  C    V    ++  ++   G +P    +T LI GLC E K+ EA  +F  M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             PN  TY  L+ G CKV +   A+     M+  N +PNV+T+  ++D L K  ++  A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           N F  M   G+ PN+  YN +I G CK        +L +EM   +I P+V  +  L+  L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A  ++  M + G+  +VVTY +L+DG+C   +M++A  V   M  KG  PNV
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           +++S+LI+G CK   ID AM L+ EM  + LVP++V +  LI GL   G +++ + L+ E
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M+ +   P + T   L+  L K   +  A+          +G   +P+   Y  +I  +C
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAML----KAIEGSNLAPDIQSYNIVIDGMC 470

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A  LFS + S  L PD  TYT M+ GL     + +   L  +M   G  PD  
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530

Query: 545 INQVMVRGYQENGDLKSAFR 564
              ++ RG+  N +  SA +
Sbjct: 531 TYNLITRGFLRNNETLSAIQ 550



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 246/492 (50%), Gaps = 8/492 (1%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQA 86
           K +    S+   ++SL IP  +    + +I +F  +  ++    V  KI  L   P    
Sbjct: 88  KHYSTVLSLSKQMDSLGIPS-DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTAT 146

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
              L+ GL  +GK       +++MV  G   + VTYG LI   C  G+   A+ L   M+
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            K  EP V+ Y  +I  L  + ++ EA ++F  M   G+ PN+ TYN+++ G CK ++  
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
                 +EM+   + PNVV F  L+D LCK G +  A +    M + GV P++  Y  L+
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM 326

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DGHC    + EA  +   M +   +P+V +Y+ LI G C + +++ A  L ++M +  ++
Sbjct: 327 DGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELV 386

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N+VTYN+LI G C  G +  A+++  +M   G  P++VT+  L+D  CK  ++D AM +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              +   +L PD+  +  +IDG+ + G ++    L+  +    + P V+T + +I+GL  
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCL 506

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G ++ A   F E    TDG  CSP+   Y  I +    + + L A +L  +M       
Sbjct: 507 QGLLAEATKLFREM--NTDG--CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSA 562

Query: 507 DNCTYTTMLRGL 518
           D  T T ++  L
Sbjct: 563 DASTITLIVEML 574



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 209/380 (55%), Gaps = 3/380 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    +   + EAL ++ ++    + P +   N++++GL K  ++  V    
Sbjct: 213 NVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLM 272

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV   ++ +VV +  L+D  C +G V  A ++ D MI +G+EP VV YT L+ G C  
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++M EA+ +F +M   G  PN+ +Y+ L++GYCK+  +++A+  + EM    L PN+VT+
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC VG LR A   F  M   G  P++  Y  L+D  CK  +L +AM++   +E 
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD+ +YNI+I G+C VG+LE A  L   +  +G+  +V TY  +I+G C +G + +
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M   G  P+  T++ +  G  +     +A+ L  EM+ +    D    T +++
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 408 GLSKDGNMKETLRLYKEMLE 427
            LS DG  +   ++  E ++
Sbjct: 573 MLSDDGLDQSVKQILHEFVQ 592



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 186/385 (48%), Gaps = 4/385 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N N + EA S F  M      P++  +  ++     +   +  L    +M    +  +V 
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  ++++  C +  +    +    + K G  P+   +  LI G C  G + EA+ L  +M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P+  TY  LI GLC VG    A  LL+ M ++    NV+TYN++ID   K+  +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL++ S+M  KG+ PNV T++S+I G CK         L  EMV   ++P+VV+FT L
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D L K+G +     +   M++  + P V T ++L+ G      +  A   F     K  
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG- 349

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C+PN + Y+ +I   C   +I KA  LF +M    L P+  TY T++ GL    R+ 
Sbjct: 350 ---CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406

Query: 526 DVMMLLADMIKMGIVPDAVINQVMV 550
           D + L  +M+  G +PD V  ++++
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILL 431


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 198/703 (28%), Positives = 323/703 (45%), Gaps = 145/703 (20%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLI 59
           + ++L+ A++Y   R  + +    L+   K ++    V+N L    E  KF+P+VF  ++
Sbjct: 100 LVHILSRARMYDETRSYLNE----LVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMIL 155

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGK-------FDSV------ 103
             + E G I+ AL V+    K+  +P++++CN LL+ L++KG+       +D +      
Sbjct: 156 KIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIV 215

Query: 104 -----------------W-----EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
                            W     +F +EM   G   +VVTY  LID C   GD+ +A  +
Sbjct: 216 PDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMV 275

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYC 200
              M ++GI    V  T+LI G C + K+ EAE + R M R  G+V + Y Y  L+DGYC
Sbjct: 276 LKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYC 335

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +V  ++ A+    EML+  L+ N+     L++G CK G++  A    + M  + + P  +
Sbjct: 336 RVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESY 395

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ L+DG C+ G + +A+S+ +EM +  I  +V T+N L+KGLC VG  E A  +   M
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM 455

Query: 321 YKEGILANVVTY-----------------------------------NSLIDGYCKEGDM 345
            K G+  + V+Y                                   N++I+G+CK   M
Sbjct: 456 LKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKM 515

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA---------------------- 383
            +A    ++M E G EP+ VT+ +LIDG CK GN++ A                      
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSL 575

Query: 384 -------------MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
                        M L +EM +K L P+VV +  LI G   +G + +    Y +M+E   
Sbjct: 576 IGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635

Query: 431 TPSVFTVSSLIHGLFKNGRISNA---------LNFFL-----EKTDKTDGG--------- 467
            P+V   S ++  L++ GRI  A         L+ FL     ++  K D G         
Sbjct: 636 APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIAD 695

Query: 468 --------YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                   +  PN V+Y   I  LC  G++  A K+FS +      PDN TY T++ G  
Sbjct: 696 TLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYS 755

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A  + D   L  +M+K G+ P+ +    ++ G  ++G+L  A
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRA 798



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 248/520 (47%), Gaps = 39/520 (7%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           CNAL+NG  K G+          MV   L  +  +Y  L+D  C +G V KA+++++EM+
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             GI+  VV +  L+ GLC      +A  ++  M + GV P+  +Y  L+D   K+ +  
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFF 481

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           RAL  ++++L      +   F  +++G CK+ ++  A   F  M + G  P+   Y  LI
Sbjct: 482 RALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLI 541

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG+CK GN+ EA  +  +MEK  I P +  YN LI GL    +      LL +M  +G+ 
Sbjct: 542 DGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLS 601

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            NVVTY +LI G+C EG ++KA +    M EKG  PNV+  S ++    + G ID A  L
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661

Query: 387 YTEMV----------------------------------IKSL-VPDVVVFTALIDGLSK 411
             +MV                                   KS  +P+ VV+   I GL K
Sbjct: 662 LQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCK 721

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + +  +++  +L    +P  FT  +LIHG    G +++A +   E   +      +P
Sbjct: 722 SGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG----LAP 777

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + Y A+I  LC  G + +A KLF  +    L P+  +Y  ++ G  +     + + L 
Sbjct: 778 NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLR 837

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M+K GI P  +    ++ G+ + GD+  A    + ++E
Sbjct: 838 NKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 262/557 (47%), Gaps = 88/557 (15%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +STL+  F   G + +A+ VY    ++ +   +   N+LL GL + G F+     +  M+
Sbjct: 397 YSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLML 456

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D V+Y  L+D     G+  +AL L+++++ +G   +   +  +I+G C   KM+
Sbjct: 457 KRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMI 516

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA---------------LEFYH--- 213
           EAE  F  M+E G  P+  TY  L+DGYCK+ +V  A               +E Y+   
Sbjct: 517 EAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLI 576

Query: 214 -----------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
                            EM    L PNVVT+G L+ G C  G L  A   +  M + G  
Sbjct: 577 GGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFA 636

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS------------------------- 291
           PN+ + + ++    + G + EA  L  +M   ++                          
Sbjct: 637 PNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADT 696

Query: 292 ----------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
                     P+   YNI I GLC  G+++ A+ +   +   G   +  TY +LI GY  
Sbjct: 697 LDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSA 756

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G++  A S+  +M ++G+ PN++T+++LI+G CK+GN+D A  L+ ++ +K L P+V+ 
Sbjct: 757 AGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVIS 816

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  LIDG  K+GN +E L L  +ML+  I+PS+ T S+LI+G  K G +  A N      
Sbjct: 817 YNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLL---- 872

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+    +   N   +  +++     G++ K +KL + M            T    G++  
Sbjct: 873 DEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMH----------ITIPCAGVISH 922

Query: 522 KRM-LDVMMLLADMIKM 537
           K+M LDV     +M+K+
Sbjct: 923 KQMELDVFSNAKEMLKL 939



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 213/392 (54%), Gaps = 9/392 (2%)

Query: 41  ALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLI 95
             N ++   F P    + TLI  + ++G++EEA  V  K+E   +LP+I+  N+L+ GL 
Sbjct: 521 TFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLF 580

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K  K   V +   EM L GL  +VVTYG LI   C +G + KA   + +MI+KG  P V+
Sbjct: 581 KSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVI 640

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           I + ++  L    ++ EA  + + M    V  +   ++ L        D  +  +   E 
Sbjct: 641 ICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDES 700

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                 PN V + + + GLCK G++  A   F  +   G  P+ F Y  LI G+  AGN+
Sbjct: 701 SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNV 760

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A SL  EM K  ++P++ TYN LI GLC  G L+ A+ L  K++ +G+  NV++YN L
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDGYCK G+  +AL + ++M ++G+ P+++T+S+LI G CK G++  A  L  EM  + L
Sbjct: 821 IDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM--REL 878

Query: 396 VPD--VVVFTALIDGLSKDGNMKETLRLYKEM 425
             D  +  F  L++G  K G +K+  +L+  M
Sbjct: 879 FADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 224/442 (50%), Gaps = 11/442 (2%)

Query: 138 ALNLFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           +L +++E++    D    PTV  + +++   C +  +  A  +F +M + G VP+L + N
Sbjct: 130 SLVVWNELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCN 187

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L+    +  + + A+  Y  +    + P+V T  ++++  CK G +  A +F   M   
Sbjct: 188 RLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYL 247

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G   N+  YN LIDG    G++  A  +   M +  I  +  T  +LIKG C   +LE A
Sbjct: 248 GFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA 307

Query: 314 EGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           E +L++M + EG++ +   Y  LIDGYC+   M+ A+ +  +M   G+  N+   ++LI+
Sbjct: 308 EKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALIN 367

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G +  A  L   MV   L P+   ++ L+DG  ++G + + + +Y EML   I  
Sbjct: 368 GYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQS 427

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +V T +SL+ GL + G   +AL+ +     +      +P+ V Y  ++  L   G+  +A
Sbjct: 428 NVVTHNSLLKGLCRVGAFEDALHVWHLMLKRG----VTPDEVSYCTLLDLLFKMGEFFRA 483

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L++D+ +         + TM+ G  + ++M++       M ++G  PD V  + ++ G
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
           Y + G+++ AF+  E +++  I
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAI 565



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 9/336 (2%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY-RKIE-- 79
           L KS+K   V     + L+ + +   +P+V  + TLI  + + G +++A   Y   IE  
Sbjct: 579 LFKSKKTREV----MDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P +  C+ +++ L + G+ D      ++MV   +  D   +  L     G  D  K  
Sbjct: 635 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIA 694

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +  DE       P  V+Y I I GLC   K+ +A+ +F S+   G  P+ +TY  L+ GY
Sbjct: 695 DTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGY 754

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
               +VN A     EML   L PN++T+  L++GLCK G L  A   F  +   G+ PN+
Sbjct: 755 SAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNV 814

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LIDG+CK GN  EA+ L ++M K  ISP + TY+ LI G C  G +  A  LL +
Sbjct: 815 ISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDE 874

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           M +     N+  +  L++G+ K G+++K   + + M
Sbjct: 875 MRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 266/536 (49%), Gaps = 9/536 (1%)

Query: 31  PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQAC 87
           P  V  S+  AL+  +    +P+V   L+  + + G +++A  V    R   + P+I+ C
Sbjct: 155 PPVVLASIHRALS--DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCC 212

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NALL  L++      +W+  E MV  G+  DV TY  LI+  C   +   A  +  EM +
Sbjct: 213 NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 272

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G     V Y +LI GLC    + EA    + M + G+VP+ +TY AL++G CK    N 
Sbjct: 273 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 332

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     EM    L+PNVV +  L+DG  + G    A      M   GV PN   Y+ L+ 
Sbjct: 333 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 392

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G +  A  L  +M +    PD  TYN++I+G       + A  LL +M   GI  
Sbjct: 393 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISP 452

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV TY+ +I G C+ G+ EKA  +  +MT KG++PN   ++ LI G C+ GN+  A  ++
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 512

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M   +++PD+  + +LI GLSK G ++E+ + + +M E  + P+ FT S LIHG  KN
Sbjct: 513 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 572

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G + +A        D        PN V+Y  ++++      I K S  F  M    +  D
Sbjct: 573 GDLESAEQLVQRMLDTG----LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 628

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           N  Y  ++  L  +  M     +L+ + K G VPD  +   ++ G  +  D + AF
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 254/517 (49%), Gaps = 7/517 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI      G +EEA    + +E   ++P      AL+NGL K  + +     
Sbjct: 277 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 336

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM    L  +VV Y  LID    +G+  +A  +  EM+  G++P  + Y  L+ GLC 
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +M  A  + + M      P+  TYN +++G+ +      A     EM +  + PNV T
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++ GLC+ GE   A +    M   G+ PN FVY  LI G+C+ GN+  A  +  +M 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K  + PD++ YN LI GL  VG++E +     +M + G+L N  TY+ LI GY K GD+E
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M + G++PN V +  L++   K+ +I+     +  M+ + ++ D  ++  LI
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             LS  GNM+   R+   + +    P V   SSLI GL K      A     E + K   
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG-- 694

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN V Y A+I  LC  G I  A  +F+ + +  L P+  TYT+++ G  +   + +
Sbjct: 695 --VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISN 752

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              L  +M+  GI PDA +  V+  G    GDL+ A 
Sbjct: 753 AFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 174/596 (29%), Positives = 276/596 (46%), Gaps = 65/596 (10%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVL 81
           L KSR+ +    ++ + ++  E+ K N  V++ LI  F   G+ +EA  + +++    V 
Sbjct: 324 LCKSRRSNEA-KALLDEMSCAEL-KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     + L+ GL K G+ D      ++MV      D +TY ++I+          A  L
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 441

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM + GI P V  Y+I+IHGLC   +  +A  +   M   G+ PN + Y  L+ GYC+
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V+ A E + +M   N+ P++  +  L+ GL KVG +  +  +F  M + G+ PN F 
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISP----------------------------- 292
           Y+ LI G+ K G+L  A  L   M    + P                             
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621

Query: 293 ------DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D   Y ILI  L   G +E A  +L  + K G + +V  Y+SLI G CK  D E
Sbjct: 622 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 681

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  +  +M++KGV+PN+V +++LIDG CK+G+I  A  ++  ++ K LVP+ V +T+LI
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 741

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K G++     LY EML   ITP  F  S L  G    G +  A+    E   +   
Sbjct: 742 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 801

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              S N+     ++   C  G++ +  KL   +    L P+  T   ++ GL  A ++ +
Sbjct: 802 SISSFNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 856

Query: 527 VMM-------------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           V                     L  DMI  G +P  V++  M+R + + G+L  A 
Sbjct: 857 VHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKAL 911



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 231/510 (45%), Gaps = 83/510 (16%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   + +++GL + G+ +   +  EEM   GL  +   Y  LI   C +G+V  A 
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +FD+M    + P +  Y  LI GL    ++ E+   F  M+E G++PN +TY+ L+ GY
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D+  A +    ML   L+PN V +  L++   K  ++    + F  M   GV  + 
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI     +GN+  A  + S +EK    PDV  Y+ LI GLC     E A G+L +
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K+G+  N+V YN+LIDG CK GD+  A +V + +  KG+ PN VT++SLIDG CK G+
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 380 IDAAMGLYTEMVIKSLVPDVVV----------------------------------FTAL 405
           I  A  LY EM+   + PD  V                                  F  L
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 809

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTD 462
           +DG  K G M+ETL+L   ++   + P+  T+ ++I GL + G++S     F+E   KT 
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 869

Query: 463 KTDGGYCS------------PNHVL----------------------------------Y 476
           ++   + S            P  V+                                  Y
Sbjct: 870 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 929

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            AI+  LC  G++ +A  L  +M    + P
Sbjct: 930 LAIVDNLCRKGKLSEALNLLKEMDKRGICP 959



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 225/476 (47%), Gaps = 61/476 (12%)

Query: 55   FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            +++LI   S++G +EE+   + +++   +LP     + L++G +K G  +S  +  + M+
Sbjct: 527  YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 112  LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              GL  + V Y  L++      D+ K  + F  M+D+G+     IY ILIH L +   M 
Sbjct: 587  DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
             A  +   + + G VP+++ Y++L+ G CK AD  +A     EM    + PN+V +  L+
Sbjct: 647  AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            DGLCK G++  A N F  +   G+ PN   Y  LIDG CK G++  A  L +EM    I+
Sbjct: 707  DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 766

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            PD F Y++L  G    G LE A  L+++M+  G  A++ ++N+L+DG+CK G M++ L +
Sbjct: 767  PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKL 825

Query: 352  CSQMTEKGVEPNVVTFSSLIDG-------------------------------------- 373
               +  +G+ PN +T  ++I G                                      
Sbjct: 826  LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 885

Query: 374  ---------------QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
                            CK GN+D A+ L   +V KS       + A++D L + G + E 
Sbjct: 886  QGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 945

Query: 419  LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS--NAL--NFFLEKTDKTDGGYCS 470
            L L KEM +  I PS      L+  L  +G I   N +  N    K  + D  +C+
Sbjct: 946  LNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDSKFCN 1001



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 6/274 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP V   ++L+      G+++ A  ++  M   G+  ++   N+L+    +   M     
Sbjct: 173 SPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWK 230

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+ P+V T+S+LI+  CK    D A  +  EM  +    + V +  LI GL 
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G ++E     K+M +  + P  FT  +LI+GL K+ R + A        D+       
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL----DEMSCAELK 346

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V+YA +I     +G   +A K+  +M +  ++P+  TY  ++RGL +  +M    +L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M++    PD +   +++ G+  +   K AFR
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 440



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 24/274 (8%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD F +  L   LC       A GLL KM +      VV              + +ALS
Sbjct: 121 APDAFAH--LAMSLCAGSLFNLANGLLIKMIRAYPSPPVVL-----------ASIHRALS 167

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                +     P V+    L+D   K+G +  A  +   M  + + P +    AL+  L 
Sbjct: 168 DSGHRS-----PAVLDV--LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL 220

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   M    ++ + M+ A I+P V+T S+LI    K      A    +E  ++     C 
Sbjct: 221 RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG----CG 276

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N V Y  +I  LC  G + +A     DM    L PD  TY  ++ GL +++R  +   L
Sbjct: 277 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 336

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L +M    + P+ V+   ++ G+   G+   AF+
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 370


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 262/500 (52%), Gaps = 7/500 (1%)

Query: 68  IEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I++AL ++ ++  +   P+I   + LL  + +   + +V   Y++M   G+  +  T  +
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+  C    +  A ++  +++  G +P+   +T LI GLC E K+ EA  +F  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             P++ TY  L++G CKV + + A+ F   M   N +P VV +  ++D LCK  +L  A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           + F  M   G+ PN F Y+ LI G C  G+  EA+ L   M   +I PD  T+N L+  L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A  ++  M +  +  +VVTYNSL+DG+C   +M K ++V   M  KG  P+V
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           +++++LI+G CK   +D AMGL+ EM  + L+PD V +  LI GL   G +++ + L+ E
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M+     P + T   L   L KN R++ A+          +G    P+  +Y+ ++  +C
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL----KVIEGTNLDPDIHIYSIVMDGMC 450

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A  LFS + S  L PD  TYT M+ GL +   + +   L  +M + G  P+A 
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNAC 510

Query: 545 INQVMVRGYQENGDLKSAFR 564
              ++ RG+  N +   A +
Sbjct: 511 TYNLITRGFLRNNETLRAIQ 530



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 262/526 (49%), Gaps = 12/526 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S+FN +  +  P   PS+  FS L+ + + M H    L +Y++++   +       N L+
Sbjct: 40  SLFNRMLRMRPP---PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G      T+  LI   C +G + +AL LFD+M  +G +
Sbjct: 97  NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P V+ Y  LI+GLC       A    RSM +    P +  Y+ ++D  CK   +  AL  
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL 216

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + +ML   + PN  T+  L+ GLC +G  + A   F  M    + P+   +N L+D  CK
Sbjct: 217 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 276

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + +A  +   M + ++ PDV TYN L+ G C   ++     +   M ++G + +V++
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y +LI+GYCK   M+KA+ +  +M+++G+ P+ VT+++LI G C  G +  A+ L+ EMV
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           +   +PD+V +  L D L K+  + E + L K +    + P +   S ++ G+ + G + 
Sbjct: 397 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE 456

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F + + K       P+   Y  +I  LC  G + +ASKLF +M  +   P+ CTY
Sbjct: 457 AARDLFSKLSSKG----LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             + RG LR    L  + L  +M+  G   D     ++V    ++G
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 190/397 (47%), Gaps = 4/397 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N N + +A S+F  M      P++  ++ L+    ++   +  L  Y +M    +  N  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  +L++  C +  L  A +    + K G  P+   +  LI G C  G + EA+ L  +M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 PDV TY  LI GLC VG    A   L+ M +      VV Y+++ID  CK+  +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +ALS+ S M  KG+ PN  T+SSLI G C  G+   A+ L+  M+ + ++PD + F  L
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D L K+G + +   +   M+++ + P V T +SL+ G      +   +N F     K  
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG- 329

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C P+ + Y  +I   C    + KA  LF +M    L PD  TY T++ GL    R+ 
Sbjct: 330 ---CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           D + L  +M+  G +PD V  +++     +N  L  A
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 423



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 123/255 (48%)

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           SEMG          +   +P++ +   L+NG  K    D     +EEM   GL+ D VTY
Sbjct: 313 SEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTY 372

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             LI   C  G +  A+ LF EM+  G  P +V Y IL   LC  +++ EA  + + +  
Sbjct: 373 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 432

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
             + P+++ Y+ +MDG C+  ++  A + + ++    L P+V T+ ++++GLC+ G L  
Sbjct: 433 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 492

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M + G  PN   YN +  G  +      A+ L  EM     S DV T  +L++
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 303 GLCGVGQLEGAEGLL 317
            L   G  +  + +L
Sbjct: 553 MLSDDGLDQSVKQIL 567


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 173/519 (33%), Positives = 265/519 (51%), Gaps = 13/519 (2%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
            PS+  F+TLI   S+ G + EA  +  +I   ++ P +    +L+ G  +    D  + 
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ MV  G   + VTY  LI+  C +G V +AL++ +EMI+KGIEPTV  YT+ I  LC
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 EA  +   M++ G  PN+ TY AL+ G  ++  +  A+  YH+ML   L PN V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++ LC  G    A   F  M   G   N   YN +I G C  G++ +AM L  +M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    P V TYN LI G    G +  A  LL  M + G   +  TYN L+ G+ K G +
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A     +M E G+ PN V++++LIDG  K G +D A+ L   M      P+V  + A+
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+GLSK+    E  ++  +M+E  + P+V T ++LI GL +NGR   A   F +   +  
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK- 613

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C PN   Y+++I  LC +G+  +A +    M      P   TY+T++ GL R  R  
Sbjct: 614 ---CLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFY 666

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +   L+ DM + G  PD  I   ++  + +N ++  A +
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 237/485 (48%), Gaps = 4/485 (0%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           ++ +CN LL  L K    +     Y++M+  G+   ++T+  LI+    +G V +A  + 
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
            ++    + P V  YT LI G C    +  A  +F  M + G  PN  TY+ L++G C  
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V+ AL+   EM+   ++P V T+ + +  LC +     A      M K G  PN+  Y
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             LI G  + G L  A+ L  +M K  + P+  TYN LI  LC  G+   A  +   M  
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G LAN  TYN +I G C  GD+EKA+ +  +M + G  P VVT+++LI+G    GN++ 
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L   M      PD   +  L+ G SK G ++     ++EM+E  + P+  + ++LI 
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  K+G++  AL+  L++ ++     C+PN   Y A+I  L  + +  +A K+   M   
Sbjct: 522 GHSKDGKVDIALSL-LKRMEEMG---CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L P+  TYTT++ GL R  R      +  DM K   +P+      ++ G  + G    A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 563 FRCSE 567
            R SE
Sbjct: 638 ERMSE 642



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 206/434 (47%), Gaps = 34/434 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI   S +G +E A+ +Y K+    ++P     NAL+N L   G+F +  + +
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G +A+  TY  +I   C  GD+ KA+ LF++M+  G  PTVV Y  LI+G   +
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +   M+E G  P+ +TYN L+ G+ K   +  A  ++ EM+   L PN V++
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  K G++  A +    M + G  PN+  YN +I+G  K     EA  +C +M +
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI----------- 336
             + P+V TY  LI GLC  G+ + A  +   M K   L N+ TY+SLI           
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 337 --------------------DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
                                G C++G   +A  +   M E+G  P+   + SL+   CK
Sbjct: 637 AERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 696

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A+ ++  +  K     + ++ ALI  L K G ++E   L+  MLE +       
Sbjct: 697 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 756

Query: 437 VSSLIHGLFKNGRI 450
            + L+ GL K G +
Sbjct: 757 WTVLVDGLLKEGEL 770



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 201/402 (50%), Gaps = 7/402 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G IE+A+ ++ K+     LP +   N L+NG + KG  ++     
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G   D  TY  L+      G +  A   F EM++ G+ P  V YT LI G   +
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  A S+ + M E G  PN+ +YNA+++G  K    + A +   +M+   L PNV+T+
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLC+ G  + A   F  M K    PN++ Y+ LI G C+ G   EA      M +
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSE 642

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P + TY+ L+ GLC  G+   AE L++ M + G   +   Y SL+  +CK  +++ 
Sbjct: 643 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 702

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +   +  KG + ++  + +LI   CKAG ++ A  L+  M+ K    D +V+T L+D
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           GL K+G +   ++L   M     TP++ T   L   L + G+
Sbjct: 763 GLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 220/478 (46%), Gaps = 43/478 (8%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           ++I  C  + ++ +  +  +E+   G   ++     L+  L     +  A ++++ M   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ P+L T+N L++   K   V  A     ++  ++L P+V T+  L+ G C+   L  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  M K G  PN   Y+ LI+G C  G + EA+ +  EM +  I P V+TY + I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC +   E A  L+ +M K G   NV TY +LI G  + G +E A+ +  +M ++G+ PN
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 364 VVTFSSLID-----------------------------------GQCKAGNIDAAMGLYT 388
            VT+++LI+                                   G C  G+I+ AM L+ 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M+    +P VV +  LI+G    GN+    RL   M E    P  +T + L+ G  K G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 449 RISNALNFFLEKTDKTDGGYC--SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           ++ +A  +F E  +      C  +PN V Y A+I     DG++  A  L   M      P
Sbjct: 493 KLESASFYFQEMVE------CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +  +Y  ++ GL +  R  +   +   M++ G++P+ +    ++ G   NG  + AF+
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D+   P   I  ++I    NE ++         +   G   +LY+ N L+    K   V 
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   Y +ML+  +QP+++TF  L++ L K G++R A      + ++ + P++F Y  LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            GHC+  NL  A  +   M K    P+  TY+ LI GLC  G+++ A  +L++M ++GI 
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V TY   I   C     E+A+ + ++M ++G  PNV T+++LI G  + G ++ A+GL
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y +M+ + LVP+ V + ALI+ L   G     L+++  M       +  T + +I GL  
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G I  A+  F EK  K       P  V Y  +I      G +  A++L   M+ +   P
Sbjct: 421 GGDIEKAMVLF-EKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  TY  ++ G  +  ++        +M++ G+ P+ V    ++ G+ ++G +  A    
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536

Query: 567 EFLKE 571
           + ++E
Sbjct: 537 KRMEE 541



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 186/372 (50%), Gaps = 9/372 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++TLI  +   G++  A   L + ++    P     N L++G  K GK +S   +
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++EMV CGL  + V+Y  LID     G V  AL+L   M + G  P V  Y  +I+GL  
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           EN+  EAE +   M E G++PN+ TY  L+DG C+      A + +H+M      PN+ T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ GLC+ G+   A      M++ G  P +  Y+ L+ G C+ G  +EA  L  +M+
Sbjct: 621 YSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    PD   Y  L+   C   +++ A  +   +  +G   ++  Y +LI   CK G +E
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A ++   M EK    + + ++ L+DG  K G +D  M L   M  K+  P++  +  L 
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 796

Query: 407 DGLSKDGNMKET 418
             LS+ G   E+
Sbjct: 797 RELSRIGKSIES 808



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 229 VLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           +LM   C+   E+R   +F   ++  G   +++  N L+    K   +  A +L  +M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P + T+N LI  L   G++  AE +L ++++  +  +V TY SLI G+C+  +++ 
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  V  +M ++G +PN VT+S+LI+G C  G +D A+ +  EM+ K + P V  +T  I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L    + +E + L   M +    P+V T ++LI GL + G++  A+  + +   +    
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG--- 368

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y A+I  LC  G+   A K+F  M       +  TY  +++GL     +   
Sbjct: 369 -LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           M+L   M+KMG +P  V    ++ GY   G++ +A R  + +KE+
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 34/304 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           NP  ++ LI   S+ G ++ AL + +++E +   P +++ NA++NGL K+ +F    +  
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK------------------- 148
           ++MV  GL+ +V+TY  LID  C  G    A  +F +M  +                   
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 149 ------------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
                       G EPT+  Y+ L+ GLC + +  EAE + + M+E G  P+   Y +L+
Sbjct: 632 GKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
             +CK  +V+ AL+ +H +     Q ++  +  L+  LCK G++  A   F +M +    
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            +  V+  L+DG  K G L   M L   ME    +P++ TY IL + L  +G+   +E L
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811

Query: 317 LQKM 320
             K+
Sbjct: 812 ADKL 815


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 162/467 (34%), Positives = 253/467 (54%), Gaps = 13/467 (2%)

Query: 38  VFNALNSLE---IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           VF+ L S     +P F   VF  L     ++G +EEA+  + K++   V P  ++CN LL
Sbjct: 10  VFDVLWSTRNVCVPGF--GVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLL 67

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +   K GK D V  F+++M+  G    V TY ++IDC C +GDV  A  LF+EM  +G+ 
Sbjct: 68  HKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLI 127

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y  +I G     ++ +    F  M++    P++ TYNAL++ +CK   + + LEF
Sbjct: 128 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM  + L+PNVV++  L+D  CK G ++ A  F+V M + G+ PN + Y  LID +CK
Sbjct: 188 FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            GNL +A  L +EM +  +  +V TY  LI GLCG         LL +M +  I   VVT
Sbjct: 248 IGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVT 307

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +  LIDG CK   + KA+    +++   G++ N   ++++IDG CK   ++AA  L+ +M
Sbjct: 308 FCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQM 367

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K LVPD   +T+L+DG  K GN+ E L L  +M+E  +   +   +SL+ GL    ++
Sbjct: 368 AQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQL 427

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
             A +F  E      G    P+ VL  ++++     G I +A +L S
Sbjct: 428 QKARSFLEEMI----GEGIHPDEVLCISVLKKHYELGCINEAVELQS 470



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/420 (32%), Positives = 212/420 (50%), Gaps = 6/420 (1%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   ++  L   L +   + EA   F  M+   V P   + N L+  + K+   +    F
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + +M+    +P V T+ +++D +CK G++ AA   F  M   G+ P+   YN +IDG  K
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L + +    EM+     PDV TYN LI   C  G+L       ++M + G+  NVV+
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++L+D +CKEG M++A+     M   G+ PN  T++SLID  CK GN+  A  L  EM+
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              +  +VV +TALIDGL    N  E L L  EM+E  I  +V T   LI GL KN  +S
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A+++F   ++  D G    N  +Y A+I  LC   Q+  A+ LF  M    L PD   Y
Sbjct: 323 KAIDYFGRISN--DFGL-QANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           T+++ G  +   +L+ + L   M++ G+  D +    +V G      L+ A     FL+E
Sbjct: 380 TSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA---RSFLEE 436


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/523 (31%), Positives = 260/523 (49%), Gaps = 14/523 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI  F +    ++A  +  ++E   ++P     N ++ GL   G+ DS    Y +M
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 228

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                   V+TY +L+D  C    +  A  + ++MI+ G  P VV Y  LI+G C    M
Sbjct: 229 QR-NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F  M E    P+++TYN L+DGYCK        +   EM+ +  +PN +T+  L
Sbjct: 288 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           MD L K G+   A N    M +    P+ F +N +ID  CK G L  A  L   M     
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD++TYNI+I G C   +++ A  LL++M + G   +VVTYNS++ G CK   +++A  
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   +   G   +VVT S+LIDG CK+  +D A  L  EM      PDVV +T LI G  
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGG 467
           K   + ++L  + EML+    P+V T S +I  L K+ R+ +    L   LE+       
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG------ 581

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             +P+ ++Y ++I  LC      +A +L+  M+     P   TY  ++  L +  R+ + 
Sbjct: 582 -VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + LL  M   G +PD V    +  G+ ++ +   AFR  + +K
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/542 (30%), Positives = 264/542 (48%), Gaps = 16/542 (2%)

Query: 10  LYKNARCLI---KDVTENLL-----KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           L+KN RC +     +T + L     K+R      Y + + +    I   N +V++T+I  
Sbjct: 154 LFKNHRCGLCSPDSITYSTLINGFCKARDFQQA-YRLLDEMEKRGIVPHN-AVYNTIIKG 211

Query: 62  FSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
             + G ++ AL  YR ++    P++     L++ L K  +        E+M+  G   +V
Sbjct: 212 LCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNV 271

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           VTY  LI+  C  G++ +A+ LF++M++    P V  Y ILI G C + +  +   + + 
Sbjct: 272 VTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 331

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M + G  PN  TYN LMD   K      A      ML  + +P+  TF +++D  CKVG+
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F  M   G  P+I+ YN +I G C+A  + +A  L   M +    PDV TYN 
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++ GLC   Q++ A  + + +   G   +VVT ++LIDG CK   ++ A  +  +M   G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+VV ++ LI G CKA  +D ++  ++EM+ K  VP V+ ++ +ID L K   +++  
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L K MLE  +TP     +S+I GL K+     A   +  K  K  G  C+P  V Y  +
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY--KLMKQTG--CAPTVVTYNVL 627

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC   ++ +A  L   M SD   PD  TY ++  G  ++        L   M   G 
Sbjct: 628 VDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGC 687

Query: 540 VP 541
            P
Sbjct: 688 SP 689



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 247/489 (50%), Gaps = 9/489 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDE 144
            CN LL+  ++K K    ++ ++    CGL + D +TY  LI+  C   D  +A  L DE
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNH-RCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVA 203
           M  +GI P   +Y  +I GLC+  ++  A   +R M R C   P++ TY  L+D  CK A
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCA--PSVITYTILVDALCKSA 250

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            ++ A     +M+     PNVVT+  L++G CK+G +  A   F  M +    P++F YN
Sbjct: 251 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 310

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LIDG+CK     +   L  EM K+   P+  TYN L+  L   G+   A  L Q M + 
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
               +  T+N +ID +CK G ++ A  +   MT++G  P++ T++ +I G C+A  ID A
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L   M      PDVV + +++ GL K   + E   +Y+ +        V T S+LI G
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K+ R+ +A     E   + +G   +P+ V Y  +I   C   Q+ K+   FS+M    
Sbjct: 491 LCKSRRLDDAEKLLREM--ERNGS--APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             P   TY+ ++  L ++ R+ D  MLL  M++ G+ PDA++   ++ G  ++     A+
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606

Query: 564 RCSEFLKES 572
              + +K++
Sbjct: 607 ELYKLMKQT 615



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 184/372 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++ L+K GK+   +   + M+         T+ ++ID  C  G +  A  LF  M D
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 404

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  P +  Y I+I G C  N++ +A  +   M E G  P++ TYN+++ G CK + V+ 
Sbjct: 405 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 464

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A E Y  + +     +VVT   L+DGLCK   L  A      M + G  P++  Y  LI 
Sbjct: 465 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 524

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKA  L ++++  SEM      P V TY+I+I  LC   ++     LL+ M + G+  
Sbjct: 525 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTP 584

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + + Y S+IDG CK    ++A  +   M + G  P VVT++ L+D  CK   +D A+ L 
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLL 644

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M     +PD V + ++ DG  K     +  RL++ M     +P+ F  S L+  L   
Sbjct: 645 EVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAE 704

Query: 448 GRISNALNFFLE 459
            ++  A+  + E
Sbjct: 705 EKMDQAMEIWEE 716



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 3/339 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ +I  F ++G ++ A  +++ +     LP I   N +++G  +  + D   +  E M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   DVVTY  ++   C    V +A  +++ + + G    VV  + LI GLC   ++
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE + R M   G  P++  Y  L+ G+CK   ++++L F+ EML     P V+T+ ++
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK   +R        M + GV P+  VY  +IDG CK+ +  EA  L   M++   
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P V TYN+L+  LC V +L+ A  LL+ M  +G L + VTYNS+ DG+ K  + +KA  
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR 677

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +   M  +G  P    +S L+        +D AM ++ E
Sbjct: 678 LFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 188/396 (47%), Gaps = 34/396 (8%)

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           +T N L+  + +      A + +         P+ +T+  L++G CK  + + A      
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M K G+ P+  VYN +I G C  G +  A+    +M++   +P V TY IL+  LC   +
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSAR 251

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A  +L+ M + G   NVVTYN+LI+G+CK G+M++A+ + +QM E    P+V T++ 
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG CK         L  EMV     P+ + +  L+D L K G   +   L + ML   
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK-------------------------- 463
             PS FT + +I    K G++  A   F   TD+                          
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 464 ------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                 T+ G C P+ V Y +I+  LC   Q+ +A +++  +R+     D  T +T++ G
Sbjct: 432 QLLERMTEAG-CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           L +++R+ D   LL +M + G  PD V   +++ G+
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 170/341 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++   K G+ D  +E ++ M   G + D+ TY ++I   C    +  A  L + M +
Sbjct: 380 NLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE 439

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P VV Y  ++ GLC  +++ EA  ++  +R  G   ++ T + L+DG CK   ++ 
Sbjct: 440 AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDD 499

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +   EM  +   P+VV + +L+ G CK  +L  +  FF  M   G  P +  Y+ +ID
Sbjct: 500 AEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 559

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CK+  + +   L   M +  ++PD   Y  +I GLC     + A  L + M + G   
Sbjct: 560 KLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            VVTYN L+D  CK   +++A+ +   M   G  P+ VT++S+ DG  K+   D A  L+
Sbjct: 620 TVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLF 679

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
             M  +   P   +++ L+  L  +  M + + +++E LEA
Sbjct: 680 QAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEA 720



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 133/285 (46%), Gaps = 2/285 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N++++GL K  + D  +E YE +   G   DVVT   LID  C    +  A  L
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM   G  P VV YTILIHG C  +++ ++ + F  M + G VP + TY+ ++D  CK
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            A V         ML   + P+ + +  ++DGLCK      A   +  M + G  P +  
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+D  CK   L EA+ L   ME     PD  TYN +  G     + + A  L Q M 
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNV 364
             G       Y+ L+     E  M++A+ +  +  E G  V+P +
Sbjct: 684 SRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 65/138 (47%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P      ++++GL K   +D  +E Y+ M   G    VVTY VL+D  C    + +A+
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +L + M   G  P  V Y  +  G     +  +A  +F++M+  G  P  + Y+ L+   
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701

Query: 200 CKVADVNRALEFYHEMLH 217
                +++A+E + E L 
Sbjct: 702 VAEEKMDQAMEIWEEALE 719


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 273/563 (48%), Gaps = 28/563 (4%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYR-KIEVLPAIQACNALLNGL 94
           V    N +   +F+P V +  T++ A+ ++G ++ AL  +R K+   P       L++GL
Sbjct: 43  VLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGL 102

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            +  + D  ++  +EM+      D   Y  LI   C  G +  A N+   M+++   P V
Sbjct: 103 CQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDV 162

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           + YT LI G C  N + EA  +   M+E G+ P+   YNAL++G CK   +    +   E
Sbjct: 163 ITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEE 222

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+    +P+  ++  ++  LC+ G+   AG     M +    P++  YN L+DG CK   
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L  +M     +P V TY  LI G     +L  A  +++ M+K GI  ++VTYN 
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+DG CK G +E+A  +   M EK   P+VVT+S L++G CK G +D A  L   M+ + 
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             P++V F  +IDG  K G + E  ++ + M E   TP V T S+LI G  K  R+ +A 
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462

Query: 455 NFFLEKTDKTD-----GGYCS--------------------PNHVLYAAIIQALCYDGQI 489
                  DK        G CS                    P    YA II  LC   + 
Sbjct: 463 AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A K+   M      P+  TY+ ++ GL + KR+ D + +L  M++ G VPD      +
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582

Query: 550 VRGYQENGDLKSAFRCSEFLKES 572
           + G+ +   + +A++C + +++S
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDS 605



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 260/524 (49%), Gaps = 13/524 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + +V++ LI    +MG I+ A  V + +     +P +    +L+ G  +    D   +  
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M   GL  D V Y  L++  C Q  + +   L +EM++ G EP    Y  ++  LC  
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EA  +   M E    P++ TYN+LMDG+CKV+ ++ A     +M+     P V+T+
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G  +   L  A      M K G+ P++  YNCL+DG CKAG L EA  L   M +
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            + +PDV TY+IL+ GLC +G+++ A  LL+ M + G   N+VT+N++IDG+CK G +++
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
              V   M E    P+VVT+S+LIDG CKA  +  A        I  + PD   ++++++
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA------ILGISPDKASYSSMLE 479

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL   G ++E   +   M +    P+    + +I GL    R   AL      +++    
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG--- 536

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C PN   Y+ +I  LC   ++  A  +   M      PD  TYT+++ G  +  +M   
Sbjct: 537 -CEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAA 595

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
                 M   G  PD +   +++ G+ ++G+++ A    + + E
Sbjct: 596 YQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 246/504 (48%), Gaps = 20/504 (3%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+     AL+ G  + G    V E   EM+      DV+T+  ++   C  GD+ +AL+ 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F   +     PT   Y ILIHGLC   ++ EA  +   M +    P+   YN L+ G CK
Sbjct: 82  FRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +  ++ A      ML  +  P+V+T+  L+ G C+   L  A      M + G+ P+   
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L++G CK   L E   L  EM +    PD F+YN ++  LC  G+ E A  +L+KM 
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++    +VVTYNSL+DG+CK   M++A  +   M  +   P V+T+++LI G  +A  + 
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +  +M    + PD+V +  L+DGL K G ++E   L + M+E    P V T S L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 442 HGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +GL K G++ +A   L   LE+        C PN V +  +I   C  G++ +  K+   
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERG-------CQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M+  +  PD  TY+T++ G  +A RM D   +L      GI PD      M+ G    G 
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486

Query: 559 LKSAFRCSEFLKESRIGSSETEGH 582
           ++ A    + +  ++ G   T  H
Sbjct: 487 VEEAQEVMDLM--TKQGCPPTSSH 508



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 237/500 (47%), Gaps = 77/500 (15%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI+   +   ++EA  +  K++   + P   A NALLNGL K+ + + V +  EEM
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D  +Y  ++ C C  G   +A  + ++MI+K   P VV Y  L+ G C  +KM
Sbjct: 224 VEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKM 283

Query: 171 VEAESMFRSM--REC---------------------------------GVVPNLYTYNAL 195
            EAE +   M  R C                                 G+ P+L TYN L
Sbjct: 284 DEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCL 343

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG CK   +  A E    M+  +  P+VVT+ +L++GLCK+G++  A      M + G 
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI-------------- 301
            PN+  +N +IDG CKAG + E   +   M++   +PDV TY+ LI              
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463

Query: 302 ---------------KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                          +GLC  G++E A+ ++  M K+G       Y  +I G C     +
Sbjct: 464 ILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGD 523

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL +   M+E+G EPN+ T+S LI+G CK   ++ A+ +   M+ K  VPDV  +T+LI
Sbjct: 524 EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLI 583

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDK 463
           DG  K   M    + +K M ++   P     + LI G  ++G +  A   +   LEK   
Sbjct: 584 DGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG-- 641

Query: 464 TDGGYCSPNHVLYAAIIQAL 483
                C+P+   Y +++++L
Sbjct: 642 -----CNPDAATYFSLMRSL 656



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 212/436 (48%), Gaps = 37/436 (8%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           + +E  S FR        P+  TY AL+ G+ +  +    LE  +EML     P+V+T  
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 229 VLMDGLCKVGEL-RAAGNF---------------FVH-----------------MAKFGV 255
            ++   C++G+L RA  +F                +H                 M +   
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+  VYNCLI G CK G +  A ++   M +    PDV TY  LI G C    L+ A  
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L++KM + G+  + V YN+L++G CK+  +E+   +  +M E G EP+  ++++++   C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           ++G  + A  +  +M+ K   PDVV + +L+DG  K   M E  RL ++M+  +  P+V 
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI G  +  R+++A        D    G  SP+ V Y  ++  LC  G++ +A +L
Sbjct: 304 TYTTLIGGFSRADRLADAYRVM---EDMFKAGI-SPDLVTYNCLLDGLCKAGKLEEAHEL 359

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M   +  PD  TY+ ++ GL +  ++ D  +LL  M++ G  P+ V    M+ G+ +
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419

Query: 556 NGDLKSAFRCSEFLKE 571
            G +    +  E +KE
Sbjct: 420 AGKVDEGHKVLELMKE 435



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 186/366 (50%), Gaps = 11/366 (3%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++TLI  FS    + +A  V     K  + P +   N LL+GL K GK +   E 
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E MV      DVVTY +L++  C  G V  A  L + M+++G +P +V +  +I G C 
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ E   +   M+E    P++ TY+ L+DGYCK   +  A           + P+  +
Sbjct: 420 AGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKAS 473

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  +++GLC  G++  A      M K G  P    Y  +I G C      EA+ +   M 
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P+++TY+ILI GLC   ++E A  +L  M ++G + +V TY SLIDG+CK   M+
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMD 593

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A      M + G EP+ + ++ LI G C++GN++ A+ +   M+ K   PD   + +L+
Sbjct: 594 AAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653

Query: 407 DGLSKD 412
             L+ +
Sbjct: 654 RSLTTE 659



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 9/257 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+T+I  F + G ++E    L + +++   P +   + L++G  K  +    +   
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF--- 462

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
               + G+  D  +Y  +++  C  G V +A  + D M  +G  PT   Y ++I GLC+ 
Sbjct: 463 ---AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA  M + M E G  PNLYTY+ L++G CK   V  A+     ML     P+V T+
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK+ ++ AA   F  M   G  P+   YN LI G C++GN+ +A+ +   M +
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639

Query: 288 FEISPDVFTYNILIKGL 304
              +PD  TY  L++ L
Sbjct: 640 KGCNPDAATYFSLMRSL 656


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 240/435 (55%), Gaps = 4/435 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+ + P +   N LL+GL  K K     + ++EMV  G   DV+TY  +I+  C  G+  
Sbjct: 3   KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL L  +M +KG +P VV Y  +I  LC +  + EA   F  M + G+ P+++TY++++
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+C +  VN A   + +M+  N+ PN VTF +L+DGLCK   +  A   F  M + G+ 
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+++ YN L+DG+C    + EA  L + M++   +P+V +YNILI G C  G+++ A+GL
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L +M  + +  ++ TY++L+ G+C+ G  ++A  +  +M   G+ PN++T+S ++DG CK
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G++D A  L   M    + P++ ++T LI+G+   G ++    L+  +    I P+V T
Sbjct: 303 HGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            + +I GL K G  + A   F E     +G  C PN   Y  IIQ    +G    A +L 
Sbjct: 363 YTVMISGLLKGGLSNEACELFREMA--VNG--CLPNSCTYNVIIQGFLRNGDTPNAVRLI 418

Query: 497 SDMRSDNLRPDNCTY 511
            +M       D+ T+
Sbjct: 419 EEMVGKGFSADSSTF 433



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 230/413 (55%), Gaps = 3/413 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TL+        I +A+ ++ ++  +   P +   + ++NGL K G      +  ++M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +VV Y  +ID  C    V +A++ F EM+ +GI P V  Y+ ++HG CN  ++
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+F+ M E  V+PN  T+  L+DG CK   ++ A   +  M    L+P+V T+  L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C   ++  A   F  M + G  PN+  YN LI+GHCK+G + EA  L +EM    +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD+FTY+ L++G C VG+ + A+ LL++M   G+L N++TY+ ++DG CK G +++A  
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M E  +EPN+  ++ LI+G C  G ++AA  L++ + +K + P VV +T +I GL 
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           K G   E   L++EM      P+  T + +I G  +NG   NA+    E   K
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 232/430 (53%), Gaps = 4/430 (0%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL   +VT+  L+   C +  +M A+ LFDEM+  G EP V+ Y+ +I+GLC       A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + + M E G  PN+  YN ++D  CK   V  A++F+ EM+   + P+V T+  ++ G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C +G +  A + F  M +  V PN   +  LIDG CK   + EA  +   M +  + PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V+TYN L+ G C   Q++ A+ L   M ++G   NV +YN LI+G+CK G +++A  + +
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M+ K + P++ T+S+L+ G C+ G    A  L  EM    L+P+++ ++ ++DGL K G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E   L K M E+KI P++F  + LI G+   G++  A   F     K       P  
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG----IQPTV 360

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  +I  L   G   +A +LF +M  +   P++CTY  +++G LR     + + L+ +
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 534 MIKMGIVPDA 543
           M+  G   D+
Sbjct: 421 MVGKGFSADS 430



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 206/405 (50%), Gaps = 38/405 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +ST+I    +MG+   AL + +K+E     P + A N +++ L K        +F+ EM
Sbjct: 47  TYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM 106

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+  DV TY  ++   C  G V +A +LF +M+++ + P  V +TILI GLC +  +
Sbjct: 107 VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMI 166

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH----------------- 213
            EA  +F +M E G+ P++YTYNAL+DGYC  + ++ A + ++                 
Sbjct: 167 SEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNIL 226

Query: 214 ------------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                             EM H +L P++ T+  LM G C+VG  + A      M  +G+
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y+ ++DG CK G+L EA  L   M++ +I P++F Y ILI+G+C  G+LE A  
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L   ++ +GI   VVTY  +I G  K G   +A  +  +M   G  PN  T++ +I G  
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           + G+   A+ L  EMV K    D   F  L D  S D  + + +R
Sbjct: 407 RNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMR 451


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 255/485 (52%), Gaps = 10/485 (2%)

Query: 110 MVLCGLVADVVTYGVLIDCCC--GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           M L  +  DV T  +LI+C C         A ++   M   G++P  V ++ L++GL ++
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+++A  +F  M + G  P++ TY+ +++G CK+     A++   +M     +PNVV +
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++D LCK   +  A  F   M   G+ PN+  Y+ ++ G C  G   EA SL  +M +
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  T+NIL+ GL   G +  A+ + + M ++G+  NV TYN+L+DGYC +  M++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M  KG  P+V +++ LI G CK+G ID A GL  EM  K+L PD V ++ L+ 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  +DG  ++  +L +EM    + P + T S ++ GL K G +  A        +     
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK--- 357

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN  +Y  +IQ +C  G++  A +LFS++    ++PD  TYT M+ GLL+     + 
Sbjct: 358 -IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEA 416

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L  DM   G +P++    V+++G+  NGD  +A R    L E  +G   +   +T   
Sbjct: 417 CELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR----LIEEMVGRGFSADSSTFQM 472

Query: 588 LGHLK 592
           L  L+
Sbjct: 473 LSDLE 477



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 232/424 (54%), Gaps = 4/424 (0%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNA 89
           H  +SV   +  L +   N   FSTL+   S    I +A+ ++    K+   P +   + 
Sbjct: 29  HFAFSVLGNMFKLGLQP-NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYST 87

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++NGL K G      +  ++M   G   +VV Y  +ID  C    + +A+    EM+++G
Sbjct: 88  IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG 147

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I P VV Y+ ++HG CN  +  EA S+F+ M E  V+P+  T+N L+DG  K   +  A 
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             +  M+   ++PNV T+  LMDG C   ++  A   F  M + G  P++  YN LI GH
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK+G + EA  L +EM    ++PD  TY+ L+KG C  G+ + A+ LL++M   G+L ++
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TY+ ++DG CK+G +++A  +   M E  +EPN+  ++ LI G C  G ++AA  L++ 
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           + +K + PDVV +T +I GL K G   E   L+++M      P+  T + +I G  +NG 
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447

Query: 450 ISNA 453
            SNA
Sbjct: 448 TSNA 451



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 251/492 (51%), Gaps = 12/492 (2%)

Query: 45  LEIPKFNPSVFSTLII----AFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKK 97
           +++    P V++  I+      S   H   A  V     K+ + P     + LLNGL  K
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            K     + ++EMV  G   DV+TY  +I+  C  G    A+ L  +M +KG +P VV+Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I  LC +  + EA      M   G+ PN+ TY++++ G+C +   N A   + +M+ 
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            N+ P+ VTF +L+DGL K G +  A   F  M + GV PN+  YN L+DG+C    + E
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L + M +   +P V +YNILIKG C  G+++ A+GLL +M  + +  + VTY++L+ 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G+C++G  + A  +  +M   G+ P+++T+S ++DG CK G++D A  L   M    + P
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           ++ ++T LI G+   G ++    L+  +    I P V T + +I GL K G  + A   F
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
               D    G C PN   Y  IIQ    +G    A +L  +M       D+ T+  ML  
Sbjct: 421 ---RDMAVHG-CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF-QMLSD 475

Query: 518 LLRAKRMLDVMM 529
           L     ++ + M
Sbjct: 476 LESRDEIISLFM 487


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 262/526 (49%), Gaps = 24/526 (4%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +   N L+ G    G  +    F+ EM   G + +VVTY  +ID  C    + +A 
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M  KG+ P ++ Y ++I+GLC E +M E   +   M +   VP+  T+N L++GY
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C V + ++AL  + EM+ + L PNVVT+  L++ +CK G L  A  F   M   G+ PN 
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  LIDG  + G L +A  +  EM +   +P + TYN LI G C +G++E A GLLQ+
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G + +VV+Y+++I G+C+  ++EKA  +  +M  KG+ P+V T+SSLI G CK   
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +     L+ EM+   L PD V +T+LI+    +G++ + LRL+ EM++   +P + T + 
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA---------------AIIQALC 484
           LI+G  K  R   A    L+   +       PN + Y                A+++  C
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEES----VPNEITYNTLIDNCNNLEFKSALALMKGFC 614

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G + +A ++   M     + +   Y  ++ G  +   +     L  +M+  G  P +V
Sbjct: 615 MKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSV 674

Query: 545 INQVMVRG-YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
               + +  Y E  +++        LK  RI    TE    +  +G
Sbjct: 675 TIMALAKSLYHEGKEVELNQLLDYTLKSCRI----TEAALAKVLIG 716



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 234/451 (51%), Gaps = 6/451 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           G +  V++Y  ++D        +K A  +F EM++ G+ P V  Y ILI G C    +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
               F  M   G +PN+ TYN ++D YCK+  +  A +    M    L PN++++ V+++
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC+ G+++        M+K    P+   +N LI+G+C  GN  +A+ L +EM K  +SP
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TY  LI  +C  G L  A   L +M   G+  N  TY +LIDG+ ++G +++A  + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M E G  P ++T+++LI+G C  G ++ A GL  EM+ +  +PDVV ++ +I G  ++
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             +++  +L  EM+   I+P V T SSLI GL K  R+    + F E           P+
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG----LPPD 517

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y ++I A C +G + KA +L  +M      PD  TY  ++ G  +  R  +   LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++    VP+ +    ++     N + KSA 
Sbjct: 578 KLLYEESVPNEITYNTLIDNCN-NLEFKSAL 607



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 172/582 (29%), Positives = 283/582 (48%), Gaps = 29/582 (4%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLII 60
            ++L   KLYK A+ L ++V  N +           +F  L NS    K + +VF  ++ 
Sbjct: 86  LHILTRYKLYKTAQSLAEEVVVNTVDETGE-----DLFQCLKNSYYQCKSSSAVFDLVVK 140

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE-FYEEMVLCGLV 116
           + + +  I +AL +    +    +P + + NA+L+ +I+  +   + E  ++EMV  G+ 
Sbjct: 141 SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS 200

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY +LI   C  G++   L  F EM   G  P VV Y  +I   C   K+ EA  +
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            R M   G+ PNL +YN +++G C+   +    E   EM      P+ VTF  L++G C 
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           VG    A      M K G+ PN+  Y  LI+  CKAGNL  AM    +M    + P+  T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G    G L+ A  ++++M + G    ++TYN+LI+G+C  G ME A  +  +M 
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E+G  P+VV++S++I G C+   ++ A  L  EMV K + PDV  +++LI GL K   + 
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L++EML   + P   T +SLI+     G +  AL    E   K   G+ SP+ V Y
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK---GF-SPDIVTY 556

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT---------------MLRGLLRA 521
             +I       +  +A +L   +  +   P+  TY T               +++G    
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             M +   +L  M++ G   +  +  V++ G+ + G+++ A+
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 205/432 (47%), Gaps = 53/432 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI  +  +G+  +AL ++ ++    + P +     L+N + K G  +   EF ++M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +  TY  LID    QG + +A  +  EM++ G  PT++ Y  LI+G C   +M
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  + + M E G +P++ +Y+ ++ G+C+  ++ +A +   EM+   + P+V T+  L
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK   L    + F  M   G+ P+   Y  LI+ +C  G+L +A+ L  EM +   
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID------------- 337
           SPD+ TYN+LI G     + + A+ LL K+  E  + N +TYN+LID             
Sbjct: 550 SPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609

Query: 338 --GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
             G+C +G M +A  V   M +KG + N   ++ +I G  K GNI+ A  LY EM+    
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGF 669

Query: 396 VPDVVVFTALIDGL-----------------------------------SKDGNMKETLR 420
            P  V   AL   L                                   SK+GNM     
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFN 729

Query: 421 LYKEMLEAKITP 432
           + K+M  + + P
Sbjct: 730 VLKDMALSGLLP 741



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 154/365 (42%), Gaps = 53/365 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  FS+ G +++A  + +++      P I   NAL+NG    G+ +      
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  G + DVV+Y  +I   C   ++ KA  L  EM+ KGI P V  Y+ LI GLC +
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ E   +F+ M   G+ P+  TY +L++ YC   D+++AL  + EM+     P++VT+
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 228 GVL--------------------------------------------------MDGLCKV 237
            VL                                                  M G C  
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A      M + G   N  VYN +I GH K GN+ +A +L  EM     +P   T 
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L K L   G+      LL    K   +        LI    KEG+M+   +V   M  
Sbjct: 677 MALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMAL 736

Query: 358 KGVEP 362
            G+ P
Sbjct: 737 SGLLP 741


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 274/532 (51%), Gaps = 11/532 (2%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           V + LN +    F  S++S  TL+I  ++   +E A  +Y+++    + P++   N L+N
Sbjct: 189 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 248

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L KKGK         ++    L  DV TY  LI   C   ++  A  +FD M+ +G +P
Sbjct: 249 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 308

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V Y+ LI+GLCNE ++ EA  M   M E G+ P +YTY   +   C +     A+E  
Sbjct: 309 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M     +PNV T+  L+ GL ++G+L  A   +  M K G+ PN   YN LI+  C  
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 428

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G    A+ +   ME      +  TYN +IKGLC  G +E A  L +KM K G L  VVTY
Sbjct: 429 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 488

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI+GY  +G++  A  +   M E G EP+  T++ L+ G  K G +++A   + EMV 
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 548

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             L P+ V +T LIDG SKDG +   L L + M E    P+V + +++I+GL K  R S 
Sbjct: 549 CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSE 608

Query: 453 ALNFFLEKT-DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           A     EK  DK       PN + Y  +I  LC +G+   A K+F DM      P+  TY
Sbjct: 609 A-----EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 663

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++++ GL +  +  +  +LL +M + G+ PD V    ++ G+   G +  AF
Sbjct: 664 SSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 281/613 (45%), Gaps = 103/613 (16%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
            PS+  F+TLI   S+ G + EA  +  +I   ++ P +    +L+ G  +    D  + 
Sbjct: 237 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 296

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ MV  G   + VTY  LI+  C +G V +AL++ +EMI+KGIEPTV  YT+ I  LC
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 EA  +   M++ G  PN+ TY AL+ G  ++  +  A+  YH+ML   L PN V
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416

Query: 226 TFGVLMD-----------------------------------GLCKVGELRAAGNFFVHM 250
           T+  L++                                   GLC  G++  A   F  M
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G  P +  YN LI+G+   GN+  A  L   M++    PD +TYN L+ G    G+L
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS-------------------- 350
           E A    Q+M + G+  N V+Y +LIDG+ K+G ++ ALS                    
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 351 ---------------VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
                          +C +M E+G+ PNV+T+++LIDG C+ G    A  ++ +M  +  
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           +P++  +++LI GL ++G   E   L KEM    + P   T +SLI G    GRI +A  
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA-- 714

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK------------------------ 491
            FL      D G C PN+  Y+ +++ L  +  +L+                        
Sbjct: 715 -FLLLRRMVDVG-CKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            S L + M      P   TY+T++ GL R  R  +   L+ DM + G  PD  I   ++ 
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 832

Query: 552 GYQENGDLKSAFR 564
            + +N ++  A +
Sbjct: 833 AHCKNLEVDHALK 845



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 262/536 (48%), Gaps = 31/536 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI   S +G +E A+ +Y K+    ++P     NAL+N L   G+F +  + +
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G +A+  TY  +I   C  GD+ KA+ LF++M+  G  PTVV Y  LI+G   +
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +   M+E G  P+ +TYN L+ G+ K   +  A  ++ EM+   L PN V++
Sbjct: 499 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 558

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  K G++  A +    M + G  PN+  YN +I+G  K     EA  +C +M +
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P+V TY  LI GLC  G+ + A  +   M K   L N+ TY+SLI G C+EG  ++
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M  KG+ P+ VTF+SLIDG    G ID A  L   MV     P+   ++ L+ 
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738

Query: 408 GLS------------------------KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           GL                         KD N +    L   M E    P++ T S+L+ G
Sbjct: 739 GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSG 798

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L + GR   A        D  + G+C P+  +Y +++ A C + ++  A K+F  + +  
Sbjct: 799 LCRKGRFYEAEQLV---KDMKERGFC-PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 854

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +     Y  ++  L +A ++ +   L  +M++     D ++  V+V G  + G+L
Sbjct: 855 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 910



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 221/432 (51%), Gaps = 8/432 (1%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A NL+ +M++ GI+P+++ +  LI+ L  + K+ EAE +   + +  + P+++TY +
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+C+  +++ A   +  M+     PN VT+  L++GLC  G +  A +    M + G
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P ++ Y   I   C   +  EA+ L + M+K    P+V TY  LI GL  +G+LE A 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           GL  KM KEG++ N VTYN+LI+  C  G    AL +   M   G   N  T++ +I G 
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G+I+ AM L+ +M+    +P VV +  LI+G    GN+    RL   M E    P  
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC--SPNHVLYAAIIQALCYDGQILKA 492
           +T + L+ G  K G++ +A  +F E  +      C  +PN V Y  +I     DG++  A
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVE------CGLNPNPVSYTTLIDGHSKDGKVDIA 574

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L   M      P+  +Y  ++ GL +  R  +   +   M + G++P+ +    ++ G
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634

Query: 553 YQENGDLKSAFR 564
              NG  + AF+
Sbjct: 635 LCRNGRTQFAFK 646



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 201/402 (50%), Gaps = 14/402 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           NP  ++TLI   S+ G ++ AL +  ++E +   P +++ NA++NGL K+ +F    +  
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   GL+ +V+TY  LID  C  G    A  +F +M  +   P +  Y+ LI+GLC E
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EAE + + M   G+ P+  T+ +L+DG+  +  ++ A      M+    +PN  T+
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTY 733

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+ GL K   L        H A +   P           H K  N     +L + M +
Sbjct: 734 SVLLKGLQKECLLLEEKVAVQHEAVYSFSP-----------HEKDVNFEIVSNLLARMSE 782

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P + TY+ L+ GLC  G+   AE L++ M + G   +   Y SL+  +CK  +++ 
Sbjct: 783 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 842

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +   +  KG + ++  + +LI   CKAG ++ A  L+  M+ K    D +V+T L+D
Sbjct: 843 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 902

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           GL K+G +   ++L   M     TP++ T   L   L + G+
Sbjct: 903 GLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D+   P   I  ++I    NE ++         +   G   +LY+ N L+    K   V 
Sbjct: 163 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   Y +ML+  +QP+++TF  L++ L K G++R A      + ++ + P++F Y  LI
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            GHC+  NL  A  +   M K    P+  TY+ LI GLC  G+++ A  +L++M ++GI 
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V TY   I   C     E+A+ + ++M ++G  PNV T+++LI G  + G ++ A+GL
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 402

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y +M+ + LVP+ V + ALI+ L   G     L+++  M       +  T + +I GL  
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G I  A+  F EK  K       P  V Y  +I      G +  A++L   M+ +   P
Sbjct: 463 GGDIEKAMVLF-EKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 518

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  TY  ++ G  +  ++        +M++ G+ P+ V    ++ G+ ++G +  A    
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLL 578

Query: 567 EFLKE 571
           E ++E
Sbjct: 579 ERMEE 583



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 216/449 (48%), Gaps = 4/449 (0%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           ++I  C  + ++ +  +  +E+   G   ++     L+  L     +  A ++++ M   
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ P+L T+N L++   K   V  A     ++  ++L P+V T+  L+ G C+   L  A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  M K G  PN   Y+ LI+G C  G + EA+ +  EM +  I P V+TY + I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC +   E A  L+ +M K G   NV TY +LI G  + G +E A+ +  +M ++G+ PN
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT+++LI+  C  G    A+ ++  M     + +   +  +I GL   G++++ + L++
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +ML+    P+V T ++LI+G    G ++NA        D      C P+   Y  ++   
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL----DLMKENGCEPDEWTYNELVSGF 530

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              G++  AS  F +M    L P+  +YTT++ G  +  ++   + LL  M +MG  P+ 
Sbjct: 531 SKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNV 590

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKES 572
                ++ G  +      A +  + + E 
Sbjct: 591 ESYNAVINGLSKENRFSEAEKICDKMAEQ 619



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 5/345 (1%)

Query: 229 VLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           +LM   C+   E+R   +F   ++  G   +++  N L+    K   +  A +L  +M  
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P + T+N LI  L   G++  AE +L ++++  +  +V TY SLI G+C+  +++ 
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  V  +M ++G +PN VT+S+LI+G C  G +D A+ +  EM+ K + P V  +T  I 
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L    + +E + L   M +    P+V T ++LI GL + G++  A+  +     K    
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY----HKMLKE 409

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y A+I  LC  G+   A K+F  M       +  TY  +++GL     +   
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           M+L   M+KMG +P  V    ++ GY   G++ +A R  + +KE+
Sbjct: 470 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 145/312 (46%), Gaps = 29/312 (9%)

Query: 38  VFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            F   + +E  K  P+++  S+LI    + G  +EA  + +++E   + P      +L++
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI-----DCCCGQGDVM---KAL----- 139
           G +  G+ D  +     MV  G   +  TY VL+     +C   +  V    +A+     
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSP 763

Query: 140 -----------NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
                      NL   M + G EPT+  Y+ L+ GLC + +  EAE + + M+E G  P+
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 823

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
              Y +L+  +CK  +V+ AL+ +H +     Q ++  +  L+  LCK G++  A   F 
Sbjct: 824 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
           +M +     +  V+  L+DG  K G L   M L   ME    +P++ TY IL + L  +G
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943

Query: 309 QLEGAEGLLQKM 320
           +   +E L  K+
Sbjct: 944 KSIESEPLADKL 955



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S+++ ++L+  L K   +  A N + +  +        P+ + +  +I  L   G++ +A
Sbjct: 204 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG----IQPSLLTFNTLINILSKKGKVREA 259

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD-MIKMGIVPDAVINQVMVR 551
             + S +   +L PD  TYT+++ G  R  R LD+   + D M+K G  P++V    ++ 
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCR-NRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 318

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           G    G +  A    E + E  I
Sbjct: 319 GLCNEGRVDEALDMLEEMIEKGI 341


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 161/504 (31%), Positives = 268/504 (53%), Gaps = 8/504 (1%)

Query: 63  SEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF-DSVWEFYEEMVLCGLVAD 118
           S   +I++AL  +  +   +  P I   N LL+ ++K   + D+V    ++M L GL  D
Sbjct: 97  SSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPD 156

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
             T  +LI+C      V    ++  ++I  G++ T+V +  LI+GLC   K  +A  +F 
Sbjct: 157 TYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFD 216

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  P+++TY  +++G CK+ +   A   + +M     QP+VVT+  ++D LCK  
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A + F +M   G+ PNIF YN LI G C      EA ++ +EM    I P++ T++
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +LI   C  G +  A G+L+ M + G+  NVVTY+SL++GY  + ++ +A  +   M  K
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +P+V +++ LI+G CKA  I  A  L+ EM+ + L PD+V +  LIDGL + G ++E 
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L+K ML     P + T S L+ G  K G ++ A   F          Y  PN V+Y  
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF----RAMQSTYLKPNMVMYNI 512

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I A+C    + +A KLFS++    L+P+   YTT++ GL +   + + +    +M + G
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
             P+     V++RG+ ++ D   A
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRA 596



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 260/509 (51%), Gaps = 9/509 (1%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSE 64
           N  L++  R  I    + L    K  H   +V +    +E+   +P  ++   LI  F +
Sbjct: 110 NHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQ 169

Query: 65  MGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +  ++    V  KI  L     I   N L+NGL K GKF    E +++MV  G   DV T
Sbjct: 170 LQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHT 229

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +I+  C  G+ + A  LF +M + G +P VV Y+ +I  LC + ++ EA  +F  M+
Sbjct: 230 YTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G+ PN++TYN+L+ G C  +    A    +EM+  N+ PN+VTF +L++  CK G + 
Sbjct: 290 AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 349

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      M + GV PN+  Y+ L++G+     + EA  L   M      PDVF+YNILI
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C   ++  A+ L  +M  +G+  ++V+YN+LIDG C+ G + +A  +   M   G  
Sbjct: 410 NGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNL 469

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++ T+S L+DG CK G +  A  L+  M    L P++V++  LID + K  N+KE  +L
Sbjct: 470 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 529

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + E+    + P+V   +++I+GL K G +  AL  F  +  + DG  C PN   Y  II+
Sbjct: 530 FSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF--RNMEEDG--CPPNEFSYNVIIR 585

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCT 510
                    +A +L  +MR      D  T
Sbjct: 586 GFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 255/492 (51%), Gaps = 8/492 (1%)

Query: 55  FSTLIIAFSEMGHIEEA-LWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           F+ L+ A  +M H  +A + + +++E+    P     + L+N   +  + D  +    ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL   +VT+  LI+  C  G   +A+ LFD+M+ +G +P V  YT +I+GLC   + 
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V A  +FR M E G  P++ TY+ ++D  CK   VN AL+ +  M    + PN+ T+  L
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC     R A      M    + PNI  ++ LI+  CK GN+FEA  +   M +  +
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+V TY+ L+ G     ++  A  L   M  +G   +V +YN LI+GYCK   + +A  
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M  +G+ P++V++++LIDG C+ G +  A  L+  M+    +PD+  ++ L+DG  
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + +  RL++ M    + P++   + LI  + K+  +  A   F E   +       
Sbjct: 484 KQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG----LQ 539

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN  +Y  II  LC +G + +A + F +M  D   P+  +Y  ++RG L+ K     + L
Sbjct: 540 PNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQL 599

Query: 531 LADMIKMGIVPD 542
           + +M + G V D
Sbjct: 600 IGEMREKGFVAD 611



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 202/423 (47%), Gaps = 38/423 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI    ++G   +A+ ++  +      P +     ++NGL K G+  +    + +M
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM 253

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---- 166
              G   DVVTY  +ID  C    V +AL++F  M  KGI P +  Y  LI GLCN    
Sbjct: 254 GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW 313

Query: 167 -------------------------------ENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                                          E  + EA  + ++M E GV PN+ TY++L
Sbjct: 314 REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL 373

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           M+GY   A+V  A + +  M+    +P+V ++ +L++G CK   +  A   F  M   G+
Sbjct: 374 MNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+I  YN LIDG C+ G L EA  L   M      PD+ TY+IL+ G C  G L  A  
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 493

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L + M    +  N+V YN LID  CK  ++++A  + S++  +G++PNV  ++++I+G C
Sbjct: 494 LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC 553

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +D A+  +  M      P+   +  +I G  +  +    ++L  EM E      V 
Sbjct: 554 KEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVA 613

Query: 436 TVS 438
           T +
Sbjct: 614 TTA 616



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 5/394 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA-LEFYHEMLHHNLQPNVVTFGVL 230
           +A + F  M      P +  +N L+    K+   + A +    +M    L P+  T  +L
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++   ++  +    +    + K G+   I  +N LI+G CK G   +A+ L  +M     
Sbjct: 164 INCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGY 223

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TY  +I GLC +G+   A GL +KM + G   +VVTY+++ID  CK+  + +AL 
Sbjct: 224 QPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 283

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S M  KG+ PN+ T++SLI G C       A  +  EM+  +++P++V F+ LI+   
Sbjct: 284 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 343

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+GN+ E   + K M E  + P+V T SSL++G      +  A   F    D      C 
Sbjct: 344 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF----DVMITKGCK 399

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  +I   C   +I +A +LF++M    L PD  +Y T++ GL +  R+ +   L
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +M+  G +PD     +++ G+ + G L  AFR
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 493



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 5/200 (2%)

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET-LRLYKEMLEAKITPSVFTV 437
           NID A+  +  M+ +   P ++ F  L+  + K  +  +  + L K+M  A ++P  +T+
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
             LI+  F+  R+    +  L K  K          V +  +I  LC  G+  +A +LF 
Sbjct: 161 HMLINCFFQLQRVDLGFSV-LAKIIKLG---LQLTIVTFNTLINGLCKVGKFGQAVELFD 216

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM +   +PD  TYTT++ GL +    +    L   M + G  PD V    ++    ++ 
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276

Query: 558 DLKSAFRCSEFLKESRIGSS 577
            +  A     ++K   I  +
Sbjct: 277 RVNEALDIFSYMKAKGISPN 296


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 255/477 (53%), Gaps = 4/477 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++   K  +FD V     EM    +  DVVT+ V++D     GD   A+ L D M+ 
Sbjct: 160 NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 219

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KG++P +V Y  ++ GLC      +A  +F+ M + GV P++ ++  L+ G+C+V ++  
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 279

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL+ Y EM H  ++P++V+F  L+    + G++  A  +   M  FG+ P+  +Y  +I 
Sbjct: 280 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 339

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG + +A+ +  EM      PDV TYN L+ GLC   +L  AEGLL +M + G+  
Sbjct: 340 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 399

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ T+ +LI GYC EG ++KAL +   M  + + P++VT+++LIDG C+ G++D A  L+
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M  + + P+ V ++ LID   + G +++      EM+   I P++ T +S+I G  ++
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +S    F      K      SP+ + Y  +I     + ++  A KL + M  + ++PD
Sbjct: 520 GNVSKGQKFL----QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             TY  ++ G      + +   +   M   GI PD      M+ G+   G+ K AF+
Sbjct: 576 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 632



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 141/403 (34%), Positives = 226/403 (56%), Gaps = 8/403 (1%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNAL 90
           + VF  ++   +    P V  F+ LI  F  +G IEEAL +Y+++    + P + + + L
Sbjct: 246 WEVFKEMDDFGVA---PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 302

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           +    ++GK D    +  EM   GLV D V Y ++I   C  G +  AL + DEM+  G 
Sbjct: 303 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 362

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P VV Y  L++GLC E ++++AE +   MRE GV P+L T+  L+ GYC    +++AL+
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  ML+  L+P++VT+  L+DG+C+ G+L  A + +  M    +FPN   Y+ LID HC
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G + +A     EM    I P++ TYN +IKG C  G +   +  LQKM    +  +++
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+LI GY KE  M  A  + + M ++ V+P+VVT++ LI+G    GN+  A  ++ +M
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K + PD   + ++I+G    GN KE  +L+ EML+    P 
Sbjct: 603 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 222/427 (51%), Gaps = 4/427 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N++L GL + G +D  WE ++EM   G+  DV ++ +LI   C  G++ +AL +
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           + EM  +GI+P +V ++ LI       KM  A +  R MR  G+VP+   Y  ++ G+C+
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ AL    EM+     P+VVT+  L++GLCK   L  A      M + GV P++  
Sbjct: 344 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +  LI G+C  G L +A+ L   M    + PD+ TYN LI G+C  G L+ A  L   M+
Sbjct: 404 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 463

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
              I  N VTY+ LID +C++G +E A     +M  KG+ PN++T++S+I G C++GN+ 
Sbjct: 464 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 523

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
                  +M++  + PD++ +  LI G  K+  M +  +L   M + K+ P V T + LI
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G   +G +  A   F    +K       P+   Y ++I      G   +A +L  +M  
Sbjct: 584 NGFSVHGNVQEAGWIF----EKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 639

Query: 502 DNLRPDN 508
               PD+
Sbjct: 640 RGFAPDD 646



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 212/416 (50%), Gaps = 4/416 (0%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I++H  C   +  + +++   M +  V P++ T+N ++D   +  D   A+     M+  
Sbjct: 161 IMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK 220

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+P +VT+  ++ GLC+ G    A   F  M  FGV P++  +  LI G C+ G + EA
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + +  EM    I PD+ +++ LI      G+++ A   L++M   G++ + V Y  +I G
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C+ G M  AL V  +M   G  P+VVT+++L++G CK   +  A GL  EM  + + PD
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  FT LI G   +G + + L+L+  ML  ++ P + T ++LI G+ + G +  A + + 
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW- 459

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D        PNHV Y+ +I + C  GQ+  A     +M +  + P+  TY ++++G 
Sbjct: 460 ---DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            R+  +      L  M+   + PD +    ++ GY +   +  AF+    +++ ++
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   ++ +LI       K  EA   FR + +  V       NAL+    +    + A + 
Sbjct: 84  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y  +   N + N  T  +++   CK  E          M K  VFP++  +N ++D   +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG+   AM+L   M    + P + TYN ++KGLC  G  + A  + ++M   G+  +V +
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +  LI G+C+ G++E+AL +  +M  +G++P++V+FS LI    + G +D AM    EM 
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              LVPD V++T +I G  + G M + LR+  EM+     P V T ++L++GL K  R+ 
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A     E  ++       P+   +  +I   C +G++ KA +LF  M +  LRPD  TY
Sbjct: 384 DAEGLLNEMRERG----VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            T++ G+ R   +     L  DM    I P+ V   +++  + E G ++ AF
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 151/286 (52%), Gaps = 12/286 (4%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           + +T NI++   C   + +  + ++ +M K  +  +VVT+N ++D   + GD E A+++ 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M  KG++P +VT++S++ G C++G  D A  ++ EM    + PDV  FT LI G  + 
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF-KNGRISNALNFFLEKTDKTDGGYC-- 469
           G ++E L++YKEM    I P + + S LI GLF + G++ +A+ +  E         C  
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLREMR-------CFG 326

Query: 470 -SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V+Y  +I   C  G +  A ++  +M      PD  TY T+L GL + +R+LD  
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            LL +M + G+ PD      ++ GY   G L  A +  + +   R+
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 255/477 (53%), Gaps = 4/477 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++   K  +FD V     EM    +  DVVT+ V++D     GD   A+ L D M+ 
Sbjct: 99  NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 158

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KG++P +V Y  ++ GLC      +A  +F+ M + GV P++ ++  L+ G+C+V ++  
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 218

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL+ Y EM H  ++P++V+F  L+    + G++  A  +   M  FG+ P+  +Y  +I 
Sbjct: 219 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 278

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG + +A+ +  EM      PDV TYN L+ GLC   +L  AEGLL +M + G+  
Sbjct: 279 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 338

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ T+ +LI GYC EG ++KAL +   M  + + P++VT+++LIDG C+ G++D A  L+
Sbjct: 339 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 398

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M  + + P+ V ++ LID   + G +++      EM+   I P++ T +S+I G  ++
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +S    F      K      SP+ + Y  +I     + ++  A KL + M  + ++PD
Sbjct: 459 GNVSKGQKFL----QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             TY  ++ G      + +   +   M   GI PD      M+ G+   G+ K AF+
Sbjct: 515 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 571



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 225/397 (56%), Gaps = 8/397 (2%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNAL 90
           + VF  ++   +    P V  F+ LI  F  +G IEEAL +Y+++    + P + + + L
Sbjct: 185 WEVFKEMDDFGVA---PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 241

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           +    ++GK D    +  EM   GLV D V Y ++I   C  G +  AL + DEM+  G 
Sbjct: 242 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 301

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P VV Y  L++GLC E ++++AE +   MRE GV P+L T+  L+ GYC    +++AL+
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  ML+  L+P++VT+  L+DG+C+ G+L  A + +  M    +FPN   Y+ LID HC
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G + +A     EM    I P++ TYN +IKG C  G +   +  LQKM    +  +++
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+LI GY KE  M  A  + + M ++ V+P+VVT++ LI+G    GN+  A  ++ +M
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             K + PD   + ++I+G    GN KE  +L+ EML+
Sbjct: 542 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 219/418 (52%), Gaps = 4/418 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N++L GL + G +D  WE ++EM   G+  DV ++ +LI   C  G++ +AL +
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           + EM  +GI+P +V ++ LI       KM  A +  R MR  G+VP+   Y  ++ G+C+
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ AL    EM+     P+VVT+  L++GLCK   L  A      M + GV P++  
Sbjct: 283 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +  LI G+C  G L +A+ L   M    + PD+ TYN LI G+C  G L+ A  L   M+
Sbjct: 343 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
              I  N VTY+ LID +C++G +E A     +M  KG+ PN++T++S+I G C++GN+ 
Sbjct: 403 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 462

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
                  +M++  + PD++ +  LI G  K+  M +  +L   M + K+ P V T + LI
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +G   +G +  A   F    +K       P+   Y ++I      G   +A +L  +M
Sbjct: 523 NGFSVHGNVQEAGWIF----EKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 212/416 (50%), Gaps = 4/416 (0%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I++H  C   +  + +++   M +  V P++ T+N ++D   +  D   A+     M+  
Sbjct: 100 IMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK 159

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+P +VT+  ++ GLC+ G    A   F  M  FGV P++  +  LI G C+ G + EA
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + +  EM    I PD+ +++ LI      G+++ A   L++M   G++ + V Y  +I G
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 279

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C+ G M  AL V  +M   G  P+VVT+++L++G CK   +  A GL  EM  + + PD
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 339

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  FT LI G   +G + + L+L+  ML  ++ P + T ++LI G+ + G +  A + + 
Sbjct: 340 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW- 398

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D        PNHV Y+ +I + C  GQ+  A     +M +  + P+  TY ++++G 
Sbjct: 399 ---DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            R+  +      L  M+   + PD +    ++ GY +   +  AF+    +++ ++
Sbjct: 456 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 511



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   ++ +LI       K  EA   FR + +  V       NAL+    +    + A + 
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y  +   N + N  T  +++   CK  E          M K  VFP++  +N ++D   +
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG+   AM+L   M    + P + TYN ++KGLC  G  + A  + ++M   G+  +V +
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +  LI G+C+ G++E+AL +  +M  +G++P++V+FS LI    + G +D AM    EM 
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              LVPD V++T +I G  + G M + LR+  EM+     P V T ++L++GL K  R+ 
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A     E  ++       P+   +  +I   C +G++ KA +LF  M +  LRPD  TY
Sbjct: 323 DAEGLLNEMRERG----VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            T++ G+ R   +     L  DM    I P+ V   +++  + E G ++ AF
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 430



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 151/286 (52%), Gaps = 12/286 (4%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           + +T NI++   C   + +  + ++ +M K  +  +VVT+N ++D   + GD E A+++ 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M  KG++P +VT++S++ G C++G  D A  ++ EM    + PDV  FT LI G  + 
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF-KNGRISNALNFFLEKTDKTDGGYC-- 469
           G ++E L++YKEM    I P + + S LI GLF + G++ +A+ +  E         C  
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLREMR-------CFG 265

Query: 470 -SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V+Y  +I   C  G +  A ++  +M      PD  TY T+L GL + +R+LD  
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            LL +M + G+ PD      ++ GY   G L  A +  + +   R+
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 254/489 (51%), Gaps = 16/489 (3%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  V P  ++CNALL+ L K G+ D   +F+++M   G+   V TY ++ID  C +GD+
Sbjct: 13  RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 72

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A +LF +M + G  P +V Y  LI G      + E   +F  M++    P++ TYNAL
Sbjct: 73  EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 132

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++ +CK   + +A EF HEM  + L+PNVVT+   +D  CK G L+ A  FFV M +  +
Sbjct: 133 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 192

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN F Y  LID +CKAGNL EA+ L  E+ +  I  +V TY  L+ GLC  G+++ AE 
Sbjct: 193 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 252

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + + M   G+  N  TY +L+ G+ K  +ME A  +  +M EK ++P+++ + +++ G C
Sbjct: 253 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 312

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
               ++ A  L  E+    +  + V++T L+D   K G   E L L +EML+        
Sbjct: 313 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD-------- 364

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
               L+ GL KN     A   F E  DK       P+ + Y A+I      G + +A  L
Sbjct: 365 ----LVDGLCKNNCFEVAKKLFDEMLDKG----MMPDKIAYTALIDGNMKHGNLQEALNL 416

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M    +  D   YT ++ GL  + ++     LL +MI  G++PD V+   +++ Y  
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476

Query: 556 NGDLKSAFR 564
            G +  A  
Sbjct: 477 LGKVDEALE 485



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 219/423 (51%), Gaps = 27/423 (6%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA   F  MR+  V P   + NAL+    KV   + + +F+ +M    ++ +V T+ +++
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK G+L  A + F  M + G  P+I  YN LIDGH K G L E + +  +M+  +  
Sbjct: 64  DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV TYN LI   C   ++  A   L +M   G+  NVVTY++ ID +CKEG +++A+  
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M    + PN  T++SLID  CKAGN+  A+ L  E++   +  +VV +TAL+DGL +
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G MKE   +++ ML A + P+  T ++L+HG  K   +  A +   E  +K       P
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC----IKP 299

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + +LY  I+  LC + ++ +A  L  +++   +  +   YTT++    ++ +  + + LL
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 532 ADMIKM-----------------------GIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            +M+ +                       G++PD +    ++ G  ++G+L+ A    + 
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419

Query: 569 LKE 571
           + E
Sbjct: 420 MIE 422



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 224/476 (47%), Gaps = 40/476 (8%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMG 66
           NA L++ ++    D++    K      +  SVF               ++ +I    + G
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVF--------------TYNIMIDYLCKEG 70

Query: 67  HIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
            +E A  ++ +++     P I   N+L++G  K G  D     +E+M       DV+TY 
Sbjct: 71  DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 130

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            LI+C C    + KA     EM   G++P VV Y+  I   C E  + EA   F  MR  
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 190

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
            + PN +TY +L+D  CK  ++  AL+   E+L   ++ NVVT+  L+DGLC+ G ++ A
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  M   GV PN   Y  L+ G  KA  +  A  +  EM++  I PD+  Y  ++ G
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE------ 357
           LC   +LE A+ L+ ++ + GI  N V Y +L+D Y K G   +AL++  +M +      
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLC 370

Query: 358 -----------------KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
                            KG+ P+ + +++LIDG  K GN+  A+ L   M+   +  D+ 
Sbjct: 371 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 430

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            +TALI GLS  G +++   L  EM+   + P       LI   +  G++  AL  
Sbjct: 431 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 205/416 (49%), Gaps = 52/416 (12%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P +  +++LI    ++G ++E + ++ ++   +  P +   NAL+N   K  +    +
Sbjct: 87  FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146

Query: 105 EFYEEMVLCGLVADVVTYGV-----------------------------------LIDCC 129
           EF  EM   GL  +VVTY                                     LID  
Sbjct: 147 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 206

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G++ +AL L +E++  GI+  VV YT L+ GLC E +M EAE +FR+M   GV PN 
Sbjct: 207 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 266

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TY AL+ G+ K  ++  A +   EM    ++P+++ +G ++ GLC    L  A      
Sbjct: 267 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 326

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           + + G+  N  +Y  L+D + K+G   EA++L  EM              L+ GLC    
Sbjct: 327 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNC 374

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            E A+ L  +M  +G++ + + Y +LIDG  K G++++AL++  +M E G+E ++  +++
Sbjct: 375 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 434

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           LI G   +G +  A  L  EM+ K ++PD VV+  LI      G + E L L  EM
Sbjct: 435 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 490



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 187/359 (52%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +  A E + +M    + P   +   L+  L KVG    +  FF  M   G+  ++F YN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +ID  CK G+L  A SL ++M++   +PD+ TYN LI G   +G L+    + ++M    
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              +V+TYN+LI+ +CK   M KA     +M   G++PNVVT+S+ ID  CK G +  A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
             + +M   +L P+   +T+LID   K GN+ E L+L +E+L+A I  +V T ++L+ GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            + GR+  A   F    +       +PN   Y A++       ++  A  +  +M+   +
Sbjct: 242 CEEGRMKEAEEVFRAMLNAG----VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +PD   Y T+L GL    R+ +  +L+ ++ + GI  +AVI   ++  Y ++G    A 
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 4/338 (1%)

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F+ M KF VFP     N L+    K G    +     +M    I   VFTYNI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  G LE A  L  +M + G   ++VTYNSLIDG+ K G +++ + +  QM +  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            +P+V+T+++LI+  CK   +  A     EM    L P+VV ++  ID   K+G ++E +
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           + + +M    +TP+ FT +SLI    K G ++ AL    E            N V Y A+
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG----IKLNVVTYTAL 237

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC +G++ +A ++F  M +  + P+  TYT ++ G ++AK M     +L +M +  I
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            PD ++   ++ G      L+ A      +KES I ++
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 335



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 168/364 (46%), Gaps = 52/364 (14%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALL 91
             F  L+ ++     P+V  +ST I AF + G ++EA+  +   R++ + P      +L+
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +   K G      +  EE++  G+  +VVTY  L+D  C +G + +A  +F  M++ G+ 
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263

Query: 152 PTVVIYTILIHG-----------------------------------LCNENKMVEAESM 176
           P    YT L+HG                                   LCNE+++ EA+ +
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              ++E G+  N   Y  LMD Y K      AL    EML             L+DGLCK
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCK 371

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                 A   F  M   G+ P+   Y  LIDG+ K GNL EA++L   M +  +  D+  
Sbjct: 372 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 431

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI GL   GQ++ A  LL +M  +G+L + V Y  LI  Y   G +++AL + ++M 
Sbjct: 432 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 491

Query: 357 EKGV 360
           ++G+
Sbjct: 492 KRGM 495


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 287/559 (51%), Gaps = 21/559 (3%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEI---PKFNP--SVFST 57
           ++LA  +LY ++R     V   L+  R+PH +  S+ + L+   +   P+ +   SV  T
Sbjct: 73  HLLARDRLYAHSR----RVLSRLVALRRPH-LAASLVDLLHRAALALGPRRSALASVVDT 127

Query: 58  LIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+   ++ G +++A+      R++ V P  + CN +L  L +      V   +E++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              +V T+ ++ID  C +G++ +A +LF  M + G  P VV +  LI G     ++ E E
Sbjct: 185 -APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   MR  G   ++ TYNAL++ +CK   +  A  ++  M    +  NVVTF   +D  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G +R A   F  M   G+  N F Y CLIDG CKAG L +A+ L  EM +  +  +V
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY +L+ GLC   ++  AE +L+ M K G+ AN + Y +LI G+    + EKAL + S+
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG+E ++  + +LI G C    +D A  L T+M    L P+ +++T ++D   K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E + + +++L++   P+V T  +LI GL K G I  A++ F +  D        PN  
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG----LDPNVQ 539

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y A++  LC +G + +A +LF++M    +  D   YT +L G L+   + D   L A M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599

Query: 535 IKMGIVPDAVINQVMVRGY 553
           I  G+  D       + G+
Sbjct: 600 IDSGLQLDLFCYTCFISGF 618



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 252/473 (53%), Gaps = 7/473 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           ++P  N   F+ +I    + G + EA  ++ +++    LP +   N+L++G  K G+ D 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           V +  EEM   G  ADVVTY  LI+C C  G +  A   F  M  +G+   VV ++  + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             C E  + EA  +F  MR  G+  N +TY  L+DG CK   ++ A+    EM+   +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+ VL+DGLCK  ++  A +    M K GV  N  +Y  LI GH    N  +A+ L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           SEM+   +  D+  Y  LI+GLC V +L+ A+ LL KM + G+  N + Y +++D   K 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G + +A+++  ++ + G +PNV+T+ +LIDG CKAG+ID A+  + +M    L P+V  +
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           TAL+DGL K+G + E ++L+ EM+   ++      ++L+ G  K G + +A   F  K  
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA---FALKAK 598

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             D G    +   Y   I   C    + +A ++FS+M    + PD   Y  ++
Sbjct: 599 MIDSGL-QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + + S++  LI     +  ++EA  +  K++   + P       +++   K GK      
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++++  G   +V+TY  LID  C  G + +A++ F++M D G++P V  YT L+ GLC
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               + EA  +F  M   G+  +   Y AL+DGY K  +++ A     +M+   LQ ++ 
Sbjct: 550 KNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF 609

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +   + G C +  +  A   F  M   G+ P+  VYNCLI  + K GNL EA+SL  EM
Sbjct: 610 CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669

Query: 286 EK 287
           E+
Sbjct: 670 ER 671



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 12/321 (3%)

Query: 247 FVHMAKFGVFPN----IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
            +H A   + P       V + L+      G L +A+   + + +  + P+  T N ++ 
Sbjct: 106 LLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILL 165

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            L      + +  L+++++++    NV T+N +ID  CKEG++ +A S+ S+M E G  P
Sbjct: 166 RLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +VVTF+SLIDG  K G +D    L  EM       DVV + ALI+   K G M+     +
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M    +  +V T S+ +    K G +  A+  F +   +      + N   Y  +I  
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG----MALNEFTYTCLIDG 337

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G++  A  L  +M    +  +  TYT ++ GL + +++ +   +L  M K G+  +
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRAN 397

Query: 543 AVINQVMVRGYQENGDLKSAF 563
            ++   ++ G+  N + + A 
Sbjct: 398 ELLYTTLIHGHFMNKNSEKAL 418


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 266/495 (53%), Gaps = 4/495 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   N LL+ + K  KF+ V    E+M   G+  D+ TY + I+C C +  + 
Sbjct: 76  KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G EP +V  + L++G C+  ++ +A ++   M E G  P+ +T+  L+
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+    +M+    QP++VT+G +++GLCK G++  A +    M K  + 
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ +YN +IDG CK  ++ +A++L +EM+   I PDVFTY+ LI  LC  G+   A  L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  NVVT+++LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C 
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  M+ K   P+VV ++ LI G  K   ++E + L++EM +  +  +  T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG F+     NA   F +           PN + Y  ++  LC +G++ KA  +F
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVG----VHPNILTYNILLDGLCKNGKLAKAMVVF 491

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + PD  TY  M+ G+ +A ++ D   L  ++   G+ P+ +    M+ G+   
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551

Query: 557 GDLKSAFRCSEFLKE 571
           G  + A    + +KE
Sbjct: 552 GSKEEADSLLKKMKE 566



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 248/493 (50%), Gaps = 7/493 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S  I  F     +  AL V  K+  L   P I   ++LLNG     +        ++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D  T+  LI          +A+ L D+M+ +G +P +V Y  +++GLC    +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A S+ + M +  +  ++  YN ++DG CK   ++ AL  + EM +  ++P+V T+  L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC  G    A      M +  + PN+  ++ LID   K G L EA  L  EM K  I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+FTY+ LI G C   +L+ A+ + + M  +    NVVTY++LI G+CK   +E+ + 
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M+++G+  N VT+++LI G  +A + D A  ++ +MV   + P+++ +  L+DGL 
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G + + + +++ +  + + P ++T + +I G+ K G++ +    F   + K      S
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG----VS 535

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y  +I   C  G   +A  L   M+ D   P++ TY T++R  LR         L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595

Query: 531 LADMIKMGIVPDA 543
           + +M   G   DA
Sbjct: 596 IKEMRSCGFAGDA 608



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 241/445 (54%), Gaps = 13/445 (2%)

Query: 134 DVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           D++K   A++LF +M+     P++V +  L+  +   NK     S+   M+  G+  +LY
Sbjct: 60  DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY+  ++ +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 251 AKFGVFPNIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
            + G  P+ F +  LI G   H KA    EA++L  +M +    PD+ TY  ++ GLC  
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G ++ A  LL+KM K  I A+VV YN++IDG CK   M+ AL++ ++M  KG+ P+V T+
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SSLI   C  G    A  L ++M+ + + P+VV F+ALID   K+G + E  +LY EM++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I P +FT SSLI+G   + R+  A + F     K     C PN V Y+ +I+  C   
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYSTLIKGFCKAK 412

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++ +  +LF +M    L  +  TYTT++ G  +A+   +  M+   M+ +G+ P+ +   
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 548 VMVRGYQENGDLKSAFRCSEFLKES 572
           +++ G  +NG L  A    E+L+ S
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRS 497



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 156/306 (50%), Gaps = 6/306 (1%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           K NP+V  FS LI AF + G + EA  +Y    K  + P I   ++L+NG     + D  
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              +E M+      +VVTY  LI   C    V + + LF EM  +G+    V YT LIHG
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                    A+ +F+ M   GV PN+ TYN L+DG CK   + +A+  +  +    ++P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + T+ ++++G+CK G++      F +++  GV PN+  YN +I G C+ G+  EA SL  
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M++    P+  TYN LI+     G  E +  L+++M   G   +  T   L+     +G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDG 621

Query: 344 DMEKAL 349
            ++K+ 
Sbjct: 622 RLDKSF 627



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 4/276 (1%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           IL   L  + +++ A  L   M K     ++V +N L+    K    E  +S+  QM   
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+  ++ T+S  I+  C+   +  A+ +  +M+     PD+V  ++L++G      + + 
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L  +M+E    P  FT ++LIHGLF + + S A+       D+     C P+ V Y  
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL----VDQMVQRGCQPDLVTYGT 228

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC  G I  A  L   M    +  D   Y T++ GL + K M D + L  +M   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           I PD      ++      G    A R    + E +I
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/514 (32%), Positives = 259/514 (50%), Gaps = 11/514 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ +I      G ++EA  +   I      P      +L+ G  K G  D  +E ++ M
Sbjct: 204 TFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM 263

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + VTY  LI+  C +G + +A+++ +EMIDKGIEPTV  YTI I  LC+  + 
Sbjct: 264 VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M++ G  PN+ TY AL+ G  +      A+  YH+ML   L P  VT+  L
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ L   G    A   F  M      PN   YN +I G C  G + +A ++  +M K   
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+V TYNI+I      G +  A  LL+ M   G+  +  TY +LI G+ + G +E A S
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFS 503

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M E G+ PNVVT++++I+G      +D A+ L+ +MV    VP    +  +I G S
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K   + E      +M++  + P+V T +S I GL KNGR S A   F E   +       
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD----YF 619

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y+++I  LC +GQ   A +L      D   P+  TYTT++RGL    R  +   L
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +  M K G+ P   I + ++ G  +N +++SA +
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALK 709



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 207/423 (48%), Gaps = 13/423 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I  F  +G+I++A  ++    K    P +   N +++   K+G  ++     
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   GL  D  TY  LI      G +  A +LF+EM++ GI P VV Y  +I+G    
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTV 530

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +A ++F  M E G VP+  TYN ++ G+ K   ++ A  F  +M+   L PNV+T+
Sbjct: 531 AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +DGLCK G    A   F  M K   FPN+  Y+ LIDG C+ G   +A  L  +   
Sbjct: 591 TSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD--- 647

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+V TY  L++GLCG G+   A+ L++ M K+G+  +   Y +L+ G CK  ++E 
Sbjct: 648 -GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVES 706

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +   M   G +P +  + +LI   CKA     A  ++  M+ K    D VV+T L+D
Sbjct: 707 ALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG------RISNALNFFLEKT 461
           GL K+G    +L L   M     T +  T   L   L   G      +IS  L    EK 
Sbjct: 767 GLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKEKQ 826

Query: 462 DKT 464
            +T
Sbjct: 827 KQT 829



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 5/362 (1%)

Query: 203 ADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            +V R ++   E+   ++    + +F  L+  L K        + ++ M   G+ PN+F 
Sbjct: 145 GEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFT 204

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N +I   C  G + EA  +   +  +   PD FTY  LI G C  G L+ A  +  +M 
Sbjct: 205 FNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMV 264

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+G   N VTY++LI+G C EG +E+A+ +  +M +KG+EP V  ++  I   C AG   
Sbjct: 265 KDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSC 324

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L  +M  +   P+V  +TALI GLS+DG  +  + +Y +ML   + P+  T S+LI
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           + L+  GR   AL  F E     D     PN   Y  II+  C  G I KA+ +F  M  
Sbjct: 385 NQLYVEGRFETALTIF-EWMLSHDS---LPNTETYNVIIKGFCSIGYIQKATAIFDQMLK 440

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               P+  TY  ++    +   M + M LL  M   G+  D      ++ G+   G L+ 
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEH 500

Query: 562 AF 563
           AF
Sbjct: 501 AF 502


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 287/559 (51%), Gaps = 21/559 (3%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEI---PKFNP--SVFST 57
           ++LA  +LY ++R     V   L+  R+PH +  S+ + L+   +   P+ +   SV  T
Sbjct: 73  HLLARDRLYAHSR----RVLSRLVALRRPH-LAASLVDLLHRAALALGPRRSALASVVDT 127

Query: 58  LIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+   ++ G +++A+      R++ V P  + CN +L  L +      V   +E++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              +V T+ ++ID  C +G++ +A +LF  M + G  P VV +  LI G     ++ E E
Sbjct: 185 -APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   MR  G   ++ TYNAL++ +CK   +  A  ++  M    +  NVVTF   +D  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G +R A   F  M   G+  N F Y CLIDG CKAG L +A+ L  EM +  +  +V
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY +L+ GLC   ++  AE +L+ M K G+ AN + Y +LI G+    + EKAL + S+
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG+E ++  + +LI G C    +D A  L T+M    L P+ +++T ++D   K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E + + +++L++   P+V T  +LI GL K G I  A++ F +  D        PN  
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG----LDPNVQ 539

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y A++  LC +G + +A +LF++M    +  D   YT +L G L+   + D   L A M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599

Query: 535 IKMGIVPDAVINQVMVRGY 553
           I  G+  D       + G+
Sbjct: 600 IDSGLQLDLFCYTCFISGF 618



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 252/473 (53%), Gaps = 7/473 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           ++P  N   F+ +I    + G + EA  ++ +++    LP +   N+L++G  K G+ D 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           V +  EEM   G  ADVVTY  LI+C C  G +  A   F  M  +G+   VV ++  + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             C E  + EA  +F  MR  G+  N +TY  L+DG CK   ++ A+    EM+   +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+ VL+DGLCK  ++  A +    M K GV  N  +Y  LI GH    N  +A+ L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           SEM+   +  D+  Y  LI+GLC V +L+ A+ LL KM + G+  N + Y +++D   K 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G + +A+++  ++ + G +PNV+T+ +LIDG CKAG+ID A+  + +M    L P+V  +
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           TAL+DGL K+G + E ++L+ EM+   ++      ++L+ G  K G + +A   F  K  
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA---FALKAK 598

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             D G    +   Y   I   C    + +A ++FS+M    + PD   Y  ++
Sbjct: 599 MIDSGL-QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + + S++  LI     +  ++EA  +  K++   + P       +++   K GK      
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++++  G   +V+TY  LID  C  G + +A++ F++M D G++P V  YT L+ GLC
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               + EA  +F  M   G+  +   Y AL+DGY K  +++ A     +M+   LQ ++ 
Sbjct: 550 KNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF 609

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +   + G C +  +  A   F  M   G+ P+  VYNCLI  + K GNL EA+SL  EM
Sbjct: 610 CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669

Query: 286 EK 287
           E+
Sbjct: 670 ER 671



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 12/321 (3%)

Query: 247 FVHMAKFGVFPN----IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
            +H A   + P       V + L+      G L +A+   + + +  + P+  T N ++ 
Sbjct: 106 LLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILL 165

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            L      + +  L+++++++    NV T+N +ID  CKEG++ +A S+ S+M E G  P
Sbjct: 166 RLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +VVTF+SLIDG  K G +D    L  EM       DVV + ALI+   K G M+     +
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M    +  +V T S+ +    K G +  A+  F +   +      + N   Y  +I  
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG----MALNEFTYTCLIDG 337

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G++  A  L  +M    +  +  TYT ++ GL + +++ +   +L  M K G+  +
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRAN 397

Query: 543 AVINQVMVRGYQENGDLKSAF 563
            ++   ++ G+  N + + A 
Sbjct: 398 ELLYTTLIHGHFMNKNSEKAL 418


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/560 (31%), Positives = 277/560 (49%), Gaps = 46/560 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +FST I AF + G +E+A+ ++    K+ V P +   N L++GL K G  D  + F E+M
Sbjct: 315 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 374

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ A ++TY VLI+         +A ++  E ++KG  P  V+Y  LI G C    +
Sbjct: 375 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA---------------------- 208
            +A  +   M   G+ PN  T N+++ G+CK+  + +A                      
Sbjct: 435 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 494

Query: 209 -------------LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                        L F  EML  N++PN      L+ GLCK G+   A   +  + + G 
Sbjct: 495 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 554

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N+   N LI G CK GN+ EA+ L  +M +     D  TYN LI G C  G++E    
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 614

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L  +M K+GI  +  TYN LI G C+ G +++A+++ ++   + + PNV T+  +IDG C
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  I+    L+TE++ ++L  + VV+  LI    ++GN  E  +L+ +M    I P+  
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLIHG+   GR+ +A        D+       PN V Y A+I   C  GQ+ K   +
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLI----DEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S ++ P+  TYT M+ G  ++  M     LL +M+  GIVPD V   V+  G+ +
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850

Query: 556 NGDLKSAFRCSEFLKESRIG 575
            G ++      + L E  +G
Sbjct: 851 EGKIEEG----KLLAEDGVG 866



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 203/370 (54%), Gaps = 3/370 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP  F+T+I         E AL   R++    + P       L+ GL K+GK     E +
Sbjct: 487 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             ++  G  A++VT   LI   C  G++ +A+ L  +M+++G     + Y  LI G C E
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ E   +   M + G+ P+ +TYN L+ G C++  ++ A+  ++E    +L PNV T+
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           GV++DG CK  ++      F  +    +  N  VYN LI  +C+ GN  EA  L  +M  
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P   TY+ LI G+C +G++E A+ L+ +M KEG+L NVV Y +LI GYCK G M+K
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            ++V  +M+   + PN +T++ +IDG  K+G++  A  L  EMV K +VPD V +  L +
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846

Query: 408 GLSKDGNMKE 417
           G  K+G ++E
Sbjct: 847 GFCKEGKIEE 856



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 223/451 (49%), Gaps = 7/451 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V++TLI  + +MG++ +AL +   +    + P     N+++ G  K G+ +      
Sbjct: 417 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 476

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM+  G   +   +  +I   C       AL    EM+ + + P   + T L+ GLC E
Sbjct: 477 EEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 536

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  +A  ++  + E G   NL T NAL+ G CK  ++  A+    +ML      + +T+
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 596

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G CK G++         M K G+ P+ F YN LI G C+ G L EA++L +E + 
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 656

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++ P+V+TY ++I G C   ++E  E L  ++  + +  N V YN+LI  YC+ G+  +
Sbjct: 657 RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE 716

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M  KG+ P   T+SSLI G C  G ++ A  L  EM  + L+P+VV +TALI 
Sbjct: 717 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 776

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K G M + + + +EM    I P+  T + +I G  K+G +  A     E   K    
Sbjct: 777 GYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG--- 833

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
              P+ V Y  +    C +G+I +   L  D
Sbjct: 834 -IVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 5/288 (1%)

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P V T   L+  L    +LE +  + + M ++G+  +V  +++ I+ +CK G +E A+
Sbjct: 275 VFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAI 333

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M + GV PNVVT+++LI G CK GN+D A     +MV   +   ++ ++ LI+GL
Sbjct: 334 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 393

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K     E   + KE LE   TP+    ++LI G  K G + +AL     + D    G  
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI---RGDMVSKG-I 449

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           +PN V   +IIQ  C  GQ+ +A  +  +M S     +   +TT++  L    R    + 
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            L +M+   + P+  +   +V G  + G    A      L E   G++
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 557



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 5/182 (2%)

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+G++  +  K + P V   T L+  L K   ++++  +++ M +  ++P V+  S+ I+
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAIN 321

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
              K G++ +A+  F    D    G  SPN V Y  +I  LC  G + +A +    M  D
Sbjct: 322 AFCKGGKVEDAIQLFF---DMEKLG-VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 377

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +     TY+ ++ GL++ ++  +   +L + ++ G  P+ V+   ++ GY + G+L  A
Sbjct: 378 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 437

Query: 563 FR 564
            R
Sbjct: 438 LR 439



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 8/138 (5%)

Query: 433 SVFTVSSLIH---GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +V  V  LIH     F+N    NA+  F    +K           L +++++A     ++
Sbjct: 240 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKA----NEL 295

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            K+  +F  MR   + PD   ++T +    +  ++ D + L  DM K+G+ P+ V    +
Sbjct: 296 EKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 354

Query: 550 VRGYQENGDLKSAFRCSE 567
           + G  ++G+L  AFR  E
Sbjct: 355 IHGLCKHGNLDEAFRFKE 372


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 254/485 (52%), Gaps = 10/485 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   LL+GL K   +  V+  Y +M L G+  D  T  +L++C C    V + L +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++ +G  P +V YT LI GLC E+++ +A  +F  M++ G  PN  TY  LM G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 202 VADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
             +++ AL+ + EML+       N +P V+++ +++D LCK      A + F  M   G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +  Y  LI G C  G   EA  L +EM    + P+V T+N+LI  LC  G++  A+ 
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL+ M + GI+ N++TYNSLI+G+C  GD+  A  +   M  KG EP+V+ ++ LI+G C
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++ AM LY  M+     PDV  + AL+ GL + G + +  +L+  M    I   ++
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
                ++GL KNG +  A+  F    +K        +   +  +I  LC  G++  A +L
Sbjct: 454 IYGIFLNGLCKNGCLFEAMELF----NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +  + L+PD  TY  M+    R  +++   +L   M K G  PD +    ++RG+ E
Sbjct: 510 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFE 569

Query: 556 NGDLK 560
           +  L+
Sbjct: 570 SKKLE 574



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 237/468 (50%), Gaps = 12/468 (2%)

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             ++F+  M+       + ++  L+          +   L+++M   GI P      IL+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + LCN N++ E  ++   +   G +P++ TY  L+ G C    +++A   +  M      
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHM----AKFGV--FPNIFVYNCLIDGHCKAGNL 275
           PN +T+G LM GLC+ G +  A      M    + +G+   P +  Y+ +ID  CK    
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM+   ++P V +Y  LI G C  G+ E A+ L  +M  +G+  NVVT+N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID  CKEG + +A  +   M ++G+ PN++T++SLI+G C  G++++A  L+  M  K  
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDV+ +T LI+G  K   ++E ++LY  ML+    P V T  +L+ GLF+ G++ +A  
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438

Query: 456 FF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            F + K     G     +  +Y   +  LC +G + +A +LF+ ++S N++ D   +  +
Sbjct: 439 LFGVMKVYGIPG-----DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + GL +A ++     L   + +  + PD V   +M+  +   G +  A
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 216/413 (52%), Gaps = 9/413 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI        I +A  ++ +++ L   P       L+ GL + G      + ++EM
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227

Query: 111 V----LCGL--VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +    L G+     V++Y ++ID  C      +A +LF+EM  +G+ PTV+ YT LIHG 
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   K  EA+ +F  M   GV PN+ T+N L+D  CK   V  A +    M+   + PN+
Sbjct: 288 CCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNL 347

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L++G C VG+L +A   FV M   G  P++  Y  LI+G+CK   + EAM L + 
Sbjct: 348 LTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 407

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +    PDV TY  L+ GL   G++  A+ L   M   GI  ++  Y   ++G CK G 
Sbjct: 408 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 467

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A+ + +++    ++ ++  F+ LIDG CKAG ++ A  L+ ++  + L PDVV +  
Sbjct: 468 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 527

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +I    + G + +   L+++M +   TP   T ++LI G F++ ++   +   
Sbjct: 528 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 580



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 209/393 (53%), Gaps = 9/393 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFD 101
           N   + TL+      G+I  AL ++++         I   P + + + +++ L K  + D
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + +EEM + G+   V++Y  LI   C  G   +A  LF+EM+++G++P VV + +LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC E K++EA+ +   M + G+VPNL TYN+L++G+C V D+N A E +  M     +
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+ + VL++G CK  ++  A   +  M + G  P++  Y  L+ G  + G + +A  L
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M+ + I  D++ Y I + GLC  G L  A  L  K+    I  ++  +N LIDG CK
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E A  +  ++ ++ ++P+VVT++ +I   C+ G +  A  L+ +M      PD + 
Sbjct: 500 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 559

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           +  LI G  +   +++ + L   M++  ++  V
Sbjct: 560 YATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 12/371 (3%)

Query: 200 CKVADVN--RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           CK  ++   +A +F+H M++ N  P + +F  L+ GL K+         +  M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    N L++  C    + E +++ + + +    PD+ TY  LIKGLC   ++  A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG------VEPNVVTFSSLI 371
            +M K G   N +TY +L+ G C+ G++  AL +  +M           +P V+++S +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           D  CK    D A  L+ EM ++ + P V+ +T+LI G    G  +E  RL+ EM+   + 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V T + LI  L K G++  A +       +       PN + Y ++I+  C  G +  
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG----IVPNLLTYNSLIEGFCLVGDLNS 365

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +LF  M S    PD   YT ++ G  +  ++ + M L   M+++G  PD      ++ 
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425

Query: 552 GYQENGDLKSA 562
           G  + G +  A
Sbjct: 426 GLFQGGKVGDA 436



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 12/338 (3%)

Query: 235 CKVGELRAAGNF-FVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           CK G + A   F F H+  +    P +  +  L+ G  K  +  +   L ++M    ISP
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  T NIL+  LC V ++     ++  + + G + ++VTY +LI G C E  + KA  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV------PDVVVFTALI 406
           ++M + G  PN +T+ +L+ G C+ GNI  A+ L+ EM+  S +      P V+ ++ +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L KD    E   L++EM    +TP+V + +SLIHG    G+   A   F E  ++   
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG-- 307

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN V +  +I  LC +G++++A  L   M    + P+  TY +++ G      +  
Sbjct: 308 --VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              L   M   G  PD +   V++ GY +   ++ A +
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMK 403


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 265/490 (54%), Gaps = 4/490 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++   +   +G+    +F+ V +F ++M L G+  ++ T  ++I+C C       A +
Sbjct: 62  LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYS 121

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G EP    +  LI+GLC E+K+ EA  +   M E G  PN+ TYN++++G C
Sbjct: 122 VLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGIC 181

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  D + AL+   +M   N++ +V T+  ++D LC+ G + AA + F  M   G+  ++ 
Sbjct: 182 KSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLV 241

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G CKAG   + + L  +M   +I P+V T+N+LI      G+L+ A  L ++M
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +GI  N +TYNSL+DGYC +  + +A ++   M      P++VTF+SLI G CK   +
Sbjct: 302 ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D  M L+ ++  + LV + V ++ L+ G  + G ++    L++EM+   + P V T   L
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL  NG++  AL  F E   K+       + V+Y  II+ +C  G++  A  LF  + 
Sbjct: 422 LDGLCDNGKLEKALEIF-EDLQKSKMNL---DIVMYTIIIEGMCKGGKVEDAWNLFCSLP 477

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              ++P+  TYT M+ GL +   + +  +LL  M + G  P+      ++R +  +GDL 
Sbjct: 478 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLT 537

Query: 561 SAFRCSEFLK 570
           ++ +  E +K
Sbjct: 538 ASAKLIEEMK 547



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 229/426 (53%), Gaps = 4/426 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+NGL  + K          MV  G   +VVTY  +++  C  GD   AL+L
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M ++ ++  V  Y+ +I  LC +  +  A S+F+ M   G+  +L TYN+L+ G CK
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N  ++   +M    + PNV+TF VL+D   K G+L+ A   +  M   G+ PN   
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+C    L EA ++   M +   SPD+ T+  LIKG C V +++    L +K+ 
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G++AN VTY+ L+ G+C+ G +E A  +  +M   GV P+V+T+  L+DG C  G ++
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ ++ ++    +  D+V++T +I+G+ K G +++   L+  +    + P+V T + +I
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G +S A N  L K ++ DG    PN   Y  +I+A   DG +  ++KL  +M+S
Sbjct: 493 SGLCKKGSLSEA-NILLRKMEE-DGN--EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 548

Query: 502 DNLRPD 507
                D
Sbjct: 549 CGFSAD 554



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 200/360 (55%), Gaps = 3/360 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +ST+I +    G I+ A+ +++++E   +  ++   N+L+ GL K GK++   +  ++M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ +V+T+ VLID    +G + +A  L+ EMI KGI P  + Y  L+ G C +N++
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA +M   M      P++ T+ +L+ GYCKV  V+  ++ + ++    L  N VT+ +L
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C+ G+L  A   F  M   GV P++  Y  L+DG C  G L +A+ +  +++K ++
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + D+  Y I+I+G+C  G++E A  L   +  +G+  NV+TY  +I G CK+G + +A  
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E G EPN  T+++LI    + G++ A+  L  EM       D      +ID LS
Sbjct: 507 LLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 219/426 (51%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF EMI     P++V ++    G+ +  +        + M   G+  N+YT N +++
Sbjct: 49  AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+      A     +++    +P+  TF  L++GLC   ++  A      M + G  P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  YN +++G CK+G+   A+ L  +M++  +  DVFTY+ +I  LC  G ++ A  L 
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +GI +++VTYNSL+ G CK G     + +   MT + + PNV+TF+ LID   K 
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  LY EM+ K + P+ + + +L+DG      + E   +   M+    +P + T 
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G  K  R+   +  F + + +   G  + N V Y+ ++Q  C  G++  A +LF 
Sbjct: 349 TSLIKGYCKVKRVDEGMKLFRKISKR---GLVA-NTVTYSILVQGFCQSGKLEIAEELFQ 404

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + PD  TY  +L GL    ++   + +  D+ K  +  D V+  +++ G  + G
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464

Query: 558 DLKSAF 563
            ++ A+
Sbjct: 465 KVEDAW 470



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 216/403 (53%), Gaps = 4/403 (0%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F+ M     +P+L  ++    G       N  L+F  +M  + +  N+ T  +++
Sbjct: 48  DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +   A +    + K G  P+   +N LI+G C    + EA+ L + M +    
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V TYN ++ G+C  G    A  LL+KM +  + A+V TY+++ID  C++G ++ A+S+
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  KG++ ++VT++SL+ G CKAG  +  + L  +M  + ++P+V+ F  LID   K
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK 287

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G ++E   LYKEM+   I+P+  T +SL+ G     R+S A N      D      CSP
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML----DLMVRNNCSP 343

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V + ++I+  C   ++ +  KLF  +    L  +  TY+ +++G  ++ ++     L 
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M+ +G++PD +   +++ G  +NG L+ A    E L++S++
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 44/451 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TLI        + EA+  V R +E    P +   N+++NG+ K G      +  
Sbjct: 134 DTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLL 193

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN- 166
            +M    + ADV TY  +ID  C  G +  A++LF EM  KGI+ ++V Y  L+ GLC  
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKA 253

Query: 167 ----------------------------------ENKMVEAESMFRSMRECGVVPNLYTY 192
                                             E K+ EA  +++ M   G+ PN  TY
Sbjct: 254 GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY 313

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N+LMDGYC    ++ A      M+ +N  P++VTF  L+ G CKV  +      F  ++K
Sbjct: 314 NSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK 373

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+  N   Y+ L+ G C++G L  A  L  EM    + PDV TY IL+ GLC  G+LE 
Sbjct: 374 RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEK 433

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  + + + K  +  ++V Y  +I+G CK G +E A ++   +  KGV+PNV+T++ +I 
Sbjct: 434 ALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 493

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G++  A  L  +M      P+   +  LI    +DG++  + +L +EM     + 
Sbjct: 494 GLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 553

Query: 433 SVFTVSSLIHGL------FKNGRISNALNFF 457
              ++  +I  L      FK  R S  +  F
Sbjct: 554 DASSIKMVIDMLSSAVWWFKEPRRSPGVKRF 584



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 7/261 (2%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L Q+M +   L ++V ++    G          L  C +M   G+  N+ T + +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+  C+      A  +  +++     PD   F  LI+GL  +  + E + L   M+E   
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+V T +S+++G+ K+G  S AL+  L K D+ +      +   Y+ II +LC DG I 
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALD-LLRKMDERN---VKADVFTYSTIIDSLCRDGCID 222

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A  LF +M +  ++    TY +++ GL +A +  D + LL DM    I+P+ +   V++
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 551 RGYQENGDLKSAFRCSEFLKE 571
             + + G L+ A   +E  KE
Sbjct: 283 DVFVKEGKLQEA---NELYKE 300



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM+    +P +V F+    G++        L   K+M    I  +++T++ +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  +   A +  L K  K   GY  P+   +  +I  LC + ++ +A  L + M 
Sbjct: 107 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +  +P+  TY +++ G+ ++      + LL  M +  +  D      ++     +G + 
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 561 SAFRCSEFLKESRIGSS 577
           +A    + ++   I SS
Sbjct: 223 AAISLFKEMETKGIKSS 239


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 259/522 (49%), Gaps = 11/522 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY-RKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           + N  V + L+    +   ++EA+ +  R++     +P + +CN LL GL  + + +   
Sbjct: 122 RVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEAL 181

Query: 105 EFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           E    M   G      +VVTY  +ID  C    V +A  +   MIDKG++  VV Y+ +I
Sbjct: 182 ELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTII 241

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC    +  AE + + M + GV P++ TYN ++DG CK   V+RA      M+   ++
Sbjct: 242 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 301

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+VVT+  ++DGLCK   +  A     HM    V P+I  YNCLI G+   G   E +  
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    + PDV TY++L+  LC  G+   A  +   M ++GI  NV  Y  L+ GY  
Sbjct: 362 LEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +     +   M   G+ PN   F+ ++    K   ID AM +++ M    L PDVV 
Sbjct: 422 RGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVT 481

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  LID L K G + + +  + +M+   +TP+    +SL++GL    R   A   F E  
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+       PN V +  I+  LC +GQ++ A +L   M    +RP+  +Y T++ G   A
Sbjct: 542 DQG----VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            R  +   LL  M+ +G+ PD +    ++RGY + G + +A+
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 272/552 (49%), Gaps = 10/552 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I    +   ++ A  V + +   +V P IQ  N L++G +  G++  V    EEM 
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY 366

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  DVVTY +L+D  C  G   +A  +F  MI KGI+P V IY IL+HG      + 
Sbjct: 367 ARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIA 426

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   M   G+ PN Y +N ++  Y K A ++ A+  +  M  H L P+VVT+G+L+
Sbjct: 427 DLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILI 486

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK+G +  A   F  M   GV PN  V+N L+ G C      +A  L  EM    + 
Sbjct: 487 DALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVR 546

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V  +N ++  LC  GQ+  A+ L+  M + G+  NV++YN+LI G+C  G  ++A  +
Sbjct: 547 PNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL 606

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G++P+++++ +L+ G CK G ID A  L+ EM+ K + P  V ++ ++ GL  
Sbjct: 607 LDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFH 666

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
                E   LY  M+++     ++T + +++GL K   +  A   F     K       P
Sbjct: 667 TRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD----LRP 722

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + +  +I  L   G+   A  LF+ + S  L P+  TY  M++ +++   + +   L 
Sbjct: 723 NIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLF 782

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             M K G  PD+V+   ++R     G++    R   +L +    +   E  TT   +   
Sbjct: 783 LAMEKSGCTPDSVMLNAIIRSLLGRGEI---MRAGAYLSKIDEMNFSLEASTTSLLISLF 839

Query: 592 KPTVYKEQDLSI 603
               YK    S+
Sbjct: 840 SREEYKNHAKSL 851



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 181/629 (28%), Positives = 275/629 (43%), Gaps = 123/629 (19%)

Query: 46  EIPKFN--PSVFS--TLIIAFSEMGHIEEALWVYRKI------EVLPAIQACNALLNGLI 95
            +P+F   P+V S  TL+        +EEAL +   +         P +   N +++GL 
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K    D      + M+  G+  DVVTY  +ID  C    V +A  +   MIDKG++P VV
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA------- 208
            Y  +I GLC    +  AE + + M + GV P++ TYN ++DG CK   V+RA       
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 209 --------LEFYH--------------------EMLHHNLQPNVVTFGVLMDGLCKVGEL 240
                   ++ Y+                    EM    L P+VVT+ +L+D LCK G+ 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF------------------------ 276
             A   F  M + G+ PN+ +Y  L+ G+   G +                         
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 277 -----------EAMSLCSEMEKFEISPDVFTYNILIK----------------------- 302
                      EAM + S M +  +SPDV TY ILI                        
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 303 ------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
                       GLC V + E AE L  +M+ +G+  NVV +N+++   C EG +  A  
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   GV PNV+++++LI G C AG  D A  L   MV   L PD++ +  L+ G  
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGY 468
           K G +     L++EML   +TP   T S+++ GLF   R S A   +L   K+ +    Y
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
                  Y  I+  LC    + +A K+F  + S +LRP+  T+T M+  L +  R  D M
Sbjct: 691 T------YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENG 557
            L A +   G+VP+ V   +M++   + G
Sbjct: 745 DLFASIPSHGLVPNVVTYCIMMKNIIQEG 773



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/501 (31%), Positives = 249/501 (49%), Gaps = 23/501 (4%)

Query: 68  IEEALWVYRKIEVLP-----AIQACNALLNGLIKKGKFDSVWE-----FYEEMVLCG--L 115
           I++AL ++   E+LP     +++A N LLN ++ + +  S  E     F      C   +
Sbjct: 30  IDDALKLFD--ELLPHARPASVRAFNHLLN-VVARARCSSTSELAVSLFNRMARACSNKV 86

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-E 174
             D+ TY +L  C C  G +      F  ++  G     V+   L++GLC+  ++ EA +
Sbjct: 87  RPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMD 146

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH---NLQPNVVTFGVLM 231
            + R M E G +PN+ + N L+ G C    V  ALE  H M      N  PNVVT+  ++
Sbjct: 147 ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTII 206

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK   +  A     HM   GV  ++  Y+ +IDG CKA  +  A  +   M    + 
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV TYN +I GLC    ++ AEG+LQ M  +G+  +VVTYN++IDG CK   +++A  V
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M +K V+P++ T++ LI G    G     +    EM  + L PDVV ++ L+D L K
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G   E  +++  M+   I P+V     L+HG    G I++  +      D       SP
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL----DLMVANGISP 442

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N+ ++  ++ A      I +A  +FS M    L PD  TY  ++  L +  R+ D ++  
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
             MI  G+ P++V+   +V G
Sbjct: 503 NQMINDGVTPNSVVFNSLVYG 523



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 3/295 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+T++      G +  A  +   +E   V P + + N L+ G    G+ D   +  
Sbjct: 548 NVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL 607

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + MV  GL  D+++Y  L+   C  G +  A  LF EM+ KG+ P  V Y+ ++ GL + 
Sbjct: 608 DVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHT 667

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA+ ++ +M + G   ++YTYN +++G CK   V+ A + +  +   +L+PN++TF
Sbjct: 668 RRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITF 727

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +++D L K G  + A + F  +   G+ PN+  Y  ++    + G L E  +L   MEK
Sbjct: 728 TIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEK 787

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
              +PD    N +I+ L G G++  A   L K+ +        T + LI  + +E
Sbjct: 788 SGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSRE 842



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 11/294 (3%)

Query: 278 AMSLCSEMEKF---EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           A+SL + M +    ++ PD+ TY+IL    C +G++E        + K G   N V  N 
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 335 LIDGYCKEGDMEKALSVC-SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           L++G C    +++A+ +   +M E G  PNVV+ ++L+ G C    ++ A+ L   M   
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 394 ---SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
              +  P+VV +  +IDGL K   +     + + M++  +   V T S++I GL K   +
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A        DK       P+ V Y  II  LC    + +A  +   M    ++PD  T
Sbjct: 251 DRAEGVLQHMIDKG----VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 306

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           Y T++ GL +A+ +     +L  MI   + PD      ++ GY   G+ K   R
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVR 360


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/454 (34%), Positives = 239/454 (52%), Gaps = 4/454 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+ G    G  D+ WE  E M   G+   VVT+  LI   C    + +A  L++ M+ 
Sbjct: 228 NTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVR 287

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+ P VV  + L+ GLC + +  EA ++FR M + GV PN  TY   +D   KV  VN 
Sbjct: 288 SGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNE 347

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           +L    EM+   +  ++V +  +MD L K G++  A +   H     + PN   Y  L+D
Sbjct: 348 SLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVD 407

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            HC+AGN+  A  +  +ME+  +SP+V T++ ++ GL   G +  A G ++KM   GI  
Sbjct: 408 AHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAP 467

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVTY +LIDG+ K    E AL V   M  +GVE N     SL++G  K GNI+ A  L+
Sbjct: 468 NVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALF 527

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M  + L+ D V +  L+DGL K GNM   L++ +E++E  ++P     +  I+ L + 
Sbjct: 528 KDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRL 587

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G+ S A +F  E  +        P+   Y  +I A C +G   KA KL ++M+  +++P+
Sbjct: 588 GKFSEAKSFLKEMRNTG----LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             TYTT++ GLL A  +     LL +M   G  P
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP 677



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 255/515 (49%), Gaps = 11/515 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA------LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
             ST ++  S  G + EA      L   R I+ L  +   NAL++G  K     +     
Sbjct: 154 TMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL-GVVGWNALIDGYCKVQDMAAALAVV 212

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   GL  DVV Y  L+      GD   A  + + M   G+EP+VV +T LI   C  
Sbjct: 213 ERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKM 272

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA +++  M   GV+P++ T +AL+DG C+    + A   + EM    + PN VT+
Sbjct: 273 KRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTY 332

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +D L KV  +  +      M   GV  ++ +Y  ++D   K G + EA  +      
Sbjct: 333 CTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS 392

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P+  TY +L+   C  G ++GAE +L +M ++ +  NVVT++S+++G  K G + K
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     +M + G+ PNVVT+ +LIDG  K    +AA+ +Y +M+ + +  +  +  +L++
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+GN++E   L+K+M E  +       ++L+ GLFK G +  AL    E  ++    
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN--- 569

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SP+ V+Y   I  LC  G+  +A     +MR+  L PD  TY TM+    R       
Sbjct: 570 -LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + LL +M    I P+ +    +V G  E G ++ A
Sbjct: 629 LKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA 663



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/552 (28%), Positives = 267/552 (48%), Gaps = 48/552 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+ A    G+I+ A  +  ++E   V P +   +++LNGL+K+G       +  +M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 111 VLCGLVADVVTYGVLIDC---CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
              G+  +VVTYG LID    C GQ     AL+++ +M+ +G+E    I   L++GL   
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQ---EAALDVYRDMLHEGVEANNFIVDSLVNGLRKN 517

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EAE++F+ M E G++ +   Y  LMDG  K  ++  AL+   E++  NL P+ V +
Sbjct: 518 GNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVY 577

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V ++ LC++G+   A +F   M   G+ P+   YN +I   C+ GN  +A+ L +EM+ 
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKW 637

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-----------YKE------------- 323
             I P++ TY  L+ GL   G +E A+ LL +M           Y+              
Sbjct: 638 SSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYV 697

Query: 324 -----------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                      G+ A++  YN+L+   C  G   KA  V  +M  +G+ P+ +TF++LI 
Sbjct: 698 ILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALIL 757

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+ ++D A   Y +M+ + L P++  F  L+ GL   G + E   +  EM +  + P
Sbjct: 758 GHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEP 817

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T   L+ G  K      AL  + E   K   G+  P    Y ++I      G + +A
Sbjct: 818 NNLTYDILVTGYAKKSNKVEALRLYCEMVSK---GFI-PKASTYNSLISDFAKAGMMNQA 873

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +LFS+M+   +   + TY  +L G  + +   +V +LL DM ++G  P       M R 
Sbjct: 874 KELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRA 933

Query: 553 YQENGDLKSAFR 564
           + + G    A R
Sbjct: 934 FSKPGMTWEARR 945



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 258/521 (49%), Gaps = 17/521 (3%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV +  TLI  + +M  IEEA  +Y    +  VLP +   +AL++GL + G+F   +  
Sbjct: 257 PSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYAL 316

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G+  + VTY   ID       V ++L L  EM+ +G+   +V+YT ++  L  
Sbjct: 317 FREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGK 376

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EA+ + R      + PN  TY  L+D +C+  +++ A +   +M   ++ PNVVT
Sbjct: 377 EGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVT 436

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  +++GL K G +  A  +   M   G+ PN+  Y  LIDG  K      A+ +  +M 
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +  + F  + L+ GL   G +E AE L + M + G+L + V Y +L+DG  K G+M 
Sbjct: 497 HEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMP 556

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL V  ++ E+ + P+ V ++  I+  C+ G    A     EM    L PD   +  +I
Sbjct: 557 AALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 616

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
               ++GN  + L+L  EM  + I P++ T ++L+ GL + G +  A  + L   +    
Sbjct: 617 SAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA-KYLL--NEMASA 673

Query: 467 GYCSPNHVLYAAIIQALCYDGQ----ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           G+ +P  + Y  ++QA C   +    IL+  +L   M    L  D   Y T++  L    
Sbjct: 674 GF-TPTPLTYRRVLQA-CSGSRSPYVILEVHEL---MMGAGLHADITVYNTLVHVLCCHG 728

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                 ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 729 MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 223/469 (47%), Gaps = 7/469 (1%)

Query: 109 EMVLCGLVAD---VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           EM++ G   D   VV +  LID  C   D+  AL + + M  +G+   VV Y  L+ G  
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFF 235

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                  A  +   M+  GV P++ T+  L+  YCK+  +  A   Y  M+   + P+VV
Sbjct: 236 YSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVV 295

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   L+DGLC+ G    A   F  M K GV PN   Y   ID   K   + E++ L  EM
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               ++ D+  Y  ++  L   G++E A+ +L+    + I  N VTY  L+D +C+ G++
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +  QM EK V PNVVTFSS+++G  K G I  A G   +M    + P+VV +  L
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTL 475

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K    +  L +Y++ML   +  + F V SL++GL KNG I  A   F    D  +
Sbjct: 476 IDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALF---KDMGE 532

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G    +HV YA ++  L   G +  A K+  ++   NL PD   Y   +  L R  +  
Sbjct: 533 RGLLL-DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +    L +M   G+ PD      M+      G+   A +    +K S I
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 265/533 (49%), Gaps = 8/533 (1%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
            Y++F  ++ + +   N   + T I + +++  + E+L +  ++    V   +     ++
Sbjct: 313 AYALFREMDKIGVAP-NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           + L K+GK +   +     +   +  + VTY VL+D  C  G++  A  +  +M +K + 
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV ++ +++GL     + +A    R M++ G+ PN+ TY  L+DG+ K      AL+ 
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y +MLH  ++ N      L++GL K G +  A   F  M + G+  +   Y  L+DG  K
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            GN+  A+ +  E+ +  +SPD   YN+ I  LC +G+   A+  L++M   G+  +  T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++I   C+EG+  KAL + ++M    ++PN++T+++L+ G  +AG ++ A  L  EM 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P  + +  ++   S   +    L +++ M+ A +   +   ++L+H L  +G   
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A        D+  G   +P+ + + A+I   C    +  A   ++ M    L P+  T+
Sbjct: 732 KATIVL----DEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            T+L GL  A R+ +   ++ +M KMG+ P+ +   ++V GY +  +   A R
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALR 840



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 255/598 (42%), Gaps = 83/598 (13%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF- 106
           P    S   +L +AF   G +  A  V   +   P  +    L+  L   G   +   F 
Sbjct: 15  PTLQASFLCSLALAFLRAGRLSAASHVVSSLPAPPPARLLRRLIPALASSGLVAAASRFR 74

Query: 107 --------YEEMVL--CGL--------------------VADVVTYGVLIDCCCGQGDVM 136
                      ++L  C L                     AD V+Y + +     QG   
Sbjct: 75  PVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGR 134

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF------RSMRECGVVPNLY 190
            A  +  EM  +G+    V  +  + GL     + EA ++       R +   GVV    
Sbjct: 135 LAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVV---- 190

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNL------------------------------ 220
            +NAL+DGYCKV D+  AL     M    L                              
Sbjct: 191 GWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM 250

Query: 221 -----QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                +P+VVT   L+   CK+  +  A   +  M + GV P++   + L+DG C+ G  
Sbjct: 251 KADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA +L  EM+K  ++P+  TY   I  L  V ++  + GLL +M   G+  ++V Y ++
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           +D   KEG +E+A  V        + PN VT++ L+D  C+AGNID A  +  +M  KS+
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+VV F+++++GL K G + +     ++M ++ I P+V T  +LI G FK      AL+
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            + +   +        N+ +  +++  L  +G I +A  LF DM    L  D+  Y T++
Sbjct: 491 VYRDMLHEG----VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLM 546

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            GL +   M   + +  ++++  + PDAV+  V +      G    A     FLKE R
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEA---KSFLKEMR 601


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/448 (34%), Positives = 237/448 (52%), Gaps = 9/448 (2%)

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           AD VTY  LI   C    + +AL    +M+ KG  P V  YT +IH LC EN++ EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M    + PN+ TY  L+DG CK   V+ A+    +M      P  VT+  L+ GLCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCK 127

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                 A +    M   G  P+IF Y  LI G CK+    +A+ +  ++      PDV T
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           Y+ LI GLC  G+L+ A  L  +M K G  + N VTYNSLI G+C+ G M++A+++  +M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            E G  P+VVT+++L++G CK   +D A  L  +M  K L PDVV FT+L+DGL ++  +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            + + +  EM     +P+V+T ++++ G  +  ++  A  F LE+ D      C PN V 
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD------CPPNVVS 361

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +  +I+ LC   +  +A +L  + R     PD   YTT++ GL R K++ +   +   M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 536 KM-GIVPDAVINQVMVRGYQENGDLKSA 562
           +  G +P+++    +V G    G L  A
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRA 449



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/489 (31%), Positives = 249/489 (50%), Gaps = 14/489 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI    ++  +E+AL    K+      P +    A+++ L  + +     +F EEM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  +VVTY VLID  C  G V +A+ L  +M  K + PT V Y  LI GLC   + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M   G +P+++TY  L+ G+CK    + AL  + +++    +P+VVT+  L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 231 MDGLCKVGELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G L+ A + F  M K G   PN   YN LI G C+ G + EAM+L   M +  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            SPDV TY  L+ G C + +L+ A  LL +M ++G+  +VVT+ SL+DG C+E  +  A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  K   P V T+++++DG C+A  ++ A     E +     P+VV F  +I GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGL 369

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K     E + L +E    +  P V   +++I GL +  ++  A   + +  ++     C
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG---C 426

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN + Y+ ++  LC  G + +A             P+  TY  ++    +A R  D   
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 530 LLADMIKMG 538
           LL DM++ G
Sbjct: 483 LLDDMVQRG 491



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/470 (32%), Positives = 249/470 (52%), Gaps = 13/470 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            +L+ GL K  + +    F  +MV  G   DV TY  +I   C +  + +A    +EM +
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           + + P VV YT+LI GLC   ++ EA ++   MR+   VP   TYN+L+ G CK    + 
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASE 133

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +   EM++    P++ T+  L+ G CK  +   A   F  +   G  P++  Y+CLID
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 268 GHCKAGNLFEAMSLCSEMEKF-EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           G CK G L EA+ L   M K     P+  TYN LI G C +G+++ A  LL++M + G  
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VVTY +L++G+CK   ++ A  + +QMT KG+ P+VVTF+SL+DG C+   +  A+ +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  KS  P V  +  ++DG  +   ++E  +   E  E    P+V + + +I GL K
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCK 371

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-NLR 505
             R S A+    E   +     C+P+ V+Y  +I  LC + ++ +A +++  M  +    
Sbjct: 372 VNRSSEAMELVEEARRRR----CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           P++ TY+T++ GL  A  MLD        I+ G VP+     +++  +++
Sbjct: 428 PNSITYSTLVTGLCNAG-MLD---RARGYIEKGCVPNIGTYNLLIDAFRK 473



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 216/408 (52%), Gaps = 12/408 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           N   ++ LI    + G ++EA+ +  K+  + +P     N+L++GL K  +    ++  E
Sbjct: 80  NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EMV  G + D+ TY  LI   C       AL +F++++ +G  P VV Y+ LI GLC E 
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 169 KMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++ EA  +F  M + G  +PN  TYN+L+ G+C++  ++ A+     M      P+VVT+
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LM+G CK+  L  A +    M + G+ P++  +  L+DG C+   L +A+ +  EM +
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEG-LLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              SP V+TYN ++ G C   QLE A   +L++M       NVV++N +I G CK     
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSS 376

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-SLVPDVVVFTAL 405
           +A+ +  +   +   P+VV ++++IDG C+   +D A  +Y +M+ +   +P+ + ++ L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           + GL   G M +  R Y   +E    P++ T + LI    K  R  +A
Sbjct: 437 VTGLCNAG-MLDRARGY---IEKGCVPNIGTYNLLIDAFRKANRDEDA 480



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 13/317 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSV 103
           F P V  +S LI    + G ++EA+ ++ ++      +P     N+L++G  + GK D  
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               E M   G   DVVTY  L++  C    +  A +L ++M  KG+ P VV +T L+ G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC EN++ +A  +   MR     P +YTYN ++DGYC+   +  A +F  E +  +  PN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPN 358

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VV+F +++ GLCKV     A        +    P++ +Y  +IDG C+   + EA  +  
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 284 EM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           +M E+    P+  TY+ L+ GLC  G L+ A G ++K    G + N+ TYN LID + K 
Sbjct: 419 KMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKA 474

Query: 343 GDMEKALSVCSQMTEKG 359
              E A  +   M ++G
Sbjct: 475 NRDEDARELLDDMVQRG 491



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 146/274 (53%), Gaps = 6/274 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S D  TY  LI+GLC V +LE A   L KM  +G   +V TY ++I   C E  + +A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M  + + PNVVT++ LIDG CK G +D A+ L ++M  K  VP  V + +LI GL 
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLC 126

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K     E   L +EM+ +   P +FT ++LI G  K+ +  +AL  F +   +   G+  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GF-R 182

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P+ V Y+ +I  LC +G++ +A  LF  M +S +  P+  TY +++ G  R  +M + M 
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           LL  M + G  PD V    ++ G+ +   L  A+
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           S   D V +T+LI GL K   +++ L    +M+     P V+T +++IH L    R+  A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
             F  E  ++      +PN V Y  +I  LC  G++ +A  L S MR   + P   TY +
Sbjct: 66  RKFLEEMANRN----LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNS 120

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           ++ GL +A+R  +   LL +M+  G +PD      ++ G+ ++     A R  E L
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 271/544 (49%), Gaps = 39/544 (7%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P ++   I   S+ G +E+A  ++  +    ++P  QA  +L+ G  ++      +E   
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM    +V    TYG ++   C  GD+  A N+  EMI  G  P VVIYT LI      +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  +A  + + M+E G+ P+++ YN+L+ G  K   ++ A  F  EM+ + L+PN  T+G
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-------- 280
             + G  +  E  +A  +   M + GV PN  +   LI+ +CK G + EA S        
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 281 ---------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
                                      +  EM    I+PDVF+Y +LI G   +G ++ A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  +M +EG+  NV+ YN L+ G+C+ G++EKA  +  +M+ KG+ PN VT+ ++IDG
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+G++  A  L+ EM +K LVPD  V+T L+DG  +  +++  + ++    +     S
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG-CASS 765

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
               ++LI+ +FK G+            D +   +  PN V Y  +I  LC +G +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF  M++ NL P   TYT++L G  +  R  ++  +  + I  GI PD ++  V++  +
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885

Query: 554 QENG 557
            + G
Sbjct: 886 LKEG 889



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 163/576 (28%), Positives = 262/576 (45%), Gaps = 63/576 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  L   +    +IEEA++V+     +E++P +  C  LL+ L++  + D  W+ Y+ M
Sbjct: 153 LFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVM---------------------KALNLFDEMIDKG 149
           V   +V DV TY +LI   C  G+V                       AL L + MI KG
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P    Y +LI GLC   ++ +A+S+   M   GV  + +TY+ L+DG  K  + + A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              HEM+ H +      +   +  + K G +  A   F  M   G+ P    Y  LI+G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+  N+ +   L  EM+K  I    +TY  ++KG+C  G L+GA  ++++M   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LI  + +      A+ V  +M E+G+ P++  ++SLI G  KA  +D A     E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 390 MVIKSLVPDVVVFTALIDG-----------------------------------LSKDGN 414
           MV   L P+   + A I G                                     K G 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E    Y+ M++  I     T + L++GLFKN ++ +A   F E      G   +P+  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE----MRGKGIAPDVF 628

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I      G + KAS +F +M  + L P+   Y  +L G  R+  +     LL +M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
              G+ P+AV    ++ GY ++GDL  AFR  + +K
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 235/483 (48%), Gaps = 4/483 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P     + L++GL K  + +       EM   G+  D  TY +LID      +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  EM+  GI     +Y   I  +  E  M +A+++F  M   G++P    Y +L++GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  +V +  E   EM   N+  +  T+G ++ G+C  G+L  A N    M   G  PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI    +     +AM +  EM++  I+PD+F YN LI GL    +++ A   L +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  N  TY + I GY +  +   A     +M E GV PN V  + LI+  CK G 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A   Y  MV + ++ D   +T L++GL K+  + +   +++EM    I P VF+   
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+G  K G +  A + F E  ++      +PN ++Y  ++   C  G+I KA +L  +M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEG----LTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L P+  TY T++ G  ++  + +   L  +M   G+VPD+ +   +V G     D+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 560 KSA 562
           + A
Sbjct: 749 ERA 751



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 250/476 (52%), Gaps = 15/476 (3%)

Query: 52  PSVF--STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P +F  ++LII  S+   ++EA  ++   +E  + P      A ++G I+  +F S  ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM  CG++ + V    LI+  C +G V++A + +  M+D+GI      YT+L++GL  
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +K+ +AE +FR MR  G+ P++++Y  L++G+ K+ ++ +A   + EM+   L PNV+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+ G C+ GE+  A      M+  G+ PN   Y  +IDG+CK+G+L EA  L  EM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD F Y  L+ G C +  +E A  +     K+G  ++   +N+LI+   K G  E
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 347 KALSVCSQMTEKGVE----PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
               V +++ +   +    PN VT++ +ID  CK GN++AA  L+ +M   +L+P V+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLE 459
           T+L++G  K G   E   ++ E + A I P     S +I+   K G  + AL   +    
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           K    DG  C  +     A++      G++  A K+  +M      PD+ T   ++
Sbjct: 904 KNAVDDG--CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 217/481 (45%), Gaps = 62/481 (12%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L+ AK    AR  + ++ EN LK   P+   Y  F                S  I A SE
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLK---PNAFTYGAF---------------ISGYIEA-SE 537

Query: 65  MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
               ++ +   R+  VLP    C  L+N   KKGK       Y  MV  G++ D  TY V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L++       V  A  +F EM  KGI P V  Y +LI+G      M +A S+F  M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + PN+  YN L+ G+C+  ++ +A E   EM    L PN VT+  ++DG CK G+L  A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL-------CSEME----------- 286
             F  M   G+ P+ FVY  L+DG C+  ++  A+++       C+              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777

Query: 287 -------KFEI-------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
                  K E+              P+  TYNI+I  LC  G LE A+ L  +M    ++
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V+TY SL++GY K G   +   V  +    G+EP+ + +S +I+   K G    A+ L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 387 YTEMVIKSLVPD-----VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             +M  K+ V D     +    AL+ G +K G M+   ++ + M+  +  P   TV  LI
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957

Query: 442 H 442
           +
Sbjct: 958 N 958



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 267/603 (44%), Gaps = 79/603 (13%)

Query: 20  DVTENLLKSRK---PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR 76
           +V  ++L+S++   P  +  S FN ++S ++ +     FS L +     G  E+AL V  
Sbjct: 63  EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVE 121

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-----GLVADVVTYGVLIDCCCG 131
           +                +I++     V E +  +V C     G   D V +G+L D    
Sbjct: 122 R----------------MIERNW--PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIA 163

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +  + +A+ +F   +   + P +    +L+  L   N++     +++ M E  VV ++ T
Sbjct: 164 KEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223

Query: 192 YNALMDGYCKVA---------------------DVNRALEFYHEMLHHNLQPNVVTFGVL 230
           Y+ L+  +C+                       +V+ AL+    M+   L P   T+ VL
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK+  L  A +  V M   GV  +   Y+ LIDG  K  N   A  L  EM    I
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +   + Y+  I  +   G +E A+ L   M   G++     Y SLI+GYC+E ++ +   
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++ +  +  T+ +++ G C +G++D A  +  EM+     P+VV++T LI    
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK------- 463
           ++    + +R+ KEM E  I P +F  +SLI GL K  R+  A +F +E  +        
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523

Query: 464 TDGGYCS------------------------PNHVLYAAIIQALCYDGQILKASKLFSDM 499
           T G + S                        PN VL   +I   C  G++++A   +  M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               +  D  TYT ++ GL +  ++ D   +  +M   GI PD     V++ G+ + G++
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643

Query: 560 KSA 562
           + A
Sbjct: 644 QKA 646



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 44/465 (9%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G   KAL++ + MI++   P   +++ ++   C++         F    + GV+   
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQE--------FVGKSDDGVL--- 153

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
             +  L DGY     +  A+  +   +   L P +    VL+D L +   L    + +  
Sbjct: 154 --FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGN-------LFE--------------AMSLCSEMEKF 288
           M +  V  ++  Y+ LI  HC+AGN       LF+              A+ L   M   
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P  +TY++LI GLC + +LE A+ LL +M   G+  +  TY+ LIDG  K  + + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M   G+      +   I    K G ++ A  L+  M+   L+P    + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             ++ N+++   L  EM +  I  S +T  +++ G+  +G +  A N   E         
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI----ASG 447

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN V+Y  +I+    + +   A ++  +M+   + PD   Y +++ GL +AKRM +  
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
             L +M++ G+ P+A      + GY E  +  SA    +++KE R
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA---DKYVKEMR 549



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 83/337 (24%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS   LI  FS++G++++A  ++ ++    + P +   N LL G  + G+ +   E 
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM + GL  + VTY  +ID  C  GD+ +A  LFDEM  KG+ P   +YT L+ G C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 167 ENKMVEAESMFRSMRE-CGVV-------------------------------------PN 188
            N +  A ++F + ++ C                                        PN
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
             TYN ++D  CK  ++  A E +H+M + NL P V+T+  L++G  K+G        F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 249 HMAKFGVFPNIFVYNCLID----------------------------------------G 268
                G+ P+  +Y+ +I+                                        G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
             K G +  A  +   M + +  PD  T   LI   C
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I    + G++E A  ++ +++   ++P +    +LLNG  K G+   ++ 
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-----IDKGIEPTVVIYTIL 160
            ++E +  G+  D + Y V+I+    +G   KAL L D+M     +D G + ++     L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + G     +M  AE +  +M     +P+  T   L++  C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 271/544 (49%), Gaps = 39/544 (7%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P ++   I   S+ G +E+A  ++  +    ++P  QA  +L+ G  ++      +E   
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM    +V    TYG ++   C  GD+  A N+  EMI  G  P VVIYT LI      +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  +A  + + M+E G+ P+++ YN+L+ G  K   ++ A  F  EM+ + L+PN  T+G
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-------- 280
             + G  +  E  +A  +   M + GV PN  +   LI+ +CK G + EA S        
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 281 ---------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
                                      +  EM    I+PDVF+Y +LI G   +G ++ A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  +M +EG+  NV+ YN L+ G+C+ G++EKA  +  +M+ KG+ PN VT+ ++IDG
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+G++  A  L+ EM +K LVPD  V+T L+DG  +  +++  + ++    +     S
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG-CASS 765

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
               ++LI+ +FK G+            D +   +  PN V Y  +I  LC +G +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF  M++ NL P   TYT++L G  +  R  ++  +  + I  GI PD ++  V++  +
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885

Query: 554 QENG 557
            + G
Sbjct: 886 LKEG 889



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/576 (28%), Positives = 263/576 (45%), Gaps = 63/576 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  L   +   G+IEEA++V+     +E++P +  C  LL+ L++  + D  W+ Y+ M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVM---------------------KALNLFDEMIDKG 149
           V   +V DV TY +LI   C  G+V                       AL L + MI KG
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P    Y +LI GLC   ++ +A+S+   M   GV  + +TY+ L+DG  K  + + A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              HEM+ H +      +   +  + K G +  A   F  M   G+ P    Y  LI+G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+  N+ +   L  EM+K  I    +TY  ++KG+C  G L+GA  ++++M   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LI  + +      A+ V  +M E+G+ P++  ++SLI G  KA  +D A     E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 390 MVIKSLVPDVVVFTALIDG-----------------------------------LSKDGN 414
           MV   L P+   + A I G                                     K G 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E    Y+ M++  I     T + L++GLFKN ++ +A   F E      G   +P+  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE----MRGKGIAPDVF 628

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I      G + KAS +F +M  + L P+   Y  +L G  R+  +     LL +M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
              G+ P+AV    ++ GY ++GDL  AFR  + +K
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 235/483 (48%), Gaps = 4/483 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P     + L++GL K  + +       EM   G+  D  TY +LID      +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  EM+  GI     +Y   I  +  E  M +A+++F  M   G++P    Y +L++GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  +V +  E   EM   N+  +  T+G ++ G+C  G+L  A N    M   G  PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI    +     +AM +  EM++  I+PD+F YN LI GL    +++ A   L +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  N  TY + I GY +  +   A     +M E GV PN V  + LI+  CK G 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A   Y  MV + ++ D   +T L++GL K+  + +   +++EM    I P VF+   
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+G  K G +  A + F E  ++      +PN ++Y  ++   C  G+I KA +L  +M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEG----LTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L P+  TY T++ G  ++  + +   L  +M   G+VPD+ +   +V G     D+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 560 KSA 562
           + A
Sbjct: 749 ERA 751



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 250/476 (52%), Gaps = 15/476 (3%)

Query: 52  PSVF--STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P +F  ++LII  S+   ++EA  ++   +E  + P      A ++G I+  +F S  ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM  CG++ + V    LI+  C +G V++A + +  M+D+GI      YT+L++GL  
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +K+ +AE +FR MR  G+ P++++Y  L++G+ K+ ++ +A   + EM+   L PNV+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+ G C+ GE+  A      M+  G+ PN   Y  +IDG+CK+G+L EA  L  EM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD F Y  L+ G C +  +E A  +     K+G  ++   +N+LI+   K G  E
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 347 KALSVCSQMTEKGVE----PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
               V +++ +   +    PN VT++ +ID  CK GN++AA  L+ +M   +L+P V+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLE 459
           T+L++G  K G   E   ++ E + A I P     S +I+   K G  + AL   +    
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           K    DG  C  +     A++      G++  A K+  +M      PD+ T   ++
Sbjct: 904 KNAVDDG--CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 217/481 (45%), Gaps = 62/481 (12%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L+ AK    AR  + ++ EN LK   P+   Y  F                S  I A SE
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLK---PNAFTYGAF---------------ISGYIEA-SE 537

Query: 65  MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
               ++ +   R+  VLP    C  L+N   KKGK       Y  MV  G++ D  TY V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L++       V  A  +F EM  KGI P V  Y +LI+G      M +A S+F  M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + PN+  YN L+ G+C+  ++ +A E   EM    L PN VT+  ++DG CK G+L  A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL-------CSEME----------- 286
             F  M   G+ P+ FVY  L+DG C+  ++  A+++       C+              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777

Query: 287 -------KFEI-------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
                  K E+              P+  TYNI+I  LC  G LE A+ L  +M    ++
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V+TY SL++GY K G   +   V  +    G+EP+ + +S +I+   K G    A+ L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 387 YTEMVIKSLVPD-----VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             +M  K+ V D     +    AL+ G +K G M+   ++ + M+  +  P   TV  LI
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957

Query: 442 H 442
           +
Sbjct: 958 N 958



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 268/603 (44%), Gaps = 79/603 (13%)

Query: 20  DVTENLLKSRK---PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR 76
           +V  ++L+S++   P  +  S FN ++S ++ +     FS L +     G  E+AL V  
Sbjct: 63  EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVE 121

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-----GLVADVVTYGVLIDCCCG 131
           +                +I++     V E +  +V C     G   D V +G+L D    
Sbjct: 122 R----------------MIERNW--PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIA 163

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +G + +A+ +F   +   + P +    +L+  L   N++     +++ M E  VV ++ T
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223

Query: 192 YNALMDGYCKVA---------------------DVNRALEFYHEMLHHNLQPNVVTFGVL 230
           Y+ L+  +C+                       +V+ AL+    M+   L P   T+ VL
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK+  L  A +  V M   GV  +   Y+ LIDG  K  N   A  L  EM    I
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +   + Y+  I  +   G +E A+ L   M   G++     Y SLI+GYC+E ++ +   
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++ +  +  T+ +++ G C +G++D A  +  EM+     P+VV++T LI    
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK------- 463
           ++    + +R+ KEM E  I P +F  +SLI GL K  R+  A +F +E  +        
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523

Query: 464 TDGGYCS------------------------PNHVLYAAIIQALCYDGQILKASKLFSDM 499
           T G + S                        PN VL   +I   C  G++++A   +  M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               +  D  TYT ++ GL +  ++ D   +  +M   GI PD     V++ G+ + G++
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643

Query: 560 KSA 562
           + A
Sbjct: 644 QKA 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 44/465 (9%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G   KAL++ + MI++   P   +++ ++   C++         F    + GV+   
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQE--------FVGKSDDGVL--- 153

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
             +  L DGY     +  A+  +   +   L P +    VL+D L +   L    + +  
Sbjct: 154 --FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGN-------LFE--------------AMSLCSEMEKF 288
           M +  V  ++  Y+ LI  HC+AGN       LF+              A+ L   M   
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P  +TY++LI GLC + +LE A+ LL +M   G+  +  TY+ LIDG  K  + + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M   G+      +   I    K G ++ A  L+  M+   L+P    + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             ++ N+++   L  EM +  I  S +T  +++ G+  +G +  A N   E         
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI----ASG 447

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN V+Y  +I+    + +   A ++  +M+   + PD   Y +++ GL +AKRM +  
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
             L +M++ G+ P+A      + GY E  +  SA    +++KE R
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA---DKYVKEMR 549



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 83/337 (24%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS   LI  FS++G++++A  ++ ++    + P +   N LL G  + G+ +   E 
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM + GL  + VTY  +ID  C  GD+ +A  LFDEM  KG+ P   +YT L+ G C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 167 ENKMVEAESMFRSMRE-CGVV-------------------------------------PN 188
            N +  A ++F + ++ C                                        PN
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
             TYN ++D  CK  ++  A E +H+M + NL P V+T+  L++G  K+G        F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 249 HMAKFGVFPNIFVYNCLID----------------------------------------G 268
                G+ P+  +Y+ +I+                                        G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
             K G +  A  +   M + +  PD  T   LI   C
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I    + G++E A  ++ +++   ++P +    +LLNG  K G+   ++ 
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-----IDKGIEPTVVIYTIL 160
            ++E +  G+  D + Y V+I+    +G   KAL L D+M     +D G + ++     L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + G     +M  AE +  +M     +P+  T   L++  C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 264/524 (50%), Gaps = 26/524 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPA---------IQACNALLNGLIKKGKFDSVWE 105
           + T++    + G +EEA+ ++   E+  +         ++  N ++ GL +  + D   +
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +E+M    +  D  +YG+LID     G +  A NLF +++  G+ P+ V YT LIHGLC
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             N   +A  +F  M   G  P+  TYN ++D  CK   +  A +   +M+     P+VV
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI---------DGHCKAGNLF 276
           T+  +MDGLCK   +  A   F  M + G  PN   +N +I         D  C+ G L 
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA  L   M      PDV TY+ LI GLC + +++ A  LL+ M K      VVT N+LI
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G CK G +++A  V   M   G  P+VVT+++L+ G C+AG  + A  L ++MV + L 
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+VV +TAL+ GL K   + E   ++ +M  +   P++FT ++LI G    G++   L  
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 669

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD---NCTYTT 513
           F E          SP+HV+Y  +   LC  G+  +A ++  + R ++LR +   +  Y  
Sbjct: 670 FGEMV----CAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEAWGDEVYRF 724

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            + GLL A +M   +  + DM++ G +P       +V G  ++G
Sbjct: 725 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 768



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 166/534 (31%), Positives = 262/534 (49%), Gaps = 22/534 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
             ++++   + G I+EAL VYR+    P +   N LL G   +G+ D   E    M    
Sbjct: 183 LDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE 242

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDE------MIDKGIEPTVVIYTILIHGLCNEN 168
              D V+Y  ++D  C  G V +A+ LF +             P++  Y I+I GLC  +
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EA  MF  M E  V P+ ++Y  L+DG  K   +N A   + ++LH  + P+ V + 
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+ GLC       A   F  M + G  P+   YN +ID  CK G L EA  L  +M + 
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI---------DGY 339
              PDV TYN ++ GLC   ++E A  L  +M + G   N  ++N++I         D  
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C+ G +++A  +  +MT+ G  P+VVT+S+LI G C    +D A  L  +MV +   P V
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V    LI GL K G +KE   +   M+ +  +P V T ++L+HG  + G+   A      
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL-- 600

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
            +D    G  +PN V Y A++  LC   ++ +A  +F+ M+S    P+  TYT ++ G  
Sbjct: 601 -SDMVARGL-APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            A ++   + L  +M+  GI PD V+   +     ++G  +SA R  E L+E R
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG--RSA-RALEILREGR 709



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 170/557 (30%), Positives = 279/557 (50%), Gaps = 34/557 (6%)

Query: 32  HHVCY--SVFNALNSLEI-PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLP-AIQ 85
           H +C   S+  A   LEI P  N S ++ +++A  +   +++AL + R +  + +P A  
Sbjct: 122 HELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAG 181

Query: 86  ACNALLNGLIKKGKFDSVWEFYEE--MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + +++L GL+  G+ D   + Y E     C     +VT  VL++  C +G V KA  L  
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRREPC-----LVTLNVLLEGFCSRGQVDKARELLR 236

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-------LYTYNALM 196
            M D+   P  V Y  ++ GLC   ++ EA  +F   RE     +       L  YN ++
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD-RELPSSSSSSSSPPSLRGYNIVI 295

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C+   ++ A++ + +M   N+ P+  ++G+L+DGL K G+L  A N F  +   GV 
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   Y  LI G C A +  +A  L ++M +    P   TYN++I   C  G LE A  L
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL------ 370
           ++KM ++G + +VVTYN+++DG CK   +E+AL + ++M   G  PN  + +++      
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475

Query: 371 ---IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
              ID  C+ G +D A  L   M     VPDVV ++ LI GL     + +   L ++M++
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            +  P+V T ++LIHGL K GRI  A     E  D       SP+ V Y  ++   C  G
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEA----REVLDAMVSSGQSPDVVTYNTLVHGHCRAG 591

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           Q  +A +L SDM +  L P+  TYT ++ GL +A R+ +   + A M   G  P+     
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 651

Query: 548 VMVRGYQENGDLKSAFR 564
            ++ G+   G +    +
Sbjct: 652 ALILGFCSAGQVDGGLK 668



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 226/461 (49%), Gaps = 22/461 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI   ++ G + +A  +++K+    V P+  A  +L++GL     FD   E + +M 
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G     VTY V+ID  C +G + +A +L  +MI+ G  P VV Y  ++ GLC  +++ 
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 445

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE---------FYHEMLHHNLQP 222
           EA  +F  M   G  PN  ++N ++ G C+ + +++A +             M      P
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVP 505

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +VVT+  L+ GLC +  +  A +    M K    P +   N LI G CKAG + EA  + 
Sbjct: 506 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 565

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M     SPDV TYN L+ G C  GQ E A  LL  M   G+  NVVTY +L+ G CK 
Sbjct: 566 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 625

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             + +A  V +QM   G  PN+ T+++LI G C AG +D  + L+ EMV   + PD VV+
Sbjct: 626 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPS----VFTVSSLIHGLFKNGRISNALNFFL 458
             L   L K G     L + +E  E+  + +    V+  +  + GL + G++  AL F  
Sbjct: 686 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLEAGKMEMALGFV- 742

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
              D   GG   P     A+++  LC  GQ  +A  +  ++
Sbjct: 743 --RDMVRGGQL-PAPERCASLVAGLCKSGQGGEARAVLEEI 780



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 168/358 (46%), Gaps = 26/358 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK---------KGKFD 101
            ++T++    +   +EEAL ++ ++E L   P  ++ N ++ GL +         +GK D
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             +   + M   G V DVVTY  LI   C    V  A +L ++M+ +  +PTVV    LI
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           HGLC   ++ EA  +  +M   G  P++ TYN L+ G+C+     RA E   +M+   L 
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVVT+  L+ GLCK   L  A   F  M   G  PN+F Y  LI G C AG +   + L
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 669

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQ--------LEGAEGLLQKMYKEGILANVVTYN 333
             EM    ISPD   Y  L   LC  G+         EG E L  + + + +      Y 
Sbjct: 670 FGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV------YR 723

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
             +DG  + G ME AL     M   G  P     +SL+ G CK+G    A  +  E++
Sbjct: 724 FAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 240/530 (45%), Gaps = 63/530 (11%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           P +F+++I  +  +G   EA+ ++  +E    P     N L++ L K+ + ++V +  + 
Sbjct: 10  PLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQV 69

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G   D  T+  ++   C  G + +A  + DEM  + I P     + L H LC    
Sbjct: 70  MVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M  A  +   M     V N   YN ++   CK A V+ ALE    M    +         
Sbjct: 130 MERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP-------- 177

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
                       AAG+                 + ++ G   +G + EA+ +  E  +  
Sbjct: 178 -----------LAAGSL----------------DSVLVGLMDSGRIDEALQVYRENRR-- 208

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P + T N+L++G C  GQ++ A  LL+ M  E    + V+Y +++DG CK G +E+A+
Sbjct: 209 -EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAV 267

Query: 350 ------SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
                  + S  +     P++  ++ +I G C+   ID A+ ++ +M  +++ PD   + 
Sbjct: 268 RLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYG 327

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDGL+K G + +   L++++L + +TPS    +SLIHGL       +A   F +   +
Sbjct: 328 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 387

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C P+ V Y  +I A C  G + +A  L   M  D   PD  TY T++ GL ++ R
Sbjct: 388 G----CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN---------GDLKSAFR 564
           + + ++L  +M ++G  P+   +  ++ G  +          G L  AFR
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 9/147 (6%)

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQA 482
           M +  I P+    +S+I G    GR   A+  F  +E+         SP   +Y  +I +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-------SPYPDVYNVLIDS 53

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           L    +     K+   M      PD+ T+TT+L GL +A +M +  +++ +M    I P 
Sbjct: 54  LSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPY 113

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFL 569
              +  +       G ++ AF+  E +
Sbjct: 114 FATSSFLAHELCLRGSMERAFQLLEIM 140


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 237/448 (52%), Gaps = 9/448 (2%)

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           AD VTY  LI   C    + +AL    +M+ KG  P V  YT +IH LC EN++ EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M    + PN+ TY  L+DG CK   V+ A+    +M      P  VT+  L+ GLCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCK 127

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                 A +    M   G  P+IF Y  LI G CK+    +A+ +  ++      PDV T
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           Y+ LI GLC  G+L+ A  L  +M K G  + N VTYNSLI G+C+ G M++A+++  +M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            E G  P+VVT+++L++G CK   +D A  L  +M  K L PDVV FT+L+DGL ++  +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            + + +  EM     +P+V+T ++++ G  +  ++  A  F LE+ D      C PN V 
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD------CPPNVVS 361

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +  +I+ LC   +  +A +L  + R     PD   YTT++ GL R K++ +   +   M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 536 KM-GIVPDAVINQVMVRGYQENGDLKSA 562
           +  G +P+++    ++ G    G L  A
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRA 449



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 249/489 (50%), Gaps = 14/489 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI    ++  +E+AL    K+      P +    A+++ L  + +     +F EEM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  +VVTY VLID  C  G V +A+ L  +M  K + PT V Y  LI GLC   + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M   G +P+++TY  L+ G+CK    + AL  + +++    +P+VVT+  L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 231 MDGLCKVGELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G L+ A + F  M K G   PN   YN LI G C+ G + EAM+L   M +  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            SPDV TY  L+ G C + +L+ A  LL +M ++G+  +VVT+ SL+DG C+E  +  A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  K   P V T+++++DG C+A  ++ A     E +     P+VV F  +I GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGL 369

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K     E + L +E    +  P V   +++I GL +  ++  A   + +  ++     C
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG---C 426

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN + Y+ +I  LC  G + +A             P+  TY  ++    +A R  D   
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 530 LLADMIKMG 538
           LL DM++ G
Sbjct: 483 LLDDMVQRG 491



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/470 (32%), Positives = 249/470 (52%), Gaps = 13/470 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            +L+ GL K  + +    F  +MV  G   DV TY  +I   C +  + +A    +EM +
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           + + P VV YT+LI GLC   ++ EA ++   MR+   VP   TYN+L+ G CK    + 
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASE 133

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +   EM++    P++ T+  L+ G CK  +   A   F  +   G  P++  Y+CLID
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 268 GHCKAGNLFEAMSLCSEMEKF-EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           G CK G L EA+ L   M K     P+  TYN LI G C +G+++ A  LL++M + G  
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VVTY +L++G+CK   ++ A  + +QMT KG+ P+VVTF+SL+DG C+   +  A+ +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  KS  P V  +  ++DG  +   ++E  +   E  E    P+V + + +I GL K
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCK 371

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-NLR 505
             R S A+    E   +     C+P+ V+Y  +I  LC + ++ +A +++  M  +    
Sbjct: 372 VNRSSEAMELVEEARRRR----CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           P++ TY+T++ GL  A  MLD        I+ G VP+     +++  +++
Sbjct: 428 PNSITYSTLITGLCNAG-MLD---RARGYIEKGCVPNIGTYNLLIDAFRK 473



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 220/422 (52%), Gaps = 12/422 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           N   ++ LI    + G ++EA+ +  K+  + +P     N+L++GL K  +    ++  E
Sbjct: 80  NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EMV  G + D+ TY  LI   C       AL +F++++ +G  P VV Y+ LI GLC E 
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 169 KMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++ EA  +F  M + G  +PN  TYN+L+ G+C++  ++ A+     M      P+VVT+
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LM+G CK+  L  A +    M + G+ P++  +  L+DG C+   L +A+ +  EM +
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEG-LLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              SP V+TYN ++ G C   QLE A   +L++M       NVV++N +I G CK     
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSS 376

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-SLVPDVVVFTAL 405
           +A+ +  +   +   P+VV ++++IDG C+   +D A  +Y +M+ +   +P+ + ++ L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL   G M +  R Y   +E    P++ T + LI    K  R  +A     +   +  
Sbjct: 437 ITGLCNAG-MLDRARGY---IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492

Query: 466 GG 467
           GG
Sbjct: 493 GG 494



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 13/317 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSV 103
           F P V  +S LI    + G ++EA+ ++ ++      +P     N+L++G  + GK D  
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               E M   G   DVVTY  L++  C    +  A +L ++M  KG+ P VV +T L+ G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC EN++ +A  +   MR     P +YTYN ++DGYC+   +  A +F  E +  +  PN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPN 358

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VV+F +++ GLCKV     A        +    P++ +Y  +IDG C+   + EA  +  
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 284 EM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           +M E+    P+  TY+ LI GLC  G L+ A G ++K    G + N+ TYN LID + K 
Sbjct: 419 KMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKA 474

Query: 343 GDMEKALSVCSQMTEKG 359
              E A  +   M ++G
Sbjct: 475 NRDEDARELLDDMVQRG 491



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 146/274 (53%), Gaps = 6/274 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S D  TY  LI+GLC V +LE A   L KM  +G   +V TY ++I   C E  + +A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M  + + PNVVT++ LIDG CK G +D A+ L ++M  K  VP  V + +LI GL 
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLC 126

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K     E   L +EM+ +   P +FT ++LI G  K+ +  +AL  F +   +   G+  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GF-R 182

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P+ V Y+ +I  LC +G++ +A  LF  M +S +  P+  TY +++ G  R  +M + M 
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           LL  M + G  PD V    ++ G+ +   L  A+
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           S   D V +T+LI GL K   +++ L    +M+     P V+T +++IH L    R+  A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
             F  E  ++      +PN V Y  +I  LC  G++ +A  L S MR   + P   TY +
Sbjct: 66  RKFLEEMANRN----LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNS 120

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           ++ GL +A+R  +   LL +M+  G +PD      ++ G+ ++     A R  E L
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 258/496 (52%), Gaps = 6/496 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +FN   +  +I  F +     EA  ++    K  + P I   N L++ L KKG      +
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +++  G+  ++ T+ + I   C +G + +A  L + ++ +G+ P V+ Y  LI G C
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K+VEAE     M   GV PN +TYN +++G+CK   +  A +   + +     P+  
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLC  G++  A   F    + G   +I +YN L+ G  K G + +A+ L  +M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +   SPD++TYN+++ GLC +G L  A G+L     +G + ++ T+N+LIDGYCK+ +M
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KA+ +   M   G+ P+V+T+++L++G CKA  +D  +  +  M+ K   P+++ +  L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+   KD  + E + L+KEM    +TP + T+ +LI GL  NG +  A   F+    +  
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
             Y +    ++  +I A C    +  A KLF  M   +  PDN TY  M+    +   + 
Sbjct: 598 FSYST---AIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 526 DVMMLLADMIKMGIVP 541
                L + I  G+VP
Sbjct: 655 LAHTFLLENISKGLVP 670



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 260/503 (51%), Gaps = 42/503 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  ++  +   G ++EA+ V+ +++     P++Q+ NA++N L++ G F    + Y  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 111 VLCGLVADVVTYGVLIDCCC----------------GQGD-------------------V 135
              G+  DV T+ + +   C                GQG                     
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           ++A +LFDEM+ +GI P ++ +  LIH LC +  + E+E +F  + + GV PNL+T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G C+   ++ A      ++   L P+V+++  L+ G CK  +L  A  +   M   GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN F YN +I+G CKAG +  A  +  +       PD FTY+ LI GLC  G +  A  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  +  ++G   +++ YN+L+ G  K+G + +AL +   M E G  P++ T++ +++G C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +  A G+  + + K  +PD+  F  LIDG  K  NM + + +   ML   ITP V 
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L++GL K  ++ N ++ F    +K     C+PN + Y  +I++ C D ++ +A +L
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKG----CTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 496 FSDMRSDNLRPDNCTYTTMLRGL 518
           F +M++  L PD  T  T++ GL
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGL 576



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 213/475 (44%), Gaps = 74/475 (15%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI    + G+++E+  ++ K+    V P +   N  + GL +KG  D      E +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL  DV++Y  LI   C    +++A     +M++ G+EP    Y  +I+G C    M
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE---------------- 214
             A+ + R     G +P+ +TY++L++G C   D+NRA+  ++E                
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 215 -------------------MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                              M+ H   P++ T+ ++++GLCK+G L  A          G 
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+IF +N LIDG+CK  N+ +A+ +   M    I+PDV TYN L+ GLC   +L+    
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             + M ++G   N++TYN LI+ +CK+  + +A+ +  +M  +G+ P++VT  +LI G C
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577

Query: 376 KAGNIDAAMGLYT------------------------------------EMVIKSLVPDV 399
             G +D A  L+                                     +M      PD 
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             +  +ID   K GN+        E +   + PS  T   +++ L    R+S A+
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 4/386 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I  F + G ++ A  + R       +P     ++L+NGL   G  +     +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E +  G    ++ Y  L+     QG V++AL L  +M++ G  P +  Y ++++GLC  
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +       G +P+++T+N L+DGYCK  ++++A+E    ML H + P+V+T+
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++GLCK  +L    + F  M + G  PNI  YN LI+  CK   + EAM L  EM+ 
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDME 346
             ++PD+ T   LI GLC  G+L+ A  L   + KE   + +   +N +I+ +C + ++ 
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVS 619

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M      P+  T+  +ID  CK GNID A     E + K LVP       ++
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITP 432
           + L     + E + +   M++  I P
Sbjct: 680 NCLCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 199/407 (48%), Gaps = 4/407 (0%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +Y  ++     + K+ EA ++F  M      P++ +YNA+M+   +    ++A + Y  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + P+V T  + M   C  G   AA     +M   G   N   Y  +I G  K    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM K  I PD+ T+N LI  LC  G ++ +E L  K+ K G+  N+ T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G C++G +++A  +   +  +G+ P+V+++++LI G CK   +  A     +MV   +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+   +  +I+G  K G M+   ++ ++ +     P  FT SSLI+GL  +G ++ A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E  +K   G+   + +LY  +++ L   G +L+A +L  DM      PD  TY  ++
Sbjct: 378 VFYEAMEK---GF-KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            GL +   + D   +L D I  G +PD      ++ GY +  ++  A
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 192/429 (44%), Gaps = 43/429 (10%)

Query: 132 QGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           Q D + AL +F+++  + G + T+  Y  +I  L    K    E +   MR+  V   + 
Sbjct: 17  QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK-NVDSKML 75

Query: 191 --TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
              Y  +M  Y +   V  A+  +  M  ++ +P+V ++  +M+ L + G    A   ++
Sbjct: 76  EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G++                                   PDV+T+ I +K  C  G
Sbjct: 136 RMKDIGIY-----------------------------------PDVYTHTIRMKSFCITG 160

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           +   A  LL  M  +G   N V+Y ++I G+ KE    +A  +  +M ++G+ P+++TF+
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            LI   CK GN+  +  L+++++ + + P++  F   I GL + G + E  RL + ++  
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            +TP V + ++LI G  K+ ++  A   +L K    + G   PN   Y  II   C  G 
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEA-ECYLHKM--VNSG-VEPNEFTYNTIINGFCKAGM 336

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +  A K+  D       PD  TY++++ GL     M   M +  + ++ G     ++   
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396

Query: 549 MVRGYQENG 557
           +V+G  + G
Sbjct: 397 LVKGLSKQG 405


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/455 (34%), Positives = 251/455 (55%), Gaps = 7/455 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            S LI  F  +G +  +  V  KI  L   P     N L+ GL  KG+      F++++V
Sbjct: 48  LSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVV 107

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D V+YG+L++  C  G+   A+ L   + D+   P VV+Y+ +I GLC +  + 
Sbjct: 108 AQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVD 167

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  ++  M   G+ P++ TY  L+ G+C    +  A    +EM+  N+ PN+ T+  L+
Sbjct: 168 EAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLI 227

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK G+++ + N    M K GV P++ +Y+ L+DG+C  G + +A  +   M +  ++
Sbjct: 228 DTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV++YNI+I GLC   +++ A  LL++M  + ++ + VTY+SLIDG CK G +   L +
Sbjct: 288 PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDL 347

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  +G   N+VT++SL+DG CK  N+D A+ L+ +M  + + P+   +TALIDGL K
Sbjct: 348 TKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +K+   L++ +L       V+T + +I GL K G    AL     K+   D G C P
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAM---KSKMEDNG-CIP 463

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           N V +  II++L    +  KA KL  +M +  L P
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 258/478 (53%), Gaps = 4/478 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I     +L  L+K   + +V    ++M   G+V D+VT  +LI+C C  G +  + +
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G +P  +I   L+ GLC + ++ ++      +   G   +  +Y  L++G C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K+ +   A++    +   + +P+VV +  ++DGLCK   +  A + +  M   G+FP++ 
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LI G C AG L EA  L +EM    I+P+++TYN LI  LC  G+++ ++ LL  M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K+G+  +VV Y+ L+DGYC  G+++KA  +   M + GV P+V +++ +I+G CK   +
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D AM L  EM+ K+++PD V +++LIDGL K G +   L L KEM       ++ T +SL
Sbjct: 307 DEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSL 366

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL KN  +  A+  F++  ++       PN   Y A+I  LC  G++ K   LF  + 
Sbjct: 367 LDGLCKNQNLDKAIALFMKMKERG----IQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
                 D  TYT M+ GL +     + + + + M   G +P+AV  ++++R   E  +
Sbjct: 423 VKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDE 480



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 237/454 (52%), Gaps = 4/454 (0%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+L   +  ++ +G ++            ++L  +M  KGI P +V  +ILI+  C+  +
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M  + S+   + + G  PN    N LM G C   +V ++L F+ +++    Q + V++G+
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GLCK+GE R A      +      P++ +Y+ +IDG CK   + EA  L SEM    
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PDV TY  LI G C  GQL  A GLL +M  + I  N+ TYN+LID  CKEG ++++ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ + MT+KGV+P+VV +S L+DG C  G +  A  ++  MV   + PDV  +  +I+GL
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   + E + L +EML   + P   T SSLI GL K GRI+  L+   E   +      
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQ---- 356

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             N V Y +++  LC +  + KA  LF  M+   ++P+  TYT ++ GL +  R+     
Sbjct: 357 PANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQA 416

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L   ++  G   D     VM+ G  + G    A 
Sbjct: 417 LFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 192/389 (49%), Gaps = 4/389 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +P +  +  ++    K+      +    +M    + P++VT  +L++  C +G++  + +
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               + K G  PN  + N L+ G C  G + +++    ++       D  +Y IL+ GLC
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G+   A  LL+ +       +VV Y+++IDG CK+  +++A  + S+M  +G+ P+V+
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+++LI G C AG +  A GL  EM++K++ P++  +  LID L K+G +KE+  L   M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            +  + P V   S L+ G    G +  A   FL           +P+   Y  II  LC 
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG----VNPDVYSYNIIINGLCK 302

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
             ++ +A  L  +M   N+ PD  TY++++ GL +  R+  ++ L  +M   G   + V 
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              ++ G  +N +L  A      +KE  I
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGI 391


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 258/496 (52%), Gaps = 6/496 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +FN   +  +I  F +     EA  ++    K  + P I   N L++ L KKG      +
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +++  G+  ++ T+ + I   C +G + +A  L + ++ +G+ P V+ Y  LI G C
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K+VEAE     M   GV PN +TYN +++G+CK   +  A +   + +     P+  
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLC  G++  A   F    + G   +I +YN L+ G  K G + +A+ L  +M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +   SPD++TYN+++ GLC +G L  A G+L     +G + ++ T+N+LIDGYCK+ +M
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KA+ +   M   G+ P+V+T+++L++G CKA  +D  +  +  M+ K   P+++ +  L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+   KD  + E + L+KEM    +TP + T+ +LI GL  NG +  A   F+    +  
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
             Y +    ++  +I A C    +  A KLF  M   +  PDN TY  M+    +   + 
Sbjct: 598 FSYST---AIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 526 DVMMLLADMIKMGIVP 541
                L + I  G+VP
Sbjct: 655 LAHTFLLENISKGLVP 670



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 260/503 (51%), Gaps = 42/503 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  ++  +   G ++EA+ V+ +++     P++Q+ NA++N L++ G F    + Y  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 111 VLCGLVADVVTYGVLIDCCC----------------GQGD-------------------V 135
              G+  DV T+ + +   C                GQG                     
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           ++A +LFDEM+ +GI P ++ +  LIH LC +  + E+E +F  + + GV PNL+T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G C+   ++ A      ++   L P+V+++  L+ G CK  +L  A  +   M   GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN F YN +I+G CKAG +  A  +  +       PD FTY+ LI GLC  G +  A  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  +  ++G   +++ YN+L+ G  K+G + +AL +   M E G  P++ T++ +++G C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +  A G+  + + K  +PD+  F  LIDG  K  NM + + +   ML   ITP V 
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L++GL K  ++ N ++ F    +K     C+PN + Y  +I++ C D ++ +A +L
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKG----CTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 496 FSDMRSDNLRPDNCTYTTMLRGL 518
           F +M++  L PD  T  T++ GL
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGL 576



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 213/475 (44%), Gaps = 74/475 (15%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI    + G+++E+  ++ K+    V P +   N  + GL +KG  D      E +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL  DV++Y  LI   C    +++A     +M++ G+EP    Y  +I+G C    M
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE---------------- 214
             A+ + R     G +P+ +TY++L++G C   D+NRA+  ++E                
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 215 -------------------MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                              M+ H   P++ T+ ++++GLCK+G L  A          G 
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+IF +N LIDG+CK  N+ +A+ +   M    I+PDV TYN L+ GLC   +L+    
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             + M ++G   N++TYN LI+ +CK+  + +A+ +  +M  +G+ P++VT  +LI G C
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577

Query: 376 KAGNIDAAMGLYT------------------------------------EMVIKSLVPDV 399
             G +D A  L+                                     +M      PD 
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDN 637

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             +  +ID   K GN+        E +   + PS  T   +++ L    R+S A+
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 196/386 (50%), Gaps = 4/386 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I  F + G ++ A  + R       +P     ++L+NGL   G  +     +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E +  G    ++ Y  L+     QG V++AL L  +M++ G  P +  Y ++++GLC  
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +       G +P+++T+N L+DGYCK  ++++A+E    ML H + P+V+T+
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++GLCK  +L    + F  M + G  PNI  YN LI+  CK   + EAM L  EM+ 
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDME 346
             ++PD+ T   LI GLC  G+L+ A  L   + KE   + +   +N +I+ +C++ ++ 
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVS 619

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M      P+  T+  +ID  CK GNID A     E + K LVP       ++
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITP 432
           + L     + E + +   M++  I P
Sbjct: 680 NCLCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 199/407 (48%), Gaps = 4/407 (0%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +Y  ++     + K+ EA ++F  M      P++ +YNA+M+   +    ++A + Y  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + P+V T  + M   C  G   AA     +M   G   N   Y  +I G  K    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM K  I PD+ T+N LI  LC  G ++ +E L  K+ K G+  N+ T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G C++G +++A  +   +  +G+ P+V+++++LI G CK   +  A     +MV   +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+   +  +I+G  K G M+   ++ ++ +     P  FT SSLI+GL  +G ++ A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E  +K   G+   + +LY  +++ L   G +L+A +L  DM      PD  TY  ++
Sbjct: 378 VFYEAMEK---GF-KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            GL +   + D   +L D I  G +PD      ++ GY +  ++  A
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 191/435 (43%), Gaps = 41/435 (9%)

Query: 132 QGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           Q D + AL +F+++  + G + T+  Y  +I  L    K    E +   MR+      L 
Sbjct: 17  QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76

Query: 191 -TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
             Y  +M  Y +   V  A+  +  M  ++ +P+V ++  +M+ L + G    A   ++ 
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G++                                   PDV+T+ I +K  C  G+
Sbjct: 137 MKDIGIY-----------------------------------PDVYTHTIRMKSFCITGR 161

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A  LL  M  +G   N V+Y ++I G+ KE    +A  +  +M ++G+ P+++TF+ 
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI   CK GN+  +  L+++++ + + P++  F   I GL + G + E  RL + ++   
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +TP V + ++LI G  K+ ++  A  +      K       PN   Y  II   C  G +
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYL----HKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A K+  D       PD  TY++++ GL     M   M +  + ++ G     ++   +
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 550 VRGYQENGDLKSAFR 564
           V+G  + G +  A +
Sbjct: 398 VKGLSKQGLVLQALQ 412


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 260/477 (54%), Gaps = 4/477 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   N LL+ + K  KFD V    E M    +  D+ +Y +LI+C C +  +  AL 
Sbjct: 77  LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M+  G EP +V  + L++G C+  ++ +A ++   M E G  P+  T+N L+ G  
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLF 196

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A+    +M+    QP++VT+G +++GLCK G++  A +    M K  +  ++ 
Sbjct: 197 LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +YN +IDG CK  ++ +A +L ++ME   I PDVFTYN LI  LC  G+   A  LL  M
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            +  I  NVVT+++LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C    +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  ++  M+ K   P+VV +  LI G  K   ++E + L++EM +  +  +  T ++L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+ G    A   F  K   +DG    P+ + Y+ ++  LC  G++ KA  +F  ++
Sbjct: 437 IQGLFQAGDCDMAQKIF--KKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              + PD  TY  M+ G+ +A ++ D   L   +   G+ P+ +I   M+ G+   G
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 257/492 (52%), Gaps = 7/492 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI  F     +  AL V  K+  L   P I   ++LLNG     +        ++MV
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D VT+  LI          +A+ L D+M+ +G +P +V Y  +++GLC    + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A S+ + M +  +  ++  YN ++DG CK   ++ A   +++M    ++P+V T+  L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LC  G    A     +M +  + PN+  ++ LID   K G L EA  L  EM K  I 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+FTY+ LI G C   +L+ A+ + + M  +    NVVTYN+LI G+CK   +E+ + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M+++G+  N VT+++LI G  +AG+ D A  ++ +MV   + PD++ ++ L+DGL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +++ L +++ + ++K+ P ++T + +I G+ K G++ +  + F   + K       P
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----VKP 533

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N ++Y  +I   C  G   +A  LF +M+ D   PD+  Y T++R  LR         L+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593

Query: 532 ADMIKMGIVPDA 543
            +M   G V DA
Sbjct: 594 KEMRSCGFVGDA 605



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 240/474 (50%), Gaps = 9/474 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           + P +   S+L+  +     I +A+ +  ++  +   P     N L++GL    K     
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++MV  G   D+VTYG +++  C +GD+  AL+L  +M    IE  VVIY  +I GL
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + +A ++F  M   G+ P+++TYN+L+   C     + A      M+   + PNV
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNV 325

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+D   K G+L  A   +  M K  + P+IF Y+ LI+G C    L EA  +   
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +  P+V TYN LIKG C   ++E    L ++M + G++ N VTYN+LI G  + GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A  +  +M   GV P+++T+S L+DG CK G ++ A+ ++  +    + PD+  +  
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G+ K G +++   L+  +    + P+V   +++I G  + G    A   F E   K 
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KE 563

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           DG    P+   Y  +I+A   DG    +++L  +MRS     D  T + ++  L
Sbjct: 564 DGTL--PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 231/440 (52%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EM+     P++V +  L+  +    K     S+   M+   +  +LY+YN L++
Sbjct: 64  AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +N LI G   H KA    EA++L  +M +    PD+ TY  ++ GLC  G ++ A 
Sbjct: 184 DTVTFNTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL+KM K  I A+VV YN++IDG CK   ++ A ++ ++M  KG+ P+V T++SLI   
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L + M+ + + P+VV F+ALID   K+G + E  +LY EM++  I P +
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT SSLI+G   + R+  A + F     K     C PN V Y  +I+  C   ++ +  +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TY T+++GL +A        +   M+  G+ PD +   +++ G  
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G L+ A    E+L++S++
Sbjct: 477 KYGKLEKALVVFEYLQKSKM 496



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 239/485 (49%), Gaps = 11/485 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NALLN      K D     + EMV    +  +V +  L+            ++L + M +
Sbjct: 54  NALLNL-----KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQN 108

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
             I   +  Y ILI+  C  +++  A ++   M + G  P++ T ++L++GYC    ++ 
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISD 168

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+    +M+    +P+ VTF  L+ GL    +   A      M + G  P++  Y  +++
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G++  A+SL  +MEK +I  DV  YN +I GLC    ++ A  L  KM  +GI  
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V TYNSLI   C  G    A  + S M E+ + PNVVTFS+LID   K G +  A  LY
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+ +S+ PD+  +++LI+G      + E   +++ M+     P+V T ++LI G  K 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            R+   +  F E + +   G    N V Y  +IQ L   G    A K+F  M SD + PD
Sbjct: 409 KRVEEGMELFREMSQRGLVG----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--C 565
             TY+ +L GL +  ++   +++   + K  + PD     +M+ G  + G ++  +   C
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524

Query: 566 SEFLK 570
           S  LK
Sbjct: 525 SLSLK 529



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 4/403 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  ++    + G I+ AL + +K+E   +   +   N +++GL K    D  +  + +M
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DV TY  LI C C  G    A  L   MI++ I P VV ++ LI     E K+
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VEAE ++  M +  + P+++TY++L++G+C    ++ A   +  M+  +  PNVVT+  L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK   +      F  M++ G+  N   YN LI G  +AG+   A  +  +M    +
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ TY+IL+ GLC  G+LE A  + + + K  +  ++ TYN +I+G CK G +E    
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   ++ KGV+PNV+ ++++I G C+ G  + A  L+ EM     +PD   +  LI    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           +DG+   +  L KEM          T+S +I+ +  +GR+  +
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 7/232 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  F +   +EE + ++R++    ++      N L+ GL + G  D   + +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  G+  D++TY +L+D  C  G + KAL +F+ +    +EP +  Y I+I G+C  
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +   +F S+   GV PN+  Y  ++ G+C+      A   + EM      P+   +
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 573

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI----FVYNCLIDGHCKAGNL 275
             L+    + G+  A+      M   G   +      V N L DG  +   L
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 254/492 (51%), Gaps = 6/492 (1%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC--GQGDV 135
           I  LP +   N LL  L+KK  + +V    ++M L  +  +V T  +LI+C C   +  V
Sbjct: 63  IRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHV 122

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A +   +M   G++PT V +  L++GLC++ K+++A  +F  + + G  P+L TY  +
Sbjct: 123 HFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTI 182

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G CK+     AL+   +M     +P+VV +  ++D LCK      A  FF  M   G+
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y+ ++ G C  G L EA SL  +M    + P+  T+ IL+ GLC  G +  A  
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + + M + G+  +  TY++L+DGYC +  M++A  +   M  KG  P+V  ++ LI+G C
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+  ++ A  L +EM  + L PD V ++ L+ G  + G  +   +L+KEM    + P   
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T S L+ GL K+G +  A        +        P+  +Y  +IQ +C  G++  A +L
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQESK----IEPHICIYNILIQGMCNFGKLEAAREL 478

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           FS++    ++P   TYT M+ GLL+     +   +   M+  G +P++    V ++G+  
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLR 538

Query: 556 NGDLKSAFRCSE 567
           NGD  +A R  E
Sbjct: 539 NGDPSNAVRLIE 550



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 263/515 (51%), Gaps = 10/515 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYE-- 108
           VF+ L+ +  +  H    + + ++++   + P +     L+N L    +    + F    
Sbjct: 71  VFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALG 130

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M   GL    VT+G L++  C +  ++ A+ LFDE+   G  P+++ YT +I GLC   
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
               A  + + M E G  P++  YN ++D  CK    N A+ F+ EM+   + PNVVT+ 
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYS 250

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G C +G+L  A + F  M    V PN   +  L+DG CK G + EA  +   M + 
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + PD +TY+ L+ G C   Q++ A+ L   M  +G   +V  YN LI+G+CK   + +A
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA 370

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            ++ S+M ++ + P+ VT+S+L+ G C+AG    A  L+ EM    L+PD + ++ L+DG
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K G++ E  RL K M E+KI P +   + LI G+   G++  A   F     K     
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG---- 486

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V Y  +I  L  +G   +A ++F  M  +   P++CTY   ++G LR     + +
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L+ +M+  G   D+   Q M+   + N ++ S F
Sbjct: 547 RLIEEMVGRGFSADSSTFQ-MLLDLESNDEIISRF 580



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 234/432 (54%), Gaps = 6/432 (1%)

Query: 33  HVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQAC 87
           HV ++ F+AL  +      P+   F TL+        I +A+ ++ +I  +   P++   
Sbjct: 121 HVHFA-FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITY 179

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
             ++ GL K G   +  +  ++M   G   DVV Y  +ID  C      +A+  F EM+D
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD 239

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +GI P VV Y+ ++HG CN  ++ EA S+F+ M    V+PN  T+  L+DG CK   +  
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILE 299

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   +  M  + ++P+  T+  LMDG C   ++  A   F  M   G  P++ VYN LI+
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           GHCK+  L EA +L SEM   +++PD  TY+ L++G C  G+ + A+ L ++M   G+L 
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP 419

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + +TY+ L+DG CK G +++A  +   M E  +EP++  ++ LI G C  G ++AA  L+
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELF 479

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           + + +K + P VV +T +I GL K+G   E   ++++M+     P+  T +  I G  +N
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539

Query: 448 GRISNALNFFLE 459
           G  SNA+    E
Sbjct: 540 GDPSNAVRLIEE 551



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 209/382 (54%), Gaps = 5/382 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F PS+  ++T+I    ++GH   AL + +K+E     P + A N +++ L K  + +   
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
            F+ EMV  G+  +VVTY  ++   C  G + +A +LF +MI + + P  V +TIL+ GL
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E  ++EA  +F  M E GV P+ YTY+ALMDGYC  + ++ A + +  M+     P+V
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             + +L++G CK   L  A      M    + P+   Y+ L+ G C+AG    A  L  E
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M  + + PD  TY+IL+ GLC  G L+ A  LL+ M +  I  ++  YN LI G C  G 
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A  + S +  KG++P+VVT++ +I G  K G  + A  ++ +MV+   +P+   +  
Sbjct: 472 LEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531

Query: 405 LIDGLSKDGNMKETLRLYKEML 426
            I G  ++G+    +RL +EM+
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMV 553



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 219/411 (53%), Gaps = 6/411 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N + + +A + F  +     +P +  +N L+    K    +  +    +M   N++PNV 
Sbjct: 46  NLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVY 105

Query: 226 TFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           T  +L++ LC      +  A +    M K G+ P    +  L++G C    + +A+ L  
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E+ K   +P + TY  +IKGLC +G    A  LL+KM ++G   +VV YN++ID  CK+ 
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
              +A+   S+M ++G+ PNVVT+SS++ G C  G ++ A  L+ +M+ ++++P+ V FT
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+DGL K+G + E  R+++ M E  + P  +T S+L+ G     ++  A   F    D 
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF----DI 341

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
             G   +P+  +Y  +I   C   ++ +A  L S+M   +L PD  TY+T+++G  +A R
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                 L  +M   G++PD++   +++ G  ++G L  AFR  + ++ES+I
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/431 (31%), Positives = 214/431 (49%), Gaps = 6/431 (1%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
            V  A+  F++++     P VV++  L+  L  +       S+ + M    + PN+YT  
Sbjct: 49  SVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLT 108

Query: 194 ALMDGYCKVA--DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
            L++  C      V+ A     +M    LQP  VTFG L++GLC   ++  A   F  + 
Sbjct: 109 ILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K G  P++  Y  +I G CK G+   A+ L  +ME+    PDV  YN +I  LC   +  
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A     +M  +GI  NVVTY+S++ G+C  G + +A S+  QM  + V PN VTF+ L+
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CK G I  A  ++  M    + PD   ++AL+DG      M E  +L+  M+     
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           PSV   + LI+G  K+ R++ A     E  D+      +P+ V Y+ ++Q  C  G+   
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD----LTPDTVTYSTLMQGFCQAGRPQV 404

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A KLF +M S  L PD+ TY+ +L GL +   + +   LL  M +  I P   I  ++++
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464

Query: 552 GYQENGDLKSA 562
           G    G L++A
Sbjct: 465 GMCNFGKLEAA 475



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 2/192 (1%)

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S  +   + P+ +T            ++  A+  + +++    +P VVVF  L+  L K 
Sbjct: 23  STASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKK 82

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
            +    + L K+M  + I P+V+T++ LI+ L  + R  + ++F      K       P 
Sbjct: 83  KHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR--DHVHFAFSALGKMFKLGLQPT 140

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
           HV +  ++  LC   +I+ A KLF ++      P   TYTT+++GL +     + + LL 
Sbjct: 141 HVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLK 200

Query: 533 DMIKMGIVPDAV 544
            M + G  PD V
Sbjct: 201 KMEEKGCKPDVV 212


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 249/473 (52%), Gaps = 11/473 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I  C +L+ G  + GK        E +   G V DV+TY VLI   C  G++  AL 
Sbjct: 146 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 205

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSM-RECGVVPNLYTYNALMDG 198
           + D M    + P VV Y  ++  LC+  K+ +A E + R + +EC   P++ TY  L++ 
Sbjct: 206 VLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC--YPDVITYTILIEA 260

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK + V +A++   EM +   +P+VVT+ VL++G+CK G L  A  F  +M  +G  PN
Sbjct: 261 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 320

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +N ++   C  G   +A  L S+M +   SP V T+NILI  LC  G L  A  +L+
Sbjct: 321 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 380

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM   G   N ++YN L+ G+CKE  M++A+     M  +G  P++VT+++L+   CK G
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A+ +  ++  K   P ++ +  +IDGLSK G  +  ++L  EM    + P + T S
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SL+ GL + G++  A+ FF +     +G    PN + Y +I+  LC   Q  +A    + 
Sbjct: 501 SLVSGLSREGKVDEAIKFFHD----LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           M S   +P   TYT ++ G+       + + LL ++   G+V  +   QV V+
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 206/406 (50%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ LI  + + G I+ AL V  ++ V P +   N +L  L   GK     E  +  +  
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C +  V +A+ L DEM +KG +P VV Y +LI+G+C E ++ EA
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                +M   G  PN+ T+N ++   C       A +   +ML     P+VVTF +L++ 
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L  A +    M   G  PN   YN L+ G CK   +  A+     M      PD
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+  LC  G+++ A  +L ++  +G    ++TYN++IDG  K G  E+A+ +  
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+SSL+ G  + G +D A+  + ++    + P+ + + +++ GL K  
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                +     M+  +  P+  T + LI G+   G    AL+   E
Sbjct: 546 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 204/391 (52%), Gaps = 5/391 (1%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           NAL  L+     P V  ++T++    + G +++A+ V  +    E  P +     L+   
Sbjct: 202 NALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 261

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K+       +  +EM   G   DVVTY VLI+  C +G + +A+   + M   G +P V
Sbjct: 262 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 321

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           + + I++  +C+  + ++AE +   M   G  P++ T+N L++  C+   + RA++   +
Sbjct: 322 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 381

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  H   PN +++  L+ G CK  ++  A  +   M   G +P+I  YN L+   CK G 
Sbjct: 382 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+ + +++     SP + TYN +I GL  VG+ E A  LL +M ++G+  +++TY+S
Sbjct: 442 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+ G  +EG +++A+     +   G+ PN +T++S++ G CK+   D A+     M+ K 
Sbjct: 502 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 561

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             P    +T LI+G++ +G  KE L L  E+
Sbjct: 562 CKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 195/391 (49%), Gaps = 13/391 (3%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             SM   G +P++    +L+ G+C++    +A      +      P+V+T+ VL+ G CK
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            GE+    N    + +  V P++  YN ++   C +G L +AM +     + E  PDV T
Sbjct: 197 SGEI---DNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253

Query: 297 YNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           Y ILI+  C   GVGQ   A  LL +M  +G   +VVTYN LI+G CKEG +++A+   +
Sbjct: 254 YTILIEATCKESGVGQ---AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 310

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M   G +PNV+T + ++   C  G    A  L ++M+ K   P VV F  LI+ L + G
Sbjct: 311 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 370

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +   + + ++M     TP+  + + L+HG  K  ++  A+ +     D      C P+ 
Sbjct: 371 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL----DIMVSRGCYPDI 426

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  ++ ALC DG++  A ++ + + S    P   TY T++ GL +  +    + LL +
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M + G+ PD +    +V G    G +  A +
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 5/150 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
           LN L     +P +  ++T+I   S++G  E A+ +    R+  + P I   ++L++GL +
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +GK D   +F+ ++   G+  + +TY  ++   C      +A++    MI K  +PT   
Sbjct: 509 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEAT 568

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVV 186
           YTILI G+  E    EA  +   +   G+V
Sbjct: 569 YTILIEGIAYEGLAKEALDLLNELCSRGLV 598


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 262/473 (55%), Gaps = 12/473 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  ++ TLI + S+   + EAL +  ++ ++   P  +  N ++ GL K  + +   +  
Sbjct: 245 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 304

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M++ G   D +TYG L++  C  G V  A +LF  +     +PT VI+  LIHG    
Sbjct: 305 NRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTH 360

Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ +A+++   M    G+VP++ TYN+L+ GY K   V  ALE   +M +   +PNV +
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+DG CK+G++  A N    M+  G+ PN   +NCLI   CK   + EA+ +  EM 
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 480

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    PDV+T+N LI GLC V +++ A  LL+ M  EG++AN VTYN+LI+ + + G+++
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + ++M  +G   + +T++SLI G C+AG +D A  L+ +M+   LVP  +    LI
Sbjct: 541 EARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL + G ++E +   KEM+    TP + T +SLI+GL + GRI + L  F     K   
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQA 656

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
               P+ V Y  ++  LC  G +  A  L  +   D   P++ T++ +L+ L+
Sbjct: 657 EGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 249/508 (49%), Gaps = 9/508 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L  L+           + +M+   +   + T+GV++   C   +V  AL++
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  VIY  LIH L   N++ EA  +   M   G VP+  T+N ++ G CK
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +N A +  + ML     P+ +T+G LM+GLCK+G + AA + F  + K    P   +
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVI 349

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +N LI G    G L +A ++ S+M   + I PDV TYN LI G    G +  A  +L+ M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   NV +Y  L+DG+CK G +++A ++ ++M+  G++PN V F+ LI   CK   I
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ ++ EM  K   PDV  F +LI GL +   +K  L L ++M+   +  +  T ++L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   + G I  A     E   +  G     + + Y ++I+ LC  G++ KA  LF  M 
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQ--GSLL--DEITYNSLIKGLCRAGEVDKARSLFEKML 585

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            D L P + +   ++ GL R+  + + +    +M+  G  PD V    ++ G    G ++
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFL 588
                   L+   I       +T  S+L
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLMSWL 673



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 229/470 (48%), Gaps = 11/470 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RKI   P +     ++  L    + DS      +M   G V + V Y  LI        V
Sbjct: 205 RKIP--PTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 262

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L +EM   G  P    +  +I GLC  +++ EA  M   M   G  P+  TY  L
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFG 254
           M+G CK+  V+ A + ++ +     +P  V F  L+ G    G L  A      M   +G
Sbjct: 323 MNGLCKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 378

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  YN LI G+ K G +  A+ +  +M      P+V++Y IL+ G C +G+++ A 
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M  +G+  N V +N LI  +CKE  + +A+ +  +M  KG +P+V TF+SLI G 
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+   I  A+ L  +M+ + +V + V +  LI+   + G +KE  +L  EM+        
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI GL + G +  A + F EK  + DG    P+ +    +I  LC  G + +A +
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLF-EKMLR-DG--LVPSSISCNILINGLCRSGMVEEAVE 614

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              +M      PD  T+ +++ GL RA R+ D + +   +   GI PD V
Sbjct: 615 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 220/473 (46%), Gaps = 39/473 (8%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           EPT   Y +++  L + N    A ++F  M    + P L+T+  +M   C V +V+ AL 
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +M  H   PN V +  L+  L K   +  A      M   G  P+   +N +I G C
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE------- 323
           K   + EA  + + M     +PD  TY  L+ GLC +G+++ A+ L  ++ K        
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352

Query: 324 -------------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
                                    GI+ +V TYNSLI GY K+G +  AL V   M  K
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +PNV +++ L+DG CK G ID A  L  EM    L P+ V F  LI    K+  + E 
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + +++EM      P V+T +SLI GL +   I +AL  +L +   ++G     N V Y  
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL--WLLRDMISEG--VVANTVTYNT 528

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I A    G+I +A KL ++M       D  TY ++++GL RA  +     L   M++ G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           +VP ++   +++ G   +G ++ A    EF KE  +  S  +  T  S +  L
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAV---EFQKEMVLRGSTPDIVTFNSLINGL 638



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 180/375 (48%), Gaps = 39/375 (10%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFD 101
            IPK    +F+TLI  F   G +++A  V   +     ++P +   N+L+ G  KKG   
Sbjct: 341 RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              E   +M   G   +V +Y +L+D  C  G + +A NL +EM   G++P  V +  LI
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
              C E+++ EA  +FR M   G  P++YT+N+L+ G C+V ++  AL    +M+   + 
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520

Query: 222 PNVVTFGVLMD-----------------------------------GLCKVGELRAAGNF 246
            N VT+  L++                                   GLC+ GE+  A + 
Sbjct: 521 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSL 580

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + G+ P+    N LI+G C++G + EA+    EM     +PD+ T+N LI GLC 
Sbjct: 581 FEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 640

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G++E    + +K+  EGI  + VTYN+L+   CK G +  A  +  +  E G  PN  T
Sbjct: 641 AGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRT 700

Query: 367 FSSLIDGQCKAGNID 381
           +S L+        +D
Sbjct: 701 WSILLQSLVPQETLD 715



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 209/463 (45%), Gaps = 38/463 (8%)

Query: 134 DVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           DV  ++ LF      KG   +  +Y +LI  L +  +    + +   M++ G+V     +
Sbjct: 84  DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLF 143

Query: 193 NALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
            ++M  Y K     +      EM + ++ +P   ++ V+++ L      + A N F  M 
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              + P +F +  ++   C    +  A+S+  +M K    P+   Y  LI  L    ++ 
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 263

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  LL++M+  G + +  T+N +I G CK   + +A  + ++M  +G  P+ +T+  L+
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLM 323

Query: 372 DGQCKAGNIDAAMGLY------TEMVIKSL--------------------------VPDV 399
           +G CK G +DAA  L+      T ++  +L                          VPDV
Sbjct: 324 NGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 383

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             + +LI G  K G +   L + ++M      P+V++ + L+ G  K G+I  A N   E
Sbjct: 384 CTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNE 443

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
            +   DG    PN V +  +I A C + +I +A ++F +M     +PD  T+ +++ GL 
Sbjct: 444 MS--ADG--LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               +   + LL DMI  G+V + V    ++  +   G++K A
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 542



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 5/301 (1%)

Query: 52  PSVFSTLII--AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V+S  I+   F ++G I+EA  +  ++    + P     N L++   K+ +     E 
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 475

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G   DV T+  LI   C   ++  AL L  +MI +G+    V Y  LI+    
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA  +   M   G + +  TYN+L+ G C+  +V++A   + +ML   L P+ ++
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             +L++GLC+ G +  A  F   M   G  P+I  +N LI+G C+AG + + +++  +++
Sbjct: 596 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 655

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PD  TYN L+  LC  G +  A  LL +  ++G + N  T++ L+     +  ++
Sbjct: 656 AEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715

Query: 347 K 347
           +
Sbjct: 716 R 716


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 273/523 (52%), Gaps = 25/523 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKK-----GKFDSVW 104
           PSV  F  L+     MG  +  + +++K+E+L     CNA    ++ K      K     
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR--MPCNAYSFTILMKCFCSCSKLPFAL 136

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + ++   G    VVT+  L+   C +  + +AL+LF +M     +P VV +T L++GL
Sbjct: 137 STFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGL 192

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPN 223
           C E ++VEA ++   M E G+ PN  TY  ++DG CK+ D   AL    +M    ++ PN
Sbjct: 193 CREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPN 252

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VV +  ++DGL K G    A N F+ M +  +FP+I  YNC+I+G C +G   +A  L  
Sbjct: 253 VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQ 312

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM + +I+PDV T++ LI      G+   AE L  +M    I+ + VTY+S+IDG+CK+ 
Sbjct: 313 EMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQN 372

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A  +      KG  P+++TF++LI G C+A  +D  + L  EM    LV + + +T
Sbjct: 373 RLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 432

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF------ 457
            LI G  + G++     L +EM+ + + P+V T ++L+ GL  NG++ +AL  F      
Sbjct: 433 TLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 458 ---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
              ++ +   +G    P+   Y  +I  L  +G+ L+A +L+ +M    + PD  TY++M
Sbjct: 493 KMDIDASRPFNG--VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + GL +  R+ +   +   M      PD V    ++ GY + G
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 273/517 (52%), Gaps = 23/517 (4%)

Query: 61  AFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F E+  +++A+ ++    +   LP++     L+  +++ G+ D V   +++M +  +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +  ++ +L+ C C    +  AL+ F ++   G  PTVV +  L+HGLC E+++ EA  +F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M +    PN+ T+  LM+G C+   V  A+     ML   LQPN +T+G ++DG+CK+
Sbjct: 175 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 238 GELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           G+  +A N    M +   + PN+ +YN +IDG  K G   +A +L  EM++ EI PD+ T
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN +I G C  G+   AE LLQ+M +  I  +VVT+++LI+ + KEG   +A  +  +M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            + + P+ VT+SS+IDG CK   +DAA  ++     K   PD++ F  LI G  +   + 
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + ++L  EM EA +  +  T ++LIHG  + G ++ A +   E       G C PN V  
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS---GVC-PNVVTC 466

Query: 477 AAIIQALCYDGQILKASKLFSDMRS-----------DNLRPDNCTYTTMLRGLLRAKRML 525
             ++  LC +G++  A ++F  M+            + + PD  TY  ++ GL+   + L
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   L  +M   GIVPD +    M+ G  +   L  A
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 164/537 (30%), Positives = 263/537 (48%), Gaps = 19/537 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           F+P+V  F+TL+        I EAL ++ ++   P +     L+NGL ++G+        
Sbjct: 147 FHPTVVTFNTLLHGLCVEDRISEALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALL 205

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCN 166
           + M+  GL  + +TYG ++D  C  GD + ALNL  +M +   I P VVIY  +I GL  
Sbjct: 206 DRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWK 265

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + +  +A ++F  M+E  + P++ TYN +++G+C     + A +   EML   + P+VVT
Sbjct: 266 DGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVT 325

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L++   K G+   A   +  M    + P+   Y+ +IDG CK   L  A  +     
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               SPD+ T+N LI G C   +++    LL +M + G++AN +TY +LI G+C+ GD+ 
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 445

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-----------VIKSL 395
            A  +  +M   GV PNVVT ++L+DG C  G +  A+ ++  M               +
Sbjct: 446 AAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGV 505

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDV  +  LI GL  +G   E   LY+EM    I P   T SS+I GL K  R+  A  
Sbjct: 506 EPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    D       SP+ V +  +I   C  G +    +LF +M    +  D  TY T++
Sbjct: 566 MF----DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            G  +   +   + +  +MI  G+ PD +  + M+ G     +L+ A    E L+ S
Sbjct: 622 YGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMS 678



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 234/437 (53%), Gaps = 21/437 (4%)

Query: 37  SVFNALNSLE-----IPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACN 88
           S  N L  +E     IP  N  +++T+I    + G   +A  ++   ++ E+ P I   N
Sbjct: 235 SALNLLRKMEEVSHIIP--NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYN 292

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            ++NG    G++    +  +EM+   +  DVVT+  LI+    +G   +A  L+DEM+ +
Sbjct: 293 CMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPR 352

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            I P+ V Y+ +I G C +N++  AE MF      G  P++ T+N L+ GYC+   V+  
Sbjct: 353 SIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDG 412

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           ++  HEM    L  N +T+  L+ G C+VG+L AA +    M   GV PN+   N L+DG
Sbjct: 413 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDG 472

Query: 269 HCKAGNLFEAMSLCSEMEKFE-----------ISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            C  G L +A+ +   M+K +           + PDV TYNILI GL   G+   AE L 
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   GI+ + +TY+S+IDG CK+  +++A  +   M  K   P+VVTF++LI G CKA
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D  + L+ EM  + +V D + +  LI G  K  N+   L +++EM+ + + P   T+
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITI 652

Query: 438 SSLIHGLFKNGRISNAL 454
            +++ GL+    +  A+
Sbjct: 653 RNMLTGLWSKEELERAV 669



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 9/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF  M+     P+V+ +  L+  +    +     S+ + M    +  N Y++  LM 
Sbjct: 65  AIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMK 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C  + +  AL  + ++      P VVTF  L+ GLC    +  A + F  M K    P
Sbjct: 125 CFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----P 180

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  +  L++G C+ G + EA++L   M +  + P+  TY  ++ G+C +G    A  LL
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240

Query: 318 QKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +KM +   I+ NVV YN++IDG  K+G    A ++  +M EK + P++VT++ +I+G C 
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCI 300

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G    A  L  EM+ + + PDVV F+ALI+   K+G   E   LY EML   I PS  T
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SS+I G  K  R+  A + F     K     CSP+ + +  +I   C   ++    KL 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKG----CSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +  TYTT++ G  +   +     LL +MI  G+ P+ V    ++ G  +N
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476

Query: 557 GDLKSAFRCSEFLKESRI 574
           G LK A    + +++S++
Sbjct: 477 GKLKDALEMFKAMQKSKM 494



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 168/334 (50%), Gaps = 9/334 (2%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G  ++  L  A + F +M +    P++  +  L+    + G     +SL  +ME   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +  + +++ IL+K  C   +L  A     K+ K G    VVT+N+L+ G C E  + +AL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  QM     +PNVVTF++L++G C+ G +  A+ L   M+   L P+ + +  ++DG+
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 410 SKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            K G+    L L ++M E + I P+V   +++I GL+K+GR S+A N F+E  +K     
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE---- 283

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V Y  +I   C  G+   A +L  +M    + PD  T++ ++   ++  +  +  
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAE 343

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L  +M+   I+P  V    M+ G+ +   L +A
Sbjct: 344 ELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 287/564 (50%), Gaps = 15/564 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y  AR ++K+++   L S K   V    F AL  +  +   NPSVF  LI  
Sbjct: 80  HILVRARMYDPARHILKELS---LMSGKSSFV----FGALMATYRLCNSNPSVFDILIRV 132

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+++L ++R + +    P++  CNA+L  ++K  +  SVW F +EM+   +  D
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPD 192

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G   K+  L  +M   G  PT+V Y  ++H  C + +   A  +  
Sbjct: 193 VATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   GV  ++ TYN L+   C+     +      +M    + PN VT+  L++G    G
Sbjct: 253 HMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEG 312

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A      M  FG+ PN   +N LIDGH   GN  EA+ +   ME   +     +Y 
Sbjct: 313 KVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYG 372

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L+ GLC   + + A G   +M + G+    +TY  +IDG CK G +++A+ + ++M++ 
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKD 432

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++P++VT+S+LI+G C+ G +  A  +   +    L P+ ++++ LI    + G +KET
Sbjct: 433 GIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKET 492

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           +R+Y+ M+    TP  FT + L+  L K G+++ A  F   +   +DG    PN V +  
Sbjct: 493 IRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFM--RCMTSDG--ILPNAVSFDC 548

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G+ LKA  +F +M      P   TY ++L+GL +   ++     L  +  + 
Sbjct: 549 LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVP 608

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
              D V+   ++    ++G+L  A
Sbjct: 609 AAVDTVMCNTLITAMCKSGNLDKA 632



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 243/493 (49%), Gaps = 13/493 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  + P     N LLNG   +GK     +   EM+  GL  + VT+  LID    +G+ 
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL +F  M  KG+  T V Y +L+ GLC   +   A   +  M+  GV     TY  +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG CK   ++ A+   +EM    + P++VT+  L++G C+VG L+ A      + + G+
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y+ LI   C+ G L E + +   M     +PD FT+N+L+  LC  G++  AE 
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            ++ M  +GIL N V+++ LI+GY   G+  KA SV  +MT+ G  P   T+ SL+ G C
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 376 KAGNIDAAMGLYTEMVIKSL--VP---DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           K G++ AA     E  +KSL  VP   D V+   LI  + K GN+ + + L+ EM++  I
Sbjct: 590 KGGHLIAA-----EKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P  FT +SLI GL + G+   A+ F  E   +   G   PN V+Y   +  +   GQ  
Sbjct: 645 LPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR---GNLVPNKVMYTCFVDGMFKAGQWK 701

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                   M    L  D  T   M+ G  R  ++     LL +M      P+     +++
Sbjct: 702 AGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILL 761

Query: 551 RGYQENGDLKSAF 563
            GY +   + ++F
Sbjct: 762 HGYSKRKHVSTSF 774



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 247/560 (44%), Gaps = 43/560 (7%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
            N  ++STLI     MG ++E + +Y  + +    P     N L+  L K GK     EF 
Sbjct: 472  NGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
              M   G++ + V++  LI+     G+ +KA ++FDEM   G  PT   Y  L+ GLC  
Sbjct: 532  RCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 168  NKMVEAE-----------------------------------SMFRSMRECGVVPNLYTY 192
              ++ AE                                   S+F  M +  ++P+ +TY
Sbjct: 592  GHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTY 651

Query: 193  NALMDGYCKVADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
             +L+ G C+      A+ F  E     NL PN V +   +DG+ K G+ +A   F   M 
Sbjct: 652  TSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMD 711

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
            K G+  ++   N +IDG+ + G + +   L  EM      P++ TYNIL+ G      + 
Sbjct: 712  KLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVS 771

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             +  L + M   GIL + +T  S+I G C+   +E  L +      +GVE +  TF+ LI
Sbjct: 772  TSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLI 831

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
               C  G I+ A  +   M    +  D     A++  L+++   +E+  +  EM +  I+
Sbjct: 832  SKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P       L++GL + G I  A   F+ K +      C PN V  +A+++AL   G+  +
Sbjct: 892  PESRKYIGLLNGLCRVGDIKTA---FVVKEEMIAHKICPPN-VAESAMVRALAKCGKADE 947

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            AS L   M    L P   ++TT++    +   + + + L   M   G+  D V   V++ 
Sbjct: 948  ASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 552  GYQENGDLKSAFRCSEFLKE 571
            G    GD+  AF   E +K 
Sbjct: 1008 GLCAKGDMAIAFELFEEMKR 1027



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 252/544 (46%), Gaps = 18/544 (3%)

Query: 36   YSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNAL 90
            +SVF+ +  +     +P+ F+  +L+    + GH+  A    + ++ +PA      CN L
Sbjct: 563  FSVFDEMTKV---GHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTL 619

Query: 91   LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG- 149
            +  + K G  D     + EMV   ++ D  TY  LI   C +G  + A+    E   +G 
Sbjct: 620  ITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 150  IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            + P  V+YT  + G+    +        + M + G+  ++ T NA++DGY ++  + +  
Sbjct: 680  LVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTH 739

Query: 210  EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            +   EM + N  PN+ T+ +L+ G  K   +  +   +  M   G+ P+      +I G 
Sbjct: 740  DLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGI 799

Query: 270  CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            C++  L   + +        +  D  T+N+LI   C  G++  A  ++  M   GI  + 
Sbjct: 800  CESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDK 859

Query: 330  VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             T ++++    +    +++  V  +M+++G+ P    +  L++G C+ G+I  A  +  E
Sbjct: 860  NTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEE 919

Query: 390  MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
            M+   + P  V  +A++  L+K G   E   L + ML+ K+ P++ + ++L+H   KNG 
Sbjct: 920  MIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGN 979

Query: 450  ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
            ++ AL     +   ++ G    + V Y  +I  LC  G +  A +LF +M+ D    +  
Sbjct: 980  VTEALEL---RVVMSNCGL-KLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVT 1035

Query: 510  TYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE---NGDLKSAFRC 565
            TY  ++ G+L +        ++L D++  G +     N  M+   Q+   N  LK  F C
Sbjct: 1036 TYKALVGGILSQGTEFSGTDIILKDLLARGFITAMSFNH-MINFPQQISVNAYLKHLFHC 1094

Query: 566  SEFL 569
            S  +
Sbjct: 1095 STMI 1098



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 200/415 (48%), Gaps = 12/415 (2%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++  + R C   P+++  + L+  Y +   +  +LE +  M  +   P+V T   ++  +
Sbjct: 111 ALMATYRLCNSNPSVF--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSI 168

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K  E  +  +F   M K  + P++  +N LI+  C  G+  ++  L  +MEK   +P +
Sbjct: 169 VKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN ++   C  G+ + A  LL  M  +G+ A+V TYN LI   C+     K   +   
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ + PN VT+++L++G    G +  A  L  EM+   L P+ V F ALIDG   +GN
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348

Query: 415 MKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            KE L+++  M+EAK +  +  +   L+ GL KN     A  F++        G C    
Sbjct: 349 FKEALKMF-HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRN---GVCV-GR 403

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  +I  LC +G + +A  + ++M  D + PD  TY+ ++ G  R  R+     ++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           + ++G+ P+ +I   ++      G LK   R    + E+ I    T  H T + L
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKETIR----IYEAMILEGNTPDHFTFNVL 514


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 161/446 (36%), Positives = 241/446 (54%), Gaps = 15/446 (3%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK    P     NALL+GL   G+       YE M+  G   DVVTY  L+   C  G++
Sbjct: 2   RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL +FD  + +G  P VV Y  LI+G C  +K+ EA+ + + M    +VP++ TYN+L
Sbjct: 62  DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA---AGNFFVHMAK 252
           ++G CK   V+ A      ++     PNV+T+  L+ GLC+  ELR    A   F  + K
Sbjct: 122 VNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLK 176

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P +  YN LIDG  K   + EA  L S + K  + PD  TY + I GLC  G++E 
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +L+ M ++G + +VV++N++I+G CKE  +++A  + S M  KG  PN ++F++LI 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK---DGNMKETLRLYKEMLEAK 429
           GQC+AG    AM  + EM+ + + P VV +  L+DGL K   +G +KE + L+  M+E  
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P V T S+LI GL K G++ +A         K     C PN   Y ++I  LC   ++
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG----CIPNVYTYNSLISGLCGLEKV 412

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTML 515
            +A +LF  M      PD  TY T++
Sbjct: 413 DEALELFVAMVEKGCVPDTITYGTII 438



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/435 (33%), Positives = 226/435 (51%), Gaps = 11/435 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   + +TY  L+   C  G +  A  L++ MI  G  P VV Y  L+HG C   ++ EA
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F    + G VP++ TYNAL++G+CK   ++ A      M+  NL P+VVT+  L++G
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA-GNLFEAMSLCSEMEKFEISP 292
           LCK G +  A    V     G  PN+  Y+ LI G C+    + EA+ L   + K    P
Sbjct: 125 LCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TYNILI GL    ++  A  L   + K G+  + +TY   IDG CK G +E AL + 
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M EKG  P+VV+ +++I+G CK   +D A  L + M  K   P+ + F  LI G  + 
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK---NGRISNALNFFLEKTDKTDGGYC 469
           G  K+ +  +KEML+  + P+V T + L+ GL K    GRI  A+  F    +K      
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR---- 357

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y+A+I  L   G++  A +L   M +    P+  TY +++ GL   +++ + + 
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 530 LLADMIKMGIVPDAV 544
           L   M++ G VPD +
Sbjct: 418 LFVAMVEKGCVPDTI 432



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/389 (34%), Positives = 203/389 (52%), Gaps = 11/389 (2%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR+ G  PN  TYNAL+ G C    ++ A   Y  M+     P+VVT+  L+ G CKVGE
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F    K G  P++  YN LI+G CKA  L EA  +   M    + PDV TYN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE-GDMEKALSVCSQMTEK 358
           L+ GLC  G+++ A  L+     +G   NV+TY++LI G C+E   + +AL +   + ++
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G EP V T++ LIDG  K   ++ A  L++ +V   L PD + +T  IDGL K G +++ 
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L + K+M E    P V + +++I+GL K  R+  A         K     CSPN + +  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG----CSPNAISFNT 293

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK---RMLDVMMLLADMI 535
           +I   C  G+  KA   F +M    ++P   TY  ++ GL +A+   R+ + + L   MI
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G VPD V    ++ G  + G L  A R
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARR 382


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 249/473 (52%), Gaps = 11/473 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I  C +L+ G  + GK        E +   G V DV+TY VLI   C  G++  AL 
Sbjct: 89  IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 148

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSM-RECGVVPNLYTYNALMDG 198
           + D M    + P VV Y  ++  LC+  K+ +A E + R + +EC   P++ TY  L++ 
Sbjct: 149 VLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC--YPDVITYTILIEA 203

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK + V +A++   EM +   +P+VVT+ VL++G+CK G L  A  F  +M  +G  PN
Sbjct: 204 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 263

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +N ++   C  G   +A  L S+M +   SP V T+NILI  LC  G L  A  +L+
Sbjct: 264 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 323

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM   G   N ++YN L+ G+CKE  M++A+     M  +G  P++VT+++L+   CK G
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A+ +  ++  K   P ++ +  +IDGLSK G  +  ++L  EM    + P + T S
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SL+ GL + G++  A+ FF +     +G    PN + Y +I+  LC   Q  +A    + 
Sbjct: 444 SLVSGLSREGKVDEAIKFFHD----LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           M S   +P   TYT ++ G+       + + LL ++   G+V  +   QV V+
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 206/406 (50%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ LI  + + G I+ AL V  ++ V P +   N +L  L   GK     E  +  +  
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C +  V +A+ L DEM +KG +P VV Y +LI+G+C E ++ EA
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                +M   G  PN+ T+N ++   C       A +   +ML     P+VVTF +L++ 
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L  A +    M   G  PN   YN L+ G CK   +  A+     M      PD
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+  LC  G+++ A  +L ++  +G    ++TYN++IDG  K G  E+A+ +  
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+SSL+ G  + G +D A+  + ++    + P+ + + +++ GL K  
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                +     M+  +  P+  T + LI G+   G    AL+   E
Sbjct: 489 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 204/391 (52%), Gaps = 5/391 (1%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           NAL  L+     P V  ++T++    + G +++A+ V  +    E  P +     L+   
Sbjct: 145 NALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 204

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K+       +  +EM   G   DVVTY VLI+  C +G + +A+   + M   G +P V
Sbjct: 205 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 264

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           + + I++  +C+  + ++AE +   M   G  P++ T+N L++  C+   + RA++   +
Sbjct: 265 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 324

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  H   PN +++  L+ G CK  ++  A  +   M   G +P+I  YN L+   CK G 
Sbjct: 325 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+ + +++     SP + TYN +I GL  VG+ E A  LL +M ++G+  +++TY+S
Sbjct: 385 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+ G  +EG +++A+     +   G+ PN +T++S++ G CK+   D A+     M+ K 
Sbjct: 445 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 504

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             P    +T LI+G++ +G  KE L L  E+
Sbjct: 505 CKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 199/399 (49%), Gaps = 16/399 (4%)

Query: 172 EAESMFR---SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           E E  F+   SM   G +P++    +L+ G+C++    +A      +      P+V+T+ 
Sbjct: 72  ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 131

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           VL+ G CK GE+    N    + +  V P++  YN ++   C +G L +AM +     + 
Sbjct: 132 VLISGYCKSGEI---DNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 289 EISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E  PDV TY ILI+  C   GVGQ   A  LL +M  +G   +VVTYN LI+G CKEG +
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQ---AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A+   + M   G +PNV+T + ++   C  G    A  L ++M+ K   P VV F  L
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+ L + G +   + + ++M     TP+  + + L+HG  K  ++  A+ +     D   
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL----DIMV 361

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
              C P+ V Y  ++ ALC DG++  A ++ + + S    P   TY T++ GL +  +  
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             + LL +M + G+ PD +    +V G    G +  A +
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 5/150 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
           LN L     +P +  ++T+I   S++G  E A+ +    R+  + P I   ++L++GL +
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +GK D   +F+ ++   G+  + +TY  ++   C      +A++    MI K  +PT   
Sbjct: 452 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEAT 511

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVV 186
           YTILI G+  E    EA  +   +   G+V
Sbjct: 512 YTILIEGIAYEGLAKEALDLLNELCSRGLV 541


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/485 (31%), Positives = 254/485 (52%), Gaps = 9/485 (1%)

Query: 66  GHIEEALWVYRKI---EVLPAIQAC--NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           G ++EAL + R++   E  P   A   N ++ GL + GK     + ++EMV  G+  + +
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY  +ID     GD+     L D+M+  G +P VV Y +L+ GLC   +M E  ++   M
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
               ++P+ +TY+ L DG  +  D    L  + E L   +     T  +L++GLCK G++
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      +   G+ P   +YN LI+G+C+  +L  A S+  +M+   I PD  TYN L
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC +  +  AE L+ +M K G+  +V T+N+LID Y + G +EK  +V S M +KG+
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           + NV++F S++   CK G I  A+ +  +M+ K +VP+  V+ ++ID   + G  ++   
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L ++M  + ++ S+FT + L+ GL KN +I  A       T++       P+ V Y  II
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG----LRPDVVSYNTII 587

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A C  G   +A +L  +M   ++RP   TY  +L  L  A R+ D+  L   M+   + 
Sbjct: 588 SACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVE 647

Query: 541 PDAVI 545
           P + I
Sbjct: 648 PSSSI 652



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 235/493 (47%), Gaps = 9/493 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++ +CN LL  L+  G+   V   +  +V  G   D   +   +  C   GD+ +AL 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 141 LFDEM--IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           +   M   +    P    Y ++I GL    K  +A  +F  M + GV PN  TYN ++DG
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K  D+        +ML    +PNVVT+ VL+ GLC+ G +         M  + + P+
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            F Y+ L DG  + G+    +SL  E  K  +    +T +IL+ GLC  G++  AE +L+
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            +   G++     YN+LI+GYC+  D++ A S+  QM  + + P+ +T+++LI+G CK  
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            I  A  L  EM    + P V  F  LID   + G +++   +  +M +  I  +V +  
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++    KNG+I  A+    +   K       PN  +Y +II A    G   +A  L   
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKD----VVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M+S  +     TY  +L+GL +  ++ +   L+ ++   G+ PD V    ++      GD
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595

Query: 559 LKSAFRCSEFLKE 571
              A    E L+E
Sbjct: 596 TDRAL---ELLQE 605



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 179/345 (51%), Gaps = 6/345 (1%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C+ LLNGL K GK     +  E +V  GLV     Y  LI+  C   D+  A ++F++M 
Sbjct: 338 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK 397

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            + I P  + Y  LI+GLC    + EAE +   M + GV P++ T+N L+D Y +   + 
Sbjct: 398 SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +      +M    ++ NV++FG ++   CK G++  A      M    V PN  VYN +I
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           D + ++G   +A  L  +M+   +S  +FTYN+L+KGLC   Q++ AE L+  +  +G+ 
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VV+YN++I   C +GD ++AL +  +M +  + P + T+  L+     AG +     L
Sbjct: 578 PDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECL 637

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           Y  MV K++ P   ++    +  SK  ++K      KEM E  I 
Sbjct: 638 YQHMVHKNVEPSSSIYGTRCENESKVASLK------KEMSEKGIA 676



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 188/361 (52%), Gaps = 12/361 (3%)

Query: 222 PNVVTFGVLMDGLCKVG---ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           P++ +  +L++ L  VG   ++RAA   F  +   G  P+ F +N  +     AG+L EA
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAA---FGLLVAAGARPDTFAWNKAVQACVAAGDLDEA 177

Query: 279 MSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +++   M + E    PD F+YN++I GL   G+   A  +  +M   G+  N +TYN++I
Sbjct: 178 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ K GD+E    +  QM + G +PNVVT++ L+ G C+AG +D    L  EM   S++
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML 297

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   ++ L DGL++ G+ +  L L+ E L+  +    +T S L++GL K+G+++ A   
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            LE    T      P   +Y  +I   C    +  A  +F  M+S ++RPD+ TY  ++ 
Sbjct: 358 -LEMLVHTG---LVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
           GL + + + +   L+ +M K G+ P       ++  Y   G L+  F     +++  I S
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 577 S 577
           +
Sbjct: 474 N 474



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 151/311 (48%), Gaps = 9/311 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           ++++TLI  + ++  ++ A  ++ +++   + P     NAL+NGL K        +   E
Sbjct: 371 AIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVME 430

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+   V T+  LID     G + K   +  +M DKGI+  V+ +  ++   C   K
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA ++   M    VVPN   YN+++D Y +     +A     +M    +  ++ T+ +
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNL 550

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ GLCK  ++  A     ++   G+ P++  YN +I   C  G+   A+ L  EM K++
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I P + TY+ L+  L   G++   E L Q M    +  NV   +S+    C+  +  K  
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHM----VHKNVEPSSSIYGTRCE--NESKVA 664

Query: 350 SVCSQMTEKGV 360
           S+  +M+EKG+
Sbjct: 665 SLKKEMSEKGI 675


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/545 (28%), Positives = 269/545 (49%), Gaps = 39/545 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           +P ++   I   S+ G +E+A  ++  +    V P  +A  +L+ G  ++      +E  
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+    +V    TYG  +   C  GD+  A N+  EM   G  P VVIYT LI     +
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++  +A  + + MRE G+ P+ + YN+L+ G  K   ++ A  F  EM+ +  +P+  T+
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS------- 280
           G  + G  + GE  +A  +   M + GV PN  +   LI+ +CK G + EA S       
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 281 ----------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
                                       +  EM    I+PDVF+Y  LI G   +G ++ 
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +  +M + G+ +NV+ YN L+ G+C+ G++EKA  +  +M+ KG  PN VT+ ++ID
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+G++  A  L+ EM +K LVPD  V+T L+DG  +  +++  + ++ E  E     
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCAS 767

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S    ++LI+ +FK G+     +      D +   +  PN V Y  +I  LC +G +  A
Sbjct: 768 SSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAA 827

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +LF  M+  NL P   TYT++L G  +  R  ++  +  ++I  GI PD ++  V++  
Sbjct: 828 KELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINA 887

Query: 553 YQENG 557
           + + G
Sbjct: 888 FLKEG 892



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 259/535 (48%), Gaps = 30/535 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK-----IEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           +F  LI  + E G ++EA++V+       ++++P++  CN LL+ L+K+ + D  W+ Y+
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVM---------------------KALNLFDEMID 147
            MV   +V DV +Y +LI   C  G+V                      +AL L   M  
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KG+ P+   Y +LI GLC + ++ +A+S+   M   G+  +   Y+ L+DG  K  + + 
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A    HEM+ H    + + +   +  + K G +  A   F  M  FGV P    Y  LI+
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIE 393

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  +  N+ +   L  E++K  I    +TY   +KG+C  G L+GA  ++++M   G   
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVV Y +LI  + ++     A+ V  +M E+G+ P+   ++SLI G  KA  +D A    
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EMV     PD   + A I G  + G      +  KEMLE  + P+    + LI+   K 
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G++  A + F    ++   G    +   Y  ++  L  +G++  A ++F +MR   + PD
Sbjct: 574 GKVIEACSAFRSMVEQGILG----DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +Y T++ G  +   M     +  +M++ G+  + +I  +++ G+  +G+++ A
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKA 684



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 237/489 (48%), Gaps = 7/489 (1%)

Query: 67  HIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           +++EAL + + +    ++P+ Q+ N L++GL K+ + +       EM   GL AD V Y 
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID      +   A  L  EM+  G     ++Y   I  +  E  M +A+++F  M   
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITF 379

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           GV P    Y +L++G+ +  +V +  E   E+   N+  +  T+G  + G+C  G+L  A
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            N    M   G  PN+ +Y  LI    +     +A+ +  EM +  I+PD F YN LI G
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG 499

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           L    +++ A   L +M + G   +  TY + I GY + G+   A     +M E GV PN
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            V  + LI+  CK G +  A   +  MV + ++ D   +T L++GL K+G + +   ++ 
Sbjct: 560 KVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFH 619

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM    I P VF+  +LI G  K G +  A + F    D+      + N ++Y  ++   
Sbjct: 620 EMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF----DEMVQAGLTSNVIIYNMLLGGF 675

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+I KA +L  +M      P+  TY T++ G  ++  + +   L  +M   G+VPD+
Sbjct: 676 CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735

Query: 544 VINQVMVRG 552
            +   +V G
Sbjct: 736 FVYTTLVDG 744



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 242/510 (47%), Gaps = 48/510 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++TLI  F +     +A+ V +++    + P     N+L+ GL K  K D    F 
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV  G   D  TYG  I      G+   A     EM++ G+ P  V+ T LI+  C +
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K++EA S FRSM E G++ +  TY  LM+G  K   VN A E +HEM    + P+V ++
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+DG  K+G ++ A + F  M + G+  N+ +YN L+ G C++G + +A  L  EM  
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+  TY  +I G C  G L  A  L  +M  +G++ +   Y +L+DG C+  D+E+
Sbjct: 694 KGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753

Query: 348 ALSVCSQMTEKGV---------------------------------------EPNVVTFS 368
           A+++  +  EKG                                        +PN VT++
Sbjct: 754 AITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYN 812

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            +ID  CK GN++AA  L+  M   +L+P V+ +T+L++G  K G   E   ++ E++ A
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872

Query: 429 KITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            I P     S +I+   K G  + A   L+    K    DG  C  +     A++     
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDG--CKLSISTCRALLSGFAK 930

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            G++  A K+  +M      PD+ T   ++
Sbjct: 931 VGEMEVAEKVVENMVRLKYIPDSSTVIELI 960



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 201/441 (45%), Gaps = 48/441 (10%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEA-LWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVW 104
           F P  F+    I  + E G    A  +V   +E  V+P    C  L+N   KKGK     
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +  MV  G++ D  TY VL++     G V  A  +F EM  KGI P V  Y  LI G 
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                M +A S+F  M + G+  N+  YN L+ G+C+  ++ +A E   EM      PN 
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNA 700

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  ++DG CK G+L  A   F  M   G+ P+ FVY  L+DG C+  ++  A+++   
Sbjct: 701 VTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET 760

Query: 285 MEK----------------FEI----------------------SPDVFTYNILIKGLCG 306
            EK                F+                        P+  TYNI+I  LC 
Sbjct: 761 NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCK 820

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G LE A+ L   M K  ++  V+TY SL++GY K G   +  SV  ++   G+EP+ + 
Sbjct: 821 EGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM 880

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD-----VVVFTALIDGLSKDGNMKETLRL 421
           +S +I+   K G    A+ L  +M  K+ V D     +    AL+ G +K G M+   ++
Sbjct: 881 YSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 940

Query: 422 YKEMLEAKITPSVFTVSSLIH 442
            + M+  K  P   TV  LI+
Sbjct: 941 VENMVRLKYIPDSSTVIELIN 961



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 169/393 (43%), Gaps = 54/393 (13%)

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMA--KFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           V+ FG+L+DG  + G L  A   F         + P++   N L+D   K   L     +
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE------------------ 323
              M +  +  DV +Y +LI   C  G ++ A+ +L K  +E                  
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 324 ---GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G++ +  +YN LIDG CK+  +E A S+  +M   G+  + V +S LIDG  K  N 
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           DAA GL  EMV      D +++   I  +SK+G M++   L+  M+   +TP     +SL
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 441 IHGLFKNGRISNALNFFLEKTDKT---------------------DGGY----------C 469
           I G F+   +       +E   +                      DG Y          C
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN V+Y  +I+      +   A ++  +MR   + PD   Y +++ GL +AK+M +   
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L +M++ G  PDA      + GY E G+  SA
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 133/338 (39%), Gaps = 85/338 (25%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS  TLI  FS++G++++A  ++ ++    +   +   N LL G  + G+ +   E 
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   G   + VTY  +ID  C  GD+ +A  LFDEM  KG+ P   +YT L+ G C 
Sbjct: 688 LDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747

Query: 167 ENKMVEAESMFRSMRECGVV---------------------------------------P 187
            N +  A ++F +  E G                                         P
Sbjct: 748 LNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKP 806

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N  TYN ++D  CK  ++  A E +H M   NL P V+T+  L++G  K+G      + F
Sbjct: 807 NDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVF 866

Query: 248 VHMAKFGVFPNIFVYNCLID---------------------------------------- 267
             +   G+ P+  +Y+ +I+                                        
Sbjct: 867 DEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS 926

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           G  K G +  A  +   M + +  PD  T   LI   C
Sbjct: 927 GFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 114/293 (38%), Gaps = 62/293 (21%)

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQ---------------------------------- 354
           V+ +  LIDGY ++G +++A+ V S                                   
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 355 ---MTEKGVEPNVVTFSSLIDGQCKAG---------------------NIDAAMGLYTEM 390
              M E+ V  +V ++  LI   C+ G                     N+D A+ L   M
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K LVP    +  LIDGL K   +++   L  EM    +       S LI GL K GR 
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLK-GRN 330

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           ++A N  + +      G+ S + ++Y   I  +  +G + KA  LF  M +  + P    
Sbjct: 331 ADAANGLVHEM--VSHGF-SIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARA 387

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           Y +++ G  R K +     LL ++ K  IV         V+G   +GDL  A+
Sbjct: 388 YASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I    + G++E A  ++   +K  ++P +    +LLNG  K G+   ++ 
Sbjct: 805 KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFS 864

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-----IDKGIEPTVVIYTIL 160
            ++E++  G+  D + Y V+I+    +G   KAL L D+M     +D G + ++     L
Sbjct: 865 VFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRAL 924

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + G     +M  AE +  +M     +P+  T   L++  C
Sbjct: 925 LSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 250/489 (51%), Gaps = 11/489 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +   N L+  L  +G          +M   G   + VTY  L+   C  G+V +A 
Sbjct: 153 VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAE 212

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L D M + G++P +V +  +++G+C   +M +A  +F  M + G+ P+  +YN L+ GY
Sbjct: 213 RLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGY 272

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CKV   + AL  + EM    + P+VVTF  L+  +CK G L  A      M + G+  N 
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +  LIDG CK G L +A+    EM +  I P V  YN LI G C VG+++ A  L+++
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G+  +VVTY++++  YCK GD   A  +  QM E GV P+ +T+SSLI   C+   
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A  L+  M+   L PD V +T+LIDG  K+GN++  L L+ EM++A + P V T S 
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512

Query: 440 LIHGLFKNGRISNA----LNFFLEKTDKTDGGY-----CSPNHVLYA--AIIQALCYDGQ 488
           LI+GL K+ R   A       + E+    +  Y     C  N  L +  A+++  C  G 
Sbjct: 513 LINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGL 572

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A K++  +   N   D   Y+ ++ G  R   ++  +     M++ G  P++     
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTIS 632

Query: 549 MVRGYQENG 557
           ++RG  E G
Sbjct: 633 LIRGLFEKG 641



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 147/426 (34%), Positives = 230/426 (53%), Gaps = 5/426 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A   FD M+  G+ P V  Y IL+  LC      EA S+ R MR  G  PN  TYN L+ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+  +V+RA      M    L+PN+VTF  +++G+CK G +  A   F  M K G+ P
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   YN L+ G+CK G   EA+S+ +EM +  I PDV T+  LI  +C  G LE A GL+
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M + G+  N +T+ +LIDG+CK+G ++ AL    +M +  ++P+VV +++LI+G C  
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  L  EM  K + PDVV ++ ++    K+G+     +L ++MLE  + P   T 
Sbjct: 381 GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI  L +  R+ +A   F  K   + G    P+ V Y ++I   C +G + +A  L  
Sbjct: 441 SSLIRVLCEEKRLGDAHVLF--KNMISLG--LQPDEVTYTSLIDGHCKEGNVERALSLHD 496

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    + PD  TY+ ++ GL ++ R  +   LL  +     VP  +    ++R  + N 
Sbjct: 497 EMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCR-NA 555

Query: 558 DLKSAF 563
           +LKS  
Sbjct: 556 ELKSVL 561



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/416 (33%), Positives = 224/416 (53%), Gaps = 5/416 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P+V+ Y  ++  L ++  +  A   F SM   GV PN+YTYN L+   C       A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L    +M      PN VT+  L+   C+ GE+  A      M + G+ PN+  +N +++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A  +  EM K  ++PD  +YN L+ G C VG    A  +  +M ++GI+ +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVT+ SLI   CK G++E+A+ +  +M E+G++ N +TF++LIDG CK G +D A+    
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM    + P VV + ALI+G    G M E   L +EM    + P V T S+++    KNG
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
              +A  F L +    +G    P+ + Y+++I+ LC + ++  A  LF +M S  L+PD 
Sbjct: 417 DTHSA--FQLNQQMLENG--VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            TYT+++ G  +   +   + L  +M+K G++PD V   V++ G  ++   K A R
Sbjct: 473 VTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 228/456 (50%), Gaps = 53/456 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+ AF   G ++ A   + + R+  + P +   N+++NG+ K G+ +   + +
Sbjct: 191 NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  GL  D V+Y  L+   C  G   +AL++F EM  KGI P VV +T LIH +C  
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKA 310

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  + R MRE G+  N  T+ AL+DG+CK   ++ AL    EM    +QP+VV +
Sbjct: 311 GNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCY 370

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C VG +  A      M   GV P++  Y+ ++  +CK G+   A  L  +M +
Sbjct: 371 NALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLE 430

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  TY+ LI+ LC   +L  A  L + M   G+  + VTY SLIDG+CKEG++E+
Sbjct: 431 NGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVER 490

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP---------- 397
           ALS+  +M + GV P+VVT+S LI+G  K+     A  L  ++  +  VP          
Sbjct: 491 ALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550

Query: 398 ----------------------------------------DVVVFTALIDGLSKDGNMKE 417
                                                   D  V++ LI G  ++GN+ +
Sbjct: 551 CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMK 610

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  +K+ML+    P+  +  SLI GLF+ G +  A
Sbjct: 611 ALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEA 646



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 208/421 (49%), Gaps = 18/421 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  + ++G   EAL V+ ++    ++P +    +L++ + K G  +       EM 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + +T+  LID  C +G +  AL    EM    I+P+VV Y  LI+G C   +M 
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  + R M   GV P++ TY+ ++  YCK  D + A +   +ML + + P+ +T+  L+
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LC+   L  A   F +M   G+ P+   Y  LIDGHCK GN+  A+SL  EM K  + 
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------------I 336
           PDV TY++LI GL    + + A+ LL K+Y E  +   + Y++L               +
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALL 564

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G+C +G M +A  V   + ++    +   +S LI G C+ GN+  A+  + +M+     
Sbjct: 565 KGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFA 624

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+     +LI GL + G + E  ++ +++L            +LI    K G +   L+ 
Sbjct: 625 PNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDV 684

Query: 457 F 457
            
Sbjct: 685 L 685



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 168/321 (52%), Gaps = 5/321 (1%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  YN ++     A +L  A      M    ++P+V+TYNIL++ LCG G  + A
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L+ M   G   N VTYN+L+  +C+ G++++A  +   M E G++PN+VTF+S+++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CKAG ++ A  ++ EMV + L PD V +  L+ G  K G   E L ++ EM    I P 
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T +SLIH + K G +  A+    E  ++        N + + A+I   C  G +  A 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERG----LQMNEITFTALIDGFCKKGFLDDAL 352

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
               +MR   ++P    Y  ++ G     RM +   L+ +M   G+ PD V    ++  Y
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            +NGD  SAF+ ++ + E+ +
Sbjct: 413 CKNGDTHSAFQLNQQMLENGV 433



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 5/254 (1%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   +V+ YN+++     +  +  A      M   GV PNV T++ L+   C  G+   A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + +  +M      P+ V +  L+    + G +    RL   M E  + P++ T +S+++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           + K GR+ +A   F E   +      +P+ V Y  ++   C  G   +A  +F++M    
Sbjct: 237 ICKAGRMEDARKVFDEMVKEG----LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + PD  T+T+++  + +A  +   + L+ +M + G+  + +    ++ G+ + G L  A 
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352

Query: 564 RCSEFLKESRIGSS 577
                +++ RI  S
Sbjct: 353 LAVREMRQCRIQPS 366



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+V+ +++++     A ++ +A   +  M+   + P+V  +  L+  L   G+ KE 
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L + ++M  A   P+  T ++L+    + G +  A        D    G   PN V + +
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL----VDMMREGGLKPNLVTFNS 232

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  +C  G++  A K+F +M  + L PD  +Y T++ G  +     + + + A+M + G
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           I+PD V    ++    + G+L+ A      ++E  +  +E
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 18/188 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPA-------IQACN--------ALLNGLI 95
            +S LI   S+    +EA  +  K+   E +PA       ++ C         ALL G  
Sbjct: 509 TYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFC 568

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            KG  +   + Y+ ++      D   Y VLI   C +G+VMKAL+   +M+  G  P   
Sbjct: 569 MKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNST 628

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
               LI GL  +  +VEA+ + + +  C  + +     AL+D   K  +V+  L+  H M
Sbjct: 629 STISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGM 688

Query: 216 LHHNLQPN 223
               L P+
Sbjct: 689 ARDGLLPS 696


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 249/473 (52%), Gaps = 11/473 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I AC +L+ GL K GK        E +   G V DV+TY VLI   C  G++  AL 
Sbjct: 142 IPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQ 201

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSM-RECGVVPNLYTYNALMDG 198
           L D M    + P VV Y  ++  LC+  K+ EA E + R M REC   P++ TY  L++ 
Sbjct: 202 LLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQREC--YPDVITYTILIEA 256

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK + V +A++   EM     +P+VVT+ VL++G+CK G L  A  F  HM  +G  PN
Sbjct: 257 TCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN 316

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +N ++   C  G   +A    +EM +   SP V T+NILI  LC  G +  A  +L+
Sbjct: 317 VITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM + G   N ++YN L+   CK+  ME+A+     M  +G  P++VT+++L+   CK G
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A+ +  ++  K   P ++ +  +IDGLSK G   + ++L  EM    + P + T S
Sbjct: 437 KVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +L+ GL + G++  A+ FF    D  + G   PN + Y +I+  LC   Q ++A    + 
Sbjct: 497 TLVGGLSREGKVDEAIAFF---HDLEEMG-VKPNAITYNSIMLGLCKARQTVRAIDFLAY 552

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           M +   +P   +Y  ++ GL       + + LL ++   G+V  +   QV+V+
Sbjct: 553 MVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 234/447 (52%), Gaps = 10/447 (2%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           ++LI    + G   +A  V   +E    +P +   N L++G  K G+  S  +  + M  
Sbjct: 149 TSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM-- 206

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +  DVVTY  ++   C  G + +A+ + D  + +   P V+ YTILI   C E+ + +
Sbjct: 207 -SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQ 265

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +   MR+ G  P++ TYN L++G CK   ++ A+ F + M  +  QPNV+T  +++ 
Sbjct: 266 AMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            +C  G    A  F   M + G  P++  +N LI+  C+ G +  A+ +  +M +   +P
Sbjct: 326 SMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTP 385

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  +YN L+  LC   ++E A   L  M   G   ++VTYN+L+   CK+G ++ A+ + 
Sbjct: 386 NSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           +Q+  KG  P ++T++++IDG  K G  D A+ L  EM  K L PD++ ++ L+ GLS++
Sbjct: 446 NQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSRE 505

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E +  + ++ E  + P+  T +S++ GL K  +   A++F      +     C P 
Sbjct: 506 GKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG----CKPT 561

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDM 499
              Y  +I+ L Y+G   +A +L +++
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 213/420 (50%), Gaps = 8/420 (1%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G++ +     ++M+ +G  P ++  T LI GLC   K  +A  +   + + G VP++ T
Sbjct: 123 NGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YN L+ GYCK  ++  AL+    M   ++ P+VVT+  ++  LC  G+L+ A        
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +   +P++  Y  LI+  CK   + +AM L  EM      PDV TYN+LI G+C  G+L+
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A   L  M   G   NV+T+N ++   C  G    A    ++M  KG  P+VVTF+ LI
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +  C+ G I  A+ +  +M      P+ + +  L+  L KD  M+  +     M+     
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY 419

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P + T ++L+  L K+G++  A+    +   K     CSP  + Y  +I  L   G+   
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG----CSPVLITYNTVIDGLSKVGKTDD 475

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI-NQVMV 550
           A KL  +M+   L+PD  TY+T++ GL R  ++ + +    D+ +MG+ P+A+  N +M+
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML 535



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ LI  + + G I  AL +  ++ V P +   N +L  L   GK     E  +  +  
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR 241

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C +  V +A+ L DEM DKG +P VV Y +LI+G+C E ++ EA
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 M   G  PN+ T+N ++   C       A +F  EM+     P+VVTF +L++ 
Sbjct: 302 IRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINF 361

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G +  A +    M + G  PN   YN L+   CK   +  A+     M      PD
Sbjct: 362 LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPD 421

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+  LC  G+++ A  +L ++  +G    ++TYN++IDG  K G  + A+ +  
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+S+L+ G  + G +D A+  + ++    + P+ + + +++ GL K  
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                +     M+     P+  +   LI GL   G    AL    E
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 13/383 (3%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G +P++    +L+ G CK     +A      +      P+V+T+ VL+ G CK GE+ +A
Sbjct: 140 GDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSA 199

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M+   V P++  YN ++   C +G L EAM +     + E  PDV TY ILI+ 
Sbjct: 200 LQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEA 256

Query: 304 LC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
            C   GVGQ   A  LL +M  +G   +VVTYN LI+G CKEG +++A+   + M   G 
Sbjct: 257 TCKESGVGQ---AMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGC 313

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +PNV+T + ++   C  G    A     EM+ K   P VV F  LI+ L + G +   + 
Sbjct: 314 QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAID 373

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           + ++M +   TP+  + + L+H L K+ ++  A+ +     D      C P+ V Y  ++
Sbjct: 374 VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL----DIMVSRGCYPDIVTYNTLL 429

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            ALC DG++  A ++ + + S    P   TY T++ GL +  +  D + LL +M   G+ 
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489

Query: 541 PDAVINQVMVRGYQENGDLKSAF 563
           PD +    +V G    G +  A 
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAI 512



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 158/329 (48%), Gaps = 7/329 (2%)

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L + GEL     F   M   G  P+I     LI G CK G  ++A  +   +E     PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TYN+LI G C  G++  A  LL +M    +  +VVTYN+++   C  G +++A+ V  
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +  ++   P+V+T++ LI+  CK   +  AM L  EM  K   PDVV +  LI+G+ K+G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + E +R    M      P+V T + ++  +   GR  +A  F  E   K     CSP+ 
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG----CSPSV 352

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I  LC  G I +A  +   M      P++ +Y  +L  L + K+M   +  L  
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           M+  G  PD V    ++    ++G +  A
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVA 441



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 10/242 (4%)

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V  N+ +    + G++E+       M  +G  P+++  +SLI G CK G    A  +   
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +     VPDV+ +  LI G  K G +   L+L   M    ++P V T ++++  L  +G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A    +E  D+     C P+ + Y  +I+A C +  + +A KL  +MR    +PD  
Sbjct: 228 LKEA----MEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           TY  ++ G+ +  R+ + +  L  M   G  P+ + + +++R     G    A    +FL
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA---EKFL 340

Query: 570 KE 571
            E
Sbjct: 341 AE 342



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STL+   S  G ++EA+  +  +E   V P     N+++ GL K  +     +F   M
Sbjct: 494 TYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYM 553

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           V  G      +Y +LI+    +G   +AL L +E+  +G+
Sbjct: 554 VARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/473 (32%), Positives = 254/473 (53%), Gaps = 9/473 (1%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            P+V  ++T++ +F + G ++EAL +    +K+  LP     N L+NGL   G+ +   E
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  GL     TY  LI   C +G + +A  L +EM+ +G  PT+V Y  +++GLC
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ +A  +   M    ++P+L +YN L+ GY ++ ++  A   + E+    L P+VV
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+DGLC++G+L  A      M K G  P++F +  L+ G CK GNL  A  L  EM
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD F Y   I G   +G    A G+ ++M   G   +++TYN  IDG  K G++
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M   G+ P+ VT++S+I     AG++  A  ++ EM+ K + P VV +T L
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I   +  G +K  +  + EM E  + P+V T ++LI+GL K  ++  A  FF E   K  
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG- 605

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               SPN   Y  +I   C  G   +A +L+ DM    ++PD+CT++ +L+ L
Sbjct: 606 ---ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 265/534 (49%), Gaps = 11/534 (2%)

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEFYEEMVLCGLVA 117
           +++   +E+ L V+ K+    +LP ++ CN +L  L  +    D   E Y  MV CG+  
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            VVTY  ++D  C QG V +AL L  +M   G  P  V Y +L++GL +  ++ +A+ + 
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           + M   G+  + YTY+ L+ GYC+   ++ A     EML     P +VT+  +M GLCK 
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A      M    + P++  YN LI G+ + GN+ EA  L +E+    + P V TY
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI GLC +G L+ A  L  +M K G   +V T+  L+ G+CK G++  A  +  +M  
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLN 428

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++P+   + + I G+ K G+   A G+  EM+ +   PD++ +   IDGL K GN+KE
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L K+ML   + P   T +S+IH     G +  A   FLE   K       P+ V Y 
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG----IFPSVVTYT 544

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I +    G++  A   F +M    + P+  TY  ++ GL + ++M        +M   
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           GI P+     +++      G  + A R  + + +  I   + +  T  + L HL
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI---QPDSCTHSALLKHL 655



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 5/123 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++ LI +++  G ++ A+  + ++    V P +   NAL+NGL K  K D  ++F
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G+  +  TY +LI+  C  G   +AL L+ +M+D+ I+P    ++ L+  L  
Sbjct: 598 FTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657

Query: 167 ENK 169
           + K
Sbjct: 658 DYK 660


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 271/507 (53%), Gaps = 11/507 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +S+    F     +++A+ ++ ++      P     N +L  L+K   + +V  
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++M   G+  ++V   +LI+C C  G +  A ++F +++  G  P  + +T LI GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ +A      +   G   +  +Y  L+ G CKV +   AL+    +  + +QPNVV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D +CKV  +  A + F  M   G+ P++  Y+ LI G C  G L +A+ L ++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I PDV+T+NIL+   C  G+++  + +   M K+GI  N VTYNSL+DGYC   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA S+ + M + GV P++ ++S +I+G CK    D AM L+ EM  K+++PDVV +++L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDGLSK G +   L+L  +M +  + P++ T +S++  L K  ++  A+    +  DK  
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG- 465

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKR 523
                PN   Y+ +I+ LC  G++  A K+F  +  +  NL  D  TYT M++G      
Sbjct: 466 ---IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVD--TYTIMIQGFCVEGL 520

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMV 550
             + + LL+ M   G +PDA   ++++
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIII 547



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 263/488 (53%), Gaps = 13/488 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI--- 78
           +L+KS+  H V Y        +E     P++ +   LI  F ++G I  A  V+ KI   
Sbjct: 94  SLVKSKHYHTVLY----LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM 149

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
             +P       L+ GL  KG+    + F++++V  G   D ++YG LI   C  G+   A
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+L   +    ++P VV+Y  +I  +C    + EA  +F  M   G+ P++ TY+AL+ G
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISG 269

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C +  +N A++ +++M+  N++P+V TF +L++  CK G+++     F  M K G+ PN
Sbjct: 270 FCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              YN L+DG+C    + +A S+ + M +  ++PD+ +Y+I+I G C + + + A  L +
Sbjct: 330 FVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M+++ I+ +VVTY+SLIDG  K G +  AL +  QM ++GV P + T++S++D  CK  
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH 449

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A+ L T++  K + P++  ++ LI GL + G +++  ++++ +L      +V T +
Sbjct: 450 QVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYT 509

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +I G    G  + AL        K +   C P+   Y  II +L    +   A KL  +
Sbjct: 510 IMIQGFCVEGLFNEALALL----SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565

Query: 499 MRSDNLRP 506
           M +  +RP
Sbjct: 566 MIARGVRP 573



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 226/415 (54%), Gaps = 4/415 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L L  +M  +GI+P +V   ILI+  C    +  A S+F  + + G VP+  T+  L+ G
Sbjct: 105 LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKG 164

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C    + +A  F+ +++      + +++G L+ GLCKVGE RAA +    +    V PN
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +YN +ID  CK   + EA  L SEM    ISPDV TY+ LI G C +G+L  A  L  
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM  E I  +V T+N L++ +CK+G M++  +V   M ++G++PN VT++SL+DG C   
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ++ A  ++  M    + PD+  ++ +I+G  K     E + L+KEM    I P V T S
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SLI GL K+GRIS AL    +  D+       P    Y +I+ ALC   Q+ KA  L + 
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRG----VPPTIRTYNSILDALCKIHQVDKAIALLTK 460

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++   ++P+  TY+ +++GL ++ ++ D   +   ++  G   +     +M++G+
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 177/390 (45%), Gaps = 73/390 (18%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+   + TLI    ++G    AL + ++++   V P +   N +++ + K    +  ++ 
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM+  G+  DVVTY  LI   C  G +  A++LF++MI + I+P V  + IL++  C 
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA------------------ 208
           + KM E +++F  M + G+ PN  TYN+LMDGYC V +VN+A                  
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 209 -----------------LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
                            +  + EM   N+ P+VVT+  L+DGL K G +  A      M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL----------- 300
             GV P I  YN ++D  CK   + +A++L ++++   I P+++TY+IL           
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487

Query: 301 ------------------------IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
                                   I+G C  G    A  LL KM   G + +  TY  +I
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
               K+ + + A  +  +M  +GV P  + 
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGVRPRQIA 577


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 182/538 (33%), Positives = 270/538 (50%), Gaps = 12/538 (2%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           VF  +N+    KF P++  ++T++++ S+   I+E   VY ++   ++ P I   NA++N
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  K G       +  ++V  GL  D  TY  LI   C    V  A  +F  M  KG + 
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V YT LIHGLC   ++ EA  +F  M E    P + TY  L+           AL  +
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           +EM     +PNV T+ VL+DGLCK  ++  A      M++ G+ P++  YN LIDG+CK 
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE 382

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + +A  +   ME     P+  TYN LI GLC   ++  A  LL KM +  +  +++TY
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           NSLI G CK  D+E A  + S M E G+ P+  T+S  ID  CK G ++ A  L+  +  
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K +  + V++TALIDG  K G +     L + ML     P+ +T + LI GL K  ++  
Sbjct: 503 KGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKE 562

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A +   +    T G    P  V Y  +I  +  DG    A K+F+ M S   +PD CTYT
Sbjct: 563 ASSLVAKML--TMG--VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
             L        + +V  ++A M + GI+PD V   V++ GY   G    AF   +FLK
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF---DFLK 673



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 226/471 (47%), Gaps = 39/471 (8%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++GL + G+ +   + + +M        V TY VLI    G G  ++ALNLF+EM +KG
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            EP V  YT+LI GLC ENKM EA  M   M E G++P++ TYNAL+DGYCK   ++ A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E    M  ++  PN  T+  L+ GLCK  ++  A      M +  + P++  YN LI G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK  +L  A  L S M +  + PD +TY++ I  LC  G++E A  L   +  +G+ AN 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LIDGYCK G ++ A S+  +M      PN  T++ LI+G CK   +  A  L  +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+   + P VV +T LI  + KDG     L+++  M+     P V T ++ +H  F  G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG- 628

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
                   LE+ D                                + + M  + + PD  
Sbjct: 629 -------MLEEVD-------------------------------DVIAKMNEEGILPDLV 650

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           TYT ++ G  R          L  M+  G  P   I  ++++       +K
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 235/478 (49%), Gaps = 42/478 (8%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKG---IEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +I  CC   DV+  L +F +M   G    +PT+  Y  ++  L     + E ++++  + 
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              + PN+YT+NA+++GYCK+ +V  A  +  +++   L P+  T+  L+ G C+   + 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F+ M + G   N   Y  LI G C+AG + EA+ L ++M +    P V TY +LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             L G G+   A  L  +M ++G   NV TY  LIDG CKE  M++A  + S+M+EKG+ 
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VVT+++LIDG CK G ID A  +   M   S  P+   +  LI GL K   + + + L
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL 426

Query: 422 YKEMLEAKITPSVFTVSSLIHG-----------------------------------LFK 446
             +MLE K++PS+ T +SLIHG                                   L K
Sbjct: 427 LNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCK 486

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR+  A   F    D         N V+Y A+I   C  G+I  A  L   M +D   P
Sbjct: 487 EGRVEEAGTLF----DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           ++ TY  ++ GL + K+M +   L+A M+ MG+ P  V   +++    ++G    A +
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 242/531 (45%), Gaps = 52/531 (9%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A S  G   EAL ++ +++     P +     L++GL K+ K D   + 
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQG--------------------------------- 133
             EM   GL+  VVTY  LID  C +G                                 
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416

Query: 134 --DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
              V KA+ L ++M+++ + P+++ Y  LIHG C  N +  A  +   M E G+VP+ +T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y+  +D  CK   V  A   +  +    ++ N V +  L+DG CKVG++  A +    M 
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                PN + YN LI+G CK   + EA SL ++M    + P V TY ILI  +   G  +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +   M   G   +V TY + +  Y  +G +E+   V ++M E+G+ P++VT++ LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  + G    A      MV     P + + + LI  LS +  MKET        E  I 
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS------EIGID 710

Query: 432 PSVFTVSSL-IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            SV  V+S+ I  ++K      AL  F    +K     C+ +  +Y A+I   C   ++ 
Sbjct: 711 -SVSNVNSVDIADVWKTLEYEIALKLF----EKMVEHGCTIDVSIYGALIAGFCQQERLE 765

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           +A  L   M+   + P    Y ++L    +     + + L+  M++ G++P
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 186/388 (47%), Gaps = 7/388 (1%)

Query: 194 ALMDGYCKVADVNRALEFYHEML---HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           +++   C + DV   LE + +M        +P +  +  ++  L K   +      ++ +
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
               + PNI+ +N +++G+CK GN+ EA    S++ +  + PD FTY  LI G C    +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  +   M ++G   N V+Y +LI G C+ G + +AL + + MTE    P V T++ L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I     +G    A+ L+ EM  K   P+V  +T LIDGL K+  M E  ++  EM E  +
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            PSV T ++LI G  K G I +A        D  +   C PN   Y  +I  LC   ++ 
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEIL----DLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           KA  L + M    L P   TY +++ G  +   +     LL+ M + G+VPD     V +
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSE 578
               + G ++ A    + +K   + ++E
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANE 509



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 203/483 (42%), Gaps = 69/483 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    +   + +A+ +  K+   ++ P++   N+L++G  K    +S +   
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GLV D  TY V ID  C +G V +A  LFD +  KG++   VIYT LI G C  
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  A S+   M     +PN YTYN L++G CK   +  A     +ML   ++P VVT+
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------------- 254
            +L+  + K G    A   F HM   G                                 
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 255 --VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL-- 310
             + P++  Y  LIDG+ + G    A      M      P ++  +ILIK L    ++  
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 311 ---------------------------EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
                                      E A  L +KM + G   +V  Y +LI G+C++ 
Sbjct: 703 TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+A  +   M E+G+ P+   ++SL+D  CK G    A+ L   MV   L+P +  + 
Sbjct: 763 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 822

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS--NALNFFLEKT 461
            L+ GL  +G+ ++   ++  +L             LI GL K   +   + L   +E+ 
Sbjct: 823 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882

Query: 462 DKT 464
           D T
Sbjct: 883 DAT 885



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 9/386 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  +++ LI  + ++G I+ A  +  ++     LP     N L+ GL K+ K      
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M+  G+   VVTY +LI      G    AL +F+ M+  G +P V  YT  +H   
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           ++  + E + +   M E G++P+L TY  L+DGY ++   +RA +F   M+    +P++ 
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
              +L+  L     ++         ++ G+     V +  I    K      A+ L  +M
Sbjct: 686 IVSILIKNLSHENRMKET------RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKM 739

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +   + DV  Y  LI G C   +LE A+GL+  M + G+  +   YNSL+D  CK G  
Sbjct: 740 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 799

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+ +   M E G+ P + ++  L+ G    G+ + A  ++  ++      D V +  L
Sbjct: 800 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 859

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKIT 431
           IDGL K   + E   L   M E   T
Sbjct: 860 IDGLLKRDLVDECSELIDIMEEKDAT 885



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 167/351 (47%), Gaps = 29/351 (8%)

Query: 241 RAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           + A +FF  +A + G   N+  Y+ ++       N+     L    EK  IS        
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSML-------NILIRARLLGVAEKIRIS-------- 126

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEG---ILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +IK  C +  +     + +KM  +G       +  YN+++    K   +++  +V  ++ 
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
              + PN+ TF+++++G CK GN+  A    +++V   L PD   +T+LI G  ++  + 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
               ++  M +     +  + ++LIHGL + GRI+ AL  F + T+      C P    Y
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN----CCPTVRTY 302

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I AL   G+ ++A  LF++M+     P+  TYT ++ GL +  +M +   +L++M +
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
            G++P  V    ++ GY + G +  AF   + ++      S + G  TR++
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME------SNSCGPNTRTY 407


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/518 (30%), Positives = 262/518 (50%), Gaps = 26/518 (5%)

Query: 50   FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEF 106
            +N + ++ +I    ++G I EA  +   +E+    P + + + ++NG  + G+ D VW+ 
Sbjct: 667  WNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKL 726

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             E+M   GL  +  TYG +I   C    + +A   F EMI +GI P  ++YT L+ G C 
Sbjct: 727  IEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCK 786

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
               +  A   F  M    + P++ TY A++ G+C++ D+  A + +HEML   L+P+++T
Sbjct: 787  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            F  LM+G CK G ++ A     HM + G  PN+  Y  LIDG CK G+L  A  L  EM 
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            K  + P++FTYN ++ GLC  G +E A  L+ +    G+ A+ VTY +L+D YCK G+M+
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            KA  + ++M  KG++P +VTF+ L++G C  G ++    L   M+ K + P+   F  L+
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 407  DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                   N+K    +YK+M    + P   T  +L+ G      +  A   F E   K   
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK--- 1083

Query: 467  GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            G+ S +   Y+ +I+      + ++A ++F  MR D L  D              K + D
Sbjct: 1084 GF-SVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD--------------KEIFD 1128

Query: 527  VMMLLADMIKMGIVPDAVINQV--MVRGYQENGDLKSA 562
                 +D    G  PD +++ +  ++  Y  +  L+ A
Sbjct: 1129 ---FFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLREA 1163



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 260/510 (50%), Gaps = 14/510 (2%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEF 106
            +P VF        E G + EA  V+ K+    ++ ++ +CN  L  L K   K  +    
Sbjct: 597  DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + E    G+  +V +Y ++I   C  G + +A +L   M  KG  P V+ Y+ +I+G C 
Sbjct: 657  FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              ++ +   +   M++ G+ PN YTY +++   C++  +  A E + EM+   + P+ + 
Sbjct: 717  FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +  L+DG CK G++RAA  FF  M    + P++  Y  +I G C+ G++ EA  L  EM 
Sbjct: 777  YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               + PD+ T+  L+ G C  G ++ A  +   M + G   NVVTY +LIDG CKEGD++
Sbjct: 837  CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
             A  +  +M + G++PN+ T++S+++G CK+GNI+ A+ L  E     L  D V +T L+
Sbjct: 897  SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956

Query: 407  DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDK 463
            D   K G M +   +  EML   + P++ T + L++G   +G + +    LN+ L K   
Sbjct: 957  DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-- 1014

Query: 464  TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  +PN   +  +++  C    +  A+ ++ DM S  + PD  TY  +++G   A+ 
Sbjct: 1015 -----IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069

Query: 524  MLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            M +   L  +M   G         V+++G+
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 238/475 (50%), Gaps = 13/475 (2%)

Query: 94   LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI-----DCCCGQGDVMKALNLFDEMIDK 148
            L++ G      + +E+M+  GLV  V +  V +     DC         A+ +F E  + 
Sbjct: 608  LVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDC----NKTATAIIVFREFPEV 663

Query: 149  GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            G+   V  Y I+IH +C   ++ EA  +   M   G  P++ +Y+ +++GYC+  ++++ 
Sbjct: 664  GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723

Query: 209  LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
             +   +M    L+PN  T+G ++  LC++ +L  A   F  M   G+ P+  VY  L+DG
Sbjct: 724  WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783

Query: 269  HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
             CK G++  A     EM   +I+PDV TY  +I G C +G +  A  L  +M   G+  +
Sbjct: 784  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843

Query: 329  VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            ++T+  L++GYCK G ++ A  V + M + G  PNVVT+++LIDG CK G++D+A  L  
Sbjct: 844  IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903

Query: 389  EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            EM    L P++  + ++++GL K GN++E ++L  E   A +     T ++L+    K+G
Sbjct: 904  EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 963

Query: 449  RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
             +  A     E      G    P  V +  ++   C  G +    KL + M +  + P+ 
Sbjct: 964  EMDKAQEILTEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 509  CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             T+  +++       +     +  DM   G+ PD    + +V+G+    ++K A+
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 227/447 (50%), Gaps = 5/447 (1%)

Query: 117  ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE-NKMVEAES 175
            +D   + V        G + +A  +F++M++ G+  +V    + +  L  + NK   A  
Sbjct: 596  SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAII 655

Query: 176  MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            +FR   E GV  N+ +YN ++   C++  +N A      M      P+V+++  +++G C
Sbjct: 656  VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 236  KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
            + GEL         M + G+ PN + Y  +I   C+   L EA    SEM    I PD  
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 296  TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
             Y  L+ G C  G +  A     +M+   I  +V+TY ++I G+C+ GDM +A  +  +M
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 356  TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              +G+EP+++TF+ L++G CKAG+I  A  ++  M+     P+VV +T LIDGL K+G++
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 416  KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
                 L  EM +  + P++FT +S+++GL K+G I  A+    E     +    + + V 
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE----FEAAGLNADTVT 951

Query: 476  YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
            Y  ++ A C  G++ KA ++ ++M    L+P   T+  ++ G      + D   LL  M+
Sbjct: 952  YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011

Query: 536  KMGIVPDAVINQVMVRGYQENGDLKSA 562
              GI P+A     +V+ Y    +LK+A
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAA 1038



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 232/448 (51%), Gaps = 15/448 (3%)

Query: 139  LNLFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
            +  FD ++    D G +P V  + +    L     + EA  +F  M   G+V ++ + N 
Sbjct: 581  VQFFDLLVYTYKDWGSDPRV--FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNV 638

Query: 195  LMDGYCKVADVNR---ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
             +    K  D N+   A+  + E     +  NV ++ +++  +C++G +  A +  + M 
Sbjct: 639  YLARLSK--DCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLME 696

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              G  P++  Y+ +I+G+C+ G L +   L  +M++  + P+ +TY  +I  LC + +L 
Sbjct: 697  LKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLA 756

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             AE    +M  +GIL + + Y +L+DG+CK GD+  A     +M  + + P+V+T++++I
Sbjct: 757  EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
             G C+ G++  A  L+ EM+ + L PD++ FT L++G  K G++K+  R++  M++A  +
Sbjct: 817  SGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P+V T ++LI GL K G + +A N  L +  K       PN   Y +I+  LC  G I +
Sbjct: 877  PNVVTYTTLIDGLCKEGDLDSA-NELLHEMWKIG---LQPNIFTYNSIVNGLCKSGNIEE 932

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            A KL  +  +  L  D  TYTT++    ++  M     +L +M+  G+ P  V   V++ 
Sbjct: 933  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992

Query: 552  GYQENGDLKSAFRCSEFLKESRIGSSET 579
            G+  +G L+   +   ++    I  + T
Sbjct: 993  GFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/546 (29%), Positives = 269/546 (49%), Gaps = 26/546 (4%)

Query: 45  LEIPKFNPSVFSTLIIA----FSEMGH------------IEEALWVYRKI---EVLPAIQ 85
           L  P  +P  F T +++    FS + H            +++AL  + ++      P+  
Sbjct: 9   LTRPSSSPPGFGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTV 68

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
             N LL  + K  ++ +V+    +M   G+  DV T  +LI+  C       A ++  ++
Sbjct: 69  DFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKI 128

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  G++P    +T LI GLC E K+ +A  +F  M   G  PN+ TY  L++G CKV + 
Sbjct: 129 LKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 188

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N A+     M   N QP+VV +  ++D LCK  ++  A N F  M   G+ P+IF Y  L
Sbjct: 189 NAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSL 248

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I   C         +L ++M   +I PDV  ++ ++  LC  G++  A  ++  M   G+
Sbjct: 249 IHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 308

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVVTYN+L+DG+C + +M++A+ V   M   G  PNV+++++LI+G CK   +D A  
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 368

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM  K L+P+ V +  L+ GL   G +++ + L+ EM+     P + T   L+  L 
Sbjct: 369 LFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 428

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   +  A+          +G    P+  +Y  +I  +C  G++  A  +FS++ S  LR
Sbjct: 429 KKSHLDEAMALL----KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  TYT M+ GL R   + +   L  +M   G  PD      + +G  +N   K A R 
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRA 541

Query: 566 SEFLKE 571
            + L+E
Sbjct: 542 IQLLQE 547



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 264/512 (51%), Gaps = 12/512 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +   +S+ N ++S  IP   P V++   LI +F  +     A  V  KI  L   P  
Sbjct: 81  KQYPTVFSLSNQMDSFGIP---PDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDT 137

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L   
Sbjct: 138 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 197

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M     +P VV+YT +I  LC + ++ EA ++F  M   G+ P+++TY +L+   C + +
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   ++M++  + P+VV F  ++D LCK G++  A +    M   GV PN+  YN 
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M     +P+V +YN LI G C + +++ A  L ++M ++ 
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           ++ N VTYN+L+ G C  G ++ A+++  +M   G  P++ T+  L+D  CK  ++D AM
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L   +   ++ PD+ ++T +IDG+ + G ++    ++  +    + P+V T + +I+GL
Sbjct: 438 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            + G +  A   F+E     DG  CSP+   Y  I Q L  + + L+A +L  +M +   
Sbjct: 498 CRRGLLDEANKLFME----MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGF 553

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             D  T T ++  L   K    V  +L++ ++
Sbjct: 554 SADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/544 (29%), Positives = 270/544 (49%), Gaps = 39/544 (7%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P ++   I   S+ G +E+A  ++  +    ++P  QA  +L+ G  ++      +E   
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM    +V    TYG ++   C  GD+  A N+  EMI  G  P VVIYT LI      +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  +A  + + M+E G+ P+++ YN+L+ G  K   ++ A  F  EM+ + L+PN  T+G
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-------- 280
             + G  +  E  +A  +   M + GV PN  +   LI+ +CK   + EA S        
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ 586

Query: 281 ---------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
                                      +  EM    I+PDVF+Y +LI G   +G ++ A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  +M +EG+  NV+ YN L+ G+C+ G++EKA  +  +M+ KG+ PN VT+ ++IDG
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+G++  A  L+ EM +K LVPD  V+T L+DG  +  +++  + ++    +     S
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG-CASS 765

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
               ++LI+ +FK G+            D +   +  PN V Y  +I  LC +G +  A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF  M++ NL P   TYT++L G  +  R  ++  +  + I  GI PD ++  V++  +
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885

Query: 554 QENG 557
            + G
Sbjct: 886 LKEG 889



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/576 (28%), Positives = 262/576 (45%), Gaps = 63/576 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  L   +   G+IEEA++V+     +E++P +  C  LL+ L++  + D  W+ Y+ M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVM---------------------KALNLFDEMIDKG 149
           V   +V DV TY +LI   C  G+V                       AL L + MI KG
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P    Y +LI GLC   ++ +A+S+   M   GV  + +TY+ L+DG  K  + + A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              HEM+ H +      +   +  + K G +  A   F  M   G+ P    Y  LI+G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+  N+ +   L  EM+K  I    +TY  ++KG+C  G L+GA  ++++M   G   NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LI  + +      A+ V  +M E+G+ P++  ++SLI G  KA  +D A     E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS---------------- 433
           MV   L P+   + A I G  +        +  KEM E  + P+                
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572

Query: 434 -------------------VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
                                T + L++GLFKN ++ +A   F E      G   +P+  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE----MRGKGIAPDVF 628

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I      G + KAS +F +M  + L P+   Y  +L G  R+  +     LL +M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
              G+ P+AV    ++ GY ++GDL  AFR  + +K
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 234/483 (48%), Gaps = 4/483 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P     + L++GL K  + +       EM   G+  D  TY +LID      +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  EM+  GI     +Y   I  +  E  M +A+++F  M   G++P    Y +L++GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  +V +  E   EM   N+  +  T+G ++ G+C  G+L  A N    M   G  PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI    +     +AM +  EM++  I+PD+F YN LI GL    +++ A   L +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  N  TY + I GY +  +   A     +M E GV PN V  + LI+  CK   
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A   Y  MV + ++ D   +T L++GL K+  + +   +++EM    I P VF+   
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+G  K G +  A + F E  ++      +PN ++Y  ++   C  G+I KA +L  +M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEG----LTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L P+  TY T++ G  ++  + +   L  +M   G+VPD+ +   +V G     D+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 560 KSA 562
           + A
Sbjct: 749 ERA 751



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 249/476 (52%), Gaps = 15/476 (3%)

Query: 52  PSVF--STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P +F  ++LII  S+   ++EA  ++   +E  + P      A ++G I+  +F S  ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM  CG++ + V    LI+  C +  V++A + +  M+D+GI      YT+L++GL  
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +K+ +AE +FR MR  G+ P++++Y  L++G+ K+ ++ +A   + EM+   L PNV+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+ G C+ GE+  A      M+  G+ PN   Y  +IDG+CK+G+L EA  L  EM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD F Y  L+ G C +  +E A  +     K+G  ++   +N+LI+   K G  E
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 347 KALSVCSQMTEKGVE----PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
               V +++ +   +    PN VT++ +ID  CK GN++AA  L+ +M   +L+P V+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLE 459
           T+L++G  K G   E   ++ E + A I P     S +I+   K G  + AL   +    
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           K    DG  C  +     A++      G++  A K+  +M      PD+ T   ++
Sbjct: 904 KNAVDDG--CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 216/481 (44%), Gaps = 62/481 (12%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L+ AK    AR  + ++ EN LK   P+   Y  F                S  I A SE
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLK---PNAFTYGAF---------------ISGYIEA-SE 537

Query: 65  MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
               ++ +   R+  VLP    C  L+N   KK K       Y  MV  G++ D  TY V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L++       V  A  +F EM  KGI P V  Y +LI+G      M +A S+F  M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + PN+  YN L+ G+C+  ++ +A E   EM    L PN VT+  ++DG CK G+L  A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL-------CSEME----------- 286
             F  M   G+ P+ FVY  L+DG C+  ++  A+++       C+              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777

Query: 287 -------KFEI-------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
                  K E+              P+  TYNI+I  LC  G LE A+ L  +M    ++
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V+TY SL++GY K G   +   V  +    G+EP+ + +S +I+   K G    A+ L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 387 YTEMVIKSLVPD-----VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             +M  K+ V D     +    AL+ G +K G M+   ++ + M+  +  P   TV  LI
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957

Query: 442 H 442
           +
Sbjct: 958 N 958



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 267/603 (44%), Gaps = 79/603 (13%)

Query: 20  DVTENLLKSRK---PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR 76
           +V  ++L+S++   P  +  S FN ++S ++ +     FS L +     G  E+AL V  
Sbjct: 63  EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVE 121

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-----GLVADVVTYGVLIDCCCG 131
           +                +I++     V E +  +V C     G   D V +G+L D    
Sbjct: 122 R----------------MIERNW--PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIA 163

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +G + +A+ +F   +   + P +    +L+  L   N++     +++ M E  VV ++ T
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223

Query: 192 YNALMDGYCKVA---------------------DVNRALEFYHEMLHHNLQPNVVTFGVL 230
           Y+ L+  +C+                       +V+ AL+    M+   L P   T+ VL
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK+  L  A +  V M   GV  +   Y+ LIDG  K  N   A  L  EM    I
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +   + Y+  I  +   G +E A+ L   M   G++     Y SLI+GYC+E ++ +   
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++ +  +  T+ +++ G C +G++D A  +  EM+     P+VV++T LI    
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK------- 463
           ++    + +R+ KEM E  I P +F  +SLI GL K  R+  A +F +E  +        
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523

Query: 464 TDGGYCS------------------------PNHVLYAAIIQALCYDGQILKASKLFSDM 499
           T G + S                        PN VL   +I   C   ++++A   +  M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSM 583

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               +  D  TYT ++ GL +  ++ D   +  +M   GI PD     V++ G+ + G++
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643

Query: 560 KSA 562
           + A
Sbjct: 644 QKA 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 44/465 (9%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G   KAL++ + MI++   P   +++ ++   C++         F    + GV+   
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQE--------FVGKSDDGVL--- 153

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
             +  L DGY     +  A+  +   +   L P +    VL+D L +   L    + +  
Sbjct: 154 --FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGN-------LFE--------------AMSLCSEMEKF 288
           M +  V  ++  Y+ LI  HC+AGN       LF+              A+ L   M   
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P  +TY++LI GLC + +LE A+ LL +M   G+  +  TY+ LIDG  K  + + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M   G+      +   I    K G ++ A  L+  M+   L+P    + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             ++ N+++   L  EM +  I  S +T  +++ G+  +G +  A N   E         
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI----ASG 447

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN V+Y  +I+    + +   A ++  +M+   + PD   Y +++ GL +AKRM +  
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
             L +M++ G+ P+A      + GY E  +  SA    +++KE R
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA---DKYVKEMR 549



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 83/337 (24%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS   LI  FS++G++++A  ++ ++    + P +   N LL G  + G+ +   E 
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM + GL  + VTY  +ID  C  GD+ +A  LFDEM  KG+ P   +YT L+ G C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 167 ENKMVEAESMFRSMRE-CGVV-------------------------------------PN 188
            N +  A ++F + ++ C                                        PN
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
             TYN ++D  CK  ++  A E +H+M + NL P V+T+  L++G  K+G        F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 249 HMAKFGVFPNIFVYNCLID----------------------------------------G 268
                G+ P+  +Y+ +I+                                        G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
             K G +  A  +   M + +  PD  T   LI   C
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I    + G++E A  ++ +++   ++P +    +LLNG  K G+   ++ 
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-----IDKGIEPTVVIYTIL 160
            ++E +  G+  D + Y V+I+    +G   KAL L D+M     +D G + ++     L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + G     +M  AE +  +M     +P+  T   L++  C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 176/559 (31%), Positives = 270/559 (48%), Gaps = 42/559 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +FST++ AF   G +++A+ ++RK+E   V P +   N +++GL K G+ D  ++F E+M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 111 VLCGLVADVVTYGVLI-----------------------------------DCCCGQGDV 135
               +   +VTYGVLI                                   D  C  G++
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             AL + D+MI  GI P  V    LI G C  N+M  AE +   M   G V N  T+ ++
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C     + AL F  EML  N +PN     +L+ GLC+ G+   A   +  + + G 
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF 438

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N    N LI G C+AG+  EA  L  EM +  +  D  +YN LI   C  G++E    
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L ++M + GI  ++ TYN L+ G C  G +E+A  +  +  + G  P+  T+  +IDG C
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYC 558

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  ++    L+ EMV   +  + VV+  LI    ++GNM+E  RL  +M    I  +  
Sbjct: 559 KANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSA 618

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLIHGL   G + +A N  L++  K      SPN V Y A+I   C  GQ+ K   +
Sbjct: 619 TYSSLIHGLSNIGLVDSA-NQLLDEMRKEG---LSPNVVCYTALIGGYCKLGQMHKVDSI 674

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M  +N+ P+  TYT M+ G  +   M     LL +M + GIVPDAV    +  G+ +
Sbjct: 675 LQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCK 734

Query: 556 NGDLKSAFRCSEFLKESRI 574
            G ++ A +  + +    I
Sbjct: 735 EGKMEEALKVCDLMSTGGI 753



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 241/475 (50%), Gaps = 4/475 (0%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           F  V+E +  +   GL   + T   L+       +V  +  +FD M   G+ P V +++ 
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++  C   ++ +A  +FR M + GV PN+ TYN ++ G CK   ++ A +F  +M    
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++P++VT+GVL++GL K+     A      M+  G  PN  VYN LIDG+C+ GN+  A+
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            +  +M    ISP+  T N LI+G C   Q+E AE LL++M   G + N  T+ S+I   
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C +   + AL    +M  +  +PN    + L+ G C+ G    A+ L+  ++ K    + 
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V   ALI GL + G+ +E  +L KEMLE  +     + ++LI    K G++        E
Sbjct: 443 VTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              +       P+   Y  ++  LC  G+I +A  L+ + + +   PD  TY  M+ G  
Sbjct: 503 MVRRG----IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYC 558

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +A R+ +   L  +M+ M I  +AV+   ++R Y ENG+++ AFR  + ++   I
Sbjct: 559 KANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 188/363 (51%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++GL + GK     E +  ++  G  A+ VT   LI   C  G   +A  L  EM+++G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +    + Y  LI   C E K+ E   +   M   G+ P++YTYN L+ G C +  +  A 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             +HE   +   P+  T+G+++DG CK   +      F  M    +  N  VY  LI  +
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+ GN+ EA  L  +M    I     TY+ LI GL  +G ++ A  LL +M KEG+  NV
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LI GYCK G M K  S+  +M+   V PN +T++ +I+G CK GN+ AA  L  E
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K +VPD V + AL +G  K+G M+E L++   M    I+    T ++LI G  K   
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLT 772

Query: 450 ISN 452
           +S+
Sbjct: 773 VSS 775



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 240/511 (46%), Gaps = 31/511 (6%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P+++ CN LL+ L+K  +    ++ ++ M  CG+  DV  +  +++  C  G V  A+
Sbjct: 158 LFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAI 217

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF +M   G+ P VV Y  +IHGLC   ++ EA      M +  V P+L TY  L++G 
Sbjct: 218 ELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGL 277

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K+   + A     EM      PN V +  L+DG C++G +  A      M   G+ PN 
Sbjct: 278 VKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNS 337

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
              N LI G+CK+  +  A  L  EM       +  T+  +I  LC   + + A   + +
Sbjct: 338 VTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIME 397

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M       N      L+ G C+ G   +A+ +  ++ EKG   N VT ++LI G C+AG+
Sbjct: 398 MLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGS 457

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + A  L  EM+ + LV D + +  LI    K+G ++E  +L +EM+   I P ++T + 
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNM 517

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTD-----------GGYCSPNH--------------- 473
           L+HGL   G+I  A   + E     +            GYC  N                
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577

Query: 474 -----VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
                V+Y  +I+A C +G + +A +L  DMRS  +   + TY++++ GL     +    
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            LL +M K G+ P+ V    ++ GY + G +
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQM 668



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 197/367 (53%), Gaps = 5/367 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA--LWVYRKIEVLPAIQA--CNALLNGLIKKGKFDSVW 104
           K N  + + L+    + G   EA  LW YR +E   A      NAL++GL + G  +   
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELW-YRLLEKGFAANTVTSNALIHGLCEAGSKEEAA 462

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  +EM+  GLV D ++Y  LI  CC +G V +   L +EM+ +GI+P +  Y +L+HGL
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           CN  K+ EA  ++   ++ G  P+ YTY  ++DGYCK   V    + + EM+   ++ N 
Sbjct: 523 CNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +G L+   C+ G +R A      M   G+      Y+ LI G    G +  A  L  E
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDE 642

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M K  +SP+V  Y  LI G C +GQ+   + +LQ+M    +  N +TY  +I+G+CK G+
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGN 702

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           M+ A  + ++M +KG+ P+ VT+++L +G CK G ++ A+ +   M    +  D + +T 
Sbjct: 703 MKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTT 762

Query: 405 LIDGLSK 411
           LIDG  K
Sbjct: 763 LIDGWHK 769



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 4/174 (2%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLN 92
           + + + + S  IP+   + +S+LI   S +G ++ A   L   RK  + P +    AL+ 
Sbjct: 602 FRLRDDMRSRGIPQ-TSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  K G+   V    +EM +  +  + +TY ++I+  C  G++  A  L +EM  KGI P
Sbjct: 661 GYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVP 720

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             V Y  L +G C E KM EA  +   M   G+  +  TY  L+DG+ K   V+
Sbjct: 721 DAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTVS 774



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 49/99 (49%)

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++ +L    ++  + ++F  M    + PD   ++TM+       R+ D + L   M K+G
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVG 227

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           + P+ V    ++ G  +NG L  AF+  E +++ R+  S
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 176/599 (29%), Positives = 285/599 (47%), Gaps = 52/599 (8%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L  A LY  A  L+  +   +     P  V  SV  AL+  +  +  P V   L+  + +
Sbjct: 130 LCAAGLYPQANGLLDQM---IRAYPTPPLVLSSVHRALSGSDQGR-RPVVLDVLVDTYKK 185

Query: 65  MGHIE---EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
            G +    E + + + + + P+++ CN LL  L++    D +W+    M   G+  DV T
Sbjct: 186 TGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYT 245

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  LI+  C   D+  A  + +EM + G    VV Y  LI GLC    + EA    + M 
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305

Query: 182 ECGVVPNLYTYNALMDGYCK-----------------------------------VADVN 206
           + G+VP+ +TY A+++G CK                                     + +
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A +   EM    +QPN +T+  L+ GLCK+G +  A      M K G   +   YN +I
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +GH +  N  EA  L +EM K  ISP+V+TY+I+I GLC +G+ E A GLL++M  +G+ 
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N   Y  LI GYC+EG    A     +MT + + P++  ++SLI G    G +D A+  
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y EM+ K   P+   +  LI G S  GN+++  +L  +ML + + P+ F  + ++ G FK
Sbjct: 546 YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFK 605

Query: 447 NG---RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           +    ++S+ L   LEK          P++ LY  +I  L   G +  A  + S +  + 
Sbjct: 606 SDNLEKVSSTLKSMLEKG-------LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           L PD+  Y +++ G  +A  M   + LL +M K GI P       ++ G+ ++ D+  A
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 264/571 (46%), Gaps = 64/571 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+STLI  F   G+ +EA  + +++    V P     + L+ GL K G+        
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G +AD +TY ++I+    Q +  +A  L +EM   GI P V  Y+I+I+GLC  
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK-------------------------- 201
            +   A  +   M   G+ PN + Y  L+ GYC+                          
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526

Query: 202 ---------VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
                    V  ++ A+E+Y EML    QPN  T+G L+ G    G L  A      M  
Sbjct: 527 NSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN F+Y  +++G+ K+ NL +  S    M +  + PD   Y I+I  L   G ++ 
Sbjct: 587 SGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQA 646

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +L  + K G++ + + Y SLI G+CK  DMEKA+ +  +M +KG+EP +  +++LID
Sbjct: 647 AVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALID 706

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+ +I  A  ++  ++ K L P+ V +T LIDG  K G++++ + LY EML   + P
Sbjct: 707 GFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAP 766

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
             F  S L  G   +G +  AL    E   +   GY   +   +  ++   C  G++ + 
Sbjct: 767 DAFVYSVLAAGCSNSGDLQQALFITEEMIAR---GYAIISS--FNTLVHGFCKRGKLQET 821

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM--------------------LLA 532
            K    M   ++ P   T   ++ GL  A ++ +                       L  
Sbjct: 822 VKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFT 881

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           DMI  G+VP  VI+  M++ + + G L  A 
Sbjct: 882 DMINQGLVPLDVIHN-MIQSHCKQGYLDKAL 911



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 256/553 (46%), Gaps = 43/553 (7%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++TLI      G IEEA    +++E   ++P      A++NGL K+G+ D     
Sbjct: 276 LNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCL 335

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   GL+ +VV Y  LID    QG+  +A  +  EM   G++P  + Y  LI GLC 
Sbjct: 336 LDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCK 395

Query: 167 ENKMVEAESMFRSM-----------------------------------RECGVVPNLYT 191
             +M  A  + + M                                   R+ G+ PN+YT
Sbjct: 396 LGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYT 455

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y+ +++G C++ +  RA     +M+   L+PN   +  L+ G C+ G    A      M 
Sbjct: 456 YSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMT 515

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +  + P+++ YN LI G    G + EA+    EM +    P+ FTY  LI G    G LE
Sbjct: 516 RENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLE 575

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            AE LL +M   G+  N   Y  +++GY K  ++EK  S    M EKG+ P+   +  +I
Sbjct: 576 KAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVI 635

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                +G++ AA+ + + +    LVPD +++ +LI G  K  +M++ + L  EM +  I 
Sbjct: 636 HNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE 695

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P +   ++LI G  K+  IS+A N F     K       PN V Y  +I   C  G I  
Sbjct: 696 PGISCYNALIDGFCKSDDISHARNIFNSIICKG----LPPNCVTYTTLIDGYCKAGDIRD 751

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L+++M ++ + PD   Y+ +  G   +  +   + +  +MI  G    +  N  +V 
Sbjct: 752 AIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFN-TLVH 810

Query: 552 GYQENGDLKSAFR 564
           G+ + G L+   +
Sbjct: 811 GFCKRGKLQETVK 823



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 22/266 (8%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GLV D + YG LI   C   D+ KA+ L DEM  KGIEP +  Y  LI G C  + +  A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            ++F S+   G+ PN  TY  L+DGYCK  D+  A++ Y+EML   + P+   + VL  G
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
               G+L+ A      M   G +  I  +N L+ G CK G L E +     M   +I P 
Sbjct: 778 CSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPS 836

Query: 294 VFTYNILIKGLCGVGQLEGAE--------------------GLLQKMYKEGILANVVTYN 333
           + T   ++ GL   G+L  A                      L   M  +G++   V +N
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN 896

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKG 359
            +I  +CK+G ++KAL +   +  KG
Sbjct: 897 -MIQSHCKQGYLDKALMLHDALVAKG 921



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 28/304 (9%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-----ILANV-------------VTY 332
           +PD F +  L   LC  G    A GLL +M +       +L++V             V  
Sbjct: 119 APDAFAH--LAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVL 176

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           + L+D Y K G +     V   M + G+ P++   + L+    +A  +D    +   M  
Sbjct: 177 DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG 236

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + PDV  ++ LI+   K  +++   ++ +EM E   + +V T ++LI GL + G I  
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  +   K +  D G   P+   Y AII  LC  G+  +A  L  +M    L P+   Y+
Sbjct: 297 AFGY---KKEMEDYGLV-PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYS 352

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE- 571
           T++ G +R     +   ++ +M   G+ P+ +    ++RG  + G +    R S  LK+ 
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG---RASRILKQM 409

Query: 572 SRIG 575
           ++IG
Sbjct: 410 TKIG 413


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 274/515 (53%), Gaps = 9/515 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V    E+M   G+  ++ TY +LI+C C +  + 
Sbjct: 74  KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G EP +V    L++G C+ N++ +A S+   M E G  P+ +T+N L+
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G  +    + A+     M+    QP++VT+G++++GLCK G++  A +    M +  + 
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P + +YN +ID  C   N+ +A++L +EM+   I P+V TYN LI+ LC  G+   A  L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  NVVT+++LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C 
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  M+ K   P+VV +  LI G  K   + E + L++EM +  +  +  T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG F+     NA   F  K   +DG    P+ + Y+ ++  LC +G++  A  +F
Sbjct: 434 YTTLIHGFFQARECDNAQIVF--KQMVSDG--VLPDIMTYSILLDGLCNNGKVETALVVF 489

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + PD  TY  M+ G+ +A ++ D   L   +   G+ P+ V    M+ G+   
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549

Query: 557 G---DLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           G   +  + FR  E  +E  +  S T     R+ L
Sbjct: 550 GLKEEADALFR--EMKEEGPLPDSGTYNTLIRAHL 582



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 237/437 (54%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+NLF +M+     P++V ++ L+  +   NK     S+   M+  G+  NLYTY+ L++
Sbjct: 65  AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT   L++G C    +  A +    M + G  P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           + F +N LI G  +     EA++L   M      PD+ TY I++ GLC  G ++ A  LL
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I   VV YN++ID  C   ++  AL++ ++M  KG+ PNVVT++SLI   C  
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G    A  L ++M+ + + P+VV F+ALID   K+G + E  +LY EM++  I P +FT 
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI+G   + R+  A + F     K     C PN V Y  +I+  C   ++ +  +LF 
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    L  +  TYTT++ G  +A+   +  ++   M+  G++PD +   +++ G   NG
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 558 DLKSAFRCSEFLKESRI 574
            +++A    E+L+ S++
Sbjct: 481 KVETALVVFEYLQRSKM 497



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 219/414 (52%), Gaps = 4/414 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++GL +  +        + MV+ G   D+VTYG++++  C +GD+  AL+L  +M  
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
             IEP VVIY  +I  LCN   + +A ++F  M   G+ PN+ TYN+L+   C     + 
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     +M+   + PNVVTF  L+D   K G+L  A   +  M K  + P+IF Y+ LI+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C    L EA  +   M   +  P+V TYN LIKG C   +++    L ++M + G++ 
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VTY +LI G+ +  + + A  V  QM   GV P+++T+S L+DG C  G ++ A+ ++
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             +    + PD+  +  +I+G+ K G +++   L+  +    + P+V T ++++ G  + 
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           G    A   F E   K +G    P+   Y  +I+A   DG    +++L  +MRS
Sbjct: 550 GLKEEADALFREM--KEEGPL--PDSGTYNTLIRAHLRDGDKAASAELIREMRS 599



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 207/398 (52%), Gaps = 3/398 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI          EA+ +  ++ V    P +     ++NGL K+G  D      ++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +   VV Y  +ID  C   +V  ALNLF EM +KGI P VV Y  LI  LCN  + 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   M E  + PN+ T++AL+D + K   +  A + Y EM+  ++ P++ T+  L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G C    L  A + F  M     FPN+  YN LI G CKA  + E M L  EM +  +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +  TY  LI G     + + A+ + ++M  +G+L +++TY+ L+DG C  G +E AL 
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   +    +EP++ T++ +I+G CKAG ++    L+  + +K + P+VV +T ++ G  
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           + G  +E   L++EM E    P   T ++LI    ++G
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 229/474 (48%), Gaps = 6/474 (1%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D     + +MV       +V +  L+            ++L ++M + GI   +  Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI+  C  +++  A ++   M + G  P++ T N+L++G+C    ++ A+    +M+  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             QP+  TF  L+ GL +      A      M   G  P++  Y  +++G CK G++  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +SL  +ME+ +I P V  YN +I  LC    +  A  L  +M  +GI  NVVTYNSLI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C  G    A  + S M E+ + PNVVTFS+LID   K G +  A  LY EM+ +S+ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +++LI+G      + E   +++ M+     P+V T ++LI G  K  R+   +  F 
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E + +   G    N V Y  +I       +   A  +F  M SD + PD  TY+ +L GL
Sbjct: 421 EMSQRGLVG----NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLK 570
               ++   +++   + +  + PD     +M+ G  + G ++  +   CS  LK
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 197/388 (50%), Gaps = 21/388 (5%)

Query: 182 ECGVVPNLYT--------YNALMDGYCKVADVNR--------ALEFYHEMLHHNLQPNVV 225
           +CG  P  ++        ++ +   Y K++ +NR        A+  + +M+     P++V
Sbjct: 24  KCGTAPPSFSHCSFWVRDFSGVRYDYRKIS-INRLNDLKLDDAVNLFGDMVKSRPFPSIV 82

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            F  L+  + K+ +     +    M   G+  N++ Y+ LI+  C+   L  A+++ ++M
Sbjct: 83  EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    PD+ T N L+ G C   ++  A  L+ +M + G   +  T+N+LI G  +    
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+++  +M  KG +P++VT+  +++G CK G+ID A+ L  +M    + P VV++  +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           ID L    N+ + L L+ EM    I P+V T +SLI  L   GR S+A     +  ++  
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK- 321

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               +PN V ++A+I A   +G++++A KL+ +M   ++ PD  TY++++ G     R+ 
Sbjct: 322 ---INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +   +   MI     P+ V    +++G+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGF 406


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/456 (33%), Positives = 237/456 (51%), Gaps = 10/456 (2%)

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G   +  E  EEM   G   D  T+  +I      GD+  A++    M   G +P VV Y
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           T LI       K+ EA  +   MRE G  PNL TYN L+D  CK++ V  A +   +M+ 
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               PNV+TF  L+DG CK G +  A      M   G+ PN+  Y+ LIDG CK+    E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  EM+   ++PD FTY+ LI GLC   ++E AE +L++M   G   +VV Y+S+I 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-SLV 396
            +CK G + +A     +M ++   P+VVT++++IDG CK G I  A  +  +M     ++
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDVV ++ +I+GL K   + E  +L   M +A   P V T +++I GL K GR+  A  +
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA-EY 359

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            L+   +     C+PN V Y  +I  LC   ++ +A ++  +MR+    P+  TY TM+ 
Sbjct: 360 LLQGMKRAG---CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416

Query: 517 GLLRAKRMLDVMMLLADMI--KMGIVPDAVINQVMV 550
           GL  + R+ +   L+  M   +    PDA   + +V
Sbjct: 417 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 237/467 (50%), Gaps = 5/467 (1%)

Query: 36  YSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNG 93
           ++    L  ++   F P  F+   +I A +  G ++ A+   R +   P +    AL+  
Sbjct: 7   HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAA 66

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             +  K +   +  EEM   G   ++VTY VL+D  C    V  A ++  +MI+ G  P 
Sbjct: 67  FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           V+ +  L+ G C    + +A  +   M   G+ PN+ TY+AL+DG CK      A E   
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM    + P+  T+  L+ GLCK  ++  A      MA  G  P++ VY+ +I   CK+G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTY 332
            L EA     EM K   SPDV TYN +I GLC +G++  A+ +L +M + G +L +VVTY
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++I+G CK   + +A  +  +M + G  P+VVT++++IDG CK G ++ A  L   M  
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               P+VV +T LI GL K   + E  R+ +EM  A   P++ T +++++GL  +GRI  
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           A        D      CSP+   Y  I+ AL     + +A +L   M
Sbjct: 427 AQQLVQRMKDGR--AECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/448 (33%), Positives = 232/448 (51%), Gaps = 10/448 (2%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++  +   G  D   +    M   G   +VVTY  LI        + +A+ L +EM ++G
Sbjct: 31  IITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 87

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P +V Y +L+  LC  + +  A+ + + M E G  PN+ T+N+L+DG+CK  +V+ A 
Sbjct: 88  CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 147

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +    M+   ++PNVVT+  L+DGLCK  +   A      M   GV P+ F Y+ LI G 
Sbjct: 148 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGL 207

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKA  + EA  +   M     +PDV  Y+ +I   C  G+L  A+  LQ+M K+    +V
Sbjct: 208 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 267

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VTYN++IDG CK G + +A  +  QM E G V P+VVT+S++I+G CK+  +  A  L  
Sbjct: 268 VTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLD 327

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            M      PDVV +T +IDGL K G ++E   L + M  A   P+V T ++LI GL K  
Sbjct: 328 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 387

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR--P 506
           ++  A     E  +      C PN V Y  ++  LC  G+I +A +L   M+       P
Sbjct: 388 KVDEAERVMEEMRN----AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 443

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           D  TY T++  L+ +  + +   LL  M
Sbjct: 444 DAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 236/463 (50%), Gaps = 9/463 (1%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  GD+  AL L +EM   G  P    +T +I  + N   +  A    RSM   G  PN+
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TY AL+  + +   +  A++   EM      PN+VT+ VL+D LCK+  + AA +    
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M + G  PN+  +N L+DG CK GN+ +A  L   M    + P+V TY+ LI GLC   +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A+ +L++M   G+  +  TY++LI G CK   +E+A  +  +M   G  P+VV +SS
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA- 428
           +I   CK+G +  A     EM  +   PDVV +  +IDGL K G + E   +  +M E+ 
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P V T S++I+GL K+  +  A        D+     C+P+ V Y  II  LC  G+
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLL----DRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A  L   M+     P+  TYTT++ GL +A+++ +   ++ +M   G  P+ V    
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           MV G   +G +K A +  + +K+ R   S  +  T R+ +  L
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECS-PDAATYRTIVNAL 455


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 259/481 (53%), Gaps = 4/481 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K   LP+I   N LL+ + K  KFD V    E+M   G+  ++ TY +LI+C C +  + 
Sbjct: 78  KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL L  +M+  G EP++V  + L++G C+  ++ +A ++   M E G  P+  T+  L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QPN+VT+GV+++GLCK G++  A N    M    + 
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            N+ +Y+ +ID  CK  +  +A++L +EME   + P+V TY+ LI  LC   +   A  L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  NVVT+N+LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C 
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  M+ K   P+VV +  LI+G  K   + E + L++EM +  +  +  T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG F+     NA   F  K   +DG +  PN + Y  ++  LC +G++ KA  +F
Sbjct: 438 YTTLIHGFFQARDCDNAQMVF--KQMVSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVF 493

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + P   TY  M+ G+ +A ++ D   L   +   G+ PD +I   M+ G+   
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553

Query: 557 G 557
           G
Sbjct: 554 G 554



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF  M+     P++  +  L+  +    K     S+   M+  G+  NLYTYN L++
Sbjct: 69  AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +  LI G   H KA    EA++L   M +    P++ TY +++ GLC  G ++ A 
Sbjct: 189 DTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM    I ANVV Y+++ID  CK    + AL++ ++M  KGV PNV+T+SSLI   
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C       A  L ++M+ + + P+VV F ALID   K+G + E  +LY EM++  I P +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT SSLI+G   + R+  A + F     K     C PN V Y  +I   C   +I +  +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TYTT++ G  +A+   +  M+   M+  G+ P+ +    ++ G  
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG L+ A    E+L+ S++
Sbjct: 482 KNGKLEKAMVVFEYLQRSKM 501



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 190/355 (53%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +     ++NGL K+G  D  +    +M    + A+VV Y  +ID  C       ALNL
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM +KG+ P V+ Y+ LI  LCN  +  +A  +   M E  + PN+ T+NAL+D + K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  A + Y EM+  ++ P++ T+  L++G C    L  A + F  M     FPN+  
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G CKA  + E + L  EM +  +  +  TY  LI G       + A+ + ++M 
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+  N++TYN+L+DG CK G +EKA+ V   +    +EP + T++ +I+G CKAG ++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
               L+  + +K + PDV+++  +I G  + G  +E   L+++M E    P   T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 187/333 (56%), Gaps = 5/333 (1%)

Query: 39  FNALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           FN LN +E  K   N  ++ST+I +  +  H ++AL ++ ++E   V P +   ++L++ 
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L    ++        +M+   +  +VVT+  LID    +G +++A  L+DEMI + I+P 
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +  Y+ LI+G C  +++ EA+ MF  M      PN+ TYN L++G+CK   ++  +E + 
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM    L  N VT+  L+ G  +  +   A   F  M   GV PNI  YN L+DG CK G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L +AM +   +++ ++ P ++TYNI+I+G+C  G++E    L   +  +G+  +V+ YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           ++I G+C++G  E+A ++  +M E G  P+  T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 273/541 (50%), Gaps = 13/541 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN L  +  P   PS+  F+ L+ + ++M H    L +  +++   V P +   N L+
Sbjct: 42  SSFNRLLHMHPP---PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G   D  T+  LI   C +G + +AL+LFD+MID+G +
Sbjct: 99  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    P++  Y +++D  CK   V  A   
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + +M+   + P++ T+  L+  LC + E +        M    + P++ +++ ++D  CK
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M +  + PDV TY  L+ G C   +++ A  +   M ++G   +V++
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y +LI+GYCK   ++KA+ +  +M  K   P+  T+++L+ G C  G +  A+ L+ EMV
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD+V ++ L+D L K+ +++E + L K +  + + P +   + +I G+ + G + 
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       P+   Y  +I  LC  G + +A+KLF +M  ++  PD CTY
Sbjct: 459 AARDLFSNLSSKG----LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 514

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG-DLKSAFRCSEFLK 570
            T+ RG L+    L  + LL +M+  G   D     ++V    ++G D  S F     L 
Sbjct: 515 NTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLS 574

Query: 571 E 571
           E
Sbjct: 575 E 575



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 256/494 (51%), Gaps = 12/494 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +    S+   ++S  +P   P+V++   LI +F  +  +  A  V  KI  L   P  
Sbjct: 70  KHYSTVLSLSTQMDSFGVP---PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDP 126

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L   
Sbjct: 127 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 186

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M     +P VVIYT +I  LC + ++ EA ++F  M   G+ P+++TY +L+   C + +
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   ++M++  + P+VV F  ++D LCK G++  A      M + GV P++  Y  
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M +   +PDV +Y  LI G C + +++ A  L ++M ++ 
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + +  TYN+L+ G C  G ++ A+++  +M  +G  P++VT+S L+D  CK  +++ AM
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAM 426

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L   +   +L PD+ V+  +IDG+ + G ++    L+  +    + PSV+T + +IHGL
Sbjct: 427 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G ++ A   F+E     DG  CSP+   Y  I +    + + L+A +L  +M +   
Sbjct: 487 CKRGLLNEANKLFME----MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 542

Query: 505 RPDNCTYTTMLRGL 518
             D  T T ++  L
Sbjct: 543 SADVSTTTLLVEML 556



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 207/425 (48%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ ++     P++V +  L+  +          S+   M   GV PN+YT N L++
Sbjct: 40  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 99

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V  A     ++L    QP+  TF  L+ GLC  G++  A + F  M   G  P
Sbjct: 100 SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 159

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+G CK GN   A+ L   ME+    PDV  Y  +I  LC   Q+  A  L 
Sbjct: 160 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TY SL+   C   + +   ++ +QM    + P+VV FS+++D  CK 
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M+ + + PDVV +T L+DG      M E ++++  M+     P V + 
Sbjct: 280 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 339

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI+G  K  +I  A+  F E   K       P+   Y  ++  LC+ G++  A  LF 
Sbjct: 340 TTLINGYCKIHKIDKAMYLFEEMCRKE----WIPDTKTYNTLMHGLCHVGRLQDAIALFH 395

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  TY+ +L  L +   + + M LL  +    + PD  +  +++ G    G
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455

Query: 558 DLKSA 562
           +L++A
Sbjct: 456 ELEAA 460



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 189/395 (47%), Gaps = 4/395 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  +      P++  +  L+    K+   +  L    +M    + PNV T 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++  C +  +  A +    + K G  P+   +  LI G C  G + EA+ L  +M  
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+V TY  LI GLC VG    A  LL+ M +     +VV Y S+ID  CK+  + +
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ SQM  +G+ P++ T++SL+   C          L  +MV   ++PDVV+F+ ++D
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G + E   +   M++  + P V T ++L+ G      +  A+  F     K   G
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK---G 331

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + +P+ + Y  +I   C   +I KA  LF +M      PD  TY T++ GL    R+ D 
Sbjct: 332 F-APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + L  +M+  G +PD V   +++    +N  L+ A
Sbjct: 391 IALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 161/503 (32%), Positives = 261/503 (51%), Gaps = 22/503 (4%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ L+        +E+A   L   +++  +P     NAL++G  K   F   ++F  EM
Sbjct: 44  TFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V    +  VVTY  ++D  C       A+ L DEM DKG  P +  Y +++ GLC E K+
Sbjct: 104 VKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 163

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ M   M   G  P++ TYN+ + G CK   V+ A +F   M    + P+VV++  +
Sbjct: 164 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTV 220

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK G+L +A     HM+  G  P++  Y+ LIDG CK G +  AM L   M K   
Sbjct: 221 INGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 280

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++  YN L+  L  +G +  AE +L +M + G   +VV+YN+ IDG CK   ++KA +
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340

Query: 351 VCSQMTEKGVEPNVVTFSSLI----------DGQCKAGNIDAAMGLYTEMVIKSLV-PDV 399
           V  +M E+G  PN  ++S LI          DG CK G  D A  L+++++ + +  PDV
Sbjct: 341 VFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 400

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             +  ++D   K   + + L+++K+MLE K   +V T + L+HGL  + R+S+A    L 
Sbjct: 401 FFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCCNVVTWNILVHGLCVDDRLSDAETMLLT 459

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D+   G+  P+ V Y  ++ A+C  G+   A +LF +       PD  TY+ ++ GL+
Sbjct: 460 MVDE---GFI-PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 515

Query: 520 RAKRMLDVMMLLADMIKMGIVPD 542
                 +  +L   +++   VPD
Sbjct: 516 HENMAEEAYLLFTKLVERRWVPD 538



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 225/472 (47%), Gaps = 52/472 (11%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           KA  +F EMIDK  +P    + IL+ GLC  N++ +A  +   M+E G VP+   YNAL+
Sbjct: 25  KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALI 84

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GY K  D  +A +F  EM+ ++  P VVT+  ++DGLCK    R A      M   G  
Sbjct: 85  SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI+ YN +++G C+   L EA  +  EM      PDV TYN  IKGLC   +++ A   
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L +M    +  +VV+Y ++I+G CK GD++ A  +   M+ +G  P+VVT+SSLIDG CK
Sbjct: 205 LARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261

Query: 377 AGNIDAAMGL-----------------------------------YTEMVIKSLVPDVVV 401
            G ++ AMGL                                     EM  +   PDVV 
Sbjct: 262 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI----------HGLFKNGRIS 451
           + A IDGL K   +K+   ++  M+E   TP+  + S LI           GL K GR  
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   F +  D+     C P+   Y  ++ + C   QI KA ++   M   N   +  T+
Sbjct: 382 EACALFSKVLDEK---ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTW 437

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             ++ GL    R+ D   +L  M+  G +PD V    +V    + G   +A 
Sbjct: 438 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 489



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 238/482 (49%), Gaps = 22/482 (4%)

Query: 51  NPSVFSTLIIAFS---EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + ++++ LI  +S   + G   + L    K   LP +     +++GL K  +     +  
Sbjct: 76  DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLL 135

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   G   ++ TY V+++  C +  + +A  + +EM  +G  P VV Y   I GLC  
Sbjct: 136 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 195

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++ EA      M    V P++ +Y  +++G CK  D++ A      M +    P+VVT+
Sbjct: 196 DRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK GE+  A      M K G  PN+  YN L+    + G++ +A  +  EME+
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG----------ILANVVTYNSLID 337
              +PDV +YN  I GLC   +++ A+ +  +M + G          ++ +++ Y  L+D
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372

Query: 338 GYCKEGDMEKALSVCSQ-MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G CK G  ++A ++ S+ + EK  EP+V  ++ ++D  CK   ID A+ ++ +M+ K+  
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            +VV +  L+ GL  D  + +   +   M++    P   T  +L+  + K G+ + AL  
Sbjct: 433 -NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 491

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E       G C P+ V Y+A+I  L ++    +A  LF+ +      PD+ T   + R
Sbjct: 492 FEEAVK----GGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHR 547

Query: 517 GL 518
            L
Sbjct: 548 KL 549



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 213/425 (50%), Gaps = 22/425 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ ++    E   ++EA  +  ++ V    P +   N+ + GL K  + D   +F 
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL 205

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M    +  DVV+Y  +I+  C  GD+  A  + D M ++G  P VV Y+ LI G C  
Sbjct: 206 ARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +  SM + G  PN+  YN+L+    ++  + +A +   EM      P+VV++
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPN----------IFVYNCLIDGHCKAGNLFE 277
              +DGLCK   ++ A   F  M + G  PN          I +Y  L+DG CK G   E
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382

Query: 278 AMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           A +L S++   +I  PDVF YN+++   C   Q++ A  + ++M ++    NVVT+N L+
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILV 441

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G C +  +  A ++   M ++G  P+ VT+ +L+D  CK G   AA+ L+ E V    V
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 501

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH---GLFKNGRISNA 453
           PDVV ++ALI GL  +   +E   L+ +++E +  P   T+  L+H    L    R +  
Sbjct: 502 PDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTL-GLLHRKLKLLNKPRKAEV 560

Query: 454 LNFFL 458
           ++ +L
Sbjct: 561 VDLYL 565



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 184/370 (49%), Gaps = 14/370 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGK 99
           L  + +  + P V  +++ I    +   ++EA     ++ V P + +   ++NGL K G 
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD 229

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            DS     + M   G   DVVTY  LID  C  G+V +A+ L D M+  G  P +V Y  
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           L+  L     + +AE M   M   G  P++ +YNA +DG CK   V +A   +  M+   
Sbjct: 290 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349

Query: 220 LQPN----------VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDG 268
             PN          ++ + VL+DGLCK G    A   F  +    +  P++F YN ++D 
Sbjct: 350 CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           HCK   + +A+ +  +M +     +V T+NIL+ GLC   +L  AE +L  M  EG + +
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 468

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            VTY +L+D  CK G    AL +  +  + G  P+VVT+S+LI G       + A  L+T
Sbjct: 469 FVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 528

Query: 389 EMVIKSLVPD 398
           ++V +  VPD
Sbjct: 529 KLVERRWVPD 538



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  ++  L  + +  KAS +F +M   + +PD  T+  +LRGL R+ ++     LL
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M +MG VPD  I   ++ GY +  D   AF+   FL E
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK---FLAE 102


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 271/549 (49%), Gaps = 46/549 (8%)

Query: 52  PSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           PSV  TL+   ++ G +++A   L   R++ V P  + CN +L  L +  +   V   ++
Sbjct: 134 PSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD 193

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            +     V +V T+ ++ID  C +G++++A  LF  M   G  P VV Y  LI G     
Sbjct: 194 LLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + E E +   MR+ G   ++ TYNAL++ + K   + +A  ++ EM    +  NVVTF 
Sbjct: 250 DLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFS 309

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
             +D  CK G ++ A   F  M   G+ PN F Y  L+DG CKAG L +A+ L  EM   
Sbjct: 310 TFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 369

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P+V TY +++ GLC  G++  A+ +L  M + G+ AN + Y +LI G+    + E+A
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERA 429

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L + +QM  KG+E +V  + +LI G CK   +D A  L  +M    L P+ V++T ++D 
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K G   E + L  ++L++   P+V T  +LI GL K G IS A++ F    +K     
Sbjct: 490 LFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHF----NKMRELG 545

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN   Y A+I   C  G + KA  L ++M    +  D   YT+++ G ++   + D  
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605

Query: 529 ML-----------------------------------LADMIKMGIVPDAVINQVMVRGY 553
            L                                   L++MI  GI PD  +   ++R Y
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665

Query: 554 QENGDLKSA 562
           Q+ G+++ A
Sbjct: 666 QKLGNMEEA 674



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 158/478 (33%), Positives = 249/478 (52%), Gaps = 17/478 (3%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           +P  N   F+ +I    + G + EA  ++ +++ +   P +   N+L++G  K G  + V
Sbjct: 195 LPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            +   EM   G  ADVVTY  LI+C    G + KA + F EM  +G+   VV ++  +  
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDA 314

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C E  + EA  +F  MR  G++PN +TY +L+DG CK   ++ A+    EM+H  L PN
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+ V++DGLCK G++  A N    M + GV  N  +Y  LI GH    N   A+ L +
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+   +  DV  Y  LI GLC   +++ A+ LL KM   G+  N V Y +++D   K G
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
              +A+++  ++ + G +PNVVT+ +LIDG CKAG+I  A+  + +M    L P+V  +T
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           ALIDG  K G++ + + L  EM++  ++      +SLI G  K   + +A   F  KT  
Sbjct: 555 ALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA---FALKTKM 611

Query: 464 TDGG-----YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            + G     YC      Y   I   C    + +A  + S+M    + PD   Y  ++R
Sbjct: 612 IESGLQLDLYC------YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIR 663



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 4/217 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNV TF+ +ID  CK G +  A  L+  M      PDVV + +LIDG  K G+++E  +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             EM ++     V T ++LI+   K GR+  A ++F E   K  G     N V ++  + 
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM--KRQG--VVANVVTFSTFVD 313

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A C +G + +A KLF+ MR   + P+  TYT+++ G  +A R+ D ++LL +M+  G+VP
Sbjct: 314 AFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 373

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           + V   VMV G  + G +  A      ++   + ++E
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANE 410



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + + S++ TLI    +   ++EA  +  K+    + P       +++ L K GK      
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +++  G   +VVTY  LID  C  G + +A++ F++M + G++P V  YT LI G C
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               + +A  +   M + G+  +   Y +L+DGY K A++  A     +M+   LQ ++ 
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLY 621

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +   + G C +  ++ A      M   G+ P+  VYNCLI  + K GN+ EA SL +EM
Sbjct: 622 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681

Query: 286 E 286
           E
Sbjct: 682 E 682


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 174/563 (30%), Positives = 260/563 (46%), Gaps = 77/563 (13%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           +LP I+  + +LNGLI+  +F      ++E+V  GL  DV  Y  ++   C   D ++A 
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAR 235

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +   M   G + +V  Y + I GLC   ++ EA  +   +   G+  ++ TY  L+ G 
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CKV +     E  +EM+     P+      L+DGL K G + +A +    + KFGV P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI-------------------- 299
           FVYN LI+  CK G L EA SL + M    + P+  TY+I                    
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 300 ---------------LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
                          LI G C +G+L  A+ L  +M   G+  NVV Y SLI GYCKEG+
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A  +  +MT KG+ PN  TF++LI G C A  +  A  L+ EMV  +++P+ V +  
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF------L 458
           LI+G  K+GN      L  EM+E  + P  +T   LI GL   GR+S A  F        
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN---------- 508
           +K ++ +G  C PN V Y A+I  LC  G + KA  L  +M + N  P+           
Sbjct: 596 QKLNEIEG--CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653

Query: 509 ------------------------CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
                                    TY  ++RG  +  R+ +   +L +MI  GI PD +
Sbjct: 654 TSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 545 INQVMVRGYQENGDLKSAFRCSE 567
               ++  Y   GDLK A +  E
Sbjct: 714 SYSTIIYEYCRRGDLKEAIKLWE 736



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 252/483 (52%), Gaps = 13/483 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L+ GL K  +F++  E   EM+  G V        L+D    +G++  A +L +++   
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P++ +Y  LI+ +C + K+ EAES+F +M   G+ PN  TY+ L+D +CK   ++ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L F  +M    ++  V  +  L+ G CK+G+LRAA + F  M   G+ PN+ +Y  LI G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CK G L  A  L  EM    ISP+ +T+  LI GLC   ++  A  L  +M +  ++ N
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            VTYN LI+G+CKEG+  +A  +  +M EKG+ P+  T+  LI G C  G +  A     
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 389 EMV--------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           ++         I+  +P+VV +TALI+GL K G M +   L +EML +   P+  T +  
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 649

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +  L   G I  A+       D    G+ + N V Y  +I+  C  G+I +A+++  +M 
Sbjct: 650 LDYLTSEGNIEKAIQLH----DVLLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMI 704

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              + PD  +Y+T++    R   + + + L   M+  G+ PD V    ++ G    G+L 
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764

Query: 561 SAF 563
            AF
Sbjct: 765 KAF 767



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 215/418 (51%), Gaps = 12/418 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI +F + G ++ AL    K   + +   +   ++L++G  K GK  +    +
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  GL  +VV Y  LI   C +G++  A  L+ EM  KGI P    +T LI GLC+ 
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N+M EA  +F  M E  V+PN  TYN L++G+CK  +  RA E   EM+   L P+  T+
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKF--------GVFPNIFVYNCLIDGHCKAGNLFEAM 279
             L+ GLC  G +  A  F   +           G  PN+  Y  LI+G CK G + +A 
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            LC EM      P+  TY   +  L   G +E A  L   +  EG LAN VTYN LI G+
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGF 687

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +++A  V   M + G+ P+ +++S++I   C+ G++  A+ L+  M+ + + PD 
Sbjct: 688 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 747

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           V +  LI G    G + +   L  +M+   + P+  T +SLIHG      +S+  ++F
Sbjct: 748 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 222/483 (45%), Gaps = 57/483 (11%)

Query: 134 DVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAES----------------- 175
           D   AL  F+ + + K  + +   + ILIH L   N    A S                 
Sbjct: 72  DSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFE 131

Query: 176 -----------------------------------MFRSMRECGVVPNLYTYNALMDGYC 200
                                              + R M +CG++P + T + +++G  
Sbjct: 132 SFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLI 191

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++     AL  + E++   L+P+V  +  ++  LC++ +   A      M   G   ++ 
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN  I G CK   ++EA+ + + +    +  DV TY  L+ GLC V + E  E ++ +M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G + +    ++L+DG  K+G++  A  + +++ + GV P++  +++LI+  CK G +
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  L+  M  K L P+ V ++ LID   K G +   L    +M E  I  +V+  SSL
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  K G++  A + F    D+       PN V+Y ++I   C +G++  A +L+ +M 
Sbjct: 432 ISGHCKLGKLRAAKSLF----DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              + P+  T+T ++ GL  A RM +   L  +M++  ++P+ V   V++ G+ + G+  
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 561 SAF 563
            AF
Sbjct: 548 RAF 550


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 252/450 (56%), Gaps = 7/450 (1%)

Query: 58  LIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+  FS++GHI+ +  V+ KI      P       L+ GL  KG+      F++++V  G
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              D V+YG LI+  C  G+   A+ L   +  K + P VV+Y+ +I  +C +  + +A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            ++  M    + P++ TY++L+ G+C V  +  A++ ++ M+  N+ PNV TF +L+DG 
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G++R A N    M K  V  ++  YN L+DG+C    + +A SL + M +  ++PDV
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           ++Y+I+I G C +  ++ A  L ++M+ + I  NVVTYNSL+DG CK G    AL +  +
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++G   N++T++S++D  CK  ++D A+ L T++  K + PD+  +T LI+GL K G 
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + +  ++++++L    +P+++T +SLI+G    G     L    +  D      C PN +
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG----CIPNAI 514

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            Y  +I +L    +  KA KL  +M +  L
Sbjct: 515 TYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 261/493 (52%), Gaps = 8/493 (1%)

Query: 52  PSV-FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           P++ F  ++ +  +    + AL + +++E   + P    CN L+N   + G     +  +
Sbjct: 57  PAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVF 116

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +++  G   D VT+ +LI   C +G+V KAL   D+++ +G +   V Y  LI+GLC  
Sbjct: 117 AKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRV 176

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +   A  + R +    V PN+  Y+ ++D  CK   VN A + Y EM+   + P+VVT+
Sbjct: 177 GETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTY 236

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C VG+L+ A + F  M    + PN++ ++ LIDG CK G + EA ++ + M K
Sbjct: 237 SSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK 296

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  DV TYN L+ G C V Q+  A+ L   M + G+  +V +Y+ +I+G+CK   +++
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDE 356

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  +M  K + PNVVT++SL+DG CK+G    A+ L  EM  +    +++ + +++D
Sbjct: 357 AMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILD 416

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            + K+ ++ + + L  ++ E  I P +FT + LI+GL K GR+ +A   F    D    G
Sbjct: 417 AICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF---EDLLVKG 473

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           Y SPN   Y ++I   C  G   +   + S M+ +   P+  TY  ++  L         
Sbjct: 474 Y-SPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKA 532

Query: 528 MMLLADMIKMGIV 540
             LL +MI  G++
Sbjct: 533 EKLLREMIARGLL 545



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 239/442 (54%), Gaps = 4/442 (0%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           +   + +G ++           AL+L  +M   GI+P  +   +L++       +  + S
Sbjct: 55  IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  + + G  P+  T+  L+ G C   +V++AL F+ +++    Q + V++G L++GLC
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +VGE +AA      +    V PN+ +Y+ +ID  CK   + +A  L  EM    ISPDV 
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY+ LI G C VG+L+ A  L  +M  + I  NV T++ LIDG+CKEG + +A +V + M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            +K V+ +VVT++SL+DG C    ++ A  L+  M  + + PDV  ++ +I+G  K   +
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E ++L++EM   +I P+V T +SL+ GL K+GR S AL    E  D+        N + 
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQ----PSNIIT 410

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +I+ A+C +  + KA  L + ++   ++PD  TYT ++ GL +  R+ D   +  D++
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470

Query: 536 KMGIVPDAVINQVMVRGYQENG 557
             G  P+      ++ G+   G
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKG 492



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 210/431 (48%), Gaps = 7/431 (1%)

Query: 141 LFDEMIDKGIE-PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           LF+ ++ K    P  + +  ++  L    +   A S+ + M   G+ P+  T N LM+ +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            ++  +  +   + ++L     P+ VTF +L+ GLC  GE+  A  F   +   G   + 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  LI+G C+ G    A+ L   ++   + P+V  Y+ +I  +C    +  A  L  +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  + I  +VVTY+SLI G+C  G ++ A+ + ++M    + PNV TFS LIDG CK G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A  +   M+ K++  DVV + +L+DG      + +   L+  M +  +TP V++ S 
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I+G  K   +  A+  F E   K       PN V Y +++  LC  G+   A +L  +M
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQ----IFPNVVTYNSLVDGLCKSGRTSCALELVDEM 399

Query: 500 RSDNLRPDN-CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             D  +P N  TY ++L  + +   +   ++LL  + + GI PD     V++ G  + G 
Sbjct: 400 H-DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458

Query: 559 LKSAFRCSEFL 569
           L  A +  E L
Sbjct: 459 LDDAQKVFEDL 469


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 155/486 (31%), Positives = 258/486 (53%), Gaps = 4/486 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V    E+M   G+  +  TY +LI+C C +  + 
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G EP +V  + L++G C+  ++ EA ++   M   G  PN  T+N L+
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QP++VT+GV+++GLCK G+   A N    M +  + 
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P + +YN +IDG CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  +V T+++LID + KEG + +A  +  +M ++ ++P++VT+SSLI+G C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  MV K   PDVV +  LI G  K   ++E + +++EM +  +  +  T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            + LI GLF+ G    A   F E    +DG    PN + Y  ++  LC +G++ KA  +F
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMV--SDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + P   TY  M+ G+ +A ++ D   L  ++   G+ PD V    M+ G+   
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549

Query: 557 GDLKSA 562
           G  + A
Sbjct: 550 GSKEEA 555



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 3/401 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI          EA+ +  ++      P +     ++NGL K+G  D  +   
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M    L   V+ Y  +ID  C    +  ALNLF EM  KGI P VV Y+ LI  LCN 
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  +A  +   M E  + P+++T++AL+D + K   +  A + Y EM+  ++ P++VT+
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C    L  A   F  M     FP++  YN LI G CK   + E M +  EM +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  +  TYNILI+GL   G  + A+ + ++M  +G+  N++TYN+L+DG CK G +EK
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ V   +    +EP + T++ +I+G CKAG ++    L+  + +K + PDVV +  +I 
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G  + G+ +E   L+KEM E    P+    ++LI    ++G
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EM+     P+++ ++ L+  +   NK     S+   M+  G+  N YTY+ L++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +PN+VT   L++G C    +  A      M   G  P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           N   +N LI G   H KA    EAM+L   M      PD+ TY +++ GLC  G  + A 
Sbjct: 185 NTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM +  +   V+ YN++IDG CK   M+ AL++  +M  KG+ PNVVT+SSLI   
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + PDV  F+ALID   K+G + E  +LY EM++  I PS+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T SSLI+G   + R+  A   F     K    +C P+ V Y  +I+  C   ++ +  +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +F +M    L  +  TY  +++GL +A        +  +M+  G+ P+ +    ++ G  
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG L+ A    E+L+ S++
Sbjct: 478 KNGKLEKAMVVFEYLQRSKM 497



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 233/472 (49%), Gaps = 5/472 (1%)

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL  + K D     + EMV       ++ +  L+            ++L ++M + GI 
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
                Y+ILI+  C  +++  A ++   M + G  PN+ T ++L++GYC    ++ A+  
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M     QPN VTF  L+ GL    +   A      M   G  P++  Y  +++G CK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G+   A +L ++ME+ ++ P V  YN +I GLC    ++ A  L ++M  +GI  NVVT
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLI   C  G    A  + S M E+ + P+V TFS+LID   K G +  A  LY EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +S+ P +V +++LI+G      + E  ++++ M+     P V T ++LI G  K  R+ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             +  F E + +   G    N V Y  +IQ L   G    A ++F +M SD + P+  TY
Sbjct: 414 EGMEVFREMSQRGLVG----NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            T+L GL +  ++   M++   + +  + P      +M+ G  + G ++  +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 164/496 (33%), Positives = 257/496 (51%), Gaps = 9/496 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI    +   ++EA+ +  ++E     P    C  L++GL K G+ D   E  E M 
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G  ADVV YG LI   C  G++ +   LFDEM+ KGI   VV Y+ L+HGLC   +  
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA ++  +M E G+ P++ TY  L+DG CK      A++  + M+    +P+ VT+ VL+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-- 289
            GLCK G +  A      M + G   ++  YN L+ G C  G + EA+ L + M   E  
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+VFT+N+LI GLC  G+L  A  + +KM K+G   N+VTYN L+ G  K G +++A+
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  Q+ + G  PN  T+S LIDG CK   ++ A GL+ EM    L P +  +  L+  L
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G++++   L++EM  A   P + + +++I G  K G       F  E   K      
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGL 597

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ + ++ +I  L   G++ +A      M +    PD   Y ++L+GL       +++ 
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657

Query: 530 LLADMIKMGIVPDAVI 545
           LL  M   G V D  I
Sbjct: 658 LLHQMAAKGTVLDRKI 673



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 175/550 (31%), Positives = 285/550 (51%), Gaps = 17/550 (3%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEI-PKFNPSVFSTLIIAFS-----EMGHIEEALWV 74
           + + L +SR  + + +SV+  +  +++ P F     S LI  F+     ++G     L +
Sbjct: 80  LVDALARSRN-YGLAFSVYRRMTHVDVLPSFGS--LSALIECFADAQKPQLGFGVVGLVL 136

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
            R   V   I   N +L GL + G          EM    +  D+V+Y  LI+  C    
Sbjct: 137 KRGFTVNVFIM--NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKK 194

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A+ L  EM   G  P  V  T L+ GLC + +M EA  +  +M++ G   ++  Y  
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+C   +++R  E + EML   +  NVVT+  L+ GLC++G+ + A      MA+ G
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  Y  LIDG CK G    AM L + M +    P   TYN+L+ GLC  G +  A 
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM--TEKGVEPNVVTFSSLID 372
            +L+ M ++G  A+VVTYN+L+ G C +G +++AL + + M   E  +EPNV TF+ LI 
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G +  A+ ++ +MV K    ++V +  L+ G  K G +KE + L+K++L+    P
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 494

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           + FT S LI G  K   ++ A   F E   +T G   +P    Y  ++ +LC +G + +A
Sbjct: 495 NSFTYSILIDGFCKMRMLNIAKGLFCEM--RTHG--LNPALFDYNTLMASLCKEGSLEQA 550

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             LF +M + N  PD  ++ TM+ G L+A     V  L   M++MG+ PDA+    ++  
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610

Query: 553 YQENGDLKSA 562
             + G+L  A
Sbjct: 611 LSKLGELDEA 620



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 226/440 (51%), Gaps = 9/440 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ TLI  F   G+++    ++ ++    +   +   + L++GL + G++         M
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DVVTY  LID  C  G    A++L + M++KG EP+ V Y +L+ GLC E  +
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFG 228
           ++A  + R M E G   ++ TYN LM G C    V+ AL+ ++ M  +   L+PNV TF 
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +L+ GLCK G L  A      M K G   N+  YN L+ G  KAG + EAM L  ++   
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+ FTY+ILI G C +  L  A+GL  +M   G+   +  YN+L+   CKEG +E+A
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            S+  +M     EP++++F+++IDG  KAG+      L  +MV   L PD + F+ LI+ 
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           LSK G + E     + M+ +  TP      SL+ GL   G  +  +N   +   K     
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT--- 667

Query: 469 CSPNHVLYAAIIQALCYDGQ 488
              +  + + I+  LC+  Q
Sbjct: 668 -VLDRKIVSTILTCLCHSIQ 686



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 204/397 (51%), Gaps = 11/397 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+     +G  +EA  V   +    + P +     L++GL K G+     +  
Sbjct: 283 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 342

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  G     VTY VL+   C +G V+ A  +   MI+KG +  VV Y  L+ GLC++
Sbjct: 343 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 402

Query: 168 NKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            K+ EA  +F SM   E  + PN++T+N L+ G CK   + +A++ + +M+      N+V
Sbjct: 403 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 462

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+ G  K G+++ A   +  +   G  PN F Y+ LIDG CK   L  A  L  EM
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 522

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               ++P +F YN L+  LC  G LE A+ L Q+M       +++++N++IDG  K GD 
Sbjct: 523 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +  +M E G+ P+ +TFS+LI+   K G +D A      MV     PD +V+ +L
Sbjct: 583 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 642

Query: 406 IDGLSKDGNMKETLRLYKEM------LEAKITPSVFT 436
           + GLS  G+  E + L  +M      L+ KI  ++ T
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 10/365 (2%)

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
           +    A+  +H  L  NL P+  T   L+D L +      A + +  M    V P+    
Sbjct: 53  SQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSL 112

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + LI+    A        +   + K   + +VF  NI++KGLC  G +  A GL+++M +
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           + +  ++V+YN+LI+G CK   +++A+ +  +M   G  PN VT ++L+DG CK G +D 
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           AM L   M  K    DVV++  LI G   +GN+     L+ EML   I+ +V T S L+H
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292

Query: 443 GLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           GL + G+   A   LN   E           P+ V Y  +I  LC DG+   A  L + M
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHG-------IHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                 P N TY  +L GL +   ++D   +L  MI+ G   D V    +++G  + G +
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 560 KSAFR 564
             A +
Sbjct: 406 DEALK 410



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 8/315 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE-----VLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++TL+    + G ++EAL ++  +      + P +   N L+ GL K+G+     + + 
Sbjct: 391 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +MV  G   ++VTY +L+  C   G + +A+ L+ +++D G  P    Y+ILI G C   
Sbjct: 451 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 510

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            +  A+ +F  MR  G+ P L+ YN LM   CK   + +A   + EM + N +P++++F 
Sbjct: 511 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 570

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++DG  K G+ +      + M + G+ P+   ++ LI+   K G L EA S    M   
Sbjct: 571 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 630

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC---KEGDM 345
             +PD   Y+ L+KGL   G       LL +M  +G + +    ++++   C   +E D+
Sbjct: 631 GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 690

Query: 346 EKALSVCSQMTEKGV 360
            + L    Q T +G 
Sbjct: 691 MELLPTFFQGTSEGA 705



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+ L+   +  +L+P       L+D L++  N      +Y+ M    + PS  ++S+LI 
Sbjct: 58  AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
             F + +    L F +       G   + N  +   +++ LC +G + +A  L  +M   
Sbjct: 118 -CFADAQ-KPQLGFGVVGLVLKRG--FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++ PD  +Y T++ GL +AK++ + + LL +M   G  P++V    ++ G  ++G +  A
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 563 FRCSEFLKE 571
               E +K+
Sbjct: 234 MELLEAMKK 242


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 164/496 (33%), Positives = 257/496 (51%), Gaps = 9/496 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI    +   ++EA+ +  ++E     P    C  L++GL K G+ D   E  E M 
Sbjct: 36  YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G  ADVV YG LI   C  G++ +   LFDEM+ KGI   VV Y+ L+HGLC   +  
Sbjct: 96  KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 155

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA ++  +M E G+ P++ TY  L+DG CK      A++  + M+    +P+ VT+ VL+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-- 289
            GLCK G +  A      M + G   ++  YN L+ G C  G + EA+ L + M   E  
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 275

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+VFT+N+LI GLC  G+L  A  + +KM K+G   N+VTYN L+ G  K G +++A+
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  Q+ + G  PN  T+S LIDG CK   ++ A GL+ EM    L P +  +  L+  L
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G++++   L++EM  A   P + + +++I G  K G       F  E   K      
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGL 451

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ + ++ +I  L   G++ +A      M +    PD   Y ++L+GL       +++ 
Sbjct: 452 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 511

Query: 530 LLADMIKMGIVPDAVI 545
           LL  M   G V D  I
Sbjct: 512 LLHQMAAKGTVLDRKI 527



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 159/477 (33%), Positives = 254/477 (53%), Gaps = 6/477 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +L GL + G          EM    +  D+V+Y  LI+  C    + +A+ L  EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P  V  T L+ GLC + +M EA  +  +M++ G   ++  Y  L+ G+C   +++R
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
             E + EML   +  NVVT+  L+ GLC++G+ + A      MA+ G+ P++  Y  LID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G    AM L + M +    P   TYN+L+ GLC  G +  A  +L+ M ++G  A
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQM--TEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           +VVTYN+L+ G C +G +++AL + + M   E  +EPNV TF+ LI G CK G +  A+ 
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           ++ +MV K    ++V +  L+ G  K G +KE + L+K++L+    P+ FT S LI G  
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   ++ A   F E   +T G   +P    Y  ++ +LC +G + +A  LF +M + N  
Sbjct: 362 KMRMLNIAKGLFCEM--RTHG--LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           PD  ++ TM+ G L+A     V  L   M++MG+ PDA+    ++    + G+L  A
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 245/498 (49%), Gaps = 9/498 (1%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G + EA+ + R++    V P I + N L+NGL K  K         EM   G   + VT 
Sbjct: 12  GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 71

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             L+D  C  G + +A+ L + M  KG +  VV+Y  LI G CN   +   + +F  M  
Sbjct: 72  TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  N+ TY+ L+ G C++     A    + M  H + P+VVT+  L+DGLCK G    
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A +    M + G  P+   YN L+ G CK G + +A  +   M +     DV TYN L+K
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251

Query: 303 GLCGVGQLEGAEGLLQKMY--KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           GLC  G+++ A  L   M+  +  +  NV T+N LI G CKEG + KA+ +  +M +KG 
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 311

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
             N+VT++ L+ G  KAG I  AM L+ +++    VP+   ++ LIDG  K   +     
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 371

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+ EM    + P++F  ++L+  L K G +  A + F E  +      C P+ + +  +I
Sbjct: 372 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN----CEPDIISFNTMI 427

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
                 G      +L   M    LRPD  T++T++  L +   + +    L  M+  G  
Sbjct: 428 DGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 487

Query: 541 PDAVINQVMVRGYQENGD 558
           PDA++   +++G    GD
Sbjct: 488 PDALVYDSLLKGLSSKGD 505



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 232/454 (51%), Gaps = 11/454 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L +++   F+  V  + TLI  F   G+++    ++ ++    +   +   + L++GL +
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G++         M   G+  DVVTY  LID  C  G    A++L + M++KG EP+ V 
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +L+ GLC E  +++A  + R M E G   ++ TYN LM G C    V+ AL+ ++ M 
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 217 HHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
            +   L+PNV TF +L+ GLCK G L  A      M K G   N+  YN L+ G  KAG 
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EAM L  ++      P+ FTY+ILI G C +  L  A+GL  +M   G+   +  YN+
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+   CKEG +E+A S+  +M     EP++++F+++IDG  KAG+      L  +MV   
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD + F+ LI+ LSK G + E     + M+ +  TP      SL+ GL   G  +  +
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 510

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           N   +   K        +  + + I+  LC+  Q
Sbjct: 511 NLLHQMAAKGT----VLDRKIVSTILTCLCHSIQ 540



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 10/270 (3%)

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           NI++KGLC  G +  A GL+++M ++ +  ++V+YN+LI+G CK   +++A+ +  +M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  PN VT ++L+DG CK G +D AM L   M  K    DVV++  LI G   +GN+  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHV 474
              L+ EML   I+ +V T S L+HGL + G+   A   LN   E           P+ V
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG-------IHPDVV 174

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I  LC DG+   A  L + M      P N TY  +L GL +   ++D   +L  M
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           I+ G   D V    +++G  + G +  A +
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALK 264



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 8/320 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE-----VLPAIQACNALLNGLIKKGKFDSV 103
           K +   ++TL+    + G ++EAL ++  +      + P +   N L+ GL K+G+    
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            + + +MV  G   ++VTY +L+  C   G + +A+ L+ +++D G  P    Y+ILI G
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C    +  A+ +F  MR  G+ P L+ YN LM   CK   + +A   + EM + N +P+
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +++F  ++DG  K G+ +      + M + G+ P+   ++ LI+   K G L EA S   
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC--- 340
            M     +PD   Y+ L+KGL   G       LL +M  +G + +    ++++   C   
Sbjct: 480 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSI 539

Query: 341 KEGDMEKALSVCSQMTEKGV 360
           +E D+ + L    Q T +G 
Sbjct: 540 QEVDVMELLPTFFQGTSEGA 559



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 52/93 (55%)

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +++ LC +G + +A  L  +M   ++ PD  +Y T++ GL +AK++ + + LL +M   G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             P++V    ++ G  ++G +  A    E +K+
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK 96


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 269/505 (53%), Gaps = 7/505 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +S+    F     +++A+ ++ ++      P     N +L  L+K   + +V  
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++M   G+  ++V   +LI+C C  G +  A ++F +++  G  P  + +T L  GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ +A      +   G   +  +Y  L+ G CKV +   AL+    +  + +QPNVV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++D +CKV  +  A + F  M   G+ P++  Y+ LI G C  G L +A+ L ++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I PDV+T+NIL+   C  G+++  + +   M K+GI  N VTYNSL+DGYC   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA S+ + M + GV P++ ++S +I+G CK    D AM L+ EM  K+++PDVV +++L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDGLSK G +   L+L  +M +  + P++ T +S++  L K  ++  A+    +  DK  
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK-- 464

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G+  P+   Y+ +I+ LC  G++  A K+F D+       D   YT M++G        
Sbjct: 465 -GF-QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522

Query: 526 DVMMLLADMIKMGIVPDAVINQVMV 550
           + + LL+ M   G +PDA   ++++
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIII 547



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 256/481 (53%), Gaps = 13/481 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI--- 78
           +L+KS+  H V Y        +E     P++ +   LI  F ++G I  A  V+ KI   
Sbjct: 94  SLVKSKHYHTVLY----LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM 149

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
             +P       L  GL  KG+    + F++++V  G   D ++YG LI   C  G+   A
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+L   +    ++P VV+Y  +I  +C    + EA  +F  M   G+ P++ TY+AL+ G
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISG 269

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C +  +  A++ +++M+  N++P+V TF +L++  CK G+++     F  M K G+ PN
Sbjct: 270 FCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              YN L+DG+C    + +A S+ + M +  ++PD+ +Y+I+I G C + + + A  L +
Sbjct: 330 FVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M+++ I+ +VVTY+SLIDG  K G +  AL +  QM ++GV PN+ T++S++D  CK  
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTH 449

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A+ L T+   K   PD+  ++ LI GL + G +++  ++++++L       V+  +
Sbjct: 450 QVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 509

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +I G    G  + AL        K +   C P+   Y  II +L    +   A KL  +
Sbjct: 510 IMIQGFCVEGLFNEALALL----SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565

Query: 499 M 499
           M
Sbjct: 566 M 566



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/416 (34%), Positives = 226/416 (54%), Gaps = 4/416 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L L  +M  +GI+P +V   ILI+  C    +  A S+F  + + G VP+  T+  L  
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK 163

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C    + +A  F+ +++      + +++G L+ GLCKVGE RAA +    +    V P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +ID  CK   + EA  L SEM    ISPDV TY+ LI G C +G+L+ A  L 
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM  E I  +V T+N L++ +CK+G M++  +V   M ++G++PN VT++SL+DG C  
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ++ A  ++  M    + PD+  ++ +I+G  K     E + L+KEM    I P V T 
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI GL K+GRIS AL    +  D+       PN   Y +I+ ALC   Q+ KA  L +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRG----VPPNICTYNSILDALCKTHQVDKAIALLT 459

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             +    +PD  TY+ +++GL ++ ++ D   +  D++  G   D     +M++G+
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 204/380 (53%), Gaps = 3/380 (0%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+   + TLI    ++G    AL + ++++   V P +   N +++ + K    +  ++ 
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EMV  G+  DVVTY  LI   C  G +  A++LF++MI + I+P V  + IL++  C 
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + KM E +++F  M + G+ PN  TYN+LMDGYC V +VN+A   ++ M    + P++ +
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + ++++G CK+ +   A N F  M +  + P++  Y+ LIDG  K+G +  A+ L  +M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P++ TYN ++  LC   Q++ A  LL K   +G   ++ TY+ LI G C+ G +E
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  V   +  KG   +V  ++ +I G C  G  + A+ L ++M     +PD   +  +I
Sbjct: 488 DARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 407 DGLSKDGNMKETLRLYKEML 426
             L K        +L +EM+
Sbjct: 548 LSLFKKDENDMAEKLLREMI 567



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 19/253 (7%)

Query: 13  NARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEE 70
           +  CL+K+V +             S+FN +    +   NP +  +S +I  F ++   +E
Sbjct: 338 DGYCLVKEVNK-----------AKSIFNTMAQGGV---NPDIQSYSIMINGFCKIKKFDE 383

Query: 71  ALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
           A+ +++++    ++P +   ++L++GL K G+     +  ++M   G+  ++ TY  ++D
Sbjct: 384 AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILD 443

Query: 128 CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
             C    V KA+ L  +  DKG +P +  Y+ILI GLC   K+ +A  +F  +   G   
Sbjct: 444 ALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNL 503

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++Y Y  ++ G+C     N AL    +M  +   P+  T+ +++  L K  E   A    
Sbjct: 504 DVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLL 563

Query: 248 VHMAKFGVFPNIF 260
             M   G+  N +
Sbjct: 564 REMIARGLPLNFY 576


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 253/495 (51%), Gaps = 22/495 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++ L+  + +MG ++EA  V     +  +LP +   N L+NGL  +G+ +  ++  
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    L+ DVV+Y  LI+ C     + +A  L +EM +KG++P  V + I++   C E
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM +A +    M E G  P+  TYN L++GYCK  ++  A     EM   N++ + VT 
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC+  +L  A        K G F +   Y  LI G+ K GN+  A+ L  EM++
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EI P   TYN +I GLC  G+ E A   L ++ + G+L +  TYN+++ GYC+EGD+EK
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M E   +P+V T + L+ G C  G ++ A+ L+   V K    D V +  LI 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKT 464
            L K+G + +   L  EM E ++ P  +T +++I  L  +GRI  A  F    LEK +  
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696

Query: 465 DG----------------GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           D                      + V Y+  I+ LC +G+   A ++F + +   +  D 
Sbjct: 697 DQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDK 756

Query: 509 CTYTTMLRGLLRAKR 523
            TY  ++ GL++ ++
Sbjct: 757 STYINLMDGLIKRRK 771



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 283/557 (50%), Gaps = 14/557 (2%)

Query: 24  NLLKSRKPHHVCYS--VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKI 78
           +L++    H V +S   FN    L I   N + F+ +I  +      ++A   L V  K 
Sbjct: 179 SLVRYPSSHSVSFSREAFNDAIKLGIVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
              P     N +L+ L KKG+     +   +M   GL+ +  TY +L+   C  G + +A
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            N+ + M    + P V  Y +LI+GLCNE ++ EA  +   M    ++P++ +YN L++G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             + + ++ A +   EM    ++PN VT  +++   CK G++  A N    M + G  P+
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD 417

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              YN LI+G+CKAGN+ EA     EM +  +  D  T N +++ LC   +LE A  LL 
Sbjct: 418 CVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
              K G   + V+Y +LI GY K+G++++AL +  +M EK + P+ VT++ +I G C+ G
Sbjct: 478 SARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCG 537

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A+    E++   L+PD   +  ++ G  ++G++++  + + +M+E    P VFT +
Sbjct: 538 KTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+ GL   G +  AL  F     K      + + V Y  +I +LC +G++  A  L S+
Sbjct: 598 ILLRGLCMEGVLEKALKLFNTWVSKGK----AIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI----NQVMVRGYQ 554
           M    L PD+ TY  ++  L  + R+ +    ++ M++ G +PD V+    N+ +V    
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSET 713

Query: 555 ENGDLKSAFRCSEFLKE 571
                 S+   SE++KE
Sbjct: 714 SEESDSSSVAYSEWIKE 730



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 262/543 (48%), Gaps = 16/543 (2%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
           L+ L +   + ++  T I A+ + G    A  +++K++ L   P +  CN LLN L++  
Sbjct: 125 LSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYP 184

Query: 99  KFDSV---WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
              SV    E + + +  G+V +V T+ ++I   C +     A+   + M      P  V
Sbjct: 185 SSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNV 244

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  ++  LC + ++ +A  +   M+  G++PN  TYN L+ GYCK+  +  A      M
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
             +NL P+V T+ +L++GLC  G +  A      M    + P++  YN LI+G  +   +
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM +  + P+  T+NI++K  C  G+++ A   + KM + G   + VTYN+L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+GYCK G+M +A     +M  K ++ + VT ++++   C+   ++ A  L +    +  
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA-- 453
             D V +  LI G  KDGN+   L+L+ EM E +I PS  T + +I GL + G+   A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 454 -LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            LN  LE           P+   Y  I+   C +G + KA +  + M  ++ +PD  T  
Sbjct: 545 KLNELLESG-------LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +LRGL     +   + L    +  G   D V    ++    + G L  AF     ++E 
Sbjct: 598 ILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657

Query: 573 RIG 575
            +G
Sbjct: 658 ELG 660


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 246/488 (50%), Gaps = 11/488 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N +++G  K+GK       Y EM+  G V DVVT+  +I+  C    V  A  L
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M+D G+ P  V YT +IHG     +  EA  MFR M   G++P++ ++N+ MD  CK
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A E ++ M     +PN+VT+G+L+ G    G      +FF  M   G+  N  V
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +  LID + K G + EAM + SEM+   +SPDVFTY+ LI  LC +G+L  A     +M 
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNI 380
             G+  N V Y+SLI G+C  GD+ KA  +  +M   G+  PN+  F+S++   CK G +
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  ++  +       D+++F  LIDG    G M +   +   M+ A I P  FT ++L
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++G FK+GRI + LN F E +DK       P  V Y  I+  L   G+ + A K+  +M 
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKK----IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-----VPDAVINQV-MVRGYQ 554
                    TY  +L+GL R     + +++   +  M +       + +IN +  V+  +
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589

Query: 555 ENGDLKSA 562
           E  DL SA
Sbjct: 590 EAKDLFSA 597



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 227/496 (45%), Gaps = 6/496 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN- 140
           P I     ++NG  +  + +    F+  ++  GL AD      ++ C C       A+  
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVV-PNLYTYNALMDG 198
           L   M + G  P    Y I++  LC++N+  +A  + R M +E GV  P++ TYN ++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K   + +A   YHEM+     P+VVT   +++ LCK   +  A      M   GV PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              Y  +I G+   G   EA  +  EM    + PD+ ++N  +  LC  G+ + A  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G   N+VTY  L+ GY  EG     +S  + M   G+  N + F+ LID   K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D AM + +EM  + L PDV  ++ LI  L + G + + +  + +M+   + P+     
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SLI G   +G +  A     E  +    G   PN   + +I+ ++C +G+++ A  +F  
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNN---GIPRPNIAFFNSIVHSICKEGRVMDAHHIFDL 422

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           ++    R D   + T++ G      M     +L  MI  GI PD      +V GY ++G 
Sbjct: 423 VKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGR 482

Query: 559 LKSAFRCSEFLKESRI 574
           +         + + +I
Sbjct: 483 IDDGLNLFREMSDKKI 498



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 231/488 (47%), Gaps = 47/488 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++++I  +S +G  EEA  ++R++    ++P I + N+ ++ L K G+     E +
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G   ++VTYG+L+     +G     ++ F+ M   GI    +++TILI      
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M EA  +   M+  G+ P+++TY+ L+   C++  +  A++ +++M+   +QPN V +
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             L+ G C  G+L  A      M   G+  PNI  +N ++   CK G + +A  +   ++
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D+  +N LI G C VG++  A  +L  M   GI  +  TYN+L++GY K G ++
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
             L++  +M++K ++P  VT++ ++DG  +AG   AA  +  EM+       +  +  ++
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544

Query: 407 DGLSKDGNMKETLRLYKEML-------------------------EAK----------IT 431
            GL ++    E + +++++                          EAK          + 
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLV 604

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           P+  T   +I  L K G +  A N F  +EK+       C+P   L    I+ L   G+I
Sbjct: 605 PNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG------CAPCSRLLNDTIRTLLEKGEI 658

Query: 490 LKASKLFS 497
           +KA    S
Sbjct: 659 VKAGNYMS 666



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 184/365 (50%), Gaps = 5/365 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           S FN +    I   N  VF+ LI A+++ G ++EA+ +  +++   + P +   + L++ 
Sbjct: 277 SFFNTMKGDGIVA-NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISA 335

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EP 152
           L + G+     + + +M+  G+  + V Y  LI   C  GD++KA  L  EM++ GI  P
Sbjct: 336 LCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP 395

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            +  +  ++H +C E ++++A  +F  +++ G   ++  +N L+DGYC V ++ +A    
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M+   + P+  T+  L++G  K G +    N F  M+   + P    YN ++DG  +A
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G    A  +  EM     +  + TYNI++KGLC     + A  + QK+    +  N+ T 
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTL 575

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++I+        E+A  + S +++ G+ PN  T+  +I    K G+++ A  +++ M  
Sbjct: 576 NTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEK 635

Query: 393 KSLVP 397
               P
Sbjct: 636 SGCAP 640



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 3/236 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+TLI  +  +G + +A  V   +    + P     N L+NG  K G+ D     + EM
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM 493

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +    VTY +++D     G  + A  +  EMI  G   ++  Y I++ GLC  N  
Sbjct: 494 SDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCT 553

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  MF+ +    V  N+ T N +++    V     A + +  +    L PN  T+G++
Sbjct: 554 DEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIM 613

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L K G +  A N F  M K G  P   + N  I    + G + +A +  S+++
Sbjct: 614 IRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVD 669


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/476 (34%), Positives = 262/476 (55%), Gaps = 10/476 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +FS LI   S++G +E+A  +Y +++++   P +   N+LL G  ++   +  +  ++E 
Sbjct: 362 IFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA 421

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G + +VVTY +L+      G V +A NL+++M+ KGI P++V Y  LI G C +  M
Sbjct: 422 VEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCM 480

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A SM +S+ E G+ PN  TY  L+DG+ K  D  RA   + +M+  N+ P   TF  +
Sbjct: 481 DKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTV 540

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GL K G +    +   +  K G       YN +IDG  K G +  A+    EM +  I
Sbjct: 541 INGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGI 600

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV TY  LI GLC   ++  A  +   M  +G+  +VV Y++LIDG+CK  DME A  
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGL 409
             +++ + G+ PN V ++S+I G     N++AA+ L+ EM IK+ VP D+ V+T++I GL
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM-IKNKVPCDLQVYTSIIGGL 719

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G +   L LY EML   I P +   + LI+GL  NG++ NA     E     DG   
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE----MDGNNI 775

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           +P+ ++Y  +I     +G + +A +L  +M    L PD+ TY  ++ G L+    L
Sbjct: 776 TPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTL 831



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 283/562 (50%), Gaps = 43/562 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           +  VF+ L+ +F  +  I +A+  +R +   +++P +   N LL  ++++       + Y
Sbjct: 149 DSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  G+  D  T  V++  C  +G   +    F E   +G+E     Y+IL+  +C  
Sbjct: 209 DEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRR 268

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNA--------------------------------- 194
             +  A  + + MRE G VP+  TY A                                 
Sbjct: 269 LDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVT 328

Query: 195 --LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             LM GYC + DVN AL+ + E++   + P+VV F VL++G  KVG++  A   +  M  
Sbjct: 329 RSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKL 388

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN+F+ N L++G  +   L  A  L  E  +  I+ +V TYNIL+K L  +G++  
Sbjct: 389 MGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNE 447

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L +KM  +GI  ++V+YN+LI G+CK+G M+KA S+   + E+G++PN VT++ LID
Sbjct: 448 ACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLID 507

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  K G+ + A  ++ +M+  ++ P    F  +I+GL K G + ET       ++     
Sbjct: 508 GFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVS 567

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T +S+I G FK G + +AL  + E  +       SP+ + Y ++I  LC   +I  A
Sbjct: 568 TSITYNSIIDGFFKEGAVDSALLAYREMCESG----ISPDVITYTSLIDGLCKSNKIGLA 623

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ SDM+   ++ D   Y+ ++ G  +   M        +++ +G+ P+ V+   M+ G
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
           +    ++++A    + + ++++
Sbjct: 684 FIHLNNMEAALNLHQEMIKNKV 705



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 270/530 (50%), Gaps = 40/530 (7%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           E L   R+   +P+     A++   +K+G F       +EMV  GL  +V+    L+   
Sbjct: 276 ELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGY 335

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  GDV  AL LFDE+++ G+ P VVI+++LI+G      M +A  ++  M+  G+ PN+
Sbjct: 336 CVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNV 395

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           +  N+L++G+ +   +  A   + E + H +  NVVT+ +L+  L ++G++  A N +  
Sbjct: 396 FIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEK 454

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS-------------------------- 283
           M   G+ P++  YN LI GHCK G + +A S+                            
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD 514

Query: 284 ---------EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
                    +M    I+P   T+N +I GL   G++   +  L    K+G ++  +TYNS
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNS 574

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +IDG+ KEG ++ AL    +M E G+ P+V+T++SLIDG CK+  I  A+ ++++M  K 
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  DVV ++ALIDG  K  +M+   + + E+L+  +TP+    +S+I G      +  AL
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL 694

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           N   E            +  +Y +II  L  +G++  A  L+S+M S ++ PD   YT +
Sbjct: 695 NLHQEMIKNK----VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + GL    ++ +   +L +M    I P  ++  +++ G    G+L+ AFR
Sbjct: 751 INGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 230/492 (46%), Gaps = 15/492 (3%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLC----GLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           LLN  +      S   F E ++ C    G  +D   +  L+        +  A+  F  M
Sbjct: 117 LLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTM 176

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           ++  + P V I   L+  +   N + +A  ++  M E G+  + YT + +M    K    
Sbjct: 177 LEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKF 236

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
               +F+ E     L+ +   + +L+  +C+  +L  A      M +FG  P+   Y  +
Sbjct: 237 EEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAV 296

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I    K GN  EA+ L  EM    +  +V     L+KG C +G +  A  L  ++ + G+
Sbjct: 297 IVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGV 356

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + +VV ++ LI+G  K GDMEKA  + ++M   G++PNV   +SL++G  +   ++ A G
Sbjct: 357 VPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG 416

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ E V +  + +VV +  L+  L + G + E   L+++M+   ITPS+ + ++LI G  
Sbjct: 417 LFDEAV-EHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 446 KNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           K G +  A   L   LE+  K       PN V Y  +I      G   +A  +F  M + 
Sbjct: 476 KKGCMDKAYSMLKSILERGLK-------PNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA 528

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           N+ P + T+ T++ GL +  R+ +    L + IK G V  ++    ++ G+ + G + SA
Sbjct: 529 NIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSA 588

Query: 563 FRCSEFLKESRI 574
                 + ES I
Sbjct: 589 LLAYREMCESGI 600



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 227/487 (46%), Gaps = 27/487 (5%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVE----------- 172
           L+     + +   AL  F ++  K G   TV   ++LIH L + +K              
Sbjct: 64  LVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVF 123

Query: 173 ------AESMFRSMREC----GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
                 A+     + EC    G   +   +N L+  + +V  +  A+E +  ML H+L P
Sbjct: 124 GDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVP 183

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
            V     L+  + +   +  A   +  M + G++ + +  + ++    K G   E     
Sbjct: 184 WVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFF 243

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            E +   +  D   Y+IL++ +C    L  A  LL++M + G + +  TY ++I    K+
Sbjct: 244 KEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQ 303

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G+  +AL +  +M   G+  NV+   SL+ G C  G+++ A+ L+ E+V   +VPDVV+F
Sbjct: 304 GNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIF 363

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + LI+G SK G+M++   LY  M    I P+VF V+SL+ G  +   + +A   F E  +
Sbjct: 364 SVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE 423

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                +   N V Y  +++ L   G++ +A  L+  M S  + P   +Y  ++ G  +  
Sbjct: 424 -----HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKG 478

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
            M     +L  +++ G+ P+AV   +++ G+ + GD + AF   E +  + I  ++   +
Sbjct: 479 CMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFN 538

Query: 583 TTRSFLG 589
           T  + LG
Sbjct: 539 TVINGLG 545



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 3/262 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++++I  F + G ++ AL  YR++    + P +    +L++GL K  K     E + +M 
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  DVV Y  LID  C   D+  A   F E++D G+ P  V+Y  +I G  + N M 
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A ++ + M +  V  +L  Y +++ G  K   ++ AL+ Y EML  ++ P++V + VL+
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GL   G+L  A      M    + P++ VYN LI G+ + GNL EA  L  EM    + 
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811

Query: 292 PDVFTYNILIKGLCGVGQLEGA 313
           PD  TY+IL+ G   V    G 
Sbjct: 812 PDDTTYDILVNGKLKVSHTLGG 833


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 255/472 (54%), Gaps = 8/472 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N ++FS LI   S++G++E+A  +Y +++ +   P +   N LL G  K+   ++ +   
Sbjct: 361 NVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLL 420

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +  V  G +A VVTY +++   C  G V +A NL+D+MI KGI P++V Y  +I G C +
Sbjct: 421 DGAVENG-IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKK 479

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M +A  +   + E G+ PN  TY  LM+G  K  D   A   + +M+   + P   TF
Sbjct: 480 GCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTF 539

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GLCKVG +  A +      K    P    YNC+IDG+ K G +  A S+  EM +
Sbjct: 540 NSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCR 599

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EISP+V TY  LI G C   +++ A  +   M ++G+  ++  Y +LI G+CK  DME 
Sbjct: 600 SEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMEN 659

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    S++ E G+ PN + ++ +I       N++AA+ L+ EM+   +  D+ ++T+LID
Sbjct: 660 ACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLID 719

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+G +   L LY EML   I P +F  + LI+GL  +G++ NA     E     DG 
Sbjct: 720 GLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE----MDGN 775

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +P  +LY  +I     +G + +A +L  +M    L PD+ TY  ++ G L
Sbjct: 776 NITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 264/536 (49%), Gaps = 41/536 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I A   +G+  EAL +  ++    V   +    +L+ G   +G  +S    ++E+
Sbjct: 294 TYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG------- 163
           V  G+  +V  + VLI+ C   G+V KA  L+  M   G++PTV I   L+ G       
Sbjct: 354 VEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLL 413

Query: 164 ---------------------------LCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
                                      LC   K+ EA +++  M   G+ P+L +YN ++
Sbjct: 414 ENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+CK   ++ A E  + ++   L+PN +T+ +LM+G  K G+   A N F  M   G+ 
Sbjct: 474 LGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P  + +N +I+G CK G + EA    +   K    P   TYN +I G    G ++ AE +
Sbjct: 534 PTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESV 593

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M +  I  NV+TY SLI+G+CK   M+ AL +   M  KG+E ++  +++LI G CK
Sbjct: 594 YREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCK 653

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
             +++ A   +++++   L P+ +V+  +I       NM+  L L+KEM+  KI   +  
Sbjct: 654 MQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKI 713

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI GL K G++S AL+ + E   +       P+  +Y  +I  LC  GQ+  A K+ 
Sbjct: 714 YTSLIDGLLKEGKLSFALDLYSEMLCRG----IVPDIFMYNVLINGLCNHGQLENAGKIL 769

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +M  +N+ P    Y T++ G  +   + +   L  +M+  G+VPD     ++V G
Sbjct: 770 KEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 273/555 (49%), Gaps = 35/555 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+ L+I++     I EA+  +R +    V+P +   N LL  +I++   +     ++EM
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  T  VL+  C   G  ++A   F +   +G++     Y+I+I  +C  + +
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDL 273

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +     E G VP+  TY A++    ++ +   AL    EM+   +  NV     L
Sbjct: 274 DLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSL 333

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C  G++ +A   F  + + GV PN+ +++ LI+   K GN+ +A  L + M+   +
Sbjct: 334 IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P VF  N L+KG      LE A  LL    + GI A+VVTYN ++   C+ G + +A +
Sbjct: 394 QPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACN 452

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG+ P++V+++ +I G CK G +D A  +   ++   L P+ + +T L++G  
Sbjct: 453 LWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSF 512

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKT------ 461
           K G+ +    ++ +M+ A I P+ +T +S+I+GL K GR+S A   LN F++++      
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572

Query: 462 ---------------DKTDGGY-------CSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                          D  +  Y        SPN + Y ++I   C   ++  A K+  DM
Sbjct: 573 TYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM 632

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +   L  D   Y T++ G  + + M +     + ++++G+ P+ ++  +M+  Y+   ++
Sbjct: 633 KRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNM 692

Query: 560 KSAFRCSEFLKESRI 574
           ++A    + +  ++I
Sbjct: 693 EAALNLHKEMINNKI 707



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 188/425 (44%), Gaps = 6/425 (1%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           ++  L+      NK+ EA   FR+M E GVVP +   N L+    +   V  A   + EM
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               +  +  T  VLM    K G+   A  +F   A  G+  +   Y+ +I   C+  +L
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDL 273

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  L    E+    P   TY  +I     +G    A  L  +M    +  NV    SL
Sbjct: 274 DLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSL 333

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I GYC  GD+  AL +  ++ E GV PNV  FS LI+   K GN++ A  LYT M    L
Sbjct: 334 IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P V +   L+ G  K   ++    L    +E  I  SV T + ++  L + G+++ A N
Sbjct: 394 QPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACN 452

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            +    DK  G   +P+ V Y  +I   C  G +  A ++ + +    L+P+  TYT ++
Sbjct: 453 LW----DKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILM 508

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF-RCSEFLKESRI 574
            G  +         +   M+  GIVP       ++ G  + G +  A  + + F+K+S I
Sbjct: 509 EGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI 568

Query: 575 GSSET 579
            +S T
Sbjct: 569 PTSMT 573


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/473 (32%), Positives = 261/473 (55%), Gaps = 12/473 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  ++ TLI + S+   + EAL +  ++ ++   P  +  N ++ GL K  + +   +  
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M++ G   D +TYG L++  C  G V  A +LF  +     +P +VI+  LIHG    
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTH 366

Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ +A+++   M    G+VP++ TYN+L+ GY K   V  ALE  H+M +   +PNV +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+DG CK+G++  A N    M+  G+ PN   +NCLI   CK   + EA+ +  EM 
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    PDV+T+N LI GLC V +++ A  LL+ M  EG++AN VTYN+LI+ + + G+++
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + ++M  +G   + +T++SLI G C+AG +D A  L+ +M+     P  +    LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL + G ++E +   KEM+    TP + T +SLI+GL + GRI + L  F     K   
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQA 662

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
               P+ V +  ++  LC  G +  A  L  +   D   P++ T++ +L+ ++
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 249/509 (48%), Gaps = 11/509 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L  L+           + +M+   +   + T+GV++   C   ++  AL+L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  VIY  LIH L   N++ EA  +   M   G VP+  T+N ++ G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +N A +  + ML     P+ +T+G LM+GLCK+G + AA + F  + K    P I +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +N LI G    G L +A ++ S+M   + I PDV TYN LI G    G +  A  +L  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   NV +Y  L+DG+CK G +++A +V ++M+  G++PN V F+ LI   CK   I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ ++ EM  K   PDV  F +LI GL +   +K  L L ++M+   +  +  T ++L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSP-NHVLYAAIIQALCYDGQILKASKLFSDM 499
           I+   + G I  A     E   +      SP + + Y ++I+ LC  G++ KA  LF  M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQG-----SPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
             D   P N +   ++ GL R+  + + +    +M+  G  PD V    ++ G    G +
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           +        L+   I       +T  S+L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 231/470 (49%), Gaps = 11/470 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RKI   P +     ++       + DS      +M   G V + V Y  LI        V
Sbjct: 211 RKIP--PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L +EM   G  P    +  +I GLC  +++ EA  M   M   G  P+  TY  L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFG 254
           M+G CK+  V+ A + ++ +     +P +V F  L+ G    G L  A      M   +G
Sbjct: 329 MNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  YN LI G+ K G +  A+ +  +M      P+V++Y IL+ G C +G+++ A 
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L +M  +G+  N V +N LI  +CKE  + +A+ +  +M  KG +P+V TF+SLI G 
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+   I  A+ L  +M+ + +V + V +  LI+   + G +KE  +L  EM+        
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI GL + G +  A + F EK  + DG   +P+++    +I  LC  G + +A +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLF-EKMLR-DGH--APSNISCNILINGLCRSGMVEEAVE 620

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              +M      PD  T+ +++ GL RA R+ D + +   +   GI PD V
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 218/473 (46%), Gaps = 39/473 (8%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           EPT   Y +++  L + N    A ++F  M    + P L+T+  +M  +C V +++ AL 
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +M  H   PN V +  L+  L K   +  A      M   G  P+   +N +I G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE------- 323
           K   + EA  + + M     +PD  TY  L+ GLC +G+++ A+ L  ++ K        
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358

Query: 324 -------------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
                                    GI+ +V TYNSLI GY KEG +  AL V   M  K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +PNV +++ L+DG CK G ID A  +  EM    L P+ V F  LI    K+  + E 
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + +++EM      P V+T +SLI GL +   I +AL  +L +   ++G     N V Y  
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL--WLLRDMISEG--VVANTVTYNT 534

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I A    G+I +A KL ++M       D  TY ++++GL RA  +     L   M++ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             P  +   +++ G   +G ++ A    EF KE  +  S  +  T  S +  L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAV---EFQKEMVLRGSTPDIVTFNSLINGL 644



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 205/443 (46%), Gaps = 11/443 (2%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G   +  +Y +LI  L    +    + +   M++ G+V     + ++M  Y K     + 
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165

Query: 209 LEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
                EM + ++ +P   ++ V+++ L      + A N F  M    + P +F +  ++ 
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C    +  A+SL  +M K    P+   Y  LI  L    ++  A  LL++M+  G + 
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +  T+N +I G CK   + +A  + ++M  +G  P+ +T+  L++G CK G +DAA  L+
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFK 446
             +      P++V+F  LI G    G + +   +  +M+ +  I P V T +SLI+G +K
Sbjct: 346 YRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G +  AL    +  +K     C PN   Y  ++   C  G+I +A  + ++M +D L+P
Sbjct: 402 EGLVGLALEVLHDMRNKG----CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRC 565
           +   +  ++    +  R+ + + +  +M + G  PD      ++ G  E  ++K A +  
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517

Query: 566 SEFLKESRIGSSETEGHTTRSFL 588
            + + E  + ++ T      +FL
Sbjct: 518 RDMISEGVVANTVTYNTLINAFL 540



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 5/301 (1%)

Query: 52  PSVFSTLII--AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V+S  I+   F ++G I+EA  V  ++    + P     N L++   K+ +     E 
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G   DV T+  LI   C   ++  AL L  +MI +G+    V Y  LI+    
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA  +   M   G   +  TYN+L+ G C+  +V++A   + +ML     P+ ++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             +L++GLC+ G +  A  F   M   G  P+I  +N LI+G C+AG + + +++  +++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PD  T+N L+  LC  G +  A  LL +  ++G + N  T++ L+     +  ++
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721

Query: 347 K 347
           +
Sbjct: 722 R 722


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/505 (32%), Positives = 263/505 (52%), Gaps = 12/505 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++++I A  + G++ +A  +  K+    + P      +++ G  +    DS +E +  M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +  TY  LI+  C  G V +AL+   EM   G+ PTV  +T  I  LC+  ++
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRI 349

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR-ALEFYHEMLHHNLQPNVVTFGV 229
            +A  +F  M++ G  PN+YTY +L+ G      V+R A+  +H M    + PN VT+  
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTYNA 405

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           LM+ L +  E+ +A   F  M K G  PN   YN LI G+C  G+  +AMS+ + M K  
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            +P + TYNI+IKG C  G  + A  +L+ M   G   +  +Y  LI G+CK   ME A 
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++M ++G+ PN VT+++LI G CK   +D A  +   M      P+V  +  LI GL
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           +K  N      L K MLE KI+P V T S++I+GL  NG I  AL  F    +K     C
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF----NKMVKHGC 641

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y+++IQAL  +G++ +A ++FS+++   L PD  TY  M+   + + ++     
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQ 554
            L +MI  G  P      V+++G Q
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQ 726



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 241/532 (45%), Gaps = 33/532 (6%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           + +FN ++  E  + N + +STLI      G + EAL    ++    VLP +    A + 
Sbjct: 283 FEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L   G+ +  W+ + +M   G   +V TY  LI    GQ     A+ LF  M   G+ P
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS---GQRVSRMAIGLFHRMSRDGVVP 398

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V Y  L++ L    ++  A  +F  M + G +PN  +YN L+ GYC + D  +A+   
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             ML     P +VT+ +++ G C  G+   A      M   G  P+ + Y  LI G CK 
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKI 518

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             +  A  + +EM    + P+  TY  LI G C   +L+ A  +L++M + G   NV TY
Sbjct: 519 SKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY 578

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N LI G  K+ +   A  +C  M E+ + P+VVT+S++I+G C  G I  A+ ++ +MV 
Sbjct: 579 NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
              +P++  +++LI  L ++G ++E   ++ E+ +  + P   T   +I     +G++  
Sbjct: 639 HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDR 698

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL-------------------CYDGQILKA- 492
           A +F  E  +      C P    Y  +I+ L                    +D QI+   
Sbjct: 699 AFDFLGEMIN----AGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKD 754

Query: 493 --SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
             S L S +   +       Y  +L  L R+ R  +   L   M+     P+
Sbjct: 755 VISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 221/465 (47%), Gaps = 36/465 (7%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P     NAL+N L++  + DS    +  M   G + +  +Y  LI   C  GD  KA+
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           ++   M+     PT+V Y I+I G C+      A  +   M+  G  P+ ++Y  L+ G+
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK++ +  A   ++EM+   L PN VT+  L+ G CK  +L  A      M + G  PN+
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LI G  K  N   A  LC  M + +ISPDV TY+ +I GLC  G +  A  +  K
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K G L N+ TY+SLI    +EG +E+A  + S++ ++G+ P+ VT+  +I+    +G 
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT--PSVFTV 437
           +D A     EM+     P +  +  LI GL              EM+  K+   P+  + 
Sbjct: 696 VDRAFDFLGEMINAGCQPTLQTYDVLIKGLQ------------NEMVYHKLVALPNAAST 743

Query: 438 SSLIHGLFKNGRIS------NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           S+    +     IS        L+F L +              LY A++  L   G+  +
Sbjct: 744 STFDDQIINKDVISVLSSKLAELDFELSRQ-------------LYDALLSRLSRSGRWFE 790

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM---LDVMMLLAD 533
           A+ L+  M S +  P+  TY   L  LLRA ++   +DV   ++D
Sbjct: 791 ANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSD 835



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 211/471 (44%), Gaps = 36/471 (7%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +I  C  + ++ +ALN  D    +G +  +  YT L+  L   N        +  +   G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + PNL  YN++++  CK  +V  A    +++    ++P+  T+  ++ G C+  +L +A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M + G  PN   Y+ LI+G C +G + EA+   SEM +  + P V T+   I  L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY-------------CKEG-------- 343
           C +G++E A  +   M K+G   NV TY SLI G               ++G        
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 344 -----------DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
                      +++ AL V + M + G  PN  +++ LI G C  G+ + AM + T M+ 
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               P +V +  +I G    G+    +R+ + M      P  ++ + LI G  K  ++  
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A   F E  D+   G C PN V Y A+I   C D ++  A+++   M+    RP+  TY 
Sbjct: 524 ASGMFNEMMDR---GLC-PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++ GL +         L   M++  I PD V    ++ G   NG +  A 
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 7/413 (1%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I    N+ +M +A +      + G    L+TY  L+    K+   +  ++ YH++L   
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           LQPN++ +  +++ LCK G +R A +    + K G+ P+ F Y  +I G+C+  +L  A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + + M++    P+  TY+ LI GLC  G++  A   + +M + G+L  V T+ + I   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G +E A  +   M +KG +PNV T++SLI GQ  +     A+GL+  M    +VP+ 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNT 400

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + AL++ L ++  +   L ++  M +    P+  + + LI G    G    A++    
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                  G  +P  V Y  II+  C  G    A ++   M+++  +PD  +YT ++ G  
Sbjct: 461 MLK----GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +  +M     +  +M+  G+ P+ V    ++ GY ++  L  A R  E +K S
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS 569



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 13/328 (3%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +Q  N L++GL K+  F    E  + M+   +  DVVTY  +I+  C  G +  AL +
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F++M+  G  P +  Y+ LI  L  E ++ EAE MF  +++ G++P+  TY  +++    
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+RA +F  EM++   QP + T+ VL+ GL          N  V+  K    PN   
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL---------QNEMVY-HKLVALPNAAS 742

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            +   D       +    S  +E++ FE+S  +  Y+ L+  L   G+   A  L + M 
Sbjct: 743 TSTFDDQIINKDVISVLSSKLAELD-FELSRQL--YDALLSRLSRSGRWFEANNLYRSMV 799

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +    N  TY   +    +   ++ A+ V   M+++  E ++  +  LI   C+     
Sbjct: 800 SQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRK 859

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            A  ++ +M+ ++L  D +V+T LI+GL
Sbjct: 860 EARFVFEKMLSRALNADEIVWTILINGL 887



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 119/316 (37%), Gaps = 62/316 (19%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           K +P V  +ST+I      G I  AL ++ K+     LP +   ++L+  L ++G+ +  
Sbjct: 605 KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID--------------KG 149
            E + E+   GL+ D VTY  +I+ C   G V +A +   EMI+              KG
Sbjct: 665 EEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724

Query: 150 IEPTVV-------------------------------------------IYTILIHGLCN 166
           ++  +V                                           +Y  L+  L  
Sbjct: 725 LQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSR 784

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +  EA +++RSM      PN  TY   +    +   V+ A++ +  M     + ++  
Sbjct: 785 SGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTG 844

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+  LC++   + A   F  M    +  +  V+  LI+G   AG     M     ME
Sbjct: 845 YKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIME 904

Query: 287 KFEISPDVFTYNILIK 302
               +P      IL +
Sbjct: 905 TNRRNPSSHARTILAR 920


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/486 (31%), Positives = 258/486 (53%), Gaps = 4/486 (0%)

Query: 77   KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
            K    P+I   + LL+ + K  KFD V    E+M   G+  +  TY +LI+C C +  + 
Sbjct: 688  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747

Query: 137  KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
             AL +  +M+  G EP +V  + L++G C+  ++ EA ++   M   G  PN  T+N L+
Sbjct: 748  LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 197  DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
             G       + A+     M+    QP++VT+GV+++GLCK G+   A N    M +  + 
Sbjct: 808  HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 257  PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            P + +YN +IDG CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 317  LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            L  M +  I  +V T+++LID + KEG + +A  +  +M ++ ++P++VT+SSLI+G C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 377  AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
               +D A  ++  MV K   PDVV +  LI G  K   ++E + +++EM +  +  +  T
Sbjct: 988  HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047

Query: 437  VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             + LI GLF+ G    A   F E    +DG    PN + Y  ++  LC +G++ KA  +F
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMV--SDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103

Query: 497  SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              ++   + P   TY  M+ G+ +A ++ D   L  ++   G+ PD V    M+ G+   
Sbjct: 1104 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 1163

Query: 557  GDLKSA 562
            G  + A
Sbjct: 1164 GSKEEA 1169



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 242/436 (55%), Gaps = 4/436 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   N LL+ ++K  K+D V    ++M + G+  D+ T+ ++I+C C    V 
Sbjct: 181 KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVS 240

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL++  +M+  G EP  V    L++G C  N++ +A S+   M E G  P++  YNA++
Sbjct: 241 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 300

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D  CK   VN A +F+ E+    ++PNVVT+  L++GLC       A      M K  + 
Sbjct: 301 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 360

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN+  Y+ L+D   K G + EA  L  EM +  I PD+ TY+ LI GLC   +++ A  +
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M  +G LA+VV+YN+LI+G+CK   +E  + +  +M+++G+  N VT+++LI G  +
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG++D A   +++M    + PD+  +  L+ GL  +G +++ L ++++M + ++   + T
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +++I G+ K G++  A + F   + K       P+ V Y  ++  LC  G + +   L+
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKG----LKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 497 SDMRSDNLRPDNCTYT 512
           + M+ + L  ++CT +
Sbjct: 597 TKMKQEGLMKNDCTLS 612



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 3/401 (0%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F+TLI          EA+ +  ++      P +     ++NGL K+G  D  +   
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +M    L   V+ Y  +ID  C    +  ALNLF EM  KGI P VV Y+ LI  LCN 
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 918

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  +A  +   M E  + P+++T++AL+D + K   +  A + Y EM+  ++ P++VT+
Sbjct: 919  GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              L++G C    L  A   F  M     FP++  YN LI G CK   + E M +  EM +
Sbjct: 979  SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 1038

Query: 288  FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +  +  TYNILI+GL   G  + A+ + ++M  +G+  N++TYN+L+DG CK G +EK
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 1098

Query: 348  ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            A+ V   +    +EP + T++ +I+G CKAG ++    L+  + +K + PDVV +  +I 
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 1158

Query: 408  GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            G  + G+ +E   L+KEM E    P+    ++LI    ++G
Sbjct: 1159 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 270/571 (47%), Gaps = 61/571 (10%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           + P +  ++ +I +  +   + +A   +++IE   + P +    AL+NGL    ++    
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M+   +  +V+TY  L+D     G V++A  LF+EM+   I+P +V Y+ LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  +++ EA  MF  M   G + ++ +YN L++G+CK   V   ++ + EM    L  N 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ G  + G++  A  FF  M  FG+ P+I+ YN L+ G C  G L +A+ +  +
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+K E+  D+ TY  +I+G+C  G++E A  L   +  +G+  ++VTY +++ G C +G 
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 345 MEKALSVCSQMTEKGVEPNVVTFS-------------------------SLIDGQCKAG- 378
           + +  ++ ++M ++G+  N  T S                          +  G CK   
Sbjct: 589 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 648

Query: 379 --------------------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                                      +D A+ L+ EMV     P ++ F+ L+  ++K 
Sbjct: 649 SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM 708

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
                 + L ++M    I  + +T S LI+   +  ++  AL   L K  K   GY  PN
Sbjct: 709 NKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA-VLGKMMKL--GY-EPN 764

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V  ++++   C+  +I +A  L   M     +P+  T+ T++ GL    +  + M L+ 
Sbjct: 765 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 824

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            M+  G  PD V   V+V G  + GD   AF
Sbjct: 825 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 10/440 (2%)

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A+ LF EM+     P+++ ++ L+  +   NK     S+   M+  G+  N YTY+ L++
Sbjct: 679  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             +C+ + +  AL    +M+    +PN+VT   L++G C    +  A      M   G  P
Sbjct: 739  CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798

Query: 258  NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            N   +N LI G   H KA    EAM+L   M      PD+ TY +++ GLC  G  + A 
Sbjct: 799  NTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             LL KM +  +   V+ YN++IDG CK   M+ AL++  +M  KG+ PNVVT+SSLI   
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 375  CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            C  G    A  L ++M+ + + PDV  F+ALID   K+G + E  +LY EM++  I PS+
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             T SSLI+G   + R+  A   F     K    +C P+ V Y  +I+  C   ++ +  +
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 495  LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            +F +M    L  +  TY  +++GL +A        +  +M+  G+ P+ +    ++ G  
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 555  ENGDLKSAFRCSEFLKESRI 574
            +NG L+ A    E+L+ S++
Sbjct: 1092 KNGKLEKAMVVFEYLQRSKM 1111



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 250/520 (48%), Gaps = 48/520 (9%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P      +L+NG  ++ +        ++MV  G   D+V Y  +ID  C    V  A + 
Sbjct: 256 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 315

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F E+  KGI P VV YT L++GLCN ++  +A  +   M +  + PN+ TY+AL+D + K
Sbjct: 316 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 375

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V  A E + EM+  ++ P++VT+  L++GLC    +  A   F  M   G   ++  
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G CKA  + + M L  EM +  +  +  TYN LI+G    G ++ A+    +M 
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI  ++ TYN L+ G C  G++EKAL +   M ++ ++ ++VT++++I G CK G ++
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS-- 439
            A  L+  + +K L PD+V +T ++ GL   G + E   LY +M +  +  +  T+S   
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 615

Query: 440 ------LIHGLF------------KNGRISNALNFFLEKTDKTDGGY---CSPNHVLYAA 478
                 LI  +             K+G    AL+     + KT   Y    S N +    
Sbjct: 616 ITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELK 675

Query: 479 IIQALCYDGQILKA---------SKLFS----------------DMRSDNLRPDNCTYTT 513
           +  A+   G+++K+         SKL S                 M++  +  ++ TY+ 
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++    R  ++   + +L  M+K+G  P+ V    ++ GY
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 775



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 220/420 (52%), Gaps = 4/420 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P++V +  L+  +    K     S+ + M   G+  +LYT+N +++
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C    V+ AL    +ML    +P+ VT G L++G C+   +  A +    M + G  P
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  YN +ID  CK   + +A     E+E+  I P+V TY  L+ GLC   +   A  LL
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K+ I  NV+TY++L+D + K G + +A  +  +M    ++P++VT+SSLI+G C  
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ID A  ++  MV K  + DVV +  LI+G  K   +++ ++L++EM +  +  +  T 
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G F+ G +  A  FF     + D    SP+   Y  ++  LC +G++ KA  +F 
Sbjct: 472 NTLIQGFFQAGDVDKAQEFF----SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM+   +  D  TYTT++RG+ +  ++ +   L   +   G+ PD V    M+ G    G
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 233/472 (49%), Gaps = 5/472 (1%)

Query: 92   NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            NGL  + K D     + EMV       ++ +  L+            ++L ++M + GI 
Sbjct: 669  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727

Query: 152  PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
                 Y+ILI+  C  +++  A ++   M + G  PN+ T ++L++GYC    ++ A+  
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 212  YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              +M     QPN VTF  L+ GL    +   A      M   G  P++  Y  +++G CK
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847

Query: 272  AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
             G+   A +L ++ME+ ++ P V  YN +I GLC    ++ A  L ++M  +GI  NVVT
Sbjct: 848  RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 332  YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            Y+SLI   C  G    A  + S M E+ + P+V TFS+LID   K G +  A  LY EMV
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967

Query: 392  IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
             +S+ P +V +++LI+G      + E  ++++ M+     P V T ++LI G  K  R+ 
Sbjct: 968  KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027

Query: 452  NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
              +  F E + +   G    N V Y  +IQ L   G    A ++F +M SD + P+  TY
Sbjct: 1028 EGMEVFREMSQRGLVG----NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 1083

Query: 512  TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             T+L GL +  ++   M++   + +  + P      +M+ G  + G ++  +
Sbjct: 1084 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 4/324 (1%)

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A + F  M K   FP+I  +N L+    K       +SL  +ME   I  D++T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           I+I   C   Q+  A  +L KM K G   + VT  SL++G+C+   +  A+S+  +M E 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +P++V ++++ID  CK   ++ A   + E+  K + P+VV +TAL++GL       + 
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL  +M++ KITP+V T S+L+    KNG++  A   F E    +      P+ V Y++
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS----IDPDIVTYSS 403

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC   +I +A+++F  M S     D  +Y T++ G  +AKR+ D M L  +M + G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           +V + V    +++G+ + GD+  A
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKA 487



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +N A++ + +M+     P++V F  L+  + K+ +     +    M   G+  +++ +N 
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+  C    +  A+S+  +M K    PD  T   L+ G C   ++  A  L+ KM + G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              ++V YN++ID  CK   +  A     ++  KG+ PNVVT+++L++G C +     A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L ++M+ K + P+V+ ++AL+D   K+G + E   L++EM+   I P + T SSLI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             + RI  A   F    D      C  + V Y  +I   C   ++    KLF +M    L
Sbjct: 409 CLHDRIDEANQMF----DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +  TY T+++G  +A  +       + M   GI PD     +++ G  +NG+L+ A 
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/501 (31%), Positives = 262/501 (52%), Gaps = 28/501 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + N ++NGL K+G+ D  +  + EM+  G   ++VTY  +ID  C    + KA  +
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 142 FDEMIDK----------------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
             +M DK                G++P VV Y++LI   C   +  EA ++F SM   G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV----TFGVLMDGLCKVGELR 241
            P+ YTY  L+ GY        AL   H++L   +Q  +      F +L+    K   L 
Sbjct: 257 NPDAYTYRTLLHGYA----TKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F+ M + G  PN+  Y  +ID  CKAG + +A+S  S+M    +SPD+ T+  LI
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC +G+ +  E L  +M   GI  N +  N+++D  CKEG + +A     Q+   GV+
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VV+++ LIDG C  G +D ++ L   MV   L PD V ++AL++G  K+G + + L L
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           Y+EM    + P+  T + ++HGLF  GR+  A  F+++  D   G     N   Y  ++ 
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS--GIQLGIN--TYNIVLG 548

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC +  + +A ++F  +RS   + +  T+  M+ GLL+  R+ D   L + ++  G+VP
Sbjct: 549 GLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVP 608

Query: 542 DAVINQVMVRGYQENGDLKSA 562
           DA+I  +M++ + E G L+ +
Sbjct: 609 DAIIYGLMIQSHIEEGLLEES 629



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 230/464 (49%), Gaps = 45/464 (9%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           L  D  T+G+LI C C  G           ++D  +E         +H + ++       
Sbjct: 90  LATDACTFGILIRCFCNVG-----------LLDFALEEESRGSRAAVHMMADDGY----- 133

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
                   C   PN+ +YN +++G  K  +V++A   +HEML     PN+VT+  ++DGL
Sbjct: 134 -------NCP--PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGL 184

Query: 235 CKV----------------GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           CK                 G+L  A      M+  G+ P++  Y+ LID +CK G   EA
Sbjct: 185 CKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEA 244

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            ++   M +   +PD +TY  L+ G    G L     LL  M ++GI      +N LI  
Sbjct: 245 RNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRA 304

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           Y K   ++KA++   +M +KG  PNVVT++++ID  CKAG ++ A+  +++MV + L PD
Sbjct: 305 YAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPD 364

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           ++ FT+LI GL   G  K+  +L  EM+   I P+   +++++  L K GR+  A +FF 
Sbjct: 365 IITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF- 423

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D+       P+ V Y  +I   C DG++ ++ KL   M S  LRPDN TY+ +L G 
Sbjct: 424 ---DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGY 480

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  R+ D + L  +M    + P+A+   +++ G    G + +A
Sbjct: 481 CKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAA 524



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 230/472 (48%), Gaps = 39/472 (8%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           A+    A+L  +  KG+ +      ++M   GL  DVVTY +LID  C  G   +A N+F
Sbjct: 189 AMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIF 248

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVE------------------------------ 172
           D M+ +G  P    Y  L+HG   +  +V+                              
Sbjct: 249 DSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKN 308

Query: 173 -----AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
                A + F  MR+ G  PN+ TY  ++D  CK   V  A+  + +M+   L P+++TF
Sbjct: 309 ETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITF 368

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC +GE +        M   G+ PN    N ++D  CK G + EA     ++  
Sbjct: 369 TSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIH 428

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PDV +Y ILI G C  G+++ +  LL +M   G+  + VTY++L++GYCK G ++ 
Sbjct: 429 VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDD 488

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL++  +M  K V+PN +T++ ++ G   AG + AA   Y ++V   +   +  +  ++ 
Sbjct: 489 ALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLG 548

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL ++  + E LR+++ +   +    V T + +I GL K GRI +A + F   +     G
Sbjct: 549 GLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF---SAILPSG 605

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              P+ ++Y  +IQ+   +G + ++ +LF  M  +    ++ T   ++R LL
Sbjct: 606 LV-PDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLL 656



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 231/462 (50%), Gaps = 10/462 (2%)

Query: 35  CYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEE-----ALWVYRKIEVLPAIQAC 87
           C    N  +S+     NP  ++  TL+  ++  G + +     AL +   I +   +   
Sbjct: 241 CTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV--F 298

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+    K    D     + EM   G   +VVTY  +ID  C  G V  A++ F +M+ 
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+ P ++ +T LIHGLC   +  + E +   M   G+ PN    N +MD  CK   V  
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +F+ +++H  ++P+VV++ +L+DG C  G++  +      M   G+ P+   Y+ L++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK G + +A++L  EM   ++ P+  TYNI++ GL   G++  A     K+   GI  
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            + TYN ++ G C+   +++AL +   +  K  +  V TF+ +I G  K G I  A  L+
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF 598

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           + ++   LVPD +++  +I    ++G ++E+  L+  M +   T +  T+++++  L + 
Sbjct: 599 SAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEK 658

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           G +  A   +L K D+ +    +   VL  +I+    Y  ++
Sbjct: 659 GDVRRA-GTYLTKIDEKEYSVEASTAVLLISIVSERKYQKEV 699



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 204/388 (52%), Gaps = 8/388 (2%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F+P+V  ++T+I    + G +E+A+  + ++    + P I    +L++GL   G++  V 
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +   EM+  G+  + +    ++D  C +G V++A + FD++I  G++P VV YTILI G 
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + KM E+  +   M   G+ P+  TY+AL++GYCK   V+ AL  Y EM   +++PN 
Sbjct: 446 CLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNA 505

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+ +++ GL   G + AA  F++ +   G+   I  YN ++ G C+   + EA+ +   
Sbjct: 506 ITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQG 565

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +   E   +V T+NI+I GL  VG++  A+ L   +   G++ + + Y  +I  + +EG 
Sbjct: 566 LRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGL 625

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E++  +   M + G   N  T ++++    + G++  A    T++  K    +      
Sbjct: 626 LEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVL 685

Query: 405 LIDGLSKDGNMKETLRL---YKEMLEAK 429
           LI  +S+    KE   L   Y+  +E +
Sbjct: 686 LISIVSERKYQKEVKFLPEKYQSFMEPR 713



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 214/498 (42%), Gaps = 112/498 (22%)

Query: 138 ALNLFDEMIDKGIEPTV----VIYTILIHGLCNENK---MVEAESMFRSMRECGVVPNLY 190
           ALNLFDE++ +    +V     + T++ HG  + ++      A S+F +M + GV     
Sbjct: 33  ALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGV----- 87

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL---------- 240
                                      + L  +  TFG+L+   C VG L          
Sbjct: 88  ---------------------------NKLATDACTFGILIRCFCNVGLLDFALEEESRG 120

Query: 241 -RAAGNFFVHMAK---FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            RAA    VHM     +   PN+  YN +I+G  K G + +A +L  EM      P++ T
Sbjct: 121 SRAA----VHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVT 176

Query: 297 YNILIKGLCGV----------------GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           YN +I GLC                  GQLE A  LL+KM   G+  +VVTY+ LID YC
Sbjct: 177 YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG---------------------- 378
           K G   +A ++   M  +G  P+  T+ +L+ G    G                      
Sbjct: 237 KIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH 296

Query: 379 -------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
                         +D AM  + EM  K   P+VV +T +ID L K G +++ +  + +M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   ++P + T +SLIHGL   G          E  ++       PN +    I+ +LC 
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG----IHPNAIFLNTIMDSLCK 412

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G++L+A   F  +    ++PD  +YT ++ G     +M + + LL  M+ +G+ PD V 
Sbjct: 413 EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVT 472

Query: 546 NQVMVRGYQENGDLKSAF 563
              ++ GY +NG +  A 
Sbjct: 473 YSALLNGYCKNGRVDDAL 490


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 257/496 (51%), Gaps = 7/496 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI  + ++  +  AL V  ++    V   +   N+L+ G    G  D+  E  E M 
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  +VVTY  LI   C    + +A +L++ M+  G+ P VV  + L+ GLC + +  
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA ++FR M + GV PN  TY  L+D   K    + +L    EM+   +  ++V +  LM
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D L K G++  A +   H     + PN   Y  L+D HC+AGN+  A  +  +ME+  + 
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V T++ +I GL   G L  A   ++KM   GI  NVVTY +LIDG+ K    E AL V
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  +GVE N     SL++G  K GNI+ A  L+ +M  + L+ D V +T L+DGL K
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            GNM    ++ +E++E  ++P     +  I+ L   G+ S A +F  E  +        P
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG----LEP 605

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +   Y  +I A C +G+  KA KL  +M+ ++++P+  TYTT++ GLL A  +     LL
Sbjct: 606 DQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLL 665

Query: 532 ADMIKMGIVPDAVINQ 547
            +M   G  P ++ +Q
Sbjct: 666 NEMASAGFAPTSLTHQ 681



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 166/536 (30%), Positives = 262/536 (48%), Gaps = 6/536 (1%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E   + E L   R I+ L  +   NAL++G  K     +     E M   G+  DVV Y 
Sbjct: 168 EAAALAEMLVRGRGIDGLDVV-GWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYN 226

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            L+      GD   AL + + M   G+EP VV YT LI   C    M EA S++  M   
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS 286

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           GV+P++ T +AL+DG C+    + A   + EM    + PN VT+  L+D L K      +
Sbjct: 287 GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M   GV  ++ +Y  L+D   K G + EA  +    +   I+P+  TY +L+  
Sbjct: 347 LGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G ++GAE +L +M ++ ++ NVVT++S+I+G  K G + KA     +M + G+ PN
Sbjct: 407 HCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPN 466

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+ +LIDG  K    +AA+ +Y +M+ + +  +  V  +L++GL K+GN++    L+K
Sbjct: 467 VVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFK 526

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M E  +       ++L+ GLFK G +  A     E  +K      SP+ V+Y   I  L
Sbjct: 527 DMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN----LSPDAVVYNVFINCL 582

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+  +A     +MR+  L PD  TY TM+    R  +    + LL +M +  I P+ 
Sbjct: 583 CTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642

Query: 544 VINQVMVRGYQENGDLKSA-FRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKE 598
           +    +V G  E G +K A F  +E        +S T     ++  G  +P V  E
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 260/549 (47%), Gaps = 42/549 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+ A    G+I+ A  V  ++E   V+P +   ++++NGL+K+G      ++  +M
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  +VVTYG LID          AL+++ +M+ +G+E    +   L++GL     +
Sbjct: 459 KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNI 518

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE++F+ M E G++ +   Y  LMDG  K  ++  A +   E++  NL P+ V + V 
Sbjct: 519 EGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVF 578

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC +G+   A +F   M   G+ P+   YN +I   C+ G   +A+ L  EM++  I
Sbjct: 579 INCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-------------------------- 324
            P++ TY  L+ GL   G ++ A+ LL +M   G                          
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 325 ---------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
                    + A++  YN+L+   C  G    A  V  +M  +G+ P+ +TF++LI G C
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+ ++D A  +Y +M+ + L P++  F  L+ GL   G + E   +  +M +  + P+  
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T   L+ G  K      AL  + E   K   G+  P    Y +++      G + +A +L
Sbjct: 819 TYDILVTGYAKKSNKVEALRLYCEMVSK---GFI-PKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           FS+M+   +   + TY  +L G  + +  ++V +LL DM ++G  P       M R +  
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSR 934

Query: 556 NGDLKSAFR 564
            G    A R
Sbjct: 935 PGMTGEARR 943



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 256/520 (49%), Gaps = 15/520 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  + +   ++EA  +Y    +  VLP +   +AL++GL + G+F   +  +
Sbjct: 256 NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALF 315

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+  + VTY  LID         ++L L  EM+ +G+   +V+YT L+  L  E
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKE 375

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA+ + R  +   + PN  TY  L+D +C+  +++ A +   +M   ++ PNVVTF
Sbjct: 376 GKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTF 435

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GL K G L  A ++   M   G+ PN+  Y  LIDG  K      A+ +  +M  
Sbjct: 436 SSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLH 495

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G +EGAE L + M + G+L + V Y +L+DG  K G+M  
Sbjct: 496 EGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPA 555

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  V  ++ EK + P+ V ++  I+  C  G    A     EM    L PD   +  +I 
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              ++G   + L+L KEM    I P++ T ++L+ GL + G +  A  F L   +    G
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA-KFLL--NEMASAG 672

Query: 468 YCSPNHVLYAAIIQALCYDGQ----ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           + +P  + +  ++QA C   +    IL+  +L   M    L  D   Y T++  L     
Sbjct: 673 F-APTSLTHQRVLQA-CSGSRRPDVILEIHEL---MMGAGLHADITVYNTLVHVLCCHGM 727

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +  ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 728 ARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 169/411 (41%), Gaps = 38/411 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+    + G++  A  V +++    + P     N  +N L   GKF     F +EM 
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  TY  +I   C +G   KAL L  EM    I+P ++ YT L+ GL     + 
Sbjct: 600 NTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVK 659

Query: 172 EAESMFRSMRECGVVPNLYT-----------------------------------YNALM 196
           +A+ +   M   G  P   T                                   YN L+
Sbjct: 660 KAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLV 719

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
              C       A     EML   + P+ +TF  L+ G CK   L  A   +  M   G+ 
Sbjct: 720 HVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLS 779

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI  +N L+ G   AG + EA ++ S+M+K  + P+  TY+IL+ G         A  L
Sbjct: 780 PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRL 839

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M  +G +    TYNSL+  + K G M +A  + S+M  +GV     T+  L++G  K
Sbjct: 840 YCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 899

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             N      L  +M      P     +++    S+ G   E  RL K + +
Sbjct: 900 LRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 167/393 (42%), Gaps = 80/393 (20%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE----ISPDVFTYNILIKGLCGVGQLEGA 313
           +    N +I  +C   +L  A+SL       +    ++ D  +YNI +  L   G    A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 314 EGLLQKMYKEGI-------------------------LA------------NVVTYNSLI 336
             +L +M K G+                         LA            +VV +N+LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 337 DGYCKEGDMEKALSVCSQMTEK-----------------------------------GVE 361
           DGYCK  DM  AL+V  +MT +                                   GVE
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVVT+++LI   CK   +D A  LY  MV   ++PDVV  +AL+DGL +DG   E   L
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           ++EM +  + P+  T  +LI  L K  R S +L    E   +        + V+Y A++ 
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG----VVMDLVMYTALMD 370

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L  +G+I +A  +    +SDN+ P+  TYT ++    RA  +     +L  M +  ++P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + V    ++ G  + G L  A      +K+S I
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGI 463


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 288/569 (50%), Gaps = 24/569 (4%)

Query: 16  CLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY 75
           C ++D    LL  RK     +  ++              F++++    + G +EEAL + 
Sbjct: 223 CKLRDANRALLVLRKMQDAGFVPWDF------------TFNSVVDVLVKGGRMEEALHI- 269

Query: 76  RKIEVLP-----AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
            K E+L      ++     L++G   + +     + +EE +  GLV   VTY VLI  C 
Sbjct: 270 -KDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCT 328

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
            +G   KA  L  +M D G+ P+   + ++I GL N+    +A S+F+ M + G+ P+ +
Sbjct: 329 EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAF 387

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+   C+   +  AL  + +M    ++P +VT+  L+   C  G +  A   +  M
Sbjct: 388 TYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM 447

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G  PN+  Y  L+ GH       +A +L +EM++  +S + +TYN LI GLC VG++
Sbjct: 448 PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRV 507

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                +L++   EG +   +TYNS+I+G+ K G M  A +V  QM  KG+ PN+VT++S 
Sbjct: 508 CEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSF 567

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           IDG CK    D A+ +  ++  K L PD+  + +LI G  ++GNM   L++   ML+  +
Sbjct: 568 IDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGL 627

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P++   +S I G +KN ++      F EK  K        +   Y  +I     DG + 
Sbjct: 628 LPNISVYNSFITG-YKNLKMMEEALRFYEKMIKEG---IDLDTATYTTLIDGFSKDGNVT 683

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A KL+S+M +    PD+ T+T +  GL R   + D   LL +M ++ I P+ ++  +++
Sbjct: 684 FALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLI 743

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSET 579
            GY  NG L+ AFR  + + E +I   +T
Sbjct: 744 NGYLRNGKLQEAFRLHDEMLERKIMPDDT 772



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 203/408 (49%), Gaps = 5/408 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           S+F  +    IP  +   ++ LI    +   I EAL ++ K+    V P I   ++LL  
Sbjct: 373 SLFKEMADSGIP--DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
               G  D   + Y EM   G   +VVTY  L+     +    KA  L  EM   G+   
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
              Y  LI+GLC   ++ E   M +     G VP   TYN++++G+ K   +  A   Y 
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M    + PN+VT+   +DG CK      A      +   G+ P+I  YN LI G C+ G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           N+  A+ +   M K  + P++  YN  I G   +  +E A    +KM KEGI  +  TY 
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYT 670

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LIDG+ K+G++  AL + S+M  KG  P+ +TF++L  G C+ G+ID A  L  EM   
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            + P+V+++  LI+G  ++G ++E  RL+ EMLE KI P   T   L+
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 220/494 (44%), Gaps = 40/494 (8%)

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G   D   + V++  C  +G    A+ LFDEM    IEP   + ++ I  LC   
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNA---------------------------------- 194
               A  + R M++ G VP  +T+N+                                  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 195 -LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            LM GYC   +V +AL+ + E L   L P  VT+ VL+ G  + G    A      M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P+   +N +I G        +A+SL  EM    I PD FTYNILI  LC   ++  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L +KM + G+   +VTY+SL+  YC  G M++A+ + ++M  KG  PNVVT+++L+ G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
                  D A  L  EM    +  +   +  LI+GL   G + E   + K        P+
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T +S+I+G  K G + +A   + +   K       PN V Y + I   C       A 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKG----IPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K+ +D+R   LRPD   Y +++ G  +   M   + +L  M+K G++P+  +    + GY
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 554 QENGDLKSAFRCSE 567
           +    ++ A R  E
Sbjct: 642 KNLKMMEEALRFYE 655



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 202/419 (48%), Gaps = 19/419 (4%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKP-----HHVCY--SVFNALNSLEIPKFNPS---- 53
           L N KL+K+A  L K++ ++ +          H +C    +  ALN  E  K N +    
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWE--KMNETGVKP 419

Query: 54  ---VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
               + +L++ +   G ++EA+ +Y ++      P +     L+ G I K  FD  +   
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+  +  TY  LI+  C  G V +   +      +G  PT + Y  +I+G    
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A ++++ M   G+ PN+ TY + +DGYCK +  + AL+  +++    L+P++  +
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAY 599

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C+ G +  A    V M K G+ PNI VYN  I G+     + EA+    +M K
Sbjct: 600 NSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK 659

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D  TY  LI G    G +  A  L  +M  +G + + +T+ +L  G C+ GD++ 
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           A  +  +M    + PNV+ ++ LI+G  + G +  A  L+ EM+ + ++PD   +  L+
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 188/417 (45%), Gaps = 11/417 (2%)

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           SM   GV P+  +   L+    + A    AL    EM       +   F V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
               A   F  M    + P+  V +  I   CK  +   A+ +  +M+     P  FT+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            ++  L   G++E A  +  ++   G   +VV   +L+ GYC + ++ KAL +  +    
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P  VT++ LI G  + G  + A  L  +M    L+P    F  +I GL  D   K+ 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L+KEM ++ I P  FT + LIH L +  +I  ALN + EK ++T      P  V Y +
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW-EKMNETG---VKPYIVTYHS 426

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++   C +G + +A KL+++M      P+  TYTT+++G +          LLA+M + G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 539 I-----VPDAVINQVMVRGYQ-ENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
           +       + +IN + V G   E G++   F    F+  +   +S   G      +G
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 254/496 (51%), Gaps = 24/496 (4%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFY-EEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           V P +   N L+  L  +G+ +       ++M   G   +VVTY  L+   C  G+V  A
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA 209

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             L   M + G+ P++V +  +++GLC   +M +A  MF  M   G+ P+  +YN L+ G
Sbjct: 210 ERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCK   ++ AL  + EM    + P+VVTF  L+  +C+ G L  A      M + G+  N
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            F +  LIDG C+ G L +A+    EM +  I P V  YN+LI G C +G+++ A  L+ 
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M  +G+  +VVTY++++ GYCK GD + A  +  +M +KGV P+ +T+SSLI G C+  
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L+ +M+   L PD   +T LIDG  K+GN+++ L L+ EM++  + P V T S
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509

Query: 439 SLIHGLFKNGRISNA--LNFFLEKTDKTDGGYCSPNHVLY---------------AAIIQ 481
            LI GL K+ R   A  L F L   D        P+++ Y                A+++
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPV------PDNIKYEALMHCCRTAEFKSVVALLK 563

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                G + +A K++  M   + + D   Y+ ++ G  R   ++  +     +++ G  P
Sbjct: 564 GFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSP 623

Query: 542 DAVINQVMVRGYQENG 557
           ++     +VRG  E G
Sbjct: 624 NSTSTISLVRGLFEEG 639



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/469 (33%), Positives = 255/469 (54%), Gaps = 26/469 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+ AF   G ++ A   + V R+  V P++   N ++NGL K G+ +   + +
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF 248

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  D V+Y  L+   C  G + +AL +F EM  KG+ P VV +T LIH +C  
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRA 308

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A ++   MRE G+  N +T+ AL+DG+C+   ++ AL    EM    +QP+VV +
Sbjct: 309 GNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++G CK+G +  A      M   G+ P++  Y+ ++ G+CK G+   A  L  +M K
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK 428

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  TY+ LI+GLC   +L  A  L +KM + G+  +  TY +LIDG+CKEG+++K
Sbjct: 429 KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF----- 402
           ALS+  +M +KGV P+VVT+S LIDG  K+     A  L  ++  +  VPD + +     
Sbjct: 489 ALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548

Query: 403 ----------TALIDGLSKDGNMKETLRLYKEMLEA--KITPSVFTVSSLIHGLFKNGRI 450
                      AL+ G S  G M +  ++Y+ ML+   K+  SV++V  LIHG  + G I
Sbjct: 549 CCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSV--LIHGHCRGGNI 606

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
             AL+F          G+ SPN     ++++ L  +G  ++A  +  ++
Sbjct: 607 MKALSF---HKQLLRCGF-SPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 29/522 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWV----YRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   ++ L+ A    G  EEAL V     R     P +   N L+    + G+ D+    
Sbjct: 153 NVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL 212

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   G+   +VT+  +++  C  G +  A  +FDEM  +G+ P  V Y  L+ G C 
Sbjct: 213 VGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCK 272

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + EA ++F  M + GVVP++ T+ +L+   C+  ++ RA+    +M    L+ N  T
Sbjct: 273 AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT 332

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DG C+ G L  A      M +  + P++  YN LI+G+CK G + EA  L  EME
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PDV TY+ ++ G C +G  + A  L +KM K+G++ + +TY+SLI G C+E  + 
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M + G++P+  T+++LIDG CK GN+  A+ L+ EM+ K ++PDVV ++ LI
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512

Query: 407 DGLSKDGNMKETLRL---------------YKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           DGLSK    KE  RL               Y+ ++    T    +V +L+ G    G ++
Sbjct: 513 DGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMN 572

Query: 452 NALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            A   +   L++  K DG        +Y+ +I   C  G I+KA      +      P++
Sbjct: 573 QADKVYQSMLDRHWKLDGS-------VYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNS 625

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +  +++RGL      ++   ++ +++    + DA  ++ ++
Sbjct: 626 TSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/408 (34%), Positives = 217/408 (53%), Gaps = 5/408 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALM 196
           A  L   M+  G+ P V  Y IL+  LC   +  EA  +    MR  G  PN+ TYN L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
             +C+  +V+ A      M    ++P++VTF  +++GLCK G +  A   F  MA+ G+ 
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN L+ G+CKAG L EA+++ +EM +  + PDV T+  LI  +C  G LE A  L
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + +M + G+  N  T+ +LIDG+C+ G ++ AL    +M E  ++P+VV ++ LI+G CK
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A  L  EM  K + PDVV ++ ++ G  K G+      L ++ML+  + P   T
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SSLI GL +  R+ +A   F EK  +       P+   Y  +I   C +G + KA  L 
Sbjct: 438 YSSLIRGLCEERRLGDACELF-EKMLQLG---LQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +M    + PD  TY+ ++ GL ++ R  +   LL  +     VPD +
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNI 541



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 222/417 (53%), Gaps = 6/417 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P+++ Y  ++  L ++  +  A  +  SM   GV PN+YTYN L+   C       A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 209 LEFY-HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           L     +M      PNVVT+  L+   C+ GE+ AA      M + GV P++  +N +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG + +A  +  EM +  ++PD  +YN L+ G C  G L  A  +  +M ++G++ 
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVT+ SLI   C+ G++E+A+++  QM E+G+  N  TF++LIDG C+ G +D A+   
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    + P VV +  LI+G  K G M E   L  EM    + P V T S+++ G  K 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G   +A  F L +     G    P+ + Y+++I+ LC + ++  A +LF  M    L+PD
Sbjct: 414 GDTDSA--FELNRKMLKKG--VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPD 469

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             TYTT++ G  +   +   + L  +MIK G++PD V   V++ G  ++   K A R
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 194/412 (47%), Gaps = 53/412 (12%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  + + G + EAL V+ ++    V+P +    +L++ + + G  +       +M 
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  +  T+  LID  C  G +  AL    EM +  I+P+VV Y +LI+G C   +M 
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M   G+ P++ TY+ ++ GYCK+ D + A E   +ML   + P+ +T+  L+
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+   L  A   F  M + G+ P+ F Y  LIDGHCK GN+ +A+SL  EM K  + 
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------------- 335
           PDV TY++LI GL    + + A+ LL K+Y E  + + + Y +L                
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562

Query: 336 ----------------------------------IDGYCKEGDMEKALSVCSQMTEKGVE 361
                                             I G+C+ G++ KALS   Q+   G  
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS 622

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           PN  +  SL+ G  + G    A  +  E++    + D     ALID   K+G
Sbjct: 623 PNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 178/393 (45%), Gaps = 61/393 (15%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   F+ LI  F   G +++AL      R+  + P++   N L+NG  K G+ D   E
Sbjct: 327 RMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM   G+  DVVTY  ++   C  GD   A  L  +M+ KG+ P  + Y+ LI GLC
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E ++ +A  +F  M + G+ P+ +TY  L+DG+CK  +V +AL  + EM+   + P+VV
Sbjct: 447 EERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVV 506

Query: 226 TFGVLMDGLCKVGELRAAGNFF------------------VHMAKFGVFPNIF------- 260
           T+ VL+DGL K    + A                      +H  +   F ++        
Sbjct: 507 TYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFS 566

Query: 261 -------------------------VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
                                    VY+ LI GHC+ GN+ +A+S   ++ +   SP+  
Sbjct: 567 MKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNST 626

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE--GDMEKALSVCS 353
           +   L++GL   G    A+ ++Q++     LA+  T  +LID   KE  G  +    +C 
Sbjct: 627 STISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGVGYFQAQGELCM 686

Query: 354 QMTEKGVEP-----NVVTFSSLIDGQCKAGNID 381
           Q     VE      ++V F + I G C A + D
Sbjct: 687 QKPALFVEHWNCMMSIVLFGAFI-GSCLAEHYD 718


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 234/430 (54%), Gaps = 7/430 (1%)

Query: 141 LFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           LFDE+    D+    + +++ +L+   C   +  EA   F  M+E G+VP + T N ++ 
Sbjct: 141 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 200

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            + K+  +  A   Y EM    +   V TF ++++ LCK G+L+ A  F   M   G  P
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 260

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  YN +I G+   GN+  A  +   M    I PD +TY  LI G+C  G+LE A GL 
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM + G++ N VTYN+LIDGYC +GD+E+A S   +M +KG+ P+V T++ L+      
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 380

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +  EM  K ++PD + +  LI+G S+ GN K+   L+ EML   I P+  T 
Sbjct: 381 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 440

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI+ L +  R+  A + F +  D+      SP+ +++ A++   C +G + +A  L  
Sbjct: 441 TSLIYVLSRRNRMKEADDLFEKILDQG----VSPDVIMFNAMVDGHCANGNVERAFMLLK 496

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M   ++ PD  T+ T+++G  R  ++ +  MLL +M + GI PD +    ++ GY   G
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556

Query: 558 DLKSAFRCSE 567
           D+K AFR  +
Sbjct: 557 DIKDAFRVRD 566



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 214/365 (58%), Gaps = 5/365 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F P+V  ++T+I  +S  G+IE A  +   + V    P      +L++G+ K+G+ +   
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +++MV  GLV + VTY  LID  C +GD+ +A +  DEM+ KGI P+V  Y +L+H L
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             E +M EA+ M + MR+ G++P+  TYN L++GY +  +  +A + ++EML   ++P  
Sbjct: 378 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 437

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+  L +   ++ A + F  +   GV P++ ++N ++DGHC  GN+  A  L  E
Sbjct: 438 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 497

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++  + PD  T+N L++G C  G++E A  LL +M + GI  + ++YN+LI GY + GD
Sbjct: 498 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 557

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  V  +M   G  P ++T+++LI   CK    D A  L  EMV K + PD   + +
Sbjct: 558 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 617

Query: 405 LIDGL 409
           LI+G+
Sbjct: 618 LIEGM 622



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 242/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  L+    E+   +EA    ++ ++  ++P I+ CN +L+  +K  + +  W  Y EM
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + V T+ ++++  C +G + KA      M   G +P VV Y  +IHG  +   +
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +  +MR  G+ P+ YTY +L+ G CK   +  A   + +M+   L PN VT+  L
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G+L  A ++   M K G+ P++  YN L+      G + EA  +  EM K  I
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYNILI G    G  + A  L  +M  +GI    VTY SLI    +   M++A  
Sbjct: 399 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 458

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++ ++GV P+V+ F++++DG C  GN++ A  L  EM  KS+ PD V F  L+ G  
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 518

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E   L  EM    I P   + ++LI G  + G I +A   F  + +    G+ +
Sbjct: 519 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA---FRVRDEMLSIGF-N 574

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+I+ LC + +   A +L  +M +  + PD+ TY +++ G+
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 232/472 (49%), Gaps = 14/472 (2%)

Query: 105 EFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           E ++E+ L      V   + + +L+  CC      +A   F  M +KGI P +     ++
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
                 N+M  A  ++  M    +   +YT+N +++  CK   + +A EF   M     +
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVV++  ++ G    G +  A      M   G+ P+ + Y  LI G CK G L EA  L
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M +  + P+  TYN LI G C  G LE A     +M K+GI+ +V TYN L+     
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG M +A  +  +M +KG+ P+ +T++ LI+G  + GN   A  L+ EM+ K + P  V 
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T+LI  LS+   MKE   L++++L+  ++P V   ++++ G   NG +  A     E  
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K+      P+ V +  ++Q  C +G++ +A  L  +M+   ++PD+ +Y T++ G  R 
Sbjct: 500 RKS----VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN--GDLKSAFRCSEFLKE 571
             + D   +  +M+ +G  P  +    +++   +N  GDL       E LKE
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL-----AEELLKE 602


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/538 (29%), Positives = 266/538 (49%), Gaps = 31/538 (5%)

Query: 35  CYSVFNALNSL-EIPK----FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQA 86
           CY    A+    E P+    +N + ++ +I    ++G I+EA  +   +E+    P + +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            + ++NG  + G+ D VW+  E M   GL  +   YG +I   C    + +A   F EMI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            +GI P  V+YT LI G C    +  A   F  M    + P++ TY A++ G+C++ D+ 
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A + +HEM    L+P+ VTF  L++G CK G ++ A     HM + G  PN+  Y  LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG CK G+L  A  L  EM K  + P++FTYN ++ GLC  G +E A  L+ +    G+ 
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           A+ VTY +L+D YCK G+M+KA  +  +M  KG++P +VTF+ L++G C  G ++    L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              M+ K + P+   F +L+       N+K    +YK+M    + P   T  +L+ G  K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
              +  A   F E   K   G+ S +   Y+ +I+      + L+A ++F  MR + L  
Sbjct: 644 ARNMKEAWFLFQEMKGK---GF-SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV--MVRGYQENGDLKSA 562
           D                  ++    +D    G  PD +++ +  ++  Y  +  L+ A
Sbjct: 700 DK-----------------EIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 740



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 260/510 (50%), Gaps = 14/510 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEF 106
           +P VF        + G + EA  V+ K+    ++ ++ +CN  L  L K   K  +    
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + E    G+  +V +Y ++I   C  G + +A +L   M  KG  P V+ Y+ +++G C 
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ +   +   M+  G+ PN Y Y +++   C++  +  A E + EM+   + P+ V 
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG CK G++RAA  FF  M    + P++  Y  +I G C+ G++ EA  L  EM 
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD  T+  LI G C  G ++ A  +   M + G   NVVTY +LIDG CKEGD++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M + G++PN+ T++S+++G CK+GNI+ A+ L  E     L  D V +T L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDK 463
           D   K G M +   + KEML   + P++ T + L++G   +G + +    LN+ L K   
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-- 591

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +PN   + ++++  C    +  A+ ++ DM S  + PD  TY  +++G  +A+ 
Sbjct: 592 -----IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           M +   L  +M   G         V+++G+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 241/476 (50%), Gaps = 18/476 (3%)

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI-----DCCCGQGDVMKALNLFDEMID 147
           GL+++ +       +E+M+  GLV  V +  V +     DC         A+ +F E  +
Sbjct: 189 GLLREAR-----RVFEKMLNYGLVLSVDSCNVYLTRLSKDCY----KTATAIIVFREFPE 239

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+   V  Y I+IH +C   ++ EA  +   M   G  P++ +Y+ +++GYC+  ++++
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
             +    M    L+PN   +G ++  LC++ +L  A   F  M + G+ P+  VY  LID
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G++  A     EM   +I+PDV TY  +I G C +G +  A  L  +M+ +G+  
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + VT+  LI+GYCK G M+ A  V + M + G  PNVVT+++LIDG CK G++D+A  L 
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    L P++  + ++++GL K GN++E ++L  E   A +     T ++L+    K+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +  A     E      G    P  V +  ++   C  G +    KL + M +  + P+
Sbjct: 540 GEMDKAQEILKEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             T+ ++++       +     +  DM   G+ PD    + +V+G+ +  ++K A+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 242/485 (49%), Gaps = 10/485 (2%)

Query: 84  IQACNALLNGLIKKGKF---DSVWEFYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKA 138
           ++   +L++   ++ K    DS  +F++ +V       +D   + V        G + +A
Sbjct: 135 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNE-NKMVEAESMFRSMRECGVVPNLYTYNALMD 197
             +F++M++ G+  +V    + +  L  +  K   A  +FR   E GV  N+ +YN ++ 
Sbjct: 195 RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C++  +  A      M      P+V+++  +++G C+ GEL         M + G+ P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N ++Y  +I   C+   L EA    SEM +  I PD   Y  LI G C  G +  A    
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M+   I  +V+TY ++I G+C+ GDM +A  +  +M  KG+EP+ VTF+ LI+G CKA
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G++  A  ++  M+     P+VV +T LIDGL K+G++     L  EM +  + P++FT 
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S+++GL K+G I  A+    E     +    + + V Y  ++ A C  G++ KA ++  
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGE----FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    L+P   T+  ++ G      + D   LL  M+  GI P+A     +V+ Y    
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610

Query: 558 DLKSA 562
           +LK+A
Sbjct: 611 NLKAA 615



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 8/368 (2%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +  A   + +ML++ L  +V +  V +  L K   +   A   F    + GV  N+  YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I   C+ G + EA  L   ME    +PDV +Y+ ++ G C  G+L+    L++ M ++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  N   Y S+I   C+   + +A    S+M  +G+ P+ V +++LIDG CK G+I AA
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
              + EM  + + PDV+ +TA+I G  + G+M E  +L+ EM    + P   T + LI+G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K G + +A   F         G CSPN V Y  +I  LC +G +  A++L  +M    
Sbjct: 431 YCKAGHMKDA---FRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+P+  TY +++ GL ++  + + + L+ +    G+  D V    ++  Y ++G++  A 
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA- 545

Query: 564 RCSEFLKE 571
              E LKE
Sbjct: 546 --QEILKE 551



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 26/410 (6%)

Query: 158 TILIHGLCNENKMVEAESMFRSMR--ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           T  +H + N  K+  AE + RS++  EC    +   +  LM   C   D    L+F+ + 
Sbjct: 56  TEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIW-VLMKIKC---DYRLVLDFF-DW 110

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                  N+ +  +++       +L+ A +    ++ F   P + V +  +         
Sbjct: 111 ARSRRDSNLESLCIVIHLAVASKDLKVAQSL---ISSFWERPKLNVTDSFV-------QF 160

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           F+   L    + +   P VF  ++  + L   G L  A  + +KM   G++ +V + N  
Sbjct: 161 FDL--LVYTYKDWGSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVY 216

Query: 336 IDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +    K+      A+ V  +  E GV  NV +++ +I   C+ G I  A  L   M +K 
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             PDV+ ++ +++G  + G + +  +L + M    + P+ +   S+I  L +  +++ A 
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E   +       P+ V+Y  +I   C  G I  ASK F +M S ++ PD  TYT +
Sbjct: 337 EAFSEMIRQG----ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M++   L  +M   G+ PD+V    ++ GY + G +K AFR
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 242/467 (51%), Gaps = 12/467 (2%)

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +++  G   + +T+  LI+  C +G V +AL L D M++ G +P ++    L++GLC   
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K  EA  +   M E G  PN  TY  +++  CK      A+E   +M   N++ + V + 
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++DGLCK G L  A N F  M   G+  NI  YN LI G C AG   +   L  +M K 
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +I+P+V T+++LI      G+L  AE L ++M   GI  + +TY SLIDG+CKE  ++KA
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M  KG +PN+ TF+ LI+G CKA  ID  + L+ +M ++ +V D V +  LI G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT---- 464
             + G +     L++EM+  K+ P++ T   L+ GL  NG    AL  F EK +K+    
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSKMEL 604

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           D G       +Y  II  +C   ++  A  LF  +    ++P   TY  M+ GL +   +
Sbjct: 605 DIG-------IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +  +L   M + G  PD     +++R +  +GD   + +  E LK 
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 704



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 246/482 (51%), Gaps = 4/482 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP +   + L + + K  ++D V    ++M L G+  ++ T  ++I+C C    +  A +
Sbjct: 183 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 242

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              ++I  G EP  + ++ LI+GLC E ++ EA  +   M E G  P+L T N L++G C
Sbjct: 243 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 302

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                  A+    +M+ +  QPN VT+G +++ +CK G+   A      M +  +  +  
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +IDG CK G+L  A +L +EME   I+ ++ TYNILI G C  G+ +    LL+ M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  I  NVVT++ LID + KEG + +A  +  +M  +G+ P+ +T++SLIDG CK  ++
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  +   MV K   P++  F  LI+G  K   + + L L+++M    +     T ++L
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  + G+++ A   F E   +       PN V Y  ++  LC +G+  KA ++F  + 
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRK----VPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              +  D   Y  ++ G+  A ++ D   L   +   G+ P      +M+ G  + G L 
Sbjct: 599 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 658

Query: 561 SA 562
            A
Sbjct: 659 EA 660



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 219/437 (50%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +MI     PTV+ ++ L   +    +     ++ + M   G+  NLYT + +++
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+   +  A     +++    +PN +TF  L++GLC  G +  A      M + G  P
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 289

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++   N L++G C +G   EAM L  +M ++   P+  TY  ++  +C  GQ   A  LL
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I  + V Y+ +IDG CK G ++ A ++ ++M  KG+  N++T++ LI G C A
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  D    L  +M+ + + P+VV F+ LID   K+G ++E   L+KEM+   I P   T 
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 469

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G  K   +  A     +  D      C PN   +  +I   C   +I    +LF 
Sbjct: 470 TSLIDGFCKENHLDKAN----QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M    +  D  TY T+++G     ++     L  +M+   + P+ V  ++++ G  +NG
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 558 DLKSAFRCSEFLKESRI 574
           + + A    E +++S++
Sbjct: 586 ESEKALEIFEKIEKSKM 602



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 208/420 (49%), Gaps = 4/420 (0%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D   + + +M+    +  V+ +  L             L L  +M  KGI   +   +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I+I+  C   K+  A S    + + G  PN  T++ L++G C    V+ ALE    M+  
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             +P+++T   L++GLC  G+   A      M ++G  PN   Y  +++  CK+G    A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M L  +ME+  I  D   Y+I+I GLC  G L+ A  L  +M  +GI  N++TYN LI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C  G  +    +   M ++ + PNVVTFS LID   K G +  A  L+ EM+ + + PD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + +T+LIDG  K+ ++ +  ++   M+     P++ T + LI+G  K  RI + L  F 
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           + + +        + V Y  +IQ  C  G++  A +LF +M S  + P+  TY  +L GL
Sbjct: 526 KMSLRG----VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 199/398 (50%), Gaps = 5/398 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   +  ++    + G    A+ + RK+E     L A++  + +++GL K G  D+ +  
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNL 383

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM + G+  +++TY +LI   C  G       L  +MI + I P VV +++LI     
Sbjct: 384 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EAE + + M   G+ P+  TY +L+DG+CK   +++A +    M+     PN+ T
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 503

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L++G CK   +      F  M+  GV  +   YN LI G C+ G L  A  L  EM 
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             ++ P++ TY IL+ GLC  G+ E A  + +K+ K  +  ++  YN +I G C    ++
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   +  KGV+P V T++ +I G CK G +  A  L+ +M      PD   +  LI
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                DG+  ++++L +E+     +    T+  +I  L
Sbjct: 684 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 5/346 (1%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQA 86
           H    + FN  N +E+     ++  ++ LI  F   G  ++   + R   K ++ P +  
Sbjct: 374 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            + L++  +K+GK     E ++EM+  G+  D +TY  LID  C +  + KA  + D M+
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            KG +P +  + ILI+G C  N++ +   +FR M   GVV +  TYN L+ G+C++  +N
Sbjct: 494 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A E + EM+   + PN+VT+ +L+DGLC  GE   A   F  + K  +  +I +YN +I
Sbjct: 554 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 613

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C A  + +A  L   +    + P V TYNI+I GLC  G L  AE L +KM ++G  
Sbjct: 614 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 673

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            +  TYN LI  +  +GD  K++ +  ++   G   +  T   +ID
Sbjct: 674 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 185/367 (50%), Gaps = 3/367 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K +   +S +I    + G ++ A  ++ ++E   +   I   N L+ G    G++D   +
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M+   +  +VVT+ VLID    +G + +A  L  EMI +GI P  + YT LI G C
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            EN + +A  M   M   G  PN+ T+N L++GYCK   ++  LE + +M    +  + V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G C++G+L  A   F  M    V PNI  Y  L+DG C  G   +A+ +  ++
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK ++  D+  YNI+I G+C   +++ A  L   +  +G+   V TYN +I G CK+G +
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A  +  +M E G  P+  T++ LI      G+   ++ L  E+       D      +
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 406 IDGLSKD 412
           ID LS D
Sbjct: 718 IDMLSDD 724



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 4/164 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ +M+    +P V+ F+ L   ++K       L L K+M    I  +++T+S +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  ++  A +  + K  K   GY  PN + ++ +I  LC +G++ +A +L   M 
Sbjct: 228 INCFCRCRKLCLAFSA-MGKIIKL--GY-EPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
               +PD  T  T++ GL  + +  + M+L+  M++ G  P+AV
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/503 (31%), Positives = 254/503 (50%), Gaps = 12/503 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ L+        +E+A   L   +++  +P     NAL++G  K   F   ++F  EM
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V    +  VVTY  ++D  C  G    A+ L DEM DKG  P +  Y +++ GLC E K+
Sbjct: 72  VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ M   M   G  P++ TYN+ + G CK   V+ A +F   M    + P+VV++  +
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTV 188

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK G+L +A      M   G  P++  Y+ LIDG CK G +  AM L   M K   
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++  YN L+  L  +G +  AE +L +M + G   +VV+YN+ IDG CK   ++KA +
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M E+G  PN  ++S L++  CK   +D A+ L  +   K  + D++++T L+DGL 
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368

Query: 411 KDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           K G   E   L+ ++L+ KI  P VF  + ++    K  +I  AL    +  ++      
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN----- 423

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             N V +  ++  LC D ++  A  +   M  +   PD  TY T++  + +  +    + 
Sbjct: 424 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483

Query: 530 LLADMIKMGIVPDAVINQVMVRG 552
           L  + +K G VPD V    ++ G
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITG 506



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 218/421 (51%), Gaps = 8/421 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MIDK  +P    + IL+ GLC  N++ +A  +   M+E G VP+   YNAL+ GY K  D
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
             +A +F  EM+ ++  P VVT+  ++DGLCK G  + A      M   G  PNI+ YN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +++G C+   L EA  +  EM      PDV TYN  IKGLC   +++ A   L +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +VV+Y ++I+G CK GD++ A  +  QMT +G  P+VVT+SSLIDG CK G ++ AM
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           GL   M+     P++V + +L+  L + G++ +   +  EM     TP V + ++ I GL
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  R+  A   F    ++     C+PN   Y+ +++ LC   ++  A  L    R    
Sbjct: 298 CKAERVKKAKAVFDRMVERG----CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ 353

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV-PDAVINQVMVRGYQENGDLKSAF 563
             D   YT +L GL +  R  +   L + ++   I  PD     VM+  + +   +  A 
Sbjct: 354 IVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKAL 413

Query: 564 R 564
           +
Sbjct: 414 Q 414



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 216/468 (46%), Gaps = 42/468 (8%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D  T+ +L+   C    + KA  L   M + G  P   IY  LI G        +A    
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M +   +P + TY  ++DG CK      A++   EM      PN+ T+ V+++GLC+ 
Sbjct: 69  AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            +L  A      MA  G FP++  YN  I G CK   + EA    + M    ++PDV +Y
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSY 185

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             +I GLC  G L+ A  +L +M   G   +VVTY+SLIDG+CK G++E+A+ +   M +
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  PN+V ++SL+    + G+I  A  +  EM  +   PDVV + A IDGL K   +K+
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              ++  M+E   TP+  + S L+  L K   + +A+    +  +K    Y   + +LY 
Sbjct: 306 AKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK----YQIVDILLYT 361

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNL-RPD----------------------------- 507
            ++  LC  G+  +A  LFS +  + +  PD                             
Sbjct: 362 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421

Query: 508 -NC----TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            NC    T+  ++ GL    R+ D   +L  M+  G +PD V    +V
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 232/492 (47%), Gaps = 37/492 (7%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGK 99
           L  + +  + P V  +++ I    +   ++EA     ++ V P + +   ++NGL K G 
Sbjct: 138 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD 197

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            DS     ++M   G   DVVTY  LID  C  G+V +A+ L D M+  G  P +V Y  
Sbjct: 198 LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 257

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           L+  L     + +AE M   M   G  P++ +YNA +DG CK   V +A   +  M+   
Sbjct: 258 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             PN  ++ +L++ LCK  EL  A        +     +I +Y  L+DG CK G   EA 
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEAC 377

Query: 280 SLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +L S++   +I  PDVF YN+++   C   Q++ A  + ++M +     NVVT+N L+ G
Sbjct: 378 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHG 436

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C +  +  A ++   M ++G  P+ VT+ +L+D  CK G   AA+ L+ E V    VPD
Sbjct: 437 LCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 496

Query: 399 VVVFTALIDGL----------------------------SKDGNMKETLRLYKEMLEAKI 430
           VV ++ALI GL                            +++G+    L+L+ E++E+ +
Sbjct: 497 VVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDV 556

Query: 431 TPSVFTVSSLIHG-LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            P+  T    I G L K   +  A   F    D+   G   P+  +   +I      G +
Sbjct: 557 EPNARTFGKEISGKLVKAESLGKARGLF----DRAVKGGFFPDLFVANTLIDVFAKCGDL 612

Query: 490 LKASKLFSDMRS 501
            +A ++F  M+ 
Sbjct: 613 EEARRIFYSMKQ 624


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 258/513 (50%), Gaps = 7/513 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           P F  S  +T          ++EAL  + ++   +  P+    N LL  + K     ++ 
Sbjct: 6   PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 65

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M   G+  DV T  ++I+  C    V  A +   +++  G +P    +T LI GL
Sbjct: 66  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 125

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E K+ EA  +F  M   G  PN+ TY  L++G CK   V  A   + EM+   + PN+
Sbjct: 126 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNI 185

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ GLCK+ E +        M    + P++F  N ++D  CK G + EA  +   
Sbjct: 186 VTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDM 245

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + P+V TYN L+ G C   +++ A  +   M  +  +ANV++YN+LI+GYCK   
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++KA+ +  +M+ + + PN VT+++LI G C  G +  A+ L+ EMV +  +PD+V +  
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L D L K+ ++ + + L K +  +   P +   ++++ G+ + G + +A + F   + K 
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN   Y  +I  LC  G + +ASKLFS+M  +   P++CTY  + RG LR    
Sbjct: 426 ----LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 481

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           L  + LL +M+  G   D     ++V    ++G
Sbjct: 482 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 224/424 (52%), Gaps = 10/424 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE------ALWVYRKIEVLPA 83
           K H    S+   ++S  IP   P V+ TL I  + + H+        AL    K+   P 
Sbjct: 59  KHHSTLLSLSRQMDSFGIP---PDVY-TLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 114

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
                 L+ GL  +GK       +++M+  G   +VVTYG LI+  C    V +A N+F 
Sbjct: 115 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFS 174

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EMI KGI P +V Y  LIHGLC   +     ++   M +  ++P+++T N ++D  CK  
Sbjct: 175 EMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG 234

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            V  A +    M+H  ++PNVVT+  LMDG C   E+  A   F  M       N+  YN
Sbjct: 235 MVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYN 294

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI+G+CK  ++ +AM L  EM + E++P+  TYN LI GLC VG+L+ A  L  +M   
Sbjct: 295 TLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 354

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G + ++VTY +L D  CK   ++KA+++   +     +P++  +++++DG C+AG ++ A
Sbjct: 355 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 414

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L++ +  K L P+V  +  +I GL K G + E  +L+ EM +   +P+  T + +  G
Sbjct: 415 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 474

Query: 444 LFKN 447
             +N
Sbjct: 475 FLRN 478



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 151/593 (25%), Positives = 258/593 (43%), Gaps = 75/593 (12%)

Query: 67  HIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           H+++A+ + + IE     P IQ    +L+G+ + G+ +   + +  +   GL  +V TY 
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           ++I   C QG + +A  LF EM   G  P    Y ++  G    N+ +    +   M   
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494

Query: 184 GVVPNLYTYNALM-----DGY--------CKVADVNR----------------------- 207
           G   ++ T   L+     DG         CK +  +R                       
Sbjct: 495 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHS 554

Query: 208 ----------ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
                     AL  ++ MLH +  P+ V F  L+  + K+       +    M  FG+ P
Sbjct: 555 RSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPP 614

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE----------------------ISPDVF 295
           +++  N LI+  C    L  A S+ +++ K                        ISPD+F
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIF 674

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN LI  LC + + +    LL +M    I+ NVV +++++D  CKEG +  A  V   M
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++GVEP+VVT+++L+DG C    +D A+ ++  MV K  VP+V  +  LI+G  +   M
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            + + L ++M    +     T ++LIHGL   GR+ +A+  F E           P+ V 
Sbjct: 795 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ----IPDLVT 850

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++  LC +  + +A  L   +   NL  D   Y   + G+ RA  +     L +++ 
Sbjct: 851 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 910

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
             G+ PD     +M+ G  + G L  A +    + E+ I S+ T     +S +
Sbjct: 911 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLI 963



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 210/418 (50%), Gaps = 26/418 (6%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           P FN       + +F+ M H+             P+      LL  + K   + +V    
Sbjct: 557 PHFN--TLDDALSSFNRMLHMHPP----------PSTVDFTKLLTSIAKMKHYSTVLSLS 604

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G+  DV T  +LI+  C    +  A ++  +++  G +P VV Y  L++GLC  
Sbjct: 605 TQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-- 662

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM+            G+ P+++TYN+L+   C + +        +EM++  + PNVV F
Sbjct: 663 -KMITK----------GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 711

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++D LCK G +  A +    M K GV P++  Y  L+DGHC    + EA+ +   M  
Sbjct: 712 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 771

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+V +YNILI G C + +++ A GLL++M  +G++A+ VTYN+LI G C  G ++ 
Sbjct: 772 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 831

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+++  +M   G  P++VT+  L+D  CK  ++  AM L   +   +L  D++V+   ID
Sbjct: 832 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 891

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           G+ + G ++    L+  +    + P V T + +IHGL K G +  A N    K D+ D
Sbjct: 892 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA-NKLFRKMDEND 948



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/604 (24%), Positives = 243/604 (40%), Gaps = 107/604 (17%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNAL 90
           V   +N +   K  P VF+  T++ A  + G + EA     + ++R +E  P +   NAL
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNAL 261

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G   + + D   + ++ MV    VA+V++Y  LI+  C    V KA+ LF+EM  + +
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL--------------- 195
            P  V Y  LIHGLC+  ++ +A S+F  M   G +P+L TY  L               
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 196 --------------------MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
                               +DG C+  ++  A + +  +    LQPNV T+ +++ GLC
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G L  A   F  M K G  PN   YN +  G  +       + L  EM     S DV 
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501

Query: 296 TYNILIKGLCGVG----------------------------------------------Q 309
           T  +L+  L   G                                               
Sbjct: 502 TTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNT 561

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L+ A     +M       + V +  L+    K       LS+ +QM   G+ P+V T + 
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI+  C    +  A  +  +++     PDVV +  L++GL K             M+   
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKG 668

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I+P +FT +SLIH L       +      E  +        PN V+++ ++ ALC +G I
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK----IMPNVVVFSTVVDALCKEGMI 724

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A  +   M    + PD  TYT ++ G      M + + +   M+  G VP+     ++
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784

Query: 550 VRGY 553
           + GY
Sbjct: 785 INGY 788



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 4/307 (1%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   +N L+    K  +    +SL  +M+ F I PDV+T  I+I  LC + +++ A   
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L K+ K G   +  T+ +LI G C EG + +AL +  +M  +G +PNVVT+ +LI+G CK
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +  A  +++EM+ K + P++V + +LI GL K    K    L  EM+++KI P VFT
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           +++++  L K G ++ A +      D        PN V Y A++   C   ++  A K+F
Sbjct: 223 LNTVVDALCKEGMVAEAHDV----VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M   +   +  +Y T++ G  + + +   M L  +M +  + P+ V    ++ G    
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338

Query: 557 GDLKSAF 563
           G L+ A 
Sbjct: 339 GRLQDAI 345



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 4/218 (1%)

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++ALS  ++M  K   P+ V F+ L+    K  +    + L  +M    + PDV     
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+ L     +        ++L+    P   T ++LI GL   G+I  AL+ F    DK 
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF----DKM 141

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
            G    PN V Y  +I  LC D Q+ +A  +FS+M +  + P+  TY +++ GL +    
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             V  L+ +M+   I+PD      +V    + G +  A
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 239



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E L  +  ML  +  PS    + L+  + K    S  L+     + + D     P+  
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL----SRQMDSFGIPPDVY 81

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             A +I +LC+  ++  A    + +     +PD  T+TT++RGL    ++ + + L   M
Sbjct: 82  TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           I  G  P+ V    ++ G  ++  +  AF
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAF 170


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 268/516 (51%), Gaps = 6/516 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K   LP+I   N LL+ + K  KFD V    E+M    +V  + TY +LI+C C +  + 
Sbjct: 40  KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 99

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL L  +M+  G EP++V  + L++G C+  ++ +A ++   M E G  P+  T+  L+
Sbjct: 100 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 159

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QPN+VT+GV+++GLCK G+   A N    M    + 
Sbjct: 160 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 219

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ ++N +ID  CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M ++ I  N+VT+N+LID + KEG   +A  +   M ++ ++P++ T++SL++G C 
Sbjct: 280 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  MV K   PDVV +  LI G  K   +++   L++EM    +     T
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GLF +G   NA   F +    +DG    P+ + Y+ ++  LC +G++ KA ++F
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMV--SDG--VPPDIMTYSILLDGLCNNGKLEKALEVF 455

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M+   ++ D   YTTM+ G+ +A ++ D   L   +   G+ P+ V    M+ G    
Sbjct: 456 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 515

Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
             L+ A+   + +KE   G     G        HL+
Sbjct: 516 RLLQEAYALLKKMKED--GPLPNSGTYNTLIRAHLR 549



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF  M+     P++V +  L+  +    K     S+   M+   +V  LYTYN L++
Sbjct: 31  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 91  CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +  LI G   H KA    EA++L   M +    P++ TY +++ GLC  G  + A 
Sbjct: 151 DTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM    I A+VV +N++ID  CK   ++ AL++  +M  KG+ PNVVT+SSLI   
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ K + P++V F ALID   K+G   E  +LY +M++  I P +
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT +SL++G   + R+  A   F     K     C P+ V Y  +I+  C   ++   ++
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKD----CFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  D  TYTT+++GL       +   +   M+  G+ PD +   +++ G  
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 555 ENGDLKSAFRCSEFLKESRI 574
            NG L+ A    +++++S I
Sbjct: 444 NNGKLEKALEVFDYMQKSEI 463



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 210/404 (51%), Gaps = 5/404 (1%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           IL +GL ++ K+ +A  +F  M +   +P++  +N L+    K+   +  +    +M   
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            +   + T+ +L++  C+  ++  A      M K G  P+I   + L++G+C    + +A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           ++L  +M +    PD  T+  LI GL    +   A  L+ +M + G   N+VTY  +++G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK GD + AL++ ++M    +E +VV F+++ID  CK  ++D A+ L+ EM  K + P+
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV +++LI  L   G   +  +L  +M+E KI P++ T ++LI    K G+   A   + 
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           +   ++      P+   Y +++   C   ++ KA ++F  M S +  PD  TY T+++G 
Sbjct: 317 DMIKRS----IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++KR+ D   L  +M   G+V D V    +++G   +GD  +A
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 416



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 5/255 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P +F+  +L+  F     +++A  ++  +   +  P +   N L+ G  K  + +   E
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM   GLV D VTY  LI      GD   A  +F +M+  G+ P ++ Y+IL+ GLC
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N  K+ +A  +F  M++  +  ++Y Y  +++G CK   V+   + +  +    ++PNVV
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++ GLC    L+ A      M + G  PN   YN LI  H + G+   +  L  EM
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563

Query: 286 EKFEISPDVFTYNIL 300
                  D  T  ++
Sbjct: 564 RSCRFVGDASTIGLV 578



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 3/184 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G  + A  V++++    V P I   + LL+GL   GK +   E ++ M
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D+  Y  +I+  C  G V    +LF  +  KG++P VV Y  +I GLC++  +
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA ++ + M+E G +PN  TYN L+  + +  D   + E   EM       +  T G++
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 578

Query: 231 MDGL 234
            + L
Sbjct: 579 ANML 582


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 234/430 (54%), Gaps = 7/430 (1%)

Query: 141 LFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           LFDE+    D+    + +++ +L+   C   +  EA   F  M+E G+VP + T N ++ 
Sbjct: 163 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 222

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            + K+  +  A   Y EM    +   V TF ++++ LCK G+L+ A  F   M   G  P
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 282

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  YN +I G+   GN+  A  +   M    I PD +TY  LI G+C  G+LE A GL 
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM + G++ N VTYN+LIDGYC +GD+E+A S   +M +KG+ P+V T++ L+      
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 402

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +  EM  K ++PD + +  LI+G S+ GN K+   L+ EML   I P+  T 
Sbjct: 403 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 462

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI+ L +  R+  A + F +  D+      SP+ +++ A++   C +G + +A  L  
Sbjct: 463 TSLIYVLSRRNRMKEADDLFEKILDQG----VSPDVIMFNAMVDGHCANGNVERAFMLLK 518

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M   ++ PD  T+ T+++G  R  ++ +  MLL +M + GI PD +    ++ GY   G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578

Query: 558 DLKSAFRCSE 567
           D+K AFR  +
Sbjct: 579 DIKDAFRVRD 588



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 214/365 (58%), Gaps = 5/365 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F P+V  ++T+I  +S  G+IE A  +   + V    P      +L++G+ K+G+ +   
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +++MV  GLV + VTY  LID  C +GD+ +A +  DEM+ KGI P+V  Y +L+H L
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             E +M EA+ M + MR+ G++P+  TYN L++GY +  +  +A + ++EML   ++P  
Sbjct: 400 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 459

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+  L +   ++ A + F  +   GV P++ ++N ++DGHC  GN+  A  L  E
Sbjct: 460 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 519

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++  + PD  T+N L++G C  G++E A  LL +M + GI  + ++YN+LI GY + GD
Sbjct: 520 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 579

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  V  +M   G  P ++T+++LI   CK    D A  L  EMV K + PD   + +
Sbjct: 580 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 639

Query: 405 LIDGL 409
           LI+G+
Sbjct: 640 LIEGM 644



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 242/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  L+    E+   +EA    ++ ++  ++P I+ CN +L+  +K  + +  W  Y EM
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + V T+ ++++  C +G + KA      M   G +P VV Y  +IHG  +   +
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +  +MR  G+ P+ YTY +L+ G CK   +  A   + +M+   L PN VT+  L
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G+L  A ++   M K G+ P++  YN L+      G + EA  +  EM K  I
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYNILI G    G  + A  L  +M  +GI    VTY SLI    +   M++A  
Sbjct: 421 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 480

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++ ++GV P+V+ F++++DG C  GN++ A  L  EM  KS+ PD V F  L+ G  
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 540

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E   L  EM    I P   + ++LI G  + G I +A   F  + +    G+ +
Sbjct: 541 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA---FRVRDEMLSIGF-N 596

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+I+ LC + +   A +L  +M +  + PD+ TY +++ G+
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 232/472 (49%), Gaps = 14/472 (2%)

Query: 105 EFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           E ++E+ L      V   + + +L+  CC      +A   F  M +KGI P +     ++
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
                 N+M  A  ++  M    +   +YT+N +++  CK   + +A EF   M     +
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVV++  ++ G    G +  A      M   G+ P+ + Y  LI G CK G L EA  L
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M +  + P+  TYN LI G C  G LE A     +M K+GI+ +V TYN L+     
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG M +A  +  +M +KG+ P+ +T++ LI+G  + GN   A  L+ EM+ K + P  V 
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T+LI  LS+   MKE   L++++L+  ++P V   ++++ G   NG +  A     E  
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K+      P+ V +  ++Q  C +G++ +A  L  +M+   ++PD+ +Y T++ G  R 
Sbjct: 522 RKS----VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN--GDLKSAFRCSEFLKE 571
             + D   +  +M+ +G  P  +    +++   +N  GDL       E LKE
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL-----AEELLKE 624


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 268/516 (51%), Gaps = 6/516 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K   LP+I   N LL+ + K  KFD V    E+M    +V  + TY +LI+C C +  + 
Sbjct: 78  KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL L  +M+  G EP++V  + L++G C+  ++ +A ++   M E G  P+  T+  L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QPN+VT+GV+++GLCK G+   A N    M    + 
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ ++N +ID  CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M ++ I  N+VT+N+LID + KEG   +A  +   M ++ ++P++ T++SL++G C 
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  MV K   PDVV +  LI G  K   +++   L++EM    +     T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GLF +G   NA   F +    +DG    P+ + Y+ ++  LC +G++ KA ++F
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMV--SDG--VPPDIMTYSILLDGLCNNGKLEKALEVF 493

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M+   ++ D   YTTM+ G+ +A ++ D   L   +   G+ P+ V    M+ G    
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553

Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
             L+ A+   + +KE   G     G        HL+
Sbjct: 554 RLLQEAYALLKKMKED--GPLPNSGTYNTLIRAHLR 587



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF  M+     P++V +  L+  +    K     S+   M+   +V  LYTYN L++
Sbjct: 69  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +  LI G   H KA    EA++L   M +    P++ TY +++ GLC  G  + A 
Sbjct: 189 DTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM    I A+VV +N++ID  CK   ++ AL++  +M  KG+ PNVVT+SSLI   
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ K + P++V F ALID   K+G   E  +LY +M++  I P +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT +SL++G   + R+  A   F     K     C P+ V Y  +I+  C   ++   ++
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKD----CFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  D  TYTT+++GL       +   +   M+  G+ PD +   +++ G  
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 555 ENGDLKSAFRCSEFLKESRI 574
            NG L+ A    +++++S I
Sbjct: 482 NNGKLEKALEVFDYMQKSEI 501



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 210/404 (51%), Gaps = 5/404 (1%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           IL +GL ++ K+ +A  +F  M +   +P++  +N L+    K+   +  +    +M   
Sbjct: 56  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            +   + T+ +L++  C+  ++  A      M K G  P+I   + L++G+C    + +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           ++L  +M +    PD  T+  LI GL    +   A  L+ +M + G   N+VTY  +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK GD + AL++ ++M    +E +VV F+++ID  CK  ++D A+ L+ EM  K + P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV +++LI  L   G   +  +L  +M+E KI P++ T ++LI    K G+   A   + 
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           +   ++      P+   Y +++   C   ++ KA ++F  M S +  PD  TY T+++G 
Sbjct: 355 DMIKRS----IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++KR+ D   L  +M   G+V D V    +++G   +GD  +A
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 5/255 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P +F+  +L+  F     +++A  ++  +   +  P +   N L+ G  K  + +   E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM   GLV D VTY  LI      GD   A  +F +M+  G+ P ++ Y+IL+ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N  K+ +A  +F  M++  +  ++Y Y  +++G CK   V+   + +  +    ++PNVV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++ GLC    L+ A      M + G  PN   YN LI  H + G+   +  L  EM
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601

Query: 286 EKFEISPDVFTYNIL 300
                  D  T  ++
Sbjct: 602 RSCRFVGDASTIGLV 616



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 3/184 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G  + A  V++++    V P I   + LL+GL   GK +   E ++ M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D+  Y  +I+  C  G V    +LF  +  KG++P VV Y  +I GLC++  +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA ++ + M+E G +PN  TYN L+  + +  D   + E   EM       +  T G++
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616

Query: 231 MDGL 234
            + L
Sbjct: 617 ANML 620


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 255/472 (54%), Gaps = 22/472 (4%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA 83
           +L+KS+  H    +V +    +E    NP +F           H  + +  +      P 
Sbjct: 85  SLVKSKHYH----TVLSLSQQMEFEGINPVLF--------HFQHPHQLMGYH------PN 126

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
                 L+ GL  KG+      F++ +V  G   D V YG LI   C  G+   AL+L  
Sbjct: 127 TITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 186

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            +    ++P VV+Y+ +I G+C +  + +A  ++  M   G+ PN+ TY+AL+ G+  V 
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            +  A++ +++M+  N++P+V TF +L+DG CK G+++     F  M K G+ PN+  Y 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+DG+C    + +A S+   M +  ++PD+ +YNILI G C + +++ A  L ++M+ +
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            I+ +VVTYNSLIDG CK G +  AL +  +M ++GV P+++T+SS++D  CK   +D A
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L T++  + + P++  +T LIDGL K G +++   +++++L      +V T + +IHG
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
               G    AL    +  D +    C P+ V Y  II++L    +  KA KL
Sbjct: 487 FCNKGLFDEALALLSKMKDNS----CIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 263/512 (51%), Gaps = 26/512 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           K N   +S++   F     + +A  ++    R+    PAI+  N +L  L+K   + +V 
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIE-FNKILGSLVKSKHYHTVL 96

Query: 105 EFYEEM----------------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
              ++M                 L G   + +T+  LI   C +G + +AL   D ++  
Sbjct: 97  SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM 156

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G +   V Y  LIHGLC   +   A  + R +    V PN+  Y+ ++DG CK   VN A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            + Y EM+   + PNVVT+  L+ G   VG+L+ A + F  M    + P+++ +N L+DG
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK G + E  ++ + M K  I P+V TY  L+ G C V ++  A+ +L  M + G+  +
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           + +YN LIDG+CK   +++A+++  +M  K + P+VVT++SLIDG CK G I  A+ L  
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  + + PD++ +++++D L K+  + + + L  ++ +  I P+++T + LI GL K G
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           R+ +A N F    D    GY    +  Y  +I   C  G   +A  L S M+ ++  PD 
Sbjct: 457 RLEDAHNIF---EDLLVKGYNITVNT-YTVMIHGFCNKGLFDEALALLSKMKDNSCIPDA 512

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            TY  ++R L   K   D    L +MI  G++
Sbjct: 513 VTYEIIIRSLFD-KDENDKAEKLREMITRGLL 543



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 244/471 (51%), Gaps = 20/471 (4%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI---------HGLCNEN 168
           + + Y  +        DV+ A +LF  ++ +   P  + +  ++         H + + +
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 169 KMVEAESM------FRSMREC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + +E E +      F+   +  G  PN  T+  L+ G C    +++AL F+  ++    Q
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            + V +G L+ GLCKVGE RAA +    +    V PN+ +Y+ +IDG CK  ++ +A  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            SEM    ISP+V TY+ LI G   VGQL+ A  L  KM  E I  +V T+N L+DG+CK
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           +G M++  +V + M ++G++PNVVT+ SL+DG C    ++ A  +   M  + + PD+  
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  LIDG  K   + E + L+KEM    I P V T +SLI GL K G+IS AL    E  
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+       P+ + Y++I+ ALC + Q+ KA  L + ++   +RP+  TYT ++ GL + 
Sbjct: 400 DRG----VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            R+ D   +  D++  G         VM+ G+   G    A      +K++
Sbjct: 456 GRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDN 506



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 186/403 (46%), Gaps = 20/403 (4%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK------VGELR 241
           N   Y+++   +    DV  A   +  +L  N  P  + F  ++  L K      V  L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 242 AAGNF---------FVHMAKF-GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
               F         F H  +  G  PN   +  LI G C  G + +A+     +      
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D   Y  LI GLC VG+   A  LL+++    +  NVV Y+++IDG CK+  +  A  +
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S+M  KG+ PNVVT+S+LI G    G +  A+ L+ +M+++++ PDV  F  L+DG  K
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           DG MKE   ++  M++  I P+V T  SL+ G      ++ A +     + +      +P
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG----VNP 335

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +   Y  +I   C   ++ +A  LF +M   ++ PD  TY +++ GL +  ++   + L+
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M   G+ PD +    ++    +N  +  A      LK+  I
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 264/502 (52%), Gaps = 10/502 (1%)

Query: 10  LYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIE 69
           LY +A+ L+  V    ++S+       S+ + L   E  K    ++  +I A+ +   ++
Sbjct: 54  LYSHAQSLLLQVISGKIQSQ--FFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLD 111

Query: 70  EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            +++ + ++     +P     N LL  ++    F+  W F+ E  +  +V DV ++G++I
Sbjct: 112 SSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI-KVVLDVYSFGIVI 170

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             CC  G++ K+ +L  E+ + G  P VVIYT LI G C + ++ +A+ +F  M + G+V
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV 230

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
            N +TY  L+ G  K     +  E Y +M  H + PN+ T+  +M+ LCK G  + A   
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKV 290

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + GV  NI  YN LI G C+     EA  +  +M+ + I+P++ TYN LI G C 
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCS 350

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           VG+L  A  L + +   G+  ++VTYN L+ G+C++GD   A  +  +M E+G++P+ VT
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ LID   ++ N++ A+ L + M    LVPDV  ++ LI G    G M E  RL+K M+
Sbjct: 411 YTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E  + P+    +++I G  K G    AL  F +  +K      +PN   Y+ +I+ LC +
Sbjct: 471 EKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE----LAPNVASYSYLIRVLCKE 526

Query: 487 GQILKASKLFSDMRSDNLRPDN 508
            ++ +A  L   M    + P +
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSD 548



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  +++ Y +   ++ ++ +++EM+     P    F  L+  +           FF + +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF-NES 155

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K  V  +++ +  +I G C+AG + ++  L  E+ +F  SP+V  Y  LI G C  G++E
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ L  +M K G++AN  TY  LI G  K G  ++   +  +M E GV PN+ T++ ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +  CK G    A  ++ EM  + +  ++V +  LI GL ++    E  ++  +M    I 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++ T ++LI G    G++  AL+  L +  K+ G   SP+ V Y  ++   C  G    
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALS--LCRDLKSRG--LSPSLVTYNVLVSGFCRKGDTSG 391

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A+K+  +M    ++P   TYT ++    R+  M   + L + M ++G+VPD     V++ 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451

Query: 552 GYQENGDLKSAFR 564
           G+   G +  A R
Sbjct: 452 GFCIKGQMNEASR 464


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 245/468 (52%), Gaps = 10/468 (2%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L+  ++++  + +I+      L SRK      SVF A+      + +  VF  L+IA+ +
Sbjct: 111 LSAHQMFQECQSIIR-----FLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWD 165

Query: 65  MGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
            G + +A+  +R +      +P    C  LL+ +I      ++W FY E++  G    V 
Sbjct: 166 SGFVSDAIQCFRLVRNSNFQIP-FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQ 224

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
            Y +LI+  C +G +  A  +F+E+  +G+ PT V +  LI+GLC    + E   + ++M
Sbjct: 225 YYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTM 284

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E  + P+++TY+ L+ G CK   ++ A + + EM    L+PN +TF  L+DG C+   +
Sbjct: 285 EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRI 344

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A N +  M   GV P++ +YN L++G CK G++ +A  L  EM    + PD  TY  L
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTL 404

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G C  G LE A  + + M +EG++ + V + +LI G+C++G +  A     +M E G+
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +P+  T++ +IDG CK GN+     L  EM I    P V+ +  L++GL K G MK    
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L + ML   +TP   T + L+ G  KNG+  + L    EK    D  Y
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAY 572



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 191/347 (55%), Gaps = 4/347 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY E+L +   P V  + +L++  CK G +R A   F  + K G+ P    +N LI+G C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K+ NL E   L   ME+  I PDVFTY++LI GLC  G+L+ AE L  +M + G+  N +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LIDG C+   ++ A++   QM   GV+P++V +++L++G CK G+++ A  L  EM
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +  + PD + +T LIDG  K+G+++  + + K M E  +       ++LI G  ++GR+
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A     E  +        P+   Y  +I   C  G +    KL  +M+ +  +P   T
Sbjct: 450 RDAERTLREMVEAG----MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y  ++ GL +  +M +  MLL  M+ +G+ PD +   +++ G+ +NG
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 223/447 (49%), Gaps = 5/447 (1%)

Query: 85  QACNALLNGLI-KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           Q C +++  L+ +KGK  +   F   +   G       +  L+      G V  A+  F 
Sbjct: 118 QECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFR 177

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            + +   +        L+  + N N  V   + +  + E G  P +  YN L++ +CK  
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEG 237

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            +  A   ++E+    L+P  V+F  L++GLCK   L         M +  ++P++F Y+
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI G CK G L  A  L  EM++  + P+  T+  LI G C   +++ A     +M   
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTM 357

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  ++V YN+L++G CK GD+ KA  +  +M   G++P+ +T+++LIDG CK G++++A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M +   M  + +V D V FTALI G  +DG +++  R  +EM+EA + P   T + +I G
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K G +   + F L K  + +G    P  + Y  ++  LC  GQ+  A+ L   M +  
Sbjct: 478 YCKKGNVK--MGFKLLKEMQINGH--KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMML 530
           + PD+ TY  +L G  +  +  D++ L
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 156/310 (50%), Gaps = 7/310 (2%)

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+D    + +     +  SE+ ++   P V  YNILI   C  G +  A+ +  ++ K G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +    V++N+LI+G CK  ++++   +   M E  + P+V T+S LI G CK G +D A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM  + L P+ + FTALIDG  +   +   +  Y +ML   + P +   ++L++GL
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G ++ A        D+       P+ + Y  +I   C +G +  A ++   M  + +
Sbjct: 374 CKVGDVNKARKL----VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             DN  +T ++ G  R  R+ D    L +M++ G+ PD     +++ GY + G++K  F+
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 565 CSEFLKESRI 574
               LKE +I
Sbjct: 490 ---LLKEMQI 496


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 252/499 (50%), Gaps = 30/499 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++ L+  + +MG ++EA  V     +  +LP +   N L+NGL  +G+ +  ++  
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    L+ DVV+Y  LI+ C     + +A  L +EM +KG++P  V + I++   C E
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM +A +    M E G  P+  TYN L++GYCK  ++  A     EM   N++ + VT 
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC+  +L  A        K G F +   Y  LI G+ K GN+  A+ L  EM++
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EI P   TYN +I GLC  G+ E A   L ++ + G+L +  TYN+++ GYC+EGD+EK
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M E   +P+V T + L+ G C  G ++ A+ L+   V K    D V +  LI 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G + +   L  EM E ++ P  +T +++I  L  +GRI  A  F  +  +K    
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGX-- 694

Query: 468 YCSPNHVL-----------------------YAAIIQALCYDGQILKASKLFSDMRSDNL 504
              P  VL                       Y+  I+ LC +G+   A ++F + +   +
Sbjct: 695 --LPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGI 752

Query: 505 RPDNCTYTTMLRGLLRAKR 523
             D  TY  ++ GL++ ++
Sbjct: 753 TVDKSTYINLMDGLIKRRK 771



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 282/557 (50%), Gaps = 14/557 (2%)

Query: 24  NLLKSRKPHHVCYS--VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKI 78
           +L++    H V +S   FN    L I   N + F+ +I  +      ++A   L V  K 
Sbjct: 179 SLVRYPSSHSVSFSREAFNDAIKLGIVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
              P     N +L+ L KKG+     +   +M   GL+ +  TY +L+   C  G + +A
Sbjct: 238 NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            N+ + M    + P V  Y +LI+GLCNE ++ EA  +   M    ++P++ +YN L++G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             + + ++ A +   EM    ++PN VT  +++   CK G++  A N    M + G  P+
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD 417

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              YN LI+G+CKAGN+ EA     EM +  +  D  T N +++ LC   +LE A  LL 
Sbjct: 418 CVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
              K G   + V+Y +LI GY K+G++++AL +  +M EK + P+ VT++ +I G C+ G
Sbjct: 478 SARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCG 537

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A+    E++   L+PD   +  ++ G  ++G++++  + + +M+E    P VFT +
Sbjct: 538 KTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+ GL   G +  AL  F     K      + + V Y  +I +LC +G++  A  L S+
Sbjct: 598 ILLRGLCMEGMLEKALKLFNTWVSKGK----AIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI----NQVMVRGYQ 554
           M    L PD+ TY  ++  L  + R+ +    ++ M++ G +P  V+    N+ +V    
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSET 713

Query: 555 ENGDLKSAFRCSEFLKE 571
                 S+   SE++KE
Sbjct: 714 SEESDSSSVAYSEWIKE 730



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 262/543 (48%), Gaps = 16/543 (2%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
           L+ L +   + ++  T I A+ + G    A  +++K++ L   P +  CN LLN L++  
Sbjct: 125 LSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYP 184

Query: 99  KFDSV---WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
              SV    E + + +  G+V +V T+ ++I   C +     A+   + M      P  V
Sbjct: 185 SSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNV 244

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  ++  LC + ++ +A  +   M+  G++PN  TYN L+ GYCK+  +  A      M
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
             +NL P+V T+ +L++GLC  G +  A      M    + P++  YN LI+G  +   +
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  EM +  + P+  T+NI++K  C  G+++ A   + KM + G   + VTYN+L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+GYCK G+M +A     +M  K ++ + VT ++++   C+   ++ A  L +    +  
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA-- 453
             D V +  LI G  KDGN+   L+L+ EM E +I PS  T + +I GL + G+   A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 454 -LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            LN  LE           P+   Y  I+   C +G + KA +  + M  ++ +PD  T  
Sbjct: 545 KLNELLESG-------LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +LRGL     +   + L    +  G   D V    ++    + G L  AF     ++E 
Sbjct: 598 ILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657

Query: 573 RIG 575
            +G
Sbjct: 658 ELG 660


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 161/538 (29%), Positives = 266/538 (49%), Gaps = 31/538 (5%)

Query: 35   CYSVFNALNSL-EIPK----FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQA 86
            CY    A+    E P+    +N + ++ +I    ++G I+EA  +   +E+    P + +
Sbjct: 667  CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 726

Query: 87   CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
             + ++NG  + G+ D VW+  E M   GL  +   YG +I   C    + +A   F EMI
Sbjct: 727  YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786

Query: 147  DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             +GI P  V+YT LI G C    +  A   F  M    + P++ TY A++ G+C++ D+ 
Sbjct: 787  RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846

Query: 207  RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
             A + +HEM    L+P+ VTF  L++G CK G ++ A     HM + G  PN+  Y  LI
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906

Query: 267  DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            DG CK G+L  A  L  EM K  + P++FTYN ++ GLC  G +E A  L+ +    G+ 
Sbjct: 907  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966

Query: 327  ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            A+ VTY +L+D YCK G+M+KA  +  +M  KG++P +VTF+ L++G C  G ++    L
Sbjct: 967  ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026

Query: 387  YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
               M+ K + P+   F +L+       N+K    +YK+M    + P   T  +L+ G  K
Sbjct: 1027 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086

Query: 447  NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
               +  A   F E   K   G+ S +   Y+ +I+      + L+A ++F  MR + L  
Sbjct: 1087 ARNMKEAWFLFQEMKGK---GF-SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 1142

Query: 507  DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV--MVRGYQENGDLKSA 562
            D                  ++    +D    G  PD +++ +  ++  Y  +  L+ A
Sbjct: 1143 DK-----------------EIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 1183



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 260/510 (50%), Gaps = 14/510 (2%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEF 106
            +P VF        + G + EA  V+ K+    ++ ++ +CN  L  L K   K  +    
Sbjct: 617  DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + E    G+  +V +Y ++I   C  G + +A +L   M  KG  P V+ Y+ +++G C 
Sbjct: 677  FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              ++ +   +   M+  G+ PN Y Y +++   C++  +  A E + EM+   + P+ V 
Sbjct: 737  FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +  L+DG CK G++RAA  FF  M    + P++  Y  +I G C+ G++ EA  L  EM 
Sbjct: 797  YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               + PD  T+  LI G C  G ++ A  +   M + G   NVVTY +LIDG CKEGD++
Sbjct: 857  CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
             A  +  +M + G++PN+ T++S+++G CK+GNI+ A+ L  E     L  D V +T L+
Sbjct: 917  SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976

Query: 407  DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDK 463
            D   K G M +   + KEML   + P++ T + L++G   +G + +    LN+ L K   
Sbjct: 977  DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-- 1034

Query: 464  TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  +PN   + ++++  C    +  A+ ++ DM S  + PD  TY  +++G  +A+ 
Sbjct: 1035 -----IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089

Query: 524  MLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            M +   L  +M   G         V+++G+
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 241/476 (50%), Gaps = 18/476 (3%)

Query: 93   GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI-----DCCCGQGDVMKALNLFDEMID 147
            GL+++ +       +E+M+  GLV  V +  V +     DC         A+ +F E  +
Sbjct: 632  GLLREAR-----RVFEKMLNYGLVLSVDSCNVYLTRLSKDCY----KTATAIIVFREFPE 682

Query: 148  KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
             G+   V  Y I+IH +C   ++ EA  +   M   G  P++ +Y+ +++GYC+  ++++
Sbjct: 683  VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 742

Query: 208  ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
              +    M    L+PN   +G ++  LC++ +L  A   F  M + G+ P+  VY  LID
Sbjct: 743  VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 802

Query: 268  GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            G CK G++  A     EM   +I+PDV TY  +I G C +G +  A  L  +M+ +G+  
Sbjct: 803  GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 862

Query: 328  NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            + VT+  LI+GYCK G M+ A  V + M + G  PNVVT+++LIDG CK G++D+A  L 
Sbjct: 863  DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922

Query: 388  TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             EM    L P++  + ++++GL K GN++E ++L  E   A +     T ++L+    K+
Sbjct: 923  HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982

Query: 448  GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            G +  A     E      G    P  V +  ++   C  G +    KL + M +  + P+
Sbjct: 983  GEMDKAQEILKEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038

Query: 508  NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              T+ ++++       +     +  DM   G+ PD    + +V+G+ +  ++K A+
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 242/485 (49%), Gaps = 10/485 (2%)

Query: 84   IQACNALLNGLIKKGKF---DSVWEFYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKA 138
            ++   +L++   ++ K    DS  +F++ +V       +D   + V        G + +A
Sbjct: 578  LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 637

Query: 139  LNLFDEMIDKGIEPTVVIYTILIHGLCNE-NKMVEAESMFRSMRECGVVPNLYTYNALMD 197
              +F++M++ G+  +V    + +  L  +  K   A  +FR   E GV  N+ +YN ++ 
Sbjct: 638  RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 697

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
              C++  +  A      M      P+V+++  +++G C+ GEL         M + G+ P
Sbjct: 698  FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 757

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            N ++Y  +I   C+   L EA    SEM +  I PD   Y  LI G C  G +  A    
Sbjct: 758  NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 817

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             +M+   I  +V+TY ++I G+C+ GDM +A  +  +M  KG+EP+ VTF+ LI+G CKA
Sbjct: 818  YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 877

Query: 378  GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            G++  A  ++  M+     P+VV +T LIDGL K+G++     L  EM +  + P++FT 
Sbjct: 878  GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937

Query: 438  SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            +S+++GL K+G I  A+    E     +    + + V Y  ++ A C  G++ KA ++  
Sbjct: 938  NSIVNGLCKSGNIEEAVKLVGE----FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993

Query: 498  DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +M    L+P   T+  ++ G      + D   LL  M+  GI P+A     +V+ Y    
Sbjct: 994  EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 1053

Query: 558  DLKSA 562
            +LK+A
Sbjct: 1054 NLKAA 1058



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 8/368 (2%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +  A   + +ML++ L  +V +  V +  L K   +   A   F    + GV  N+  YN
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I   C+ G + EA  L   ME    +PDV +Y+ ++ G C  G+L+    L++ M ++
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  N   Y S+I   C+   + +A    S+M  +G+ P+ V +++LIDG CK G+I AA
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
              + EM  + + PDV+ +TA+I G  + G+M E  +L+ EM    + P   T + LI+G
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K G + +A   F         G CSPN V Y  +I  LC +G +  A++L  +M    
Sbjct: 874 YCKAGHMKDA---FRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+P+  TY +++ GL ++  + + + L+ +    G+  D V    ++  Y ++G++  A 
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA- 988

Query: 564 RCSEFLKE 571
              E LKE
Sbjct: 989 --QEILKE 994



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 26/410 (6%)

Query: 158 TILIHGLCNENKMVEAESMFRSMR--ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           T  +H + N  K+  AE + RS++  EC    +   +  LM   C   D    L+F+ + 
Sbjct: 499 TEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIW-VLMKIKC---DYRLVLDFF-DW 553

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                  N+ +  +++       +L+ A +    ++ F   P + V +  +         
Sbjct: 554 ARSRRDSNLESLCIVIHLAVASKDLKVAQSL---ISSFWERPKLNVTDSFV-------QF 603

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           F+   L    + +   P VF  ++  + L   G L  A  + +KM   G++ +V + N  
Sbjct: 604 FDL--LVYTYKDWGSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVY 659

Query: 336 IDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +    K+      A+ V  +  E GV  NV +++ +I   C+ G I  A  L   M +K 
Sbjct: 660 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 719

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             PDV+ ++ +++G  + G + +  +L + M    + P+ +   S+I  L +  +++ A 
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E   +       P+ V+Y  +I   C  G I  ASK F +M S ++ PD  TYT +
Sbjct: 780 EAFSEMIRQG----ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G  +   M++   L  +M   G+ PD+V    ++ GY + G +K AFR
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 885


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 244/489 (49%), Gaps = 11/489 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +   N L+  L  +G          +M   G   +VVTY  L+      G+V  A 
Sbjct: 146 VAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M+D G++P +V +  +++G+C   KM +A  +F  M   G+ P+  +YN L+ GY
Sbjct: 206 RLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK    + AL  + EM    + P+VVTF  L+  +CK G L  A      M + G+  N 
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +  LIDG CK G L +A+     M +  I P V  YN LI G C VG+++ A  LL +
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G+  +VVTY+++I  YCK  D   A  +  QM EKGV P+ +T+SSLI   C+   
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKR 445

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A  L+  M+   L PD   +T+LIDG  K+GN++  L L+ +M++A + P V T S 
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505

Query: 440 LIHGLFKNGRISNA----LNFFLEKTDKTDGGYCSPNHVLYA-------AIIQALCYDGQ 488
           LI+GL K+ R   A       + E+    +  Y +  H           A+++  C  G 
Sbjct: 506 LINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 565

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A K++  M   N   D   Y+ ++ G  RA  ++  +     M++ G  P++     
Sbjct: 566 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTIS 625

Query: 549 MVRGYQENG 557
           ++RG  ENG
Sbjct: 626 LIRGLFENG 634



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 223/428 (52%), Gaps = 5/428 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G V  V+ Y  ++        +  A   FD M+  G+ P V  Y ILI  LC      EA
Sbjct: 111 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            S+ R MR  G  PN+ TYN L+  + +  +V+ A      ML   L+PN+VTF  +++G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           +CK G++  A   F  M + G+ P+   YN L+ G+CKAG   EA+S+ +EM +  I PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V T+  LI  +C  G LE A  L+++M + G+  N VT+ +LIDG+CK+G ++ AL    
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M +  ++P+VV +++LI+G C  G +D A  L  EM  K L PDVV ++ +I    K+ 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           +      L ++MLE  + P   T SSLI  L +  R+S+A   F             P+ 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG----LQPDE 465

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y ++I   C +G + +A  L   M    + PD  TY+ ++ GL ++ R ++   LL  
Sbjct: 466 FTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFK 525

Query: 534 MIKMGIVP 541
           +     +P
Sbjct: 526 LYHEEPIP 533



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 206/380 (54%), Gaps = 5/380 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G VP++  YNA++      A +  A  F+  ML   + PNV T+ +L+  LC  G  + A
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            +    M   G  PN+  YN L+    +AG +  A  L   M    + P++ T+N ++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           +C  G++E A  +  +M +EG+  + V+YN+L+ GYCK G   +ALSV ++MT+KG+ P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF+SLI   CKAGN++ A+ L  +M  + L  + V FTALIDG  K G + + L   +
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M + +I PSV   ++LI+G    GR+  A     E   K       P+ V Y+ II A 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG----LKPDVVTYSTIISAY 405

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +     A +L   M    + PD  TY++++R L   KR+ D  +L  +MIK+G+ PD 
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465

Query: 544 VINQVMVRGYQENGDLKSAF 563
                ++ G+ + G+++ A 
Sbjct: 466 FTYTSLIDGHCKEGNVERAL 485



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 227/456 (49%), Gaps = 53/456 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+ AF   G ++ A  +   +    + P +   N+++NG+ K GK +   + +
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  GL  D V+Y  L+   C  G   +AL++F EM  KGI P VV +T LIH +C  
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A ++ R MRE G+  N  T+ AL+DG+CK   ++ AL     M    ++P+VV +
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCY 363

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C VG +  A      M   G+ P++  Y+ +I  +CK  +   A  L  +M +
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  TY+ LI+ LC   +L  A  L + M K G+  +  TY SLIDG+CKEG++E+
Sbjct: 424 KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQ--------------------------------- 374
           ALS+  +M + GV P+VVT+S LI+G                                  
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543

Query: 375 -----------------CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
                            C  G ++ A  +Y  M+ ++   D  V++ LI G  + GN+ +
Sbjct: 544 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  +K+ML+    P+  +  SLI GLF+NG +  A
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEA 639



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 5/318 (1%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  YN ++     A +L  A      M    ++P+V+TYNILI+ LCG G  + A
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L+ M   G   NVVTYN+L+  + + G+++ A  +   M + G++PN+VTF+S+++G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CKAG ++ A  ++ EM+ + L PD V +  L+ G  K G   E L ++ EM +  I P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T +SLIH + K G +  A+    +  ++        N V + A+I   C  G +  A 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERG----LQMNEVTFTALIDGFCKKGFLDDAL 345

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
                MR   ++P    Y  ++ G     RM +   LL +M   G+ PD V    ++  Y
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405

Query: 554 QENGDLKSAFRCSEFLKE 571
            +N D  SAF  ++ + E
Sbjct: 406 CKNCDTHSAFELNQQMLE 423



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 5/254 (1%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G + +V+ YN+++     +  +  A      M   GV PNV T++ LI   C  G+   A
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + +  +M      P+VV +  L+    + G +    RL   ML+  + P++ T +S+++G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           + K G++ +A   F E   +      +P+ V Y  ++   C  G   +A  +F++M    
Sbjct: 230 MCKAGKMEDARKVFDEMMREG----LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + PD  T+T+++  + +A  +   + L+  M + G+  + V    ++ G+ + G L  A 
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345

Query: 564 RCSEFLKESRIGSS 577
                +++ RI  S
Sbjct: 346 LAVRGMRQCRIKPS 359



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 5/220 (2%)

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+V+ +++++     A ++ +A   +  M+   + P+V  +  LI  L   G+ KE 
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L + ++M  A   P+V T ++L+   F+ G +  A        D    G   PN V + +
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLD----GGLKPNLVTFNS 225

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  +C  G++  A K+F +M  + L PD  +Y T++ G  +A    + + + A+M + G
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           I+PD V    ++    + G+L+ A      ++E  +  +E
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 61/135 (45%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           ALL G   KG  +   + Y+ M+      D   Y VLI   C  G+VMKAL+   +M+ +
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P       LI GL     +VEA+ + + +  C  + +     AL+D      +V+  
Sbjct: 615 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAV 674

Query: 209 LEFYHEMLHHNLQPN 223
           L+  H M    L P+
Sbjct: 675 LDVLHGMAKDGLLPS 689


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 246/474 (51%), Gaps = 12/474 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEV-----LPAIQACNALLNGLIKKGKFDSVW 104
           PS+  ++TL+ +F   G +++A  + R++E      LP+    N ++NGL +KG+ +   
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  + M +    A   T+  LI     +G V KA  L  EM ++GI PTVV Y  +IHG+
Sbjct: 289 QLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                +  A   F  MR  G++P+L TYN+L++GYCK  ++  AL  + ++    L P+V
Sbjct: 348 FRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSV 407

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+ +L+DG C++G+L  A  F   M + G  P++  Y  L++G  K  NL        E
Sbjct: 408 LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDE 467

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + PD F YN  I     +G    A  L + M   GI ++ VTYN  +DG CK G+
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  +  +M   G++P+ +T++ LI   C+ G +  A  ++  M++  L P  V +T 
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I    + GN+      +++MLE  + P+  T + LIH L + GR + A   F E  ++ 
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG 647

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                SPN   Y  +I   C +G   +A +L+S+M    + PD+CT+  + +G 
Sbjct: 648 ----LSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/554 (29%), Positives = 268/554 (48%), Gaps = 54/554 (9%)

Query: 52  PSVFSTL-IIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           PS  STL + AF EM H            V P I+ CN +L  L  + ++D +   Y EM
Sbjct: 173 PSTCSTLCLAAFREMAHHG----------VPPFIKECNLVLRALRDEARWDDMRSVYAEM 222

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYTILIHGLCNEN 168
           +  G+   +VTY  L+D    +G V +A  L  EM  +  G  P+ V Y ++I+GL  + 
Sbjct: 223 LQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKG 282

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ +A  +   MR      + +T+N L+ GY     V +A     EM +  + P VVT+ 
Sbjct: 283 ELEKAAQLVDRMRMSKKA-SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYN 341

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G+ + G + AA   FV M   G+ P++  YN LI+G+CKAGNL EA+ L  ++++ 
Sbjct: 342 TIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE------ 342
            ++P V TYNIL+ G C +G LE A    Q+M ++G   +V TY  L++G  K       
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 343 -----------------------------GDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
                                        G   +A  +   M  +G+  + VT++  +DG
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+GN+  A  L+ +MV   L PD + +T LI    + G ++E   ++  ML + + PS
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T +  IH   + G + +A  +F +  ++       PN V Y  +I ALC  G+   A 
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG----VRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           + F +M    L P+  TYT ++ G  +     + + L ++M + GI PD   +  + +G+
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697

Query: 554 QENGDLKSAFRCSE 567
            E G  K A +  E
Sbjct: 698 DE-GQSKHAIQYME 710



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 7/258 (2%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M   G+   +   N ++     E   +   SV ++M + G+EP++VT+++L+D   +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 377 AGNIDAAMGLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            G +D A  L  EM  +    +P  V +  +I+GL++ G +++  +L   M  +K   S 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASA 302

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT + LI G F  G +  A    LE  ++       P  V Y  II  +   G +  A  
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEG----IVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F +MR+  L PD  TY +++ G  +A  + + + L  D+ + G+ P  +   +++ GY 
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 555 ENGDLKSAFRCSEFLKES 572
             GDL+ A R  + + E 
Sbjct: 419 RLGDLEEARRFKQEMVEQ 436


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 169/539 (31%), Positives = 274/539 (50%), Gaps = 45/539 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +STL++  +++     A  VYR++     VL  I     ++N L K G   +   F  ++
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY-RTVVNALCKNGFVQAAEMFCCKV 154

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENK 169
           +  G   D      L+   C + D+ +A  +F++M  ++   P  V Y+ILIHGLC   +
Sbjct: 155 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGR 214

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  + + M E G  P+  TY  L+   C +   ++A++   EM      PNV T+ +
Sbjct: 215 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 274

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+D LC+ G++  A   F  M K G+ P I  +N LI+G+CK G +  A  L S MEK  
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++ TYN L++GLC V +   A  LL+++   G+L + VTYN L+DG+CKEG +  A 
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ + M   G+EP+  TF++LIDG CK G ++ A G+   MV K +  D V FTALIDG 
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454

Query: 410 SKDGNMKETLRLYKEMLEAK-----------------------------------ITPSV 434
            K G  K+   L++ M+E +                                   + PSV
Sbjct: 455 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI G  + G  + +L   LE+  +     CSPN   Y  II  LC +G++ +A  
Sbjct: 515 VTHTILIEGHCRAGETALSLKM-LERMKQAG---CSPNVYTYTIIINGLCNNGRVEEAET 570

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +   M S  + P++ TY  +++  ++A R+     +++ M+K G  P++ I   ++ G+
Sbjct: 571 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 246/474 (51%), Gaps = 8/474 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
            +  V ++L++A      + EA  V+ K+       P     + L++GL + G+ +  ++
Sbjct: 161 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQ 220

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV  G      TY VLI   C  G   KA+ + DEM  K   P V  YTILI  LC
Sbjct: 221 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 280

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ EA  +FR M + G+ P + T+NAL++GYCK   V  A +    M   N +PN+ 
Sbjct: 281 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 340

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  LM+GLC+V +   A      +   G+ P+   YN L+DG CK G L  A ++ + M
Sbjct: 341 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD FT+  LI GLC +G+LE A G+L  M K+GI  + VT+ +LIDG+CK G  
Sbjct: 401 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 460

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M E        TF+  +D   K   ++ A  +  +M+   LVP VV  T L
Sbjct: 461 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  + G    +L++ + M +A  +P+V+T + +I+GL  NGR+  A       +    
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG- 579

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
               SPNH  YA +++A    G++ +A ++ S M  +  +P++  Y+ +L G +
Sbjct: 580 ---VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 630



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 234/497 (47%), Gaps = 17/497 (3%)

Query: 80  VLPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           V+  IQ C    NG++K  G  D + E        G       Y  L+ C         A
Sbjct: 60  VVLLIQECEDSENGVVKLMGALDGMTEL-------GFRLSYPCYSTLLMCLAKLNMGFVA 112

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF--RSMRECGVVPNLYTYNALM 196
             ++  M+++G     + Y  +++ LC +N  V+A  MF  + +R  G   + +   +L+
Sbjct: 113 FLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLV 170

Query: 197 DGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
              C+  D+  A   + +M    + +PN VT+ +L+ GLC+ G L  A      M + G 
Sbjct: 171 LANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 230

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   Y  LI   C  G   +AM +  EM      P+V TY ILI  LC  G++E A G
Sbjct: 231 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + +KM K G+   ++T+N+LI+GYCKEG +  A  + S M +   +PN+ T++ L++G C
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +      A  L   +V   L+PD V +  L+DG  K+G +     ++  M  A + P  F
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI GL K GR+  A         K      S + V + A+I   C  G+      L
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKG----ISLDEVTFTALIDGHCKIGKAKDVCFL 466

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M  +       T+   L  L +  ++ +   +L  M+K G+VP  V + +++ G+  
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526

Query: 556 NGDLKSAFRCSEFLKES 572
            G+   + +  E +K++
Sbjct: 527 AGETALSLKMLERMKQA 543



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 223/473 (47%), Gaps = 32/473 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI      G IEEA  V+RK+    + P I   NAL+NG  K+G   S ++  
Sbjct: 268 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 327

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M       ++ TY  L++  C      KA  L   ++D G+ P  V Y IL+ G C E
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A ++F SM   G+ P+ +T+ AL+DG CK+  + +A      M+   +  + VTF
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK+G+ +     F +M +         +NC +D   K   L EA ++  +M K
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           + + P V T+ ILI+G C  G+   +  +L++M + G   NV TY  +I+G C  G +E+
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++   M+  GV PN  T++ L+    KAG +D A  + + MV     P+  +++AL+ 
Sbjct: 568 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627

Query: 408 G------------LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           G            LS  G++       +E     ++  VF +  + H L     I     
Sbjct: 628 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK--- 684

Query: 456 FFLEKTDKTDGGYCS-PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
                        C  P   LY  ++  LC +G+I++A +L  DM    L PD
Sbjct: 685 -------------CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 724



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 205/427 (48%), Gaps = 8/427 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           +EN +V+       M E G   +   Y+ L+    K+     A   Y  M++       +
Sbjct: 70  SENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 129

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  +++ LCK G ++AA  F   + + G   +  V   L+  +C+  +L EA  +  +M
Sbjct: 130 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 189

Query: 286 EKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
            K E   P+  TY+ILI GLC  G+LE A  L Q+M ++G   +  TY  LI   C  G 
Sbjct: 190 SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 249

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            +KA+ +  +M  K   PNV T++ LID  C+ G I+ A G++ +M+   L P ++ F A
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+G  K+G +    +L   M +    P++ T + L+ GL    R+S +   FL      
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC---RVSKSYKAFLLLRRVV 366

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           D G   P+ V Y  ++   C +GQ+  A  +F+ M S  L PD  T+T ++ GL +  R+
Sbjct: 367 DNGLL-PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
                +L  M+K GI  D V    ++ G+ + G  K      E + E+R     T  HT 
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLTTAHTF 482

Query: 585 RSFLGHL 591
             FL  L
Sbjct: 483 NCFLDAL 489



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 198/459 (43%), Gaps = 44/459 (9%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F  L+ +E     P++  ++ L+     +    +A  + R++    +LP     N L+
Sbjct: 322 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 381

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G  K+G+ +  +  +  M   GL  D  T+  LID  C  G + +A  +   M+ KGI 
Sbjct: 382 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 441

Query: 152 PTVVIYTILIHGLCN---------------EN--------------------KMVEAESM 176
              V +T LI G C                EN                    K+ EA +M
Sbjct: 442 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 501

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M + G+VP++ T+  L++G+C+  +   +L+    M      PNV T+ ++++GLC 
Sbjct: 502 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 561

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A      M+ FGV PN F Y  L+  H KAG L  A  + S M K    P+   
Sbjct: 562 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 621

Query: 297 YNILIKGLCGVGQLEGAEGLLQK--MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           Y+ L+ G        GA  L     +    + +     N L     +  D++ AL +  +
Sbjct: 622 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 681

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + + GV P    ++ L+ G CK G I  A  L  +MV   L PD  + +++I+   K   
Sbjct: 682 IKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCK 739

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
               L   K +L+ K  PS  +   +IHGL   GR+  A
Sbjct: 740 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 169/539 (31%), Positives = 274/539 (50%), Gaps = 45/539 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +STL++  +++     A  VYR++     VL  I     ++N L K G   +   F  ++
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY-RTVVNALCKNGFVQAAEMFCCKV 220

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENK 169
           +  G   D      L+   C + D+ +A  +F++M  ++   P  V Y+ILIHGLC   +
Sbjct: 221 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 280

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  + + M E G  P+  TY  L+   C +   ++A++   EM      PNV T+ +
Sbjct: 281 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 340

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+D LC+ G++  A   F  M K G+ P I  +N LI+G+CK G +  A  L S MEK  
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++ TYN L++GLC V +   A  LL+++   G+L + VTYN L+DG+CKEG +  A 
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ + M   G+EP+  TF++LIDG CK G ++ A G+   MV K +  D V FTALIDG 
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520

Query: 410 SKDGNMKETLRLYKEMLEAK-----------------------------------ITPSV 434
            K G  K+   L++ M+E +                                   + PSV
Sbjct: 521 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 580

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI G  + G  + +L   LE+  +     CSPN   Y  II  LC +G++ +A  
Sbjct: 581 VTHTILIEGHCRAGETALSLKM-LERMKQAG---CSPNVYTYTIIINGLCNNGRVEEAET 636

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +   M S  + P++ TY  +++  ++A R+     +++ M+K G  P++ I   ++ G+
Sbjct: 637 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 246/474 (51%), Gaps = 8/474 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
            +  V ++L++A      + EA  V+ K+       P     + L++GL + G+ +  ++
Sbjct: 227 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQ 286

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV  G      TY VLI   C  G   KA+ + DEM  K   P V  YTILI  LC
Sbjct: 287 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 346

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ EA  +FR M + G+ P + T+NAL++GYCK   V  A +    M   N +PN+ 
Sbjct: 347 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 406

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  LM+GLC+V +   A      +   G+ P+   YN L+DG CK G L  A ++ + M
Sbjct: 407 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD FT+  LI GLC +G+LE A G+L  M K+GI  + VT+ +LIDG+CK G  
Sbjct: 467 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 526

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M E        TF+  +D   K   ++ A  +  +M+   LVP VV  T L
Sbjct: 527 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  + G    +L++ + M +A  +P+V+T + +I+GL  NGR+  A       +    
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG- 645

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
               SPNH  YA +++A    G++ +A ++ S M  +  +P++  Y+ +L G +
Sbjct: 646 ---VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 696



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 234/497 (47%), Gaps = 17/497 (3%)

Query: 80  VLPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           V+  IQ C    NG++K  G  D + E        G       Y  L+ C         A
Sbjct: 126 VVLLIQECEDSENGVVKLMGALDGMTEL-------GFRLSYPCYSTLLMCLAKLNMGFVA 178

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF--RSMRECGVVPNLYTYNALM 196
             ++  M+++G     + Y  +++ LC +N  V+A  MF  + +R  G   + +   +L+
Sbjct: 179 FLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLV 236

Query: 197 DGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
              C+  D+  A   + +M    N +PN VT+ +L+ GLC+ G L  A      M + G 
Sbjct: 237 LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 296

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   Y  LI   C  G   +AM +  EM      P+V TY ILI  LC  G++E A G
Sbjct: 297 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 356

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + +KM K G+   ++T+N+LI+GYCKEG +  A  + S M +   +PN+ T++ L++G C
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +      A  L   +V   L+PD V +  L+DG  K+G +     ++  M  A + P  F
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI GL K GR+  A         K      S + V + A+I   C  G+      L
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKG----ISLDEVTFTALIDGHCKIGKAKDVCFL 532

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M  +       T+   L  L +  ++ +   +L  M+K G+VP  V + +++ G+  
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592

Query: 556 NGDLKSAFRCSEFLKES 572
            G+   + +  E +K++
Sbjct: 593 AGETALSLKMLERMKQA 609



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 205/427 (48%), Gaps = 8/427 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           +EN +V+       M E G   +   Y+ L+    K+     A   Y  M++       +
Sbjct: 136 SENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 195

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  +++ LCK G ++AA  F   + + G   +  V   L+  +C+  +L EA  +  +M
Sbjct: 196 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 255

Query: 286 EKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
            K E   P+  TY+ILI GLC  G+LE A  L Q+M ++G   +  TY  LI   C  G 
Sbjct: 256 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 315

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            +KA+ +  +M  K   PNV T++ LID  C+ G I+ A G++ +M+   L P ++ F A
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+G  K+G +    +L   M +    P++ T + L+ GL    R+S +   FL      
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC---RVSKSYKAFLLLRRVV 432

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           D G   P+ V Y  ++   C +GQ+  A  +F+ M S  L PD  T+T ++ GL +  R+
Sbjct: 433 DNGLL-PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
                +L  M+K GI  D V    ++ G+ + G  K      E + E+R     T  HT 
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLTTAHTF 548

Query: 585 RSFLGHL 591
             FL  L
Sbjct: 549 NCFLDAL 555



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 211/496 (42%), Gaps = 94/496 (18%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF- 106
           N   ++ LI      G IEEA  V+RK+    + P I   NAL+NG  K+G   S ++  
Sbjct: 334 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 393

Query: 107 --------------YEEMV--LC------------------GLVADVVTYGVLIDCCCGQ 132
                         Y E++  LC                  GL+ D VTY +L+D  C +
Sbjct: 394 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 453

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G +  A N+F+ M   G+EP    +T LI GLC   ++ +A  +  SM + G+  +  T+
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 513

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            AL+DG+CK+         +  M+ +       TF   +D L K  +L  A      M K
Sbjct: 514 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 573

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
           +G+ P++  +  LI+GHC+AG    ++ +   M++   SP+V+TY I+I GLC  G++E 
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 633

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME-------------------------- 346
           AE +L  M   G+  N  TY  L+  + K G ++                          
Sbjct: 634 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 693

Query: 347 -----------KALSVCSQMTEKGVE------------------PNVVTFSSLIDGQCKA 377
                      +ALS    +  + +                   P    ++ L+ G CK 
Sbjct: 694 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKE 753

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  L  +MV   L PD  + +++I+   K       L   K +L+ K  PS  + 
Sbjct: 754 GRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASY 812

Query: 438 SSLIHGLFKNGRISNA 453
             +IHGL   GR+  A
Sbjct: 813 CWVIHGLRNEGRVQEA 828



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 200/466 (42%), Gaps = 70/466 (15%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F  L+ +E     P++  ++ L+     +    +A  + R++    +LP     N L+
Sbjct: 388 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 447

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G  K+G+ +  +  +  M   GL  D  T+  LID  C  G + +A  +   M+ KGI 
Sbjct: 448 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 507

Query: 152 PTVVIYTILIHGLCN---------------EN--------------------KMVEAESM 176
              V +T LI G C                EN                    K+ EA +M
Sbjct: 508 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 567

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M + G+VP++ T+  L++G+C+  +   +L+    M      PNV T+ ++++GLC 
Sbjct: 568 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 627

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A      M+ FGV PN F Y  L+  H KAG L  A  + S M K    P+   
Sbjct: 628 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 687

Query: 297 YNILIKG------------LCGVGQLEGAEGLLQKMYKEGILANVVT---------YNSL 335
           Y+ L+ G            L   G L+ A  L  +      L+N +          YN L
Sbjct: 688 YSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNCLSNEIKKCGVPTEDLYNFL 746

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           + G CKEG + +A  +   M + G+ P+    SS+I+  CK    D  +     ++    
Sbjct: 747 VVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKF 805

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEML-------EAKITPSV 434
           VP    +  +I GL  +G ++E  +L  +++       E ++TPS+
Sbjct: 806 VPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 851


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 247/495 (49%), Gaps = 15/495 (3%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L+NGL ++G+        + MV  G   D VTYG +++  C  GD + ALN+  +M + 
Sbjct: 15  TLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDES 74

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            I+  VVIY+ ++  LC +   ++A+++F  M E G+ PN+ TYN ++DGYC     + A
Sbjct: 75  QIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDA 134

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   +M+  N+ P+VVTF  L++   K G++  A   +  M +  +FP    Y+ +IDG
Sbjct: 135 EQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDG 194

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK-----------GLCGVGQLEGAEGLL 317
            CK   L +A  +   M     SPD+ T N LI            G C VG +  A+ L 
Sbjct: 195 FCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLF 254

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           Q+M   G+  ++VT N+L+ G C+ G +EKAL +     +  ++ +  T + +I+G CK 
Sbjct: 255 QEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKG 314

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  L+  + +  +  DVV +  LI    K+GN      +Y EML   I PS  T 
Sbjct: 315 NKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTY 374

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S++ G  K  R+  A     +  D      CSP+ V ++ +I+  C  G++    +LFS
Sbjct: 375 NSMVDGFCKQNRLEEA----RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    L  D  TY  ++ G  +   +     +  +M+  G+ PD +  + M+ G     
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490

Query: 558 DLKSAFRCSEFLKES 572
           +L+      E L++S
Sbjct: 491 ELQKGLTMLEDLQKS 505



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 239/460 (51%), Gaps = 42/460 (9%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M++ G    VV +T L++GLC E ++++A ++   M E G  P+  TY  +++G CK+ D
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
              AL    +M    ++ NVV +  ++D LCK G    A N F  M + G+FPN+  YNC
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +IDG+C  G   +A  L  +M +  I PDV T++ LI      G++ GAE L ++M +  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA------- 377
           I    +TY+S+IDG+CK   +E A  +   M  KG  P+++T ++LIDG C+A       
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 378 ----GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
               GN++ A  L+ EM+   + PD+V    L+ GL ++G +++ L ++K   ++K+   
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLE------KTDKT-----------DGGYCS------ 470
             T + +I+G+ K  ++  A + F        +TD             +G +        
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 471 --------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                   P+ V Y +++   C   ++ +A ++   M S+   PD  T++T+++G  +A 
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           R+ D + L ++M + G+V D +    ++ G+ + GDL  A
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGA 460



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 221/423 (52%), Gaps = 14/423 (3%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  ++S ++    + G+  +A  ++ ++    + P +   N +++G    GK+    +
Sbjct: 77  KANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQ 136

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M+   +  DVVT+  LI+    +G V  A  L+ EM+ + I PT + Y+ +I G C
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFC 196

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDG-----------YCKVADVNRALEFYHE 214
             +++ +A+ MF  M   G  P++ T N L+DG           +C+V +VN A + + E
Sbjct: 197 KHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQE 256

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+ + + P++VT   L+ GLC+ G+L  A   F    K  +  +    N +I+G CK   
Sbjct: 257 MISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNK 316

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L + +    +  DV TYNILI      G    AE +  +M  +GI+ + VTYNS
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           ++DG+CK+  +E+A  +   M  +G  P+VVTFS+LI G CKAG +D  + L++EM  + 
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           LV D + + ALI G  K G++     +++EM+ + + P   T  S++ GL     +   L
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496

Query: 455 NFF 457
              
Sbjct: 497 TML 499



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 15/293 (5%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V T+  L+ GLC  G++  A  L+ +M +EG   + VTY ++++G CK GD   AL++ 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M E  ++ NVV +S+++D  CK GN   A  ++TEM  K + P+V+ +  +IDG    
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G   +  +L ++M+E  I P V T S+LI+   K G++S A   + E   +       P 
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN----IFPT 184

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD------ 526
            + Y+++I   C   ++  A  +F  M S    PD  T  T++ G  RAKR L       
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244

Query: 527 -----VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                   L  +MI  G+ PD V    ++ G  ENG L+ A    +  ++S++
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 276/523 (52%), Gaps = 6/523 (1%)

Query: 43  NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF-D 101
           NS      N  V+  L  A+S    + +AL+V  K++VL  +Q   A  N L+   +  D
Sbjct: 159 NSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVL-NLQVSIATYNSLLYNLRHTD 217

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
            +W+ Y E+   G+  +  T  +LID  C Q  +  A+    E   +   P+VV +  L+
Sbjct: 218 IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALM 277

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    +  A+S F  M + G++P++Y+YN L+ G C    +  ALEF ++M +H ++
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE 337

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++VT+ +L +G   +G +  A      M   G+ P++  Y  LI GHC+ GN+ E+  L
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    +   + TY +L+  LC  G+++ A  LL +M   G+  +++TY+ LI G CK
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCK 457

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A+ +  +M  K + PN    S++I G  + G I  A   +  +    +  ++++
Sbjct: 458 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 517

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +IDG +K GN+ E +R YK+++E  I+P++ T +SLI+G  K G+++ A+   L  T
Sbjct: 518 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK--LLDT 575

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K  G    P  V Y  ++   C +G +     +  +M +  ++P   TYT +++GL + 
Sbjct: 576 IKVHG--LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            R+ + + LL  M   G+ PD +    +++ + +  DL+ AF+
Sbjct: 634 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 676



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 256/517 (49%), Gaps = 9/517 (1%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P V+S   L+      G +EEAL     +E   V P I   N L NG    G     W+ 
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + M+L GL  D+VTY +LI   C  G++ ++  L ++M+ +G++ ++V YT+L+  LC 
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA  +   M   G+ P+L TY+ L+ G CK   V  A+E Y EM    + PN   
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFV 482

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              ++ GL + G +  A  +F  + K  V   I +YN +IDG+ K GN+ EA+    ++ 
Sbjct: 483 CSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 542

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  ISP + T+N LI G C  G+L  A  LL  +   G++   VTY +L++GYC+EGDM 
Sbjct: 543 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               +  +M  K ++P  +T++ ++ G CK G +  ++ L   M  + L PD + +  +I
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
               K  ++++  +L+ +ML+  + PS  T + LI+GL   G + +A    +   D++  
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS-- 720

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                  V Y  II+A C  G +  A   F  M           Y+ ++  L +   + D
Sbjct: 721 --IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITD 778

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                  M+  GI PD  I  VM+  +  +GD  S F
Sbjct: 779 AKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 815



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 213/396 (53%), Gaps = 5/396 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L+ +E+    P +  +S LI    + G +EEA+ +Y ++    + P    C+A+++GL +
Sbjct: 433 LHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG       +++ +    +  +++ Y ++ID     G++ +A+  + ++I+KGI PT+V 
Sbjct: 493 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT 552

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  LI+G C + K+ EA  +  +++  G+VP   TY  LM+GYC+  D++   +  HEM 
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME 612

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              ++P  +T+ V++ GLCK G L  +     +M   G+FP+   YN +I   CKA +L 
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A  L ++M +  + P   TYN+LI GLC  G L+ A+ LL  +  + I    V Y ++I
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             +C +GD++ AL    QM E+G E ++  +S++I+  CK   I  A   +  M+   + 
Sbjct: 733 KAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIP 792

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           PD  +   +++   + G+      ++  M++  + P
Sbjct: 793 PDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 210/448 (46%), Gaps = 40/448 (8%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            NP +  ++ LI    +MG+IEE+  +  K+    +  +I     LL+ L K G+ D   
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               EM + GL  D++TY VLI   C +G V +A+ L++EM  K I P   + + +I GL
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             +  + EA+  F S+ +  V   +  YN ++DGY K+ ++  A+  Y +++   + P +
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 550

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+ G CK G+L  A      +   G+ P    Y  L++G+C+ G++     +  E
Sbjct: 551 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS---------- 334
           ME   I P   TY +++KGLC  G+L  +  LL+ MY  G+  + +TYN+          
Sbjct: 611 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 670

Query: 335 -------------------------LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                                    LI+G C  G+++ A  +   + ++ +    V +++
Sbjct: 671 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTT 730

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I   C  G++  A+  + +MV +     +  ++A+I+ L K   + +    +  ML   
Sbjct: 731 IIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHG 790

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFF 457
           I P       +++   ++G  ++    F
Sbjct: 791 IPPDQDICLVMLNAFHRSGDPNSVFEIF 818


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 277/558 (49%), Gaps = 19/558 (3%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  F+ L  A ++    E  L + +++E   +  +I   + ++N   +  K    +  
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +++  G   D V +  L++  C +  V +AL L D M++ G +PT++    L++GLC 
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A  +   M E G  PN  TY  +++  CK      A+E   +M   N++ + V 
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++DGLCK G L  A N F  M   G   +I  YN LI G C AG   +   L  +M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K +ISP+V T+++LI      G+L  A+ LL++M + GI  N +TYNSLIDG+CKE  +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A+ +   M  KG +P+++TF+ LI+G CKA  ID  + L+ EM ++ ++ + V +  L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  + G ++   +L++EM+  ++ P + +   L+ GL  NG +  AL  F     K + 
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF----GKIEK 501

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                +  +Y  II  +C   ++  A  LF  +    ++ D   Y  M+  L R   +  
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE-------- 578
             +L   M + G  PD +   +++R +  + D  +A    E +K S   +          
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621

Query: 579 --TEGHTTRSFLGHLKPT 594
             + G   +SFL  L  T
Sbjct: 622 MLSSGELDKSFLDMLSTT 639



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 240/470 (51%), Gaps = 4/470 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP +   N L + + K  +++ V    ++M   G+   + T  ++I+C C    +  A +
Sbjct: 85  LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +++  G EP  VI+  L++GLC E ++ EA  +   M E G  P L T N L++G C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V+ A+     M+    QPN VT+G +++ +CK G+   A      M +  +  +  
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +IDG CK G+L  A +L +EME      D+ TYN LI G C  G+ +    LL+ M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  I  NVVT++ LID + KEG + +A  +  +M ++G+ PN +T++SLIDG CK   +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ +   M+ K   PD++ F  LI+G  K   + + L L++EM    +  +  T ++L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G  ++G++  A   F E   +       P+ V Y  ++  LC +G++ KA ++F  + 
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRR----VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
              +  D   Y  ++ G+  A ++ D   L   +   G+  DA    +M+
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 207/420 (49%), Gaps = 4/420 (0%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D   + + +M+    +  V+ +  L             L L  +M  KGI  ++   +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I+I+  C   K+  A S    + + G  P+   +N L++G C    V+ ALE    M+  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             +P ++T   L++GLC  G++  A      M + G  PN   Y  +++  CK+G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M L  +ME+  I  D   Y+I+I GLC  G L+ A  L  +M  +G  A+++TYN+LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C  G  +    +   M ++ + PNVVTFS LID   K G +  A  L  EM+ + + P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + + +LIDG  K+  ++E +++   M+     P + T + LI+G  K  RI + L  F 
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E + +        N V Y  ++Q  C  G++  A KLF +M S  +RPD  +Y  +L GL
Sbjct: 428 EMSLRG----VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +MI     PTV+ +  L   +    +     ++ + M   G+  ++YT + +++
Sbjct: 72  AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+   ++ A     +++    +P+ V F  L++GLC    +  A      M + G  P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +   N L++G C  G + +A+ L   M +    P+  TY  ++  +C  GQ   A  LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I  + V Y+ +IDG CK+G ++ A ++ ++M  KG + +++T+++LI G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  D    L  +M+ + + P+VV F+ LID   K+G ++E  +L KEM++  I P+  T 
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G  K  R+  A+       D      C P+ + +  +I   C   +I    +LF 
Sbjct: 372 NSLIDGFCKENRLEEAIQM----VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    +  +  TY T+++G  ++ ++     L  +M+   + PD V  ++++ G  +NG
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 558 DLKSAF 563
           +L+ A 
Sbjct: 488 ELEKAL 493



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 195/398 (48%), Gaps = 5/398 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   +  ++    + G    A+ + RK+E     L A++  + +++GL K G  D+ +  
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNL 285

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM + G  AD++TY  LI   C  G       L  +MI + I P VV +++LI     
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EA+ + + M + G+ PN  TYN+L+DG+CK   +  A++    M+     P+++T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L++G CK   +      F  M+  GV  N   YN L+ G C++G L  A  L  EM 
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+ +Y IL+ GLC  G+LE A  +  K+ K  +  ++  Y  +I G C    ++
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   +  KGV+ +   ++ +I   C+  ++  A  L+ +M  +   PD + +  LI
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                D +      L +EM  +     V TV  +I+ L
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 4/406 (0%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K  +A  +FR M +   +P +  +N L     K       L    +M    +  ++ T  
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++  C+  +L  A +    + K G  P+  ++N L++G C    + EA+ L   M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P + T N L+ GLC  G++  A  L+ +M + G   N VTY  +++  CK G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + +  +M E+ ++ + V +S +IDG CK G++D A  L+ EM IK    D++ +  LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
               G   +  +L ++M++ KI+P+V T S LI    K G++  A     E   +     
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG---- 363

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +PN + Y ++I   C + ++ +A ++   M S    PD  T+  ++ G  +A R+ D +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            L  +M   G++ + V    +V+G+ ++G L+ A +  + +   R+
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 264/495 (53%), Gaps = 4/495 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K   LP+I   N LL+ + K  KFD V    E+M   G+  ++ TY +LI+C C +  + 
Sbjct: 3   KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL L  +M+  G EP++V  + L++G C+  ++ +A ++   M E G  P+  T+  L+
Sbjct: 63  LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QPN+VT+GV+++GLCK G++  A N    M    + 
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ ++N +ID  CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M ++ I  N+VT+N+LID + KEG   +A  +   M ++ ++P++ T++SLI+G C 
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  MV K   PD+  +  LI G  K   +++   L++EM    +     T
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GLF +G   NA   F +    +DG    P+ + Y+ ++  LC +G++ KA ++F
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMV--SDG--VPPDIMTYSILLDGLCNNGKLEKALEVF 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M+   ++ D   YTTM+ G+ +A ++ D   L   +   G+ P+ V    M+ G    
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478

Query: 557 GDLKSAFRCSEFLKE 571
             L+ A+   + +KE
Sbjct: 479 RLLQEAYALLKKMKE 493



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 218/426 (51%), Gaps = 10/426 (2%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P++  +  L+  +    K     S+   M+  G+  NLYTYN L++ +C+ + ++ AL  
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG--- 268
             +M+    +P++VT   L++G C    +  A      M + G  P+   +  LI G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           H KA    EA++L   M +    P++ TY +++ GLC  G ++ A  LL KM    I A+
Sbjct: 128 HNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV +N++ID  CK   ++ AL++  +M  KG+ PNVVT+SSLI   C  G    A  L +
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M+ K + P++V F ALID   K+G   E  +L+ +M++  I P +FT +SLI+G   + 
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           R+  A   F     K     C P+   Y  +I+  C   ++   ++LF +M    L  D 
Sbjct: 305 RLDKAKQMFEFMVSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TYTT+++GL       +   +   M+  G+ PD +   +++ G   NG L+ A    ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420

Query: 569 LKESRI 574
           +++S I
Sbjct: 421 MQKSEI 426



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 204/398 (51%), Gaps = 3/398 (0%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+TLI          EA+  V R ++    P +     ++NGL K+G  D  +    +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + ADVV +  +ID  C    V  ALNLF EM  KGI P VV Y+ LI  LC+  + 
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   M E  + PNL T+NAL+D + K      A + + +M+  ++ P++ T+  L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G C    L  A   F  M     FP++  YN LI G CK+  + +   L  EM    +
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D  TY  LI+GL   G  + A+ + ++M  +G+  +++TY+ L+DG C  G +EKAL 
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M +  ++ ++  ++++I+G CKAG +D    L+  + +K + P+VV +  +I GL 
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
               ++E   L K+M E    P   T ++LI    ++G
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 198/408 (48%), Gaps = 6/408 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEF 106
           N   +  ++    + G I+ A  +  K+E    I+A     N +++ L K    D     
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNL 207

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++EM   G+  +VVTY  LI C C  G    A  L  +MI+K I P +V +  LI     
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K VEAE +   M +  + P+++TYN+L++G+C    +++A + +  M+  +  P++ T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G CK   +      F  M+  G+  +   Y  LI G    G+   A  +  +M 
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+ TY+IL+ GLC  G+LE A  +   M K  I  ++  Y ++I+G CK G ++
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               +   ++ KGV+PNVVT++++I G C    +  A  L  +M     +PD   +  LI
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
               +DG+   +  L +EM   +      T+  L+  +  +GR+  + 
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKSF 554



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 4/320 (1%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M K    P+IF +N L+    K       +SL  +M++  IS +++TYNILI   C   Q
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A  LL KM K G   ++VT +SL++GYC    +  A+++  QM E G  P+ +TF++
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G         A+ L   MV +   P++V +  +++GL K G++     L  +M  AK
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I   V   +++I  L K   + +ALN F E   K       PN V Y+++I  LC  G+ 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG----IRPNVVTYSSLISCLCSYGRW 236

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             AS+L SDM    + P+  T+  ++   ++  + ++   L  DMIK  I PD      +
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 550 VRGYQENGDLKSAFRCSEFL 569
           + G+  +  L  A +  EF+
Sbjct: 297 INGFCMHDRLDKAKQMFEFM 316


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 257/486 (52%), Gaps = 4/486 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V    E+M   G+  +  TY +LI+C C +  + 
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLP 133

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G EP +V  + L++G C+  ++ EA ++   M   G  PN  T+N L+
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G       + A+     M+    QP++VT+GV+++GLCK G+   A      M +  + 
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P + +Y  +IDG CK  ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  L
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M +  I  +V T+++LID + KEG + +A  +  +M ++ ++P++VT+SSLI+G C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +D A  ++  MV K   PDVV ++ LI G  K   + E + L++EM +  +  +  T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GLF+ G    A   F E    +DG    PN + Y  ++  LC +G++ KA  +F
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMV--SDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             ++   + P   TY  M+ G+ +A ++ D   L  ++   G+ PD V    M+ G+   
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549

Query: 557 GDLKSA 562
           G  + A
Sbjct: 550 GSKEEA 555



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 210/401 (52%), Gaps = 3/401 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI          EA+ +  ++      P +     ++NGL K+G  D  +   
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M    L   V+ Y  +ID  C    +  ALNLF EM  KGI P VV Y+ LI  LCN 
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  +A  +   M E  + P+++T++AL+D + K   +  A + Y EM+  ++ P++VT+
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C    L  A   F  M     FP++  Y+ LI G CKA  + E M L  EM +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  +  TY  LI+GL   G  + A+ + ++M  +G+  N++TYN+L+DG CK G +EK
Sbjct: 425 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ V   +    +EP + T++ +I+G CKAG ++    L+  + +K + PDVV +  +I 
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G  + G+ +E   L+KEM E    P+    ++LI    ++G
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 229/440 (52%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EM+     P+++ ++ L+  +   NK     S+   M+  G+  N YTY+ L++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +PN+VT   L++G C    +  A      M   G  P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           N   +N LI G   H KA    EA++L   M      PD+ TY +++ GLC  G  + A 
Sbjct: 185 NTVTFNTLIHGLFLHNKAS---EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM +  +   V+ Y ++IDG CK   M+ AL++  +M  KG+ PNVVT+SSLI   
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + PDV  F+ALID   K+G + E  +LY EM++  I PS+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T SSLI+G   + R+  A   F     K    +C P+ V Y+ +I+  C   ++ +  +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVSYSTLIKGFCKAKRVDEGME 417

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TYTT+++GL +A        +  +M+  G+ P+ +    ++ G  
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG L+ A    E+L+ S++
Sbjct: 478 KNGKLEKAMVVFEYLQRSKM 497



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 231/472 (48%), Gaps = 5/472 (1%)

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL  + K D     + EMV       ++ +  L+            ++L ++M + G+ 
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
                Y+ILI+  C  +++  A ++   M + G  PN+ T ++L++GYC    ++ A+  
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M     QPN VTF  L+ GL    +   A      M   G  P++  Y  +++G CK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G+   A  L ++ME+ ++ P V  Y  +I GLC    ++ A  L ++M  +GI  NVVT
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLI   C  G    A  + S M E+ + P+V TFS+LID   K G +  A  LY EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +S+ P +V +++LI+G      + E  ++++ M+     P V + S+LI G  K  R+ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             +  F E + +   G    N V Y  +IQ L   G    A ++F +M SD + P+  TY
Sbjct: 414 EGMELFREMSQRGLVG----NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            T+L GL +  ++   M++   + +  + P      +M+ G  + G ++  +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 175/549 (31%), Positives = 272/549 (49%), Gaps = 37/549 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKF------D 101
           NPS+F++L+  +   G    A  ++ ++      P   A N  +  +  + +       D
Sbjct: 340 NPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLD 399

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
            V + YEEM+    V + V       C CG G   KA  +  EM+ KG  P    YT +I
Sbjct: 400 LVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVI 459

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC   K+ ++  +F+ M+  GV P++YTY  L+D +CK   + +A  ++ EM      
Sbjct: 460 TFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCS 519

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVVT+  L+    K  +L  A + F  M     +PN   Y+ LIDG CKAG + +A   
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA--- 576

Query: 282 CSEMEK-------------FE------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           C   EK             FE      I+P+V TY  LI GLC   ++  A  LL  M  
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   N + Y++LIDG+CK G ++ A  V  +MT+ G  P+V T++SLID   K G +D 
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           AM + +EM+  S  P+VV +TA+IDGLSK G +++ L L   M E   +P+V T ++LI 
Sbjct: 697 AMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALID 756

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K G+   +L  F +   K     C+PN+V Y  +I   C  G + +A  L  +M+  
Sbjct: 757 GLGKTGKADASLKLFKQMNSKG----CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHT 812

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +       Y   ++G   +K+ +  + LL +M     VP A +  +++  + + G L++A
Sbjct: 813 HWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870

Query: 563 FRCSEFLKE 571
               + L E
Sbjct: 871 LELHKELVE 879



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/534 (30%), Positives = 254/534 (47%), Gaps = 56/534 (10%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N + FS  +     +G  E+A  + +++     +P       ++  L +  K +  + 
Sbjct: 417 KVNTANFSRCLCG---VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM   G+  DV TY +LID  C  G + +A + FDEM   G  P VV YT L+H   
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN------ 219
              ++++A  +F  M +    PN  TY+AL+DG CK  ++ +A E Y +++  +      
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 220 ----------LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                     + PNVVT+G L+DGLCK  ++  A      M   G  PN  VY+ LIDG 
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A  +   M K    P V TY  LI  +   G+L+ A  +L +M  +    NV
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY ++IDG  K G++EKAL++ S M EKG  PNVVT+++LIDG  K G  DA++ L+ +
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ 773

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKE-------------------------------- 417
           M  K   P+ V +  LI+     G + E                                
Sbjct: 774 MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFI 833

Query: 418 -TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
            +L L +EM   +  P       LI    K GR+  AL    E  + +     +    +Y
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTG-MY 892

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           A++IQALC   Q+ +A  L+++M    + PD   + ++++GL+   +  + + L
Sbjct: 893 ASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 237/568 (41%), Gaps = 71/568 (12%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A  E+G +++  + YR     P+    NAL+  L   G+ +  +   +EM   G   D  
Sbjct: 188 ALEELGRLKD--FGYR-----PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T G      C  G    ALN+ ++   +      V+ T +I GL   +   EA S    M
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R    +PN+ TY  L+ G+ K           + M+     PN   F  L+ G C  G+ 
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDG-------------------------------- 268
             A   F  M   G  P    YN  I                                  
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK 417

Query: 269 ---------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
                     C  G   +A  +  EM +    PD  TY  +I  LC   ++E +  L Q+
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  +V TY  LID +CK G +E+A S   +M   G  PNVVT+++L+    K+  
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML------------- 426
           +  A  ++  MV  +  P+ V ++ALIDGL K G +++   +Y++++             
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 427 ---EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
                 I P+V T  +LI GL K  ++S+A     E  D      C PN ++Y A+I   
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDA----HELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+I  A ++F  M      P   TYT+++  + +  R+   M +L++M+     P+ 
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKE 571
           V    M+ G  + G+++ A      ++E
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEE 741



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 220/506 (43%), Gaps = 60/506 (11%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           VL+  CC  G   +AL     + D G  P+ V Y  L+  L +  ++     + + M   
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233

Query: 184 GVVPNLYTYNALMDGYCKV---ADV-----------------------------NRALEF 211
           G   +  T        CKV   AD                              N A+ F
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            H M  ++  PNVVT+  L+ G  K  +          M   G  PN  ++N L+ G+C 
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE--GLLQKMYKEGILA-- 327
           AG+   A  L + M      P    YNI I  +CG  +L  AE   L++K+Y+E + A  
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413

Query: 328 --NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V   +     C  G  EKA  +  +M  KG  P+  T++ +I   C+A  ++ +  
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    + PDV  +T LID   K G +++    + EM     +P+V T ++L+H   
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS-------D 498
           K+ ++  A + F    D      C PN V Y+A+I  LC  G+I KA +++        +
Sbjct: 534 KSKQLIQAHDIFHRMVDAA----CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGN 589

Query: 499 MRSD---------NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           + SD          + P+  TY  ++ GL +A+++ D   LL  M+  G  P+ ++   +
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDAL 649

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIG 575
           + G+ + G + +A     FL+ ++ G
Sbjct: 650 IDGFCKIGKIDNAQEV--FLRMTKCG 673



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 150/316 (47%), Gaps = 8/316 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+  LI  F ++G I+ A  V+ ++     LP++    +L++ + K G+ D   +  
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+      +VVTY  +ID     G++ KALNL   M +KG  P VV YT LI GL   
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKT 761

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K   +  +F+ M   G  PN  TY  L++  C    ++ A     EM H +   ++  +
Sbjct: 762 GKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGY 821

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              + G  K  +  A+      M      P   VY  LID   KAG L  A+ L  E+ +
Sbjct: 822 HCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879

Query: 288 FEISPDVFT---YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
              S ++ +   Y  LI+ LC   Q+E A  L  +M ++GI+ +++ + SL+ G  +   
Sbjct: 880 VSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK 939

Query: 345 MEKALSVCSQMTEKGV 360
            ++AL +C     +GV
Sbjct: 940 WDEALQLCYGRCHEGV 955


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/539 (31%), Positives = 274/539 (50%), Gaps = 45/539 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +STL++  +++     A  VYR++     VL  I     ++N L K G   +   F  ++
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY-RTVVNALCKNGFVQAAEMFCCKV 197

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENK 169
           +  G   D      L+   C + D+ +A  +F++M  ++   P  V Y+ILIHGLC   +
Sbjct: 198 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 257

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  + + M E G  P+  TY  L+   C +   ++A++   EM      PNV T+ +
Sbjct: 258 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 317

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+D LC+ G++  A   F  M K G+ P I  +N LI+G+CK G +  A  L S MEK  
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++ TYN L++GLC V +   A  LL+++   G+L + VTYN L+DG+CKEG +  A 
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ + M   G+EP+  TF++LIDG CK G ++ A G+   MV K +  D V FTALIDG 
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497

Query: 410 SKDGNMKETLRLYKEMLEAK-----------------------------------ITPSV 434
            K G  K+   L++ M+E +                                   + PSV
Sbjct: 498 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI G  + G  + +L   LE+  +     CSPN   Y  II  LC +G++ +A  
Sbjct: 558 VTHTILIEGHCRAGETALSLKM-LERMKQAG---CSPNVYTYTIIINGLCNNGRVEEAET 613

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +   M S  + P++ TY  +++  ++A R+     +++ M+K G  P++ I   ++ G+
Sbjct: 614 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 246/474 (51%), Gaps = 8/474 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
            +  V ++L++A      + EA  V+ K+       P     + L++GL + G+ +  ++
Sbjct: 204 LDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQ 263

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV  G      TY VLI   C  G   KA+ + DEM  K   P V  YTILI  LC
Sbjct: 264 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 323

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ EA  +FR M + G+ P + T+NAL++GYCK   V  A +    M   N +PN+ 
Sbjct: 324 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 383

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  LM+GLC+V +   A      +   G+ P+   YN L+DG CK G L  A ++ + M
Sbjct: 384 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD FT+  LI GLC +G+LE A G+L  M K+GI  + VT+ +LIDG+CK G  
Sbjct: 444 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 503

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M E        TF+  +D   K   ++ A  +  +M+   LVP VV  T L
Sbjct: 504 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  + G    +L++ + M +A  +P+V+T + +I+GL  NGR+  A       +    
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG- 622

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
               SPNH  YA +++A    G++ +A ++ S M  +  +P++  Y+ +L G +
Sbjct: 623 ---VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 673



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 234/497 (47%), Gaps = 17/497 (3%)

Query: 80  VLPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           V+  IQ C    NG++K  G  D + E        G       Y  L+ C         A
Sbjct: 103 VVLLIQECEDSENGVVKLMGALDGMTEL-------GFRLSYPCYSTLLMCLAKLNMGFVA 155

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF--RSMRECGVVPNLYTYNALM 196
             ++  M+++G     + Y  +++ LC +N  V+A  MF  + +R  G   + +   +L+
Sbjct: 156 FLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLV 213

Query: 197 DGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
              C+  D+  A   + +M    N +PN VT+ +L+ GLC+ G L  A      M + G 
Sbjct: 214 LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 273

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   Y  LI   C  G   +AM +  EM      P+V TY ILI  LC  G++E A G
Sbjct: 274 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 333

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + +KM K G+   ++T+N+LI+GYCKEG +  A  + S M +   +PN+ T++ L++G C
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +      A  L   +V   L+PD V +  L+DG  K+G +     ++  M  A + P  F
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI GL K GR+  A         K      S + V + A+I   C  G+      L
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKG----ISLDEVTFTALIDGHCKIGKAKDVCFL 509

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M  +       T+   L  L +  ++ +   +L  M+K G+VP  V + +++ G+  
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569

Query: 556 NGDLKSAFRCSEFLKES 572
            G+   + +  E +K++
Sbjct: 570 AGETALSLKMLERMKQA 586



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 205/427 (48%), Gaps = 8/427 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           +EN +V+       M E G   +   Y+ L+    K+     A   Y  M++       +
Sbjct: 113 SENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 172

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  +++ LCK G ++AA  F   + + G   +  V   L+  +C+  +L EA  +  +M
Sbjct: 173 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 232

Query: 286 EKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
            K E   P+  TY+ILI GLC  G+LE A  L Q+M ++G   +  TY  LI   C  G 
Sbjct: 233 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 292

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            +KA+ +  +M  K   PNV T++ LID  C+ G I+ A G++ +M+   L P ++ F A
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+G  K+G +    +L   M +    P++ T + L+ GL    R+S +   FL      
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC---RVSKSYKAFLLLRRVV 409

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           D G   P+ V Y  ++   C +GQ+  A  +F+ M S  L PD  T+T ++ GL +  R+
Sbjct: 410 DNGLL-PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
                +L  M+K GI  D V    ++ G+ + G  K      E + E+R     T  HT 
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLTTAHTF 525

Query: 585 RSFLGHL 591
             FL  L
Sbjct: 526 NCFLDAL 532



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 198/459 (43%), Gaps = 44/459 (9%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F  L+ +E     P++  ++ L+     +    +A  + R++    +LP     N L+
Sbjct: 365 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 424

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G  K+G+ +  +  +  M   GL  D  T+  LID  C  G + +A  +   M+ KGI 
Sbjct: 425 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 484

Query: 152 PTVVIYTILIHGLCN---------------EN--------------------KMVEAESM 176
              V +T LI G C                EN                    K+ EA +M
Sbjct: 485 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 544

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M + G+VP++ T+  L++G+C+  +   +L+    M      PNV T+ ++++GLC 
Sbjct: 545 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 604

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A      M+ FGV PN F Y  L+  H KAG L  A  + S M K    P+   
Sbjct: 605 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 664

Query: 297 YNILIKGLCGVGQLEGAEGLLQK--MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           Y+ L+ G        GA  L     +    + +     N L     +  D++ AL +  +
Sbjct: 665 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 724

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + + GV P    ++ L+ G CK G I  A  L  +MV   L PD  + +++I+   K   
Sbjct: 725 IKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCK 782

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
               L   K +L+ K  PS  +   +IHGL   GR+  A
Sbjct: 783 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 266/525 (50%), Gaps = 9/525 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  FS L  A ++    +  L + +++E   +   +   + ++N   +  K    +  
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +++  G   + +T+  LI+  C +G V +AL L D M++ G +P ++    L++GLC 
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  EA  +   M E G  PN  TY  +++  CK      A+E   +M   N++ + V 
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++DGLCK G L  A N F  M   G+  NI  YN LI G C AG   +   L  +M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K +I+P+V T+++LI      G+L  AE L ++M   GI  + +TY SLIDG+CKE  ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  +   M  KG +PN+ TF+ LI+G CKA  ID  + L+ +M ++ +V D V +  LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  + G +     L++EM+  K+ P++ T   L+ GL  NG    AL  F EK +K+  
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSK- 503

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                +  +Y  II  +C   ++  A  LF  +    ++P   TY  M+ GL +   + +
Sbjct: 504 --MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             +L   M + G  PD     +++R +  +GD   + +  E LK 
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 254/497 (51%), Gaps = 7/497 (1%)

Query: 69  EEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           ++A+ ++R +     LP +   + L + + K  ++D V    ++M L G+  ++ T  ++
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+C C    +  A +   ++I  G EP  + ++ LI+GLC E ++ EA  +   M E G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P+L T N L++G C       A+    +M+ +  QPN VT+G +++ +CK G+   A  
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M +  +  +   Y+ +IDG CK G+L  A +L +EME   I+ ++ TYNILI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+ +    LL+ M K  I  NVVT++ LID + KEG + +A  +  +M  +G+ P+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++SLIDG CK  ++D A  +   MV K   P++  F  LI+G  K   + + L L+++M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
               +     T ++LI G  + G+++ A   F E   +       PN V Y  ++  LC 
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK----VPPNIVTYKILLDGLCD 485

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+  KA ++F  +    +  D   Y  ++ G+  A ++ D   L   +   G+ P    
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545

Query: 546 NQVMVRGYQENGDLKSA 562
             +M+ G  + G L  A
Sbjct: 546 YNIMIGGLCKKGPLSEA 562



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 220/437 (50%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +MI     PTV+ ++ L   +    +     ++ + M   G+  NLYT + +++
Sbjct: 72  AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+   +  A     +++    +PN +TF  L++GLC  G +  A      M + G  P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++   N L++G C +G   EAM L  +M ++   P+  TY  ++  +C  GQ   A  LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I  + V Y+ +IDG CK G ++ A ++ ++M  KG+  N++T++ LI G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  D    L  +M+ + + P+VV F+ LID   K+G ++E   L+KEM+   I P   T 
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G  K     N L+   +  D      C PN   +  +I   C   +I    +LF 
Sbjct: 372 TSLIDGFCK----ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M    +  D  TY T+++G     ++     L  +M+   + P+ V  ++++ G  +NG
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 558 DLKSAFRCSEFLKESRI 574
           + + A    E +++S++
Sbjct: 488 ESEKALEIFEKIEKSKM 504



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 208/420 (49%), Gaps = 4/420 (0%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D   + + +M+    +  V+ +  L             L L  +M  KGI   +   +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I+I+  C   K+  A S    + + G  PN  T++ L++G C    V+ ALE    M+  
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             +P+++T   L++GLC  G+   A      M ++G  PN   Y  +++  CK+G    A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M L  +ME+  I  D   Y+I+I GLC  G L+ A  L  +M  +GI  N++TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C  G  +    +   M ++ + PNVVTFS LID   K G +  A  L+ EM+ + + PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + +T+LIDG  K+ ++ +  ++   M+     P++ T + LI+G  K  RI + L  F 
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           + + +        + V Y  +IQ  C  G++  A +LF +M S  + P+  TY  +L GL
Sbjct: 428 KMSLRG----VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 6/408 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   +  ++    + G    A+ + RK+E     L A++  + +++GL K G  D+ +  
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNL 285

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM + G+  +++TY +LI   C  G       L  +MI + I P VV +++LI     
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EAE + + M   G+ P+  TY +L+DG+CK   +++A +    M+     PN+ T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L++G CK   +      F  M+  GV  +   YN LI G C+ G L  A  L  EM 
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             ++ P++ TY IL+ GLC  G+ E A  + +K+ K  +  ++  YN +I G C    ++
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   +  KGV+P V T++ +I G CK G +  A  L+ +M      PD   +  LI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
                DG+  ++++L +E+     +    T+  +I  +  +GR+  + 
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/366 (37%), Positives = 210/366 (57%), Gaps = 3/366 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++T+I  +   G +E A   L + +   V P      +L++G+ K GK +    
Sbjct: 268 KPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASG 327

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             E+M   GL+   VTY  LID  C +GD++KA    DEM+ + I PTV  Y +LIH L 
Sbjct: 328 ILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALF 387

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E KM EA+ M + M + G+VP+  TYN L++GYC+  +  +A   + EM+   +QP +V
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV 447

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+  L K   ++AA + F  + + G  P++ ++N LIDGHC  GNL  A +L  EM
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +K  I PD  TYN L++G C  G++E A  LL++M + GI  + ++YN+LI GY K GD+
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A ++  +M   G  P ++T+++LI G CK    D A  L  EMV K + PD   + +L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 406 IDGLSK 411
           I+G+ K
Sbjct: 628 IEGIGK 633



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 138/409 (33%), Positives = 223/409 (54%), Gaps = 4/409 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +LI   C   +  +A   F  M+E GVVP + T+NA++  + K+         Y E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++  V TF ++++ LCK G+L+ A +F   M   GV PN+  YN +I G+C  G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A  +   M+   + PD +TY  LI G+C  G+LE A G+L+KM + G+L   VTYN+
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDGYC +GD+ KA     +M  + + P V T++ LI      G +D A G+  +M    
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +VPD + +  LI+G  + GN K+   L+ EM+   I P++ T +SLI+ L K  R+  A 
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F    +K      SP+ +++ A+I   C +G + +A  L  +M   N+ PD  TY T+
Sbjct: 467 DLF----EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++G  R  ++ +   LL +M + GI PD +    ++ GY + GD+  AF
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 243/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI A  E+   ++A   +  ++   V+P I+  NA+L+  +K  + ++VW  Y EM
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + V T+ ++I+  C +G + KA +    M + G++P VV Y  +IHG C+  ++
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M+  GV P+ YTY +L+ G CK   +  A     +M    L P  VT+  L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G+L  A  +   M +  + P +  YN LI      G + EA  +  +M    I
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYNILI G C  G  + A  L  +M  +GI   +VTY SLI    K   M+ A  
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADD 467

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++  +G  P+++ F++LIDG C  GN+D A  L  EM  +++VPD V +  L+ G  
Sbjct: 468 LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRC 527

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E   L KEM    I P   + ++LI G  K G I++A   F  + +    G+ +
Sbjct: 528 REGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDA---FTIRDEMLSIGF-N 583

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+IQ LC + Q   A +L  +M S  + PD+ TY +++ G+
Sbjct: 584 PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/481 (31%), Positives = 241/481 (50%), Gaps = 11/481 (2%)

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           F E+    + L     I     I+AC  L  G       D  +E ++ M   G+V  + T
Sbjct: 151 FHELAITRDRLGTKSSIVFDMLIRACCELKRG-------DDAFECFDMMKEKGVVPKIET 203

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +  ++              L+ EM    I+ TV  + I+I+ LC E K+ +A+    SM 
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             GV PN+ TYN ++ GYC    V  A      M +  ++P+  T+G L+ G+CK G+L 
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      M + G+ P    YN LIDG+C  G+L +A     EM +  I P V TYN+LI
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             L   G+++ A+G+++ M   GI+ + +TYN LI+GYC+ G+ +KA ++  +M  KG++
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P +VT++SLI    K   + AA  L+ +++ +   PD+++F ALIDG   +GN+     L
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL 503

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            KEM +  I P   T ++L+ G  + G++  A     E   +       P+H+ Y  +I 
Sbjct: 504 LKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG----IRPDHISYNTLIS 559

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                G I  A  +  +M S    P   TY  +++GL + ++      LL +M+  GI P
Sbjct: 560 GYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITP 619

Query: 542 D 542
           D
Sbjct: 620 D 620



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 232/440 (52%), Gaps = 9/440 (2%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           +PK     F+ ++  F ++   E    +Y    ++++   +   N ++N L K+GK    
Sbjct: 198 VPKI--ETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKA 255

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            +F   M   G+  +VVTY  +I   C +G V  A  + D M ++G+EP    Y  LI G
Sbjct: 256 KDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISG 315

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           +C   K+ EA  +   M+E G++P   TYN L+DGYC   D+ +A  +  EM+   + P 
Sbjct: 316 MCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPT 375

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+ +L+  L   G++  A      M   G+ P+   YN LI+G+C+ GN  +A +L  
Sbjct: 376 VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHD 435

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    I P + TY  LI  L    +++ A+ L +K+ +EG   +++ +N+LIDG+C  G
Sbjct: 436 EMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++++A ++  +M ++ + P+ VT+++L+ G+C+ G ++ A  L  EM  + + PD + + 
Sbjct: 496 NLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYN 555

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI G SK G++ +   +  EML     P++ T ++LI GL KN +   A     E   K
Sbjct: 556 TLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSK 615

Query: 464 TDGGYCSPNHVLYAAIIQAL 483
                 +P+   Y ++I+ +
Sbjct: 616 G----ITPDDSTYFSLIEGI 631



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 230/456 (50%), Gaps = 15/456 (3%)

Query: 120 VTYGVLIDCCC--GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           + + +LI  CC   +GD   A   FD M +KG+ P +  +  ++      N+      ++
Sbjct: 167 IVFDMLIRACCELKRGD--DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M    +   +YT+N +++  CK   + +A +F   M +  ++PNVVT+  ++ G C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A      M   GV P+ + Y  LI G CK G L EA  +  +M++  + P   TY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G C  G L  A G   +M +  IL  V TYN LI     EG M++A  +   M +
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G+ P+ +T++ LI+G C+ GN   A  L+ EM+ K + P +V +T+LI  LSK   MK 
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L+++++    +P +   ++LI G   NG +  A    L++ DK +     P+ V Y 
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA-LLKEMDKRN---IVPDEVTYN 520

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++Q  C +G++ +A +L  +M+   +RPD+ +Y T++ G  +   + D   +  +M+ +
Sbjct: 521 TLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSI 580

Query: 538 GIVPDAVINQVMVRGYQEN--GDLKSAFRCSEFLKE 571
           G  P  +    +++G  +N  GDL       E LKE
Sbjct: 581 GFNPTLLTYNALIQGLCKNQQGDL-----AEELLKE 611



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 168/299 (56%), Gaps = 5/299 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++TLI  +   G + +A + YR    +  +LP +   N L++ L  +GK D      ++
Sbjct: 343 TYNTLIDGYCNKGDLVKA-FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+V D +TY +LI+  C  G+  KA NL DEMI KGI+PT+V YT LI+ L   N+
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M  A+ +F  +   G  P+L  +NAL+DG+C   +++RA     EM   N+ P+ VT+  
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           LM G C+ G++  A      M + G+ P+   YN LI G+ K G++ +A ++  EM    
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            +P + TYN LI+GLC   Q + AE LL++M  +GI  +  TY SLI+G  K  D  +A
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 3/195 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI   S+   ++ A  ++ KI      P +   NAL++G    G  D  +   +EM
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +V D VTY  L+   C +G V +A  L  EM  +GI P  + Y  LI G      +
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A ++   M   G  P L TYNAL+ G CK    + A E   EM+   + P+  T+  L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 231 MDGLCKVGELRAAGN 245
           ++G+ KV +   A +
Sbjct: 628 IEGIGKVDDSSEASD 642


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 270/517 (52%), Gaps = 9/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  + + G ++ A+ +    +K +V P+I   N+LL+GL K  + +      
Sbjct: 135 NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCML 194

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGD-VMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E+   G V D  TY ++ D      D    AL+L+ E I KG++      +IL++GLC 
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ +AE + +S+ E G+VP    YN +++GYC++ D++RA+    +M    L+PN + 
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  ++D  C++  +  A  +   M   G+ P++  YN LIDG+ +         +  EME
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P+V +Y  LI  LC  G++  AE +L+ M   G+L N   YN LIDG C  G + 
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL    +M++ G+   +VT++SLI G CK G +  A  ++  +      PDV+ + +LI
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G S  GN ++ L LY+ M +  + P++ T   LI G  K G I      F E       
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMN-- 551

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              SP+ V+Y A+I      G + KA  L  +M    +RPDN TY +++ G L+  ++ +
Sbjct: 552 --LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSE 609

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              L+ DM   G++P+A    ++++G+ +  D   A+
Sbjct: 610 TKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAY 646



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 302/581 (51%), Gaps = 17/581 (2%)

Query: 18  IKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVY 75
           ++ + E+L++S+K  +V   +F  +  L    F P   V+   ++A  ++G ++ A+ ++
Sbjct: 34  VRMIVESLVESKKFDNV-LDLFKEMVGL---GFRPDKLVYGRAMLAAVKLGDLKLAMELF 89

Query: 76  ---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
              ++ +V+P +   N L+ GL K+ +     + + EM +  LV + VT+  LID  C  
Sbjct: 90  ETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKA 149

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G+V  A+ L + M  + +EP+++ +  L+ GLC   ++ EA  M   ++  G VP+ +TY
Sbjct: 150 GEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTY 209

Query: 193 NALMDGYCKVAD-VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           + + DG  K  D    AL+ Y E +   ++ +  T  +L++GLCK G++  A      + 
Sbjct: 210 SIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLV 269

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G+ P   +YN +++G+C+ G++  A+    +ME   + P+   +N +I   C +  ++
Sbjct: 270 EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMID 329

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            AE  ++KM  +GI  +V TYN LIDGY +     +   +  +M E G +PNV+++ SLI
Sbjct: 330 KAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLI 389

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +  CK G I  A  +  +MV + ++P+  ++  LIDG    G ++E LR + EM +  I 
Sbjct: 390 NCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIG 449

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            ++ T +SLI GL K G++  A   F   T     G+C P+ + Y ++I      G   K
Sbjct: 450 ATIVTYNSLIKGLCKMGKLKEAEEMFFLITST---GHC-PDVITYNSLISGYSNAGNSQK 505

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             +L+  M+   L+P   T+  ++ G  +    L    L  +M++M + PD V+   M+ 
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIH 564

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
            YQE G ++ AF   + + +  +G            LGHLK
Sbjct: 565 CYQETGHVQKAFSLQKEMVD--MGVRPDNKTYNSLILGHLK 603



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 257/506 (50%), Gaps = 5/506 (0%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            + E     R+   LP+      ++  L++  KFD+V + ++EMV  G   D + YG  +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 GD+  A+ LF+ M  + + P V +Y +LI GLC E ++ +AE +F  M    +V
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           PN  T+N L+DGYCK  +V+ A+     M    ++P+++TF  L+ GLCK   +  A   
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGN-LFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
              +   G  P+ F Y+ + DG  K+ +    A+ L  E     +  D +T +IL+ GLC
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G++E AE +L+ + + G++   V YN++++GYC+ GDM++A+    QM  +G+ PN +
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            F+S+ID  C+   ID A     +MV K + P V  +  LIDG  +        ++ +EM
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            E    P+V +  SLI+ L K+G+I  A     +      G    PN  +Y  +I   C 
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMV----GRGVLPNANIYNMLIDGSCT 429

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G++ +A + F +M  + +     TY ++++GL +  ++ +   +   +   G  PD + 
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVIT 489

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
              ++ GY   G+ +      E +K+
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKK 515



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 205/413 (49%), Gaps = 43/413 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++T++  + ++G ++ A+    ++E   + P   A N++++   +    D   E+ ++M
Sbjct: 279 IYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDV---MKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           V  G+   V TY +LID   G G +    +   + +EM + G +P V+ Y  LI+ LC +
Sbjct: 339 VGKGIAPSVETYNILID---GYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K++EAE + R M   GV+PN   YN L+DG C V  +  AL F+ EM  + +   +VT+
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN------LFEAM-- 279
             L+ GLCK+G+L+ A   F  +   G  P++  YN LI G+  AGN      L+E M  
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 280 --------------------------SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
                                     +L +EM +  +SPD   YN +I      G ++ A
Sbjct: 516 LGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKA 575

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L ++M   G+  +  TYNSLI G+ KEG + +   +   M  KG+ P   T+S LI G
Sbjct: 576 FSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
            C   + + A   Y EM+    +P+V +   L  GL KDG ++E   +  EM+
Sbjct: 636 HCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 177/379 (46%), Gaps = 39/379 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+++I  F EM  I++A  WV + +   + P+++  N L++G  +   F   ++  
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKA----------------------------- 138
           EEM   G   +V++YG LI+C C  G +++A                             
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 139 ------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                 L  FDEM   GI  T+V Y  LI GLC   K+ EAE MF  +   G  P++ TY
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N+L+ GY    +  + LE Y  M    L+P + TF  L+ G  K G ++     F  M +
Sbjct: 491 NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQ 549

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             + P+  VYN +I  + + G++ +A SL  EM    + PD  TYN LI G    G+L  
Sbjct: 550 MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSE 609

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            + L+  M  +G++    TY+ LI G+C   D   A     +M E G  PNV   + L  
Sbjct: 610 TKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELST 669

Query: 373 GQCKAGNIDAAMGLYTEMV 391
           G  K G +  A  + +EM+
Sbjct: 670 GLRKDGRLQEAQSICSEMI 688


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 249/469 (53%), Gaps = 7/469 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++T++ +F + G ++ AL +  K++     P+    N L+NGL KKG+        +E
Sbjct: 238 TTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQE 297

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL     TY  LI   C +G +++AL L++EM+ +G+ PTV  +  +++G C E K
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M +A      M +  ++P++ +YN L+ G+C++ ++  A     E+   NL  N+VT+  
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DGLC++G+L  A      M   G+ P++  Y  L++G CK GN+  A     EM    
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++PD F Y   I G   +G    A  L ++M  +G   +V+TYN  ++G CK G++E+A 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M   G  P+ VT++S +    + G++     ++ +M+ +   P VV +T LI   
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAH 597

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           + +G +   +  + EM E  + P+V T + LI+G  K  ++  A  FF+E  +K      
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG----I 653

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            PN   Y  +I   C  G+  +A +L++ M    +RPD+CT+  +L+ L
Sbjct: 654 FPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 258/520 (49%), Gaps = 42/520 (8%)

Query: 70  EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
           + L V+ K+     LP ++ CN +L  L  K       E Y  M   G+   V TY  ++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C  G+V +AL+L  +M ++G  P+ V + +LI+GL  + ++ +A+ + + M + G+ 
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
            + YTYN L+ GYCK   +  AL  + EM+   + P V +   +M G CK G++  A   
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M K  + P+I  YN LI G C+ GN+ EA  L  E+    +S ++ TYN LI GLC 
Sbjct: 365 LSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCR 424

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM--------------------- 345
           +G LE A  L + M   GI  +VVTY  L++G CK G+M                     
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFA 484

Query: 346 --------------EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
                          KA  +  +M  KG  P+V+T++  ++G CK GN++ A  L  +M+
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
               VPD V +T+ +    ++G+++E   ++ +ML    TP+V T + LIH    NGR+ 
Sbjct: 545 RDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLD 604

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A+ +FLE  +K       PN + Y  +I   C   ++ +A K F +M+   + P+  TY
Sbjct: 605 WAMAYFLEMQEKG----VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           T ++       +  + + L A M+   I PD+  +  +++
Sbjct: 661 TILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 237/441 (53%), Gaps = 5/441 (1%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           YG+ +D   G     + L +F++M+     P V     ++  L ++N +V+A  ++R M 
Sbjct: 171 YGI-VDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG 229

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           E G+ P + TYN ++  +CK  +V RAL+   +M      P+ VTF VL++GL K GEL+
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      MAK G+  + + YN LI G+CK G L EA++L  EM    +SP V ++N ++
Sbjct: 290 QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIM 349

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C  G++  A   L  M K+ ++ ++++YN+LI G+C+ G++ +A  +  ++  + + 
Sbjct: 350 YGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLS 409

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            N+VT+++LIDG C+ G+++ A+ L  +M+ + + PDVV +T L++G  K GNM      
Sbjct: 410 FNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEF 469

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EML   + P  F  ++ I G  K G  + A  F L++   T G    P+ + Y   + 
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKA--FKLQEEMLTKG--FPPDVITYNVFVN 525

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G + +A +L   M  D   PD+ TYT+ +   +    + +   +  DM+  G  P
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585

Query: 542 DAVINQVMVRGYQENGDLKSA 562
             V   V++  +  NG L  A
Sbjct: 586 TVVTYTVLIHAHALNGRLDWA 606



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 194/367 (52%), Gaps = 5/367 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P+V S  T++  F + G + +A   L    K  ++P I + N L+ G  + G     + 
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +E+    L  ++VTY  LID  C  GD+  AL L ++MI++GI P VV YT+L++G C
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               M+ A+  F  M   G+ P+ + Y A + G  K+ D  +A +   EML     P+V+
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVI 518

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ V ++GLCK+G L  AG     M + G  P+   Y   +  H + G+L E   +  +M
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                +P V TY +LI      G+L+ A     +M ++G++ NV+TYN LI+G+CK   M
Sbjct: 579 LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A     +M EKG+ PN  T++ LI+  C  G    A+ LY +M+ K + PD     AL
Sbjct: 639 DQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGAL 698

Query: 406 IDGLSKD 412
           +  L KD
Sbjct: 699 LKKLDKD 705



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 149/293 (50%), Gaps = 4/293 (1%)

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L +A+ +   M ++ I P V TYN ++   C  G+++ A  L+ KM + G   + VT+N 
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+G  K+G++++A  +  +M + G+  +  T++ LI G CK G +  A+ L+ EMV + 
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P V     ++ G  K+G M +  +   +ML+  + P + + ++LI+G  + G I  A 
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEA- 396

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            F L   D+      S N V Y  +I  LC  G +  A KL  DM +  + PD  TYT +
Sbjct: 397 -FIL--LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           + G  +   ML       +M+ +G+ PD       + G  + GD   AF+  E
Sbjct: 454 VNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQE 506



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 5/198 (2%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  ++  +    ++G++EEA  + +K+     +P      + ++  ++ G      
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E + +M+  G    VVTY VLI      G +  A+  F EM +KG+ P V+ Y +LI+G 
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF 632

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   KM +A   F  M+E G+ PN YTY  L++  C +     AL  Y +ML   ++P+ 
Sbjct: 633 CKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692

Query: 225 VTFGVLMDGLCKVGELRA 242
            T G L+  L K  +++A
Sbjct: 693 CTHGALLKKLDKDYKVQA 710


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 242/436 (55%), Gaps = 4/436 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   N LL+ ++K  K+D V    ++M + G+  D+ T+ ++I+C C    V 
Sbjct: 78  KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVS 137

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL++  +M+  G EP  V    L++G C  N++ +A S+   M E G  P++  YNA++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D  CK   VN A +F+ E+    ++PNVVT+  L++GLC       A      M K  + 
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN+  Y+ L+D   K G + EA  L  EM +  I PD+ TY+ LI GLC   +++ A  +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M  +G LA+VV+YN+LI+G+CK   +E  + +  +M+++G+  N VT+++LI G  +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG++D A   +++M    + PD+  +  L+ GL  +G +++ L ++++M + ++   + T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +++I G+ K G++  A + F   + K       P+ V Y  ++  LC  G + +   L+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKG----LKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 497 SDMRSDNLRPDNCTYT 512
           + M+ + L  ++CT +
Sbjct: 494 TKMKQEGLMKNDCTLS 509



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 220/420 (52%), Gaps = 4/420 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P++V +  L+  +    K     S+ + M   G+  +LYT+N +++
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C    V+ AL    +ML    +P+ VT G L++G C+   +  A +    M + G  P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  YN +ID  CK   + +A     E+E+  I P+V TY  L+ GLC   +   A  LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K+ I  NV+TY++L+D + K G + +A  +  +M    ++P++VT+SSLI+G C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ID A  ++  MV K  + DVV +  LI+G  K   +++ ++L++EM +  +  +  T 
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G F+ G +  A  FF     + D    SP+   Y  ++  LC +G++ KA  +F 
Sbjct: 369 NTLIQGFFQAGDVDKAQEFF----SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM+   +  D  TYTT++RG+ +  ++ +   L   +   G+ PD V    M+ G    G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 179/324 (55%), Gaps = 5/324 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           + P +  ++ +I +  +   + +A   +++IE   + P +    AL+NGL    ++    
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M+   +  +V+TY  L+D     G V++A  LF+EM+   I+P +V Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  +++ EA  MF  M   G + ++ +YN L++G+CK   V   ++ + EM    L  N 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ G  + G++  A  FF  M  FG+ P+I+ YN L+ G C  G L +A+ +  +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+K E+  D+ TY  +I+G+C  G++E A  L   +  +G+  ++VTY +++ G C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 345 MEKALSVCSQMTEKGVEPNVVTFS 368
           + +  ++ ++M ++G+  N  T S
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 4/324 (1%)

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A + F  M K   FP+I  +N L+    K       +SL  +ME   I  D++T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           I+I   C   Q+  A  +L KM K G   + VT  SL++G+C+   +  A+S+  +M E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +P++V ++++ID  CK   ++ A   + E+  K + P+VV +TAL++GL       + 
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL  +M++ KITP+V T S+L+    KNG++  A   F E    +      P+ V Y++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS----IDPDIVTYSS 300

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC   +I +A+++F  M S     D  +Y T++ G  +AKR+ D M L  +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           +V + V    +++G+ + GD+  A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKA 384



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +N A++ + +M+     P++V F  L+  + K+ +     +    M   G+  +++ +N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+  C    +  A+S+  +M K    PD  T   L+ G C   ++  A  L+ KM + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              ++V YN++ID  CK   +  A     ++  KG+ PNVVT+++L++G C +     A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L ++M+ K + P+V+ ++AL+D   K+G + E   L++EM+   I P + T SSLI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             + RI  A   F    D      C  + V Y  +I   C   ++    KLF +M    L
Sbjct: 306 CLHDRIDEANQMF----DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +  TY T+++G  +A  +       + M   GI PD     +++ G  +NG+L+ A 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 30/132 (22%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+    + G +E+AL ++   +K E+   I     ++ G+ K GK +  W  +  +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 111 VLCGLVADVVTYGVLI---------------------------DCCCGQGDVMKALNLFD 143
            L GL  D+VTY  ++                           DC    GD+  +  L  
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521

Query: 144 EMIDKGIEPTVV 155
           +M+  G  P+++
Sbjct: 522 KMLSCGYAPSLL 533


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 260/510 (50%), Gaps = 14/510 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S F   +  F++M H+             P I   N LL  L++   +DSV   Y +M  
Sbjct: 83  SNFDDALAYFNQMVHMNP----------FPCITQFNQLLAALVRMKHYDSVVSIYRKMEF 132

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+   V T  +LI+C C    V    ++  ++   G +P+++ +  LI+GLC E ++VE
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE 192

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A      +   G  P +YT+  +++G CK+   + A+ +  +M+  + +P VV++ +++D
Sbjct: 193 AMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIID 252

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LCK   +  A + F HM   G+ P +  YN LI G C +G   +A  L  EM ++ + P
Sbjct: 253 SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKP 312

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV T++IL+  LC  G +  A  +  KM +  +  ++VTY+SLI G CK    +++ ++ 
Sbjct: 313 DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLL 372

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  + + P+VVTFS  +D  CK G +  A  +   M+ + L P+VV + +L+DG    
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             M E  +++  M+     P V + + LI G  K+ RI  A   F E + K      +PN
Sbjct: 433 SQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG----LTPN 488

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + +  +I  LC  G+   A +LF  M S    PD  TY+T+L G  +   + + + L  
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + K  + P+ VI ++++ G  + G L+ A
Sbjct: 549 ALKKSQLKPNHVICKILLGGMCKAGKLEDA 578



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 237/448 (52%), Gaps = 11/448 (2%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           + FS +G I        K+   P+I   N L+NGL  +G+     E  + ++  G    V
Sbjct: 157 LGFSVLGKI-------FKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTV 209

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T+ ++++  C  G    A+    +M++   EP VV Y+I+I  LC    + EA  +F  
Sbjct: 210 YTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYH 269

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR  G+ P + TYN+L+ G C      +A   + EML  N++P+VVTF +L+D LCK G 
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A + F  M +  + P+I  Y+ LI G CK+    E+ +L +EM    I PDV T++I
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
            +   C  G +  A+ ++  M + G+  NVVTYNSL+DGYC    M++A  V   M  KG
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+V++++ LI G CK+  ID A  L+ EM  K L P+ +  T LI GL + G      
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L+K+M      P + T S+L+ G  K+G +  AL  F E   K+      PNHV+   +
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF-EALKKSQ---LKPNHVICKIL 565

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPD 507
           +  +C  G++  A +LFS +  + L+PD
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 256/491 (52%), Gaps = 7/491 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ L+ A   M H +  + +YRK+E   V  ++     L+N L         +    ++ 
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G    ++T+  LI+  C +G +++A+   D ++ +G +PTV  +T++++GLC   K  
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A    + M E    P + +Y+ ++D  CK   VN A++ ++ M    + P VVT+  L+
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G+C  G+ + A   F  M ++ + P++  ++ L+D  CK G + EA+S+  +M +  + 
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TY+ LI G+C     + +  LL +M    I  +VVT++  +D +CK+G + +A S+
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M E+G+ PNVVT++SL+DG C    +D A  ++  MV K   PDV+ +  LI G  K
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCK 466

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + E  +L+ EM    +TP+  T ++LI GL + GR   A   F     K     C P
Sbjct: 467 SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELF----KKMGSHGCPP 522

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + Y+ ++   C  G + +A  LF  ++   L+P++     +L G+ +A ++ D   L 
Sbjct: 523 DLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELF 582

Query: 532 ADMIKMGIVPD 542
           + +    + PD
Sbjct: 583 SSLSIEELQPD 593



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 245/475 (51%), Gaps = 4/475 (0%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           FD    ++ +MV       +  +  L+            ++++ +M   G+  +V   TI
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+ LC+ + +    S+   + + G  P++ T+N L++G C    +  A+E    ++   
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            QP V T  ++++GLCK+G+  AA  +   M +    P +  Y+ +ID  CK   + EA+
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L   M    ISP V TYN LI G+C  GQ + A  L ++M +  +  +VVT++ L+D  
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CKEG + +ALSV  +M +  +EP++VT+SSLI G CK+     +  L  EM+ +++ PDV
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V F+  +D   K G + E   +   M+E  + P+V T +SL+ G   + ++  A   F  
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +K     C+P+ + Y  +I+  C   +I +A +LF +M    L P++ T+TT++ GL 
Sbjct: 445 MVNKG----CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +A R      L   M   G  PD +    ++ G+ ++G L  A    E LK+S++
Sbjct: 501 QAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 185/324 (57%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R I + P +   N+L+ G+   G++      ++EM+   +  DVVT+ +L+D  C +G V
Sbjct: 271 RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVV 330

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           ++AL++F +MI   +EP +V Y+ LIHG+C  +   E+ ++   M    + P++ T++  
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIW 390

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +D +CK   V+ A    + M+   L+PNVVT+  LMDG C   ++  A   F  M   G 
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC 450

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P++  YN LI G+CK+  + EA  L  EM    ++P+  T+  LI GLC  G+   A+ 
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L +KM   G   +++TY++L+ G+CK G +++AL++   + +  ++PN V    L+ G C
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMC 570

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDV 399
           KAG ++ A  L++ + I+ L PDV
Sbjct: 571 KAGKLEDAKELFSSLSIEELQPDV 594



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 214/390 (54%), Gaps = 5/390 (1%)

Query: 50  FNPSVFS-TLII-AFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + P+V++ T+I+    ++G    A+ W+ + +E+   P + + + +++ L K    +   
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + +  M   G+   VVTY  LI   C  G   +A  LF EM++  ++P VV ++IL+  L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E  ++EA S+F  M +  + P++ TY++L+ G CK +    +    +EML  N++P+V
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF + +D  CK G +  A +    M + G+ PN+  YN L+DG+C    + EA  +   
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     +PDV +YNILIKG C   +++ A+ L  +M  +G+  N +T+ +LI G C+ G 
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
              A  +  +M   G  P+++T+S+L+ G CK G++D A+ L+  +    L P+ V+   
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           L+ G+ K G +++   L+  +   ++ P V
Sbjct: 565 LLGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 266/530 (50%), Gaps = 28/530 (5%)

Query: 50  FNPSV--FSTLIIAFSE--MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + PSV  ++ +++A S+  +      L    +  V P +   N L+  L  +G+ +    
Sbjct: 114 YAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGL 164
              +M   G   + VTY  L+   C  G++  A  +   M ++G  +P +V +  +++GL
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +M  A  +F  M   G+ P++ +YN L+ GYCKV  ++ +L  + EM    L P+V
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDV 293

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+   CK G L  A      M + G+  N   +  LIDG CK G L +A+    E
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE 353

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M K  I P V  YN LI G C +G+++ A  L+++M  + +  +VVTY+++I GYCK G+
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  +  +M +KGV P+ +T+SSLI G C+   ++ A  L+  M+   + PD   +T 
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA--LNFFLEKTD 462
           LIDG  K+GN+++ L L+ EM+   + P V T S LI+GL K+ R   A  L F L   D
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 463 KTDGGYCSPNHVLY---------------AAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
                   P+++ Y                A+++  C  G + +A K++  M   N + D
Sbjct: 534 PV------PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              Y+ ++ G  R   +   +     M++ G  P++     +VRG  E G
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 222/417 (53%), Gaps = 6/417 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P+V  Y  ++  L ++  +  A     SM   GV PN+YTYN L+   C    +  A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-VFPNIFVYNCLID 267
           +    +M      PN VT+  L+   C+ GEL  A      M + G   PN+  +N +++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG +  A  +  EM +  ++PDV +YN L+ G C VG L  +  +  +M + G++ 
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVT+ SLI   CK G++E+A+++ +QM E+G+  N VTF++LIDG CK G +D A+   
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    + P VV + ALI+G  K G M     L +EM   ++ P V T S++I G  K 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G + +A     +   K       P+ + Y+++I+ LC + ++  A +LF +M    ++PD
Sbjct: 412 GNLDSAFQLNQKMLKKG----VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             TYTT++ G  +   +   + L  +MI+ G++PD V   V++ G  ++   K A R
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 207/433 (47%), Gaps = 55/433 (12%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  + ++G + E+L V+ ++    ++P +    +L++   K G  +       +M 
Sbjct: 261 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + VT+  LID  C +G +  AL   +EM   GI+P+VV Y  LI+G C   +M 
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R M    V P++ TY+ ++ GYCKV +++ A +   +ML   + P+ +T+  L+
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+   L  A   F +M + GV P+ F Y  LIDGHCK GN+ +A+SL  EM +  + 
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------------- 335
           PDV TY++LI GL    + + A  LL K+Y E  + + + Y++L                
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560

Query: 336 ----------------------------------IDGYCKEGDMEKALSVCSQMTEKGVE 361
                                             I G+C+ G++ KALS   QM   G  
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN  +  SL+ G  + G +  A     +++    + D     ALID   K+G   +  + 
Sbjct: 621 PNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEG--MDYFQA 678

Query: 422 YKEMLEAKITPSV 434
             E+  ++ +PSV
Sbjct: 679 QGEIWYSESSPSV 691



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 186/371 (50%), Gaps = 35/371 (9%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  YN ++     A +L  A    S M +  ++P+V+TYNIL++ LC  G+LE A
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLID 372
            G++  M   G   N VTYN+L+  +C+ G+++ A  V S M E+G  +PN+VTF+S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKAG ++ A  ++ EMV + L PDVV +  L+ G  K G + E+L ++ EM +  + P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDK-----------TDGGYC------------ 469
            V T +SLIH   K G +  A+    +  ++              G+C            
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 470 --------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                    P+ V Y A+I   C  G++  A +L  +M +  ++PD  TY+T++ G  + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
             +     L   M+K G++PDA+    ++RG  E   L  A  C  F    ++G    E 
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA--CELFENMLQLGVQPDEF 469

Query: 582 HTTRSFLGHLK 592
             T    GH K
Sbjct: 470 TYTTLIDGHCK 480


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 268/546 (49%), Gaps = 45/546 (8%)

Query: 58  LIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     +    M   
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215

Query: 114 GLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           G V   DVV Y  +IDC   +GDV KA +LF EM+ +GI P +V Y+ ++H LC    M 
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +AE+  R M   GV+P+ +TYN L+ GY        A+  + EM  H++ P+VVT  +LM
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LCK G+++ A + F  MA  G  P++F Y  +++G+   G L +   L   M    I+
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD++T+++LIK     G L+ A  +  +M   G+  +VVTY ++I   C+ G M+ A+  
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455

Query: 352 CSQMTEKGVEP-----------------------------------NVVTFSSLIDGQCK 376
            +QM ++GV P                                   ++V FSS+I+  CK
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G I  A  ++   V     PD VV++ L+DG    G M++ LR++  M+ A I P+V  
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             +L++G  K GRI   L+ F E   K       P+ +LY  II  L   G+ + A   F
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKG----IKPSTILYNIIIDGLFVAGRTVPAKVKF 631

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    +  + CTY  +LRG  + +   + + L  ++  M +  D +    M+ G  + 
Sbjct: 632 HEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 691

Query: 557 GDLKSA 562
             ++ A
Sbjct: 692 RRVEEA 697



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 227/465 (48%), Gaps = 10/465 (2%)

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN-LFDEMIDKGIEPTVVIYTILIHGL 164
           F+ +++  GL  D++    L+   C      +AL+ L     + G  P V  Y+IL+  L
Sbjct: 137 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 196

Query: 165 CNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           C++ K  +A+ + R M E G V  P++  Y  ++D + K  DVN+A + + EM+   + P
Sbjct: 197 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPP 256

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           ++VT+  ++  LCK   +  A  F   M   GV P+ + YN LI G+   G   EA+ + 
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 316

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM +  I PDV T N+L+  LC  G+++ A  +   M  +G   +V +Y  +++GY  +
Sbjct: 317 KEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATK 376

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +     +   M   G+ P++ TFS LI      G +D AM ++ EM    + PDVV +
Sbjct: 377 GCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 436

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T +I  L + G M + +  + +M++  + P  +    LI G   +G +  A    LE  +
Sbjct: 437 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMN 496

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                    + V +++II  LC  G+I+ A  +F    +    PD   Y+ ++ G     
Sbjct: 497 NG----MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK---SAFR 564
           +M   + +   M+  GI P+ V+   +V GY + G +    S FR
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 212/406 (52%), Gaps = 3/406 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI  +S  G  +EA+ V+   R+  +LP +   N L+  L K GK     + ++ M 
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           + G   DV +Y ++++    +G ++   +LFD M+  GI P +  +++LI    N   + 
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLD 415

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F  MR+ GV P++ TY  ++   C++  ++ A+E +++M+   + P+   +  L+
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 475

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C  G L  A    + +   G+  +I  ++ +I+  CK G + +A ++          
Sbjct: 476 QGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH 535

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD   Y++L+ G C VG++E A  +   M   GI  NVV Y +L++GYCK G +++ LS+
Sbjct: 536 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSL 595

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M +KG++P+ + ++ +IDG   AG    A   + EM    +  +   +  ++ G  K
Sbjct: 596 FREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFK 655

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +    E + L+KE+    +   + T++++I G+F+  R+  A + F
Sbjct: 656 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 224/447 (50%), Gaps = 7/447 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRS 179
           TY +L+DCC        AL  F +++  G+   ++I   L+ G C   +  EA + +   
Sbjct: 117 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 176

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL--QPNVVTFGVLMDGLCKV 237
             E G VP++++Y+ L+   C      +A +    M        P+VV +  ++D   K 
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A + F  M + G+ P++  Y+ ++   CKA  + +A +   +M    + PD +TY
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G    GQ + A  + ++M +  IL +VVT N L+   CK G +++A  V   M  
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM 356

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG  P+V ++  +++G    G +     L+  M+   + PD+  F+ LI   +  G + +
Sbjct: 357 KGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDK 416

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            + ++ EM +  + P V T +++I  L + G++ +A+  F +  D+      +P+   Y 
Sbjct: 417 AMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG----VAPDKYAYH 472

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +IQ  C  G +LKA +L  ++ ++ +R D   +++++  L +  R++D   +    + +
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G  PDAV+  +++ GY   G ++ A R
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALR 559



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 188/377 (49%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  +I + N L+ G C+A    EA+
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+Y+IL+K LC  G+   A+ LL+ M + G +   +VV Y ++I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D + KEGD+ KA  +  +M ++G+ P++VT+SS++   CKA  +  A     +MV K ++
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   +  LI G S  G  KE +R++KEM    I P V T++ L+  L K G+I  A + 
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P+   ++ +I+A   
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++PD  TYTT++  L R  +M D M     MI  G+ PD   
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 471 YHCLIQGFCTHGSLLKA 487



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  D+++   L+ G  +     E L
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +  L +     G  CSP+ V Y  
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD--LLRMMAEGGAVCSPDVVAYTT 228

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY++++  L +A+ M      L  M+  G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++PD      ++ GY   G  K A R  + ++   I
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 4/157 (2%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           VF+A+ S  I   N  V+ TL+  + ++G I+E L ++R++    + P+    N +++GL
Sbjct: 560 VFDAMVSAGIEP-NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
              G+       + EM   G+  +  TY +++          +A+ LF E+    ++  +
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDI 678

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +    +I G+    ++ EA+ +F S+   G+VP + T
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/567 (29%), Positives = 277/567 (48%), Gaps = 45/567 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + N  + + L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     
Sbjct: 156 RVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQAD 215

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   +VV Y  +ID    +GDV KA +LF EM+ +GI P +V Y  ++H
Sbjct: 216 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 275

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M    V+PN +TYN L+ GY        A+  + EM  H++ P
Sbjct: 276 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 335

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLF 276
           +VVT  +LM  LCK G+++ A + F  MA  G  P++F YN +++G+   G      +LF
Sbjct: 336 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 395

Query: 277 E-----------------------------AMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           +                             AM + +EM    + PDV TY  +I  LC +
Sbjct: 396 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 455

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A     +M  +G+  +   YN LI G+C  G + KA  + S++   G+  ++V F
Sbjct: 456 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 515

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SS+I+  CK G +  A  ++   V   L PD VV++ L+DG    G M++ LR++  M+ 
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+V    +L++G  K GRI   L+ F E   +       P+ +LY+ II  L   G
Sbjct: 576 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG----IKPSTILYSIIIDGLFQAG 631

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  D CTY  +LRGL + +   + + L  ++  M +  + +   
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 691

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRI 574
            M+ G  +   ++ A      +  SR+
Sbjct: 692 TMIDGMFQTRRVEEAKDLFASISRSRL 718



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 258/512 (50%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVVT  +L+   C  G + +A ++FD M  KG  P V  Y I+++G   +  +
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 388

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P+ YT+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 389 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 448

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + YNCLI G C  G+L +A  L SE+    +
Sbjct: 449 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  ++ +I  LC +G++  A+ +       G+  + V Y+ L+DGYC  G MEKAL 
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 568

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPNVV + +L++G CK G ID  + L+ EM+ + + P  ++++ +IDGL 
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I   + T + ++ GLFKN                       
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR---------------------- 666

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ +  T  TM+ G+ + +R+ +   L
Sbjct: 667 -------------CFDEAIF----LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + +  +VP+ V   +M+    + G ++ A
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEA 741



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 240/510 (47%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 126 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 185

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y+IL+  LC++ K  +A+ + R M E G V  PN+  YN ++DG+ K 
Sbjct: 186 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 245

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P++VT+  ++  LCK   +  A  F   M    V PN + Y
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G+   G   EA+ +  EM +  I PDV T ++L+  LC  G+++ A  +   M  
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 365

Query: 323 EGILANVVTYNSLIDGYCKEG---DM--------------------------------EK 347
           +G   +V +YN +++GY  +G   DM                                +K
Sbjct: 366 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 425

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + + PD   +  LI 
Sbjct: 426 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 485

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +   SS+I+ L K GR+ +A N F    D T   
Sbjct: 486 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF----DLTVNV 541

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V+Y+ ++   C  G++ KA ++F  M S  + P+   Y T++ G  +  R+ + 
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  + G
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAG 631



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  NI + N L++G C+A    EA+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+Y+IL+K LC  G+   A+ LL+ M + G +   NVV YN++I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  +  +M ++G+ P++VT++S++   CKA  +D A     +MV K ++
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   +  LI G S  G  KE +R++KEM    I P V T+S L+  L K G+I  A + 
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P+   +  +I+A   
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++PD  TY T++  L R  +M D M     MI  G+ PD   
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 480 YNCLIQGFCTHGSLLKA 496



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 185/340 (54%), Gaps = 3/340 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI A++  G +++A+ ++ ++    V P +     ++  L + GK D   E + +M
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D   Y  LI   C  G ++KA  L  E+++ G+   +V ++ +I+ LC   ++
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           ++A+++F      G+ P+   Y+ LMDGYC V  + +AL  +  M+   ++PNVV +  L
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +    + F  M + G+ P+  +Y+ +IDG  +AG    A     EM +  I
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + D+ TYNI+++GL      + A  L +++    +  N++T N++IDG  +   +E+A  
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           + + ++   + PNVVT+S +I    K G ++ A  +++ M
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM 748



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  ++++   L++G  +     E L
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +    +     G  CSPN V Y  
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPNVVAYNT 237

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY +++  L +A+ M      L  M+   
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++P+      ++ GY   G  K A R  + ++   I
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/117 (21%), Positives = 60/117 (51%), Gaps = 3/117 (2%)

Query: 69  EEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +EA+++++++  +     I   N +++G+ +  + +   + +  +    LV +VVTY ++
Sbjct: 669 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIM 728

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           I     +G V +A ++F  M + G EP   +   ++  L  +N++V A +    + E
Sbjct: 729 ITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 785


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 253/502 (50%), Gaps = 8/502 (1%)

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLVADVV 120
           FSE   +E  L + +  +++P  +A + +++     G  D   EFY   + +   V DV 
Sbjct: 82  FSE---VESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVF 138

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           +   L++     G V  A  ++DEM+D+  E       I++ GLC E K+ +   +    
Sbjct: 139 SCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKR 198

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G +PN+  YN L+DGYCK  D  RA   + E+      P V T+G +++G CK G+ 
Sbjct: 199 WGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKF 258

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
                  V M++ G+  +I +YN +ID   K G   EA      M K    PD+ TYNIL
Sbjct: 259 EVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNIL 318

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G C  G++  AE LL++  K G+L N V+Y  LI  YCK+G+  +AL +  +M+E+G 
Sbjct: 319 ITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH 378

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +P++VT+++LI G   AG +D A+ +  +MV K ++PD  ++  L+ GL K G +     
Sbjct: 379 KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKV 438

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  EML+  + P  F  ++L+ G  ++G    A   F    +K       P  V Y A+I
Sbjct: 439 LLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKG----IDPGVVGYNAMI 494

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           +  C  G +  A   F  M      PD  TY+T++ G ++   +   + +   M+K    
Sbjct: 495 KGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACK 554

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           P+ V   +++ G+  +GD+  A
Sbjct: 555 PNVVTYTLLINGFCLSGDINRA 576



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 257/521 (49%), Gaps = 27/521 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + + G  E A  +++++++   LP ++   A++NG  KKGKF+ V +  
Sbjct: 206 NIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLL 265

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GL   +  Y  +ID     G  ++A +    MI  G +P +  Y ILI G C+ 
Sbjct: 266 VEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSC 325

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +AE +     + G++PN  +Y  L+  YCK  +  RAL+   +M     +P++VT+
Sbjct: 326 GEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTY 385

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GL   GE+  A      M + GV P+  +YN L+ G CK G L  A  L +EM  
Sbjct: 386 AALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLD 445

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD F    L+ G    G  E A+ L +   ++GI   VV YN++I GYCK G M+ 
Sbjct: 446 QNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKD 505

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL    +M +    P+  T+S++IDG  K  ++  A+ ++  MV  +  P+VV +T LI+
Sbjct: 506 ALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLIN 565

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF----LEKTDK 463
           G    G++    + +K+ML  ++ P+V T + LI    K   ++ A +FF    +EK   
Sbjct: 566 GFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEK--- 622

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKL------------FSDMRSDNLRPDNCTY 511
                C PN V Y  ++  L  +   + +++             F  M SD       +Y
Sbjct: 623 -----CLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASY 677

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++L  L + K +   + L   M+  G +PD V    ++ G
Sbjct: 678 NSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHG 718



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 246/538 (45%), Gaps = 78/538 (14%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           FS +I  F++ G ++ AL  YR        +P + +CN+LLN L+K GK +   + Y+EM
Sbjct: 104 FSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEM 163

Query: 111 V-----------------LC------------------GLVADVVTYGVLIDCCCGQGDV 135
           V                 LC                  G + ++V Y  LID  C +GD 
Sbjct: 164 VDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDT 223

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM------------------------- 170
            +A  LF E+  KG  PTV  Y  +I+G C + K                          
Sbjct: 224 ERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNI 283

Query: 171 ----------VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
                     +EA      M + G  P++ TYN L+ G C   +V++A +   + +   L
Sbjct: 284 IDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGL 343

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PN V++  L+   CK GE   A +  + M++ G  P++  Y  LI G   AG +  A++
Sbjct: 344 LPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALT 403

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           + ++M +  + PD   YN+L+ GLC  G+L  A+ LL +M  + +  +     +L+DG+ 
Sbjct: 404 VRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFI 463

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           + GD E+A  +     EKG++P VV ++++I G CK G +  A+  +  M+     PD  
Sbjct: 464 RHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEF 523

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            ++ +IDG  K  ++   LR++  M++    P+V T + LI+G   +G I+ A   F + 
Sbjct: 524 TYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQM 583

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                     PN V Y  +I   C    + KA   F  M  +   P++ TY  ++ GL
Sbjct: 584 LSLR----LKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 195/404 (48%), Gaps = 5/404 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVL 230
           E ES+ + M+   ++P    ++ ++  +     V+RALEFY   +  H+  P+V +   L
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ L K G++  A   +  M       + +    ++ G CK G + +   L  +      
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++  YN LI G C  G  E A  L +++  +G L  V TY ++I+G+CK+G  E    
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M+E+G++ ++  ++++ID Q K G    A      M+     PD+  +  LI G  
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC 323

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + +  +L ++ ++  + P+  + + LIH   K G    AL+  ++ +++       
Sbjct: 324 SCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH----K 379

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V YAA+I  L   G++  A  + + M    + PD   Y  ++ GL +  R+    +L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           LA+M+   + PDA I   +V G+  +GD + A +  E   E  I
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGI 483



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 162/340 (47%), Gaps = 15/340 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI      G ++ AL V  K+    VLP     N L++GL KKG+  +      EM
Sbjct: 384 TYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM 443

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +  D      L+D     GD  +A  LF+  I+KGI+P VV Y  +I G C    M
Sbjct: 444 LDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMM 503

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   F+ M +    P+ +TY+ ++DGY K+ D++ AL  +  M+    +PNVVT+ +L
Sbjct: 504 KDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLL 563

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G C  G++  A   F  M    + PN+  Y  LI   CK  NL +A S   +M   + 
Sbjct: 564 INGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKC 623

Query: 291 SPDVFTYNILIKGLCG----------VGQLEGAEGL--LQKMYKEGILANVVTYNSLIDG 338
            P+  TYN L+ GL              Q E +  L     M  +G      +YNS++  
Sbjct: 624 LPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILIC 683

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            C+   ++ AL +  +M  KG  P+ V+  +L+ G C  G
Sbjct: 684 LCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEG 723



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 134/314 (42%), Gaps = 17/314 (5%)

Query: 52  PSVF--STLIIAFSEMGHIEEALWVYR-KIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P  F  +TL+  F   G  EEA  ++   IE  + P +   NA++ G  K G        
Sbjct: 450 PDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLC 509

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++ M+      D  TY  +ID      D+  AL +F  M+    +P VV YT+LI+G C 
Sbjct: 510 FKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCL 569

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  AE  F+ M    + PN+ TY  L+  +CK  ++ +A  F+ +ML     PN VT
Sbjct: 570 SGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVT 629

Query: 227 FGVLMDGLCK-----VGELRAAGN-------FFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +  LM+GL       +   R+           F  M   G       YN ++   C+   
Sbjct: 630 YNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKM 689

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+ L  +M      PD  +   L+ GLC  G+ +    ++     E  L   V Y+ 
Sbjct: 690 VKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSE 749

Query: 335 LIDGYCKEGDMEKA 348
            +D +  +G   +A
Sbjct: 750 KLDAFLSQGQTSEA 763



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
            F  + SL + K N   ++ LI  F +  ++ +A   + ++   + LP     N L+NGL
Sbjct: 579 TFKQMLSLRL-KPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637

Query: 95  IKKGKF------------DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
                F              V E +  M+  G      +Y  ++ C C    V  AL+L 
Sbjct: 638 TNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLR 697

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENK 169
           D+M+ KG  P  V    L+HGLC E +
Sbjct: 698 DKMMSKGFLPDPVSLVALLHGLCLEGR 724


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 242/436 (55%), Gaps = 4/436 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   N LL+ ++K  K+D V    ++M + G+  D+ T+ ++I+C C    V 
Sbjct: 78  KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVS 137

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL++  +M+  G EP  V    L++G C  N++ +A S+   M E G  P++  YNA++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D  CK   VN A +F+ E+    ++PNVVT+  L++GLC       A      M K  + 
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN+  Y+ L+D   K G + EA  L  EM +  I PD+ TY+ L+ GLC   +++ A  +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQM 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M  +G LA+VV+YN+LI+G+CK   +E  + +  +M+++G+  N VT+++LI G  +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG++D A   +++M    + PD+  +  L+ GL  +G +++ L ++++M + ++   + T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +++I G+ K G++  A + F   + K       P+ V Y  ++  LC  G + +   L+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKG----LKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 497 SDMRSDNLRPDNCTYT 512
           + M+ + L  ++CT +
Sbjct: 494 TKMKQEGLMKNDCTLS 509



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 220/420 (52%), Gaps = 4/420 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF +M+     P++V +  L+  +    K     S+ + M   G+  +LYT+N +++
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C    V+ AL    +ML    +P+ VT G L++G C+   +  A +    M + G  P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  YN +ID  CK   + +A     E+E+  I P+V TY  L+ GLC   +   A  LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K+ I  NV+TY++L+D + K G + +A  +  +M    ++P++VT+SSL++G C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ID A  ++  MV K  + DVV +  LI+G  K   +++ ++L++EM +  +  +  T 
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G F+ G +  A  FF     + D    SP+   Y  ++  LC +G++ KA  +F 
Sbjct: 369 NTLIQGFFQAGDVDKAQEFF----SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM+   +  D  TYTT++RG+ +  ++ +   L   +   G+ PD V    M+ G    G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 179/324 (55%), Gaps = 5/324 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           + P +  ++ +I +  +   + +A   +++IE   + P +    AL+NGL    ++    
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               +M+   +  +V+TY  L+D     G V++A  LF+EM+   I+P +V Y+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  +++ EA  MF  M   G + ++ +YN L++G+CK   V   ++ + EM    L  N 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ G  + G++  A  FF  M  FG+ P+I+ YN L+ G C  G L +A+ +  +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+K E+  D+ TY  +I+G+C  G++E A  L   +  +G+  ++VTY +++ G C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 345 MEKALSVCSQMTEKGVEPNVVTFS 368
           + +  ++ ++M ++G+  N  T S
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 175/324 (54%), Gaps = 4/324 (1%)

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A + F  M K   FP+I  +N L+    K       +SL  +ME   I  D++T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           I+I   C   Q+  A  +L KM K G   + VT  SL++G+C+   +  A+S+  +M E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G +P++V ++++ID  CK   ++ A   + E+  K + P+VV +TAL++GL       + 
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL  +M++ KITP+V T S+L+    KNG++  A   F E    +      P+ V Y++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS----IDPDIVTYSS 300

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC   +I +A+++F  M S     D  +Y T++ G  +AKR+ D M L  +M + G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           +V + V    +++G+ + GD+  A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKA 384



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 178/359 (49%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +N A++ + +M+     P++V F  L+  + K+ +     +    M   G+  +++ +N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+  C    +  A+S+  +M K    PD  T   L+ G C   ++  A  L+ KM + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              ++V YN++ID  CK   +  A     ++  KG+ PNVVT+++L++G C +     A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L ++M+ K + P+V+ ++AL+D   K+G + E   L++EM+   I P + T SSL++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             + RI  A   F    D      C  + V Y  +I   C   ++    KLF +M    L
Sbjct: 306 CLHDRIDEANQMF----DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +  TY T+++G  +A  +       + M   GI PD     +++ G  +NG+L+ A 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 30/132 (22%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+    + G +E+AL ++   +K E+   I     ++ G+ K GK +  W  +  +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 111 VLCGLVADVVTYGVLI---------------------------DCCCGQGDVMKALNLFD 143
            L GL  D+VTY  ++                           DC    GD+  +  L  
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521

Query: 144 EMIDKGIEPTVV 155
           +M+  G  P+++
Sbjct: 522 KMLSCGYAPSLL 533


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/588 (28%), Positives = 284/588 (48%), Gaps = 34/588 (5%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K H    S+ + ++S  IP   P++++   LI +F  +  +  A  V  KI  L   P  
Sbjct: 75  KHHSTLLSLSHQMDSFGIP---PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDT 131

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ G+  +GK       +++M+  G   DVVTYG LI+  C  G+   A+ L   
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ K  +P V  Y  +I  LC + ++ EA ++F  M   G+ P+++TYN+L+   C + +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   +EM+   + P+VV+F  ++D LCK G++  A +    M + GV PN+  Y  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA----------- 313
           L+DGHC    + EA+ +   M      P+V +YN LI G C + +++ A           
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 314 --------EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
                     +   M  +G + NV++YN+LI+GYCK   ++KA+ +  +M  + + P+ V
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+S+LI G C    +  A+ L+ EMV  S +P++V +  L+D L K+  + E + L K +
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
             + + P +   +  I G+ + G +  A + F   + K       P+   Y+ +I  LC 
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG----LQPDVWTYSIMINGLCR 547

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + +ASKLF +M  +    + C Y T+ RG LR       + LL +M+  G   DA  
Sbjct: 548 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 607

Query: 546 NQVMVRGYQENG---DLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
             + V+   ++G    LK   R       +   SS T  H  +  + H
Sbjct: 608 MTLFVKMLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISH 655



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 249/509 (48%), Gaps = 27/509 (5%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           +++  P+    N LL  + K     ++     +M   G+  ++ T  +LI+  C    V 
Sbjct: 54  RMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVG 113

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            A ++  +++  G +P    +T LI G+C E K+ EA  +F  M   G  P++ TY  L+
Sbjct: 114 FAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLI 173

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +G CKV + + A+     M+  N QPNV  +  ++D LCK  ++  A N F  M   G+ 
Sbjct: 174 NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+IF YN LI   C         +L +EM   +I PDV ++N ++  LC  G++  A  +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + KM + G+  NVVTY +L+DG+C   +M++A+ V   M  KG  PNV+++++LI+G CK
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353

Query: 377 AG-------------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
                                N+D A+ ++  MV K  +P+V+ +  LI+G  K   + +
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVL 475
            + L+ EM   ++ P   T S+LIHGL    R+ +A+  F E         CS  PN V 
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV------ACSQIPNLVT 467

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++  LC +  + +A  L   +   NL PD       + G+ RA  +     L +++ 
Sbjct: 468 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 527

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             G+ PD     +M+ G    G L  A +
Sbjct: 528 SKGLQPDVWTYSIMINGLCRRGLLDEASK 556



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 213/428 (49%), Gaps = 15/428 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ F+ M+     P+ V +  L+  +          S+   M   G+ PN+YT + L++
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V  A     ++L    QP+  TF  L+ G+C  G++  A + F  M   G  P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y  LI+G CK GN   A+ L   M +    P+VF YN +I  LC   Q+  A  L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M +  + P+VV+F++++D  CK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +  +M+ + + P+VV +TAL+DG      M E ++++  M+     P+V + 
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 438 SSLIHGLFKNGRISNALNFF---------------LEKTDKTDGGYCSPNHVLYAAIIQA 482
           ++LI+G  K  RI  A+++                ++  D      C PN + Y  +I  
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C   +I KA  LF +M    L PD  TY+T++ GL   +R+ D + L  +M+    +P+
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 543 AVINQVMV 550
            V  ++++
Sbjct: 465 LVTYRILL 472



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 210/427 (49%), Gaps = 31/427 (7%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFS---EMGHIEEALWVY 75
           + ++L K R+        FN  + +     +P +F+  +LI A     E  H+   L   
Sbjct: 207 IIDSLCKDRQ----VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
              +++P + + N +++ L K+GK     +  ++M+  G+  +VVTY  L+D  C   ++
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK-------------------MVEAESM 176
            +A+ +FD M+ KG  P V+ Y  LI+G C   +                   M EA  +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F +M   G +PN+ +YN L++GYCK+  +++A+  + EM    L P+ VT+  L+ GLC 
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           V  L+ A   F  M      PN+  Y  L+D  CK   L EAM+L   +E   + PD+  
Sbjct: 443 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
            NI I G+C  G+LE A  L   +  +G+  +V TY+ +I+G C+ G +++A  +  +M 
Sbjct: 503 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 562

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG--- 413
           E G   N   ++++  G  +      A+ L  EMV +    D    T  +  LS DG   
Sbjct: 563 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 622

Query: 414 NMKETLR 420
           ++K+ LR
Sbjct: 623 SLKQILR 629


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 243/460 (52%), Gaps = 11/460 (2%)

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
             F++EM   G + +VVTY  +ID  C      +A      M  KG+EP ++ + ++I+G
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC + ++ E   +   M   G VP+  TYN L++GYCK  + ++AL  + EM+ + L PN
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+  L++ +CK G L  A  FF  M   G+ PN   Y  +I+G  + G L EA  + +
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +    P + TYN LI G C +G++E A GLLQ M  +G+L +VV+Y+++I G+ +  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++++A  +  +M  K V P+ VT+SSLI G C+   +  A  ++ EM+   L PD   +T
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA----LNFFLE 459
            LI+   K+G++ + L L+ EM++    P   T + LI+GL K  R   A    L  F +
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYD 362

Query: 460 KTDKTDGGY-------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            +  +   Y       C+       A+++  C  G + +A ++F  M + N +P+   Y 
Sbjct: 363 DSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYN 422

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ G  R   +L    L  +M+ +  VP  V    +V+ 
Sbjct: 423 VIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 256/515 (49%), Gaps = 20/515 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP +   N +++G  K  + D  + F   M L GL  +++T+ ++I+  C  G + +   
Sbjct: 15  LPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  EM  KG  P  V Y  L++G C E    +A  +   M   G+ PN+ TY +L++  C
Sbjct: 75  VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMC 134

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  ++NRA+EF+ +M    L PN  T+  +++G  + G L  A      M + G  P+I 
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LI+GHC  G + EA+ L  +M    + PDV +Y+ +I G     +L+ A  +  +M
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             + +L + VTY+SLI G C++  + +A  +  +M    + P+  T+++LI+  CK G++
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ L+ EM+ K  +PD V +  LI+GL+K    KE  RL  ++      PS  T ++L
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374

Query: 441 IH---------------GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           I                G    G +  A   F    +K       PN  +Y  II   C 
Sbjct: 375 IENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNH----KPNEAIYNVIIHGHCR 430

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +LKA KL+ +M   +  P   T   +++ L       ++  ++ D+++   + DA +
Sbjct: 431 IGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAEL 490

Query: 546 NQVMVRGYQENGDLKSAFR-CSEFLKESRIGSSET 579
           ++V+V   Q+ G++   F   +E  K+  I S+ T
Sbjct: 491 SKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 219/442 (49%), Gaps = 19/442 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L  F EM   G  P VV Y  +I G C   +  EA    RSM   G+ PNL T+N +++
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C+   +    E   EM      P+ VT+  L++G CK G    A      M + G+ P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+  CKAGNL  AM    +M    + P+  TY  +I G    G L+ A  +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M + G + ++VTYN+LI+G+C  G ME+A+ +   M  KGV P+VV++S++I G  + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  +  EM+ KS++PD V +++LI GL +   + E   +++EML  K+ P  FT 
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI+   K G ++ AL+   E   K   G+  P+ V Y  +I  L    +  +A +L  
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQK---GFL-PDAVTYNVLINGLNKQARSKEARRLLL 357

Query: 498 DMRSDNLRPDNCTYTTML---------------RGLLRAKRMLDVMMLLADMIKMGIVPD 542
            +  D+  P   TY T++               +G      M +   +   MI     P+
Sbjct: 358 KLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPN 417

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
             I  V++ G+   G++  A++
Sbjct: 418 EAIYNVIIHGHCRIGNVLKAYK 439



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 214/441 (48%), Gaps = 53/441 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  + + G+  +AL ++ ++    + P +    +L+N + K G  +   EF+++M
Sbjct: 90  TYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM 149

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + GL  +  TY  +I+    QG + +A  + +EM   G  P++V Y  LI+G C   +M
Sbjct: 150 HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRM 209

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M   GV+P++ +Y+ ++ G+ +  +++RA +   EM+  ++ P+ VT+  L
Sbjct: 210 EEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSL 269

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC+   L  A + F  M    + P+ F Y  LI+ +CK G+L +A+ L  EM +   
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID------------- 337
            PD  TYN+LI GL    + + A  LL K++ +  + + VTYN+LI+             
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVAL 389

Query: 338 --GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
             G+C +G M++A  V   M  K  +PN   ++ +I G C+ GN+  A  LY EMV    
Sbjct: 390 VKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDF 449

Query: 396 VPDVVVFTALIDGL-----------------------------------SKDGNMKETLR 420
           VP  V   AL+  L                                    K+GNM     
Sbjct: 450 VPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFN 509

Query: 421 LYKEMLEAKITPSVFTVSSLI 441
           L  EM +  + PS  T ++ I
Sbjct: 510 LLTEMAKDGLIPSTGTPTNAI 530



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 28/357 (7%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNG 93
           +  LN +    F PS+  ++ LI     +G +EEA+ + + +    VLP + + + +++G
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             +  + D  ++   EM+   ++ D VTY  LI   C Q  + +A ++F EM+   + P 
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
              YT LI+  C E  + +A  +   M + G +P+  TYN L++G  K A    A     
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357

Query: 214 EMLHHNLQPNVVTFGVLMD---------------GLCKVGELRAAGNFFVHMAKFGVFPN 258
           ++ + +  P+ VT+  L++               G C  G +  A   F  M      PN
Sbjct: 358 KLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPN 417

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
             +YN +I GHC+ GN+ +A  L  EM   +  P   T   L+K L      EG +G L 
Sbjct: 418 EAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALF----TEGMDGELN 473

Query: 319 KMYKEGI----LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           ++  + +    L +      L++   KEG+M+   ++ ++M + G+ P+  T ++ I
Sbjct: 474 EVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 287/569 (50%), Gaps = 24/569 (4%)

Query: 16  CLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY 75
           C ++D    LL  RK     +  ++              F++++    + G +EEAL + 
Sbjct: 223 CKLRDANRALLVLRKMQDAGFVPWDF------------TFNSVVDVLVKGGRMEEALHI- 269

Query: 76  RKIEVLP-----AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
            K E+L      ++     L++G   + +     + +EE +  GLV   VTY VLI  C 
Sbjct: 270 -KDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCT 328

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
            +G   KA  L  +M D G+ P+   + ++I GL N+    +A S+F+ M + G+ P+ +
Sbjct: 329 EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAF 387

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+   C+   +  AL  + +M    ++P +VT+  L+   C  G +  A   +  M
Sbjct: 388 TYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM 447

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G  PN+  Y  L+ GH       +A +L +EM++  +S + +TYN LI GLC VG++
Sbjct: 448 PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRV 507

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                +L++   EG +   +TYNS+I+G+ K G M  A +V  QM  KG+ PN+VT++S 
Sbjct: 508 CEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSF 567

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           IDG CK    D A+ +  ++  K L PD+  + +LI G  ++GNM   L++   ML+  +
Sbjct: 568 IDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGL 627

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P++   +S I G +KN ++        EK  K        +   Y  +I     DG + 
Sbjct: 628 LPNISVYNSFITG-YKNLKMMEEALRLYEKMIKEG---IDLDTATYTTLIDGFSKDGNVT 683

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A KL+S+M +    PD+ T+T +  GL R   + D   LL +M ++ I P+ ++  +++
Sbjct: 684 FALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLI 743

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSET 579
            GY  NG L+ AFR  + + E +I   +T
Sbjct: 744 NGYLRNGKLQEAFRLHDEMLERKIMPDDT 772



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 213/440 (48%), Gaps = 26/440 (5%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L N KL+K+A  L K++ +    S  P    Y++                   LI    +
Sbjct: 362 LLNDKLWKDAVSLFKEMAD----SGIPDAFTYNI-------------------LIHWLCQ 398

Query: 65  MGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
              I EAL ++ K+    V P I   ++LL      G  D   + Y EM   G   +VVT
Sbjct: 399 RRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVT 458

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+     +    KA  L  EM   G+      Y  LI+GLC   ++ E   M +   
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFE 518

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G VP   TYN++++G+ K   +  A   Y +M    + PN+VT+   +DG CK     
Sbjct: 519 TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      +   G+ P+I  YN LI G C+ GN+  A+ +   M K  + P++  YN  I
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G   +  +E A  L +KM KEGI  +  TY +LIDG+ K+G++  AL + S+M  KG  
Sbjct: 639 TGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ +TF++L  G C+ G+ID A  L  EM    + P+V+++  LI+G  ++G ++E  RL
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758

Query: 422 YKEMLEAKITPSVFTVSSLI 441
           + EMLE KI P   T   L+
Sbjct: 759 HDEMLERKIMPDDTTYDILV 778



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 220/494 (44%), Gaps = 40/494 (8%)

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G   D   + V++  C  +G    A+ LFDEM    IEP   + ++ I  LC   
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNA---------------------------------- 194
               A  + R M++ G VP  +T+N+                                  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 195 -LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            LM GYC   +V +AL+ + E L   L P  VT+ VL+ G  + G    A      M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P+   +N +I G        +A+SL  EM    I PD FTYNILI  LC   ++  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L +KM + G+   +VTY+SL+  YC  G M++A+ + ++M  KG  PNVVT+++L+ G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
                  D A  L  EM    +  +   +  LI+GL   G + E   + K        P+
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T +S+I+G  K G + +A   + +   K       PN V Y + I   C       A 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKG----IPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K+ +D+R   LRPD   Y +++ G  +   M   + +L  M+K G++P+  +    + GY
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 554 QENGDLKSAFRCSE 567
           +    ++ A R  E
Sbjct: 642 KNLKMMEEALRLYE 655



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 188/417 (45%), Gaps = 11/417 (2%)

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           SM   GV P+  +   L+    + A    AL    EM       +   F V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
               A   F  M    + P+  V +  I   CK  +   A+ +  +M+     P  FT+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            ++  L   G++E A  +  ++   G   +VV   +L+ GYC + ++ KAL +  +    
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P  VT++ LI G  + G  + A  L  +M    L+P    F  +I GL  D   K+ 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L+KEM ++ I P  FT + LIH L +  +I  ALN + EK ++T      P  V Y +
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW-EKMNETG---VKPYIVTYHS 426

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++   C +G + +A KL+++M      P+  TYTT+++G +          LLA+M + G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 539 I-----VPDAVINQVMVRGYQ-ENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
           +       + +IN + V G   E G++   F    F+  +   +S   G      +G
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/430 (34%), Positives = 231/430 (53%), Gaps = 7/430 (1%)

Query: 141 LFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +FDE+    D+    T +I+ +L+   C   K  EA   F  ++E G VPN+ T N ++ 
Sbjct: 130 IFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLS 189

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            + K+     A   Y EM   N++ ++ TF ++++ LCK G+L+ A  F  HM   GV P
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKP 249

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  YN +I GHC  G    A  +   M+   + PD +TYN  I GLC  G+LE A GL+
Sbjct: 250 NVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI 309

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM + G++ N VTYN+LIDGYC +GD++KA +   +M  KG+  ++VT++  I      
Sbjct: 310 CKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFME 369

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +  EM  K ++PD V    LI+G  + G+ K    L  EM+   I P++ T 
Sbjct: 370 GRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTY 429

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI+ L K  R+  A   F     K       P+ +++ A+I   C +G I +A +L  
Sbjct: 430 TSLIYVLGKRNRMKEADALF----SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +  + PD  TY T+++G  R  ++ +   LL +M + GI PD +    ++ GY + G
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545

Query: 558 DLKSAFRCSE 567
           D+K AFR  +
Sbjct: 546 DMKDAFRVRD 555



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 246/468 (52%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  L+ A+ E+    EAL   ++ ++   +P I+ CN +L+  +K  +    W  Y EM
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + + T+ ++I+  C +G + KA      M   G++P VV Y  +IHG C   K 
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F++M++ G+ P+ YTYN+ + G CK   +  A     +ML   L PN VT+  L
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G+L  A  +   M   G+  ++  YN  I      G + +A ++  EM +  +
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  T+NILI G C  G  + A GLL +M  +GI   +VTY SLI    K   M++A +
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S++ ++G+ P+++ F++LIDG C  GNID A  L  EM    ++PD + +  L+ G  
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E  +L  EM    I P   + ++LI G  K G + +A   F  + +    G+  
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDA---FRVRDEMMTTGF-D 563

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+IQ LC + +   A +L  +M S  + PD+ TY +++  +
Sbjct: 564 PTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 167/300 (55%), Gaps = 5/300 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC----NALLNGLIKKGKFDSVWEF 106
           N   ++ LI  +   G +++A + YR   +   I A     N  ++ L  +G+       
Sbjct: 320 NAVTYNALIDGYCNKGDLDKA-YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM 378

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   G++ D VT+ +LI+  C  GD  +A  L DEM+ KGI+PT+V YT LI+ L  
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            N+M EA+++F  +++ G++P++  +NAL+DG+C   +++RA +   EM +  + P+ +T
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  LM G C+ G++  A      M + G+ P+   YN LI G+ K G++ +A  +  EM 
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                P + TYN LI+GLC   + E AE LL++M  +GI  +  TY S+I+      D+E
Sbjct: 559 TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 187/383 (48%), Gaps = 4/383 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           ++ L+  YC++   N ALE ++ +      PN+ T   ++    K+   + A   +  M 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +  +  +++ +N +I+  CK G L +A      ME   + P+V TYN +I G C  G+ +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  + Q M  +G+  +  TYNS I G CKEG +E+A  +  +M E G+ PN VT+++LI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG C  G++D A     EM+ K ++  +V +   I  L  +G M +   + KEM E  + 
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P   T + LI+G  + G    A        D+  G    P  V Y ++I  L    ++ +
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLL----DEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  LFS ++ + L PD   +  ++ G      +     LL +M  M ++PD +    +++
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           GY   G ++ A +  + +K   I
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGI 527


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 255/497 (51%), Gaps = 8/497 (1%)

Query: 66  GHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G + EA+ + R++       P   + N ++ G+ + G+     E ++EM    ++ + +T
Sbjct: 174 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 233

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +ID     GD+    +L D+M+  G++P  + Y +L+ GLC   +M E  ++   M 
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 293

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              +VP+ +TY+ L DG  +  D    L  + + L + +     T  +L++GLCK G++ 
Sbjct: 294 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVS 353

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      +   G+ P   +YN LI+G+C+ G L  A S   +M+   I PD  TYN LI
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 413

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC   ++  A+ LL +M   G+   V T+N+LID Y + G +EK   V S+M E G++
Sbjct: 414 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 473

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVV++ S+++  CK G I  A+ +  +M  K ++P+  V+ A+ID   + G   +   L
Sbjct: 474 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 533

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++M    I+PS+ T + LI GL    +IS A     E  +        P+ V Y  +I 
Sbjct: 534 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLIPDAVSYNTLIS 589

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A CY G I KA  L   M    ++    TY  ++ GL  A R++++  L   M++  +VP
Sbjct: 590 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVP 649

Query: 542 DAVINQVMVRGYQENGD 558
              I+ +MV  Y + G+
Sbjct: 650 SNAIHNIMVEAYSKYGN 666



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 249/510 (48%), Gaps = 5/510 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++ +CN LL  L+  G+   V   +  +   G   D   +   +  C   GD+ +A+ 
Sbjct: 122 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 181

Query: 141 LFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +   M  D    P    Y ++I G+    +  +A  +F  M E  V+PN  TYN ++DG+
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D+        +M+ H L+PN +T+ VL+ GLC+ G +         MA   + P+ 
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 301

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F Y+ L DG  + G+    +SL  +  K  ++   +T +IL+ GLC  G++  AE +LQ 
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +   G++   V YN+LI+GYC+ G++E A S   QM  + ++P+ +T+++LI+G CKA  
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I  A  L  EM    + P V  F  LID   + G +++   +  EM E  + P+V +  S
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +++   KNG+I  A+    +   K       PN  +Y AII A    G   +A  L   M
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKD----VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +S+ + P   TY  +++GL    ++ +   ++  +    ++PDAV    ++      G++
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597

Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
             A    + + +  I S+    H   S LG
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLG 627



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 185/343 (53%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C+ LLNGL K GK     E  + +V  GLV   V Y  LI+  C  G++  A + F +M 
Sbjct: 339 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 398

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            + I+P  + Y  LI+GLC   ++  A+ +   M++ GV P + T+N L+D Y +   + 
Sbjct: 399 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 458

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +      EM  + L+PNVV++G +++  CK G++  A      M    V PN  VYN +I
Sbjct: 459 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           D + + G   +A  L  +M+   ISP + TYN+LIKGLC   Q+  AE ++  +    ++
Sbjct: 519 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 578

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            + V+YN+LI   C  G+++KAL +  +M + G++  V T+  LI G   AG +     L
Sbjct: 579 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYL 638

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           Y +M+  ++VP   +   +++  SK GN  +   L KEML+ +
Sbjct: 639 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 19/449 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNE--------NKMVEAESMFRSMRECGVVPNL 189
           AL L  ++ D+   P   + +      CN          +  +    F  +   G  P+ 
Sbjct: 107 ALRLLSDLADEARAPLPSLSS------CNLLLEALLSLGRHADVRRAFGILASAGARPDT 160

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGNFFV 248
           + +N  +       D+  A+     M      P N  ++ V++ G+ + G    A   F 
Sbjct: 161 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 220

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M +  V PN   YN +IDGH K G+L    SL  +M    + P+  TYN+L+ GLC  G
Sbjct: 221 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG 280

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++     LL +M  + ++ +  TY+ L DG  + GD +  LS+  +  + GV     T S
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCS 340

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L++G CK G +  A  +   +V   LVP  V++  LI+G  + G ++     + +M   
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I P   T ++LI+GL K  RI+NA +  +E  D       +P    +  +I A    GQ
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG----VNPTVETFNTLIDAYGRTGQ 456

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + K   + S+M+ + L+P+  +Y +++    +  ++ + + +L DM    ++P+A +   
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++  Y E+G    AF   E +K + I  S
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPS 545



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%)

Query: 69  EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC 128
           EE L       ++P     N L+NG  + G+ +  +  + +M    +  D +TY  LI+ 
Sbjct: 356 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 415

Query: 129 CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            C    +  A +L  EM D G+ PTV  +  LI       ++ +   +   M+E G+ PN
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           + +Y ++++ +CK   +  A+    +M H ++ PN   +  ++D   + G    A     
Sbjct: 476 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 535

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G+ P+I  YN LI G C    + EA  + + +    + PD  +YN LI   C  G
Sbjct: 536 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 595

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            ++ A  L Q+M+K GI + V TY+ LI G    G + +   +  +M +  V P+    +
Sbjct: 596 NIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHN 655

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIK 393
            +++   K GN   A  L  EM+ K
Sbjct: 656 IMVEAYSKYGNEIKAEDLRKEMLQK 680


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/570 (29%), Positives = 278/570 (48%), Gaps = 45/570 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + N  + + L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     
Sbjct: 143 RVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQAD 202

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   +VV Y  +ID    +GDV KA +LF EM+ +GI P +V Y  ++H
Sbjct: 203 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 262

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M    V+PN +TYN L+ GY        A+  + EM  H++ P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLF 276
           +VVT  +LM  LCK G+++ A + F  MA  G  P++F YN +++G+   G      +LF
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382

Query: 277 E-----------------------------AMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           +                             AM + +EM    + PDV TY  +I  LC +
Sbjct: 383 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A     +M  +G+  +   YN LI G+C  G + KA  + S++   G+  ++V F
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SS+I+  CK G +  A  ++   V   L PD VV++ L+DG    G M++ LR++  M+ 
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+V    +L++G  K GRI   L+ F E   +       P+ +LY+ II  L   G
Sbjct: 563 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG----IKPSTILYSIIIDGLFQAG 618

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  D CTY  +LRGL + +   + + L  ++  M +  + +   
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            M+ G  +   ++ A      +  SR+  S
Sbjct: 679 TMIDGMFQTRRVEEAKDLFASISRSRLVPS 708



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 257/512 (50%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVVT  +L+   C  G + +A ++FD M  KG  P V  Y I+++G   +  +
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 375

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P+ YT+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 376 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + YNCLI G C  G+L +A  L SE+    +
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  ++ +I  LC +G++  A+ +       G+  + V Y+ L+DGYC  G MEKAL 
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 555

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPNVV + +L++G CK G ID  + L+ EM+ + + P  ++++ +IDGL 
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I   + T + ++ GLFKN                       
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR---------------------- 653

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ +  T  TM+ G+ + +R+ +   L
Sbjct: 654 -------------CFDEAIF----LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + +  +VP  V   +M+    + G ++ A
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEA 728



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 240/510 (47%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 172

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y+IL+  LC++ K  +A+ + R M E G V  PN+  YN ++DG+ K 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 232

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P++VT+  ++  LCK   +  A  F   M    V PN + Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 292

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G+   G   EA+ +  EM +  I PDV T ++L+  LC  G+++ A  +   M  
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 323 EGILANVVTYNSLIDGYCKEG---DM--------------------------------EK 347
           +G   +V +YN +++GY  +G   DM                                +K
Sbjct: 353 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 412

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + + PD   +  LI 
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 472

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +   SS+I+ L K GR+ +A N F    D T   
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF----DLTVNV 528

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V+Y+ ++   C  G++ KA ++F  M S  + P+   Y T++ G  +  R+ + 
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  + G
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAG 618



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  NI + N L++G C+A    EA+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+Y+IL+K LC  G+   A+ LL+ M + G +   NVV YN++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  +  +M ++G+ P++VT++S++   CKA  +D A     +MV K ++
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   +  LI G S  G  KE +R++KEM    I P V T+S L+  L K G+I  A + 
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P+   +  +I+A   
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++PD  TY T++  L R  +M D M     MI  G+ PD   
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 467 YNCLIQGFCTHGSLLKA 483



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  ++++   L++G  +     E L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +    +     G  CSPN V Y  
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPNVVAYNT 224

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY +++  L +A+ M      L  M+   
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++P+      ++ GY   G  K A R  + ++   I
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 268/514 (52%), Gaps = 9/514 (1%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI +   +G +E A  VY++I    V   +   N ++N L K GK + V  F  ++  
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  D+VTY  LI     +G + +A  L + M  KG  P V  Y  +I+GLC   K   
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A+ +F  M   G+ P+  TY +L+   CK  DV    + + +M   ++ P++V F  +M 
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
              + G L  A  +F  + + G+ P+  +Y  LI G+C+ G +  AM+L +EM +   + 
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV TYN ++ GLC    L  A+ L  +M +  +  +  T   LIDG+CK G+++ A+ + 
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M EK +  +VVT+++L+DG  K G+ID A  ++ +MV K ++P  + ++ L++ L   
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G++ E  R++ EM+   I P+V   +S+I G  ++G  S+  + FLEK      G+  P+
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES-FLEKM--ISEGFV-PD 619

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDN--LRPDNCTYTTMLRGLLRAKRMLDVMML 530
            + Y  +I     +  + KA  L   M  +   L PD  TY ++L G  R  +M +  ++
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  MI+ G+ PD      M+ G+    +L  AFR
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 207/387 (53%), Gaps = 5/387 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + + +L++   + G + E   V+   R  +V+P +   +++++   + G  D    ++
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +   GL+ D V Y +LI   C +G +  A+NL +EM+ +G    VV Y  ++HGLC  
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA+ +F  M E  + P+ YT   L+DG+CK+ ++  A+E + +M    ++ +VVT+
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  KVG++  A   +  M    + P    Y+ L++  C  G+L EA  +  EM  
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P V   N +IKG C  G     E  L+KM  EG + + ++YN+LI G+ +E +M K
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638

Query: 348 ALSVCSQMTEK--GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           A  +  +M E+  G+ P+V T++S++ G C+   +  A  +  +M+ + + PD   +T +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITP 432
           I+G     N+ E  R++ EML+   +P
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 251/528 (47%), Gaps = 42/528 (7%)

Query: 51  NPSVFSTLIIAF---SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N SVF  LI  +    ++    EA  + R      +I ACNAL+  L++ G  +  W  Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E+   G+  +V T                 LN                  I+++ LC +
Sbjct: 224 QEISRSGVGINVYT-----------------LN------------------IMVNALCKD 248

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM +  +    ++E GV P++ TYN L+  Y     +  A E  + M      P V T+
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GLCK G+   A   F  M + G+ P+   Y  L+   CK G++ E   + S+M  
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++ PD+  ++ ++      G L+ A      + + G++ + V Y  LI GYC++G +  
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+++ ++M ++G   +VVT+++++ G CK   +  A  L+ EM  ++L PD    T LID
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K GN++  + L+++M E +I   V T ++L+ G  K G I  A   + +   K    
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE--- 545

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  + Y+ ++ ALC  G + +A +++ +M S N++P      +M++G  R+    D 
Sbjct: 546 -ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
              L  MI  G VPD +    ++ G+    ++  AF   + ++E + G
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 203/423 (47%), Gaps = 24/423 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           T +  + +IH L    ++ +A+S + R +R  GV   L   N+L   +            
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV-SRLEIVNSLDSTFS----------- 159

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
                  N   N   F +L+    +  +LR A   F  +   G   +I   N LI    +
Sbjct: 160 -------NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR 212

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  +  E+ +  +  +V+T NI++  LC  G++E     L ++ ++G+  ++VT
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI  Y  +G ME+A  + + M  KG  P V T++++I+G CK G  + A  ++ EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L PD   + +L+    K G++ ET +++ +M    + P +   SS++    ++G + 
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL +F    +        P++V+Y  +IQ  C  G I  A  L ++M       D  TY
Sbjct: 393 KALMYF----NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            T+L GL + K + +   L  +M +  + PD+    +++ G+ + G+L++A    + +KE
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508

Query: 572 SRI 574
            RI
Sbjct: 509 KRI 511



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 172/349 (49%), Gaps = 40/349 (11%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+++  F+  G++++AL  +  ++   ++P       L+ G  +KG          EM+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DVVTY  ++   C +  + +A  LF+EM ++ + P     TILI G C    + 
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +F+ M+E  +  ++ TYN L+DG+ KV D++ A E + +M+   + P  +++ +L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN----------------- 274
           + LC  G L  A   +  M    + P + + N +I G+C++GN                 
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617

Query: 275 ------------------LFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAE 314
                             + +A  L  +ME+ +  + PDVFTYN ++ G C   Q++ AE
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            +L+KM + G+  +  TY  +I+G+  + ++ +A  +  +M ++G  P+
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 249/473 (52%), Gaps = 4/473 (0%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           I   P I     +L  L+K   + +    + EM   G+ +D+VT+ +LI+C    G    
Sbjct: 50  INPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHF 109

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           + ++F  ++ KG EP  +  T LI GLC + ++ +A      +   G   N   Y  L++
Sbjct: 110 SFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLIN 169

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CKV   + AL+    +    +QPNVV +  ++D +CKV  +  A + +  M   G+ P
Sbjct: 170 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 229

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y+ LI G C  G L +A+ L ++M   EI+PDV+T++IL+ G C  G+++ A+ +L
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K+GI  +VVTY SL+DGYC    + KA S+ + M + GV  NV +++ +I+G CK 
Sbjct: 290 AMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKI 349

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D AM L+ EM  K+++PDVV + +LIDGL K G +   L+L  EM +  +     T 
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S++  L KN ++  A+    +  D+       P+   Y  +I  LC  G++  A  +F 
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEG----IQPDMYTYTILIDGLCKGGRLKDAQNIFE 465

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           D+          TYT M++G          + LL+ M   G +P+A   ++++
Sbjct: 466 DLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 244/454 (53%), Gaps = 7/454 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI  FS++GH   +  V+  I      P       L+ GL  KG+      F++++
Sbjct: 93  TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + V YG LI+  C  G    AL L   +  K ++P VV+Y  +I  +C    +
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  ++  M   G+ P++ TY+AL+ G+C +  +N A+  +++M+   + P+V TF +L
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG CK G ++ A N    M K G+ P++  Y  L+DG+C    + +A S+ + M +  +
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + +V +YNI+I G C + +++ A  L ++M+ + I+ +VVTYNSLIDG CK G +  AL 
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++GV  + +T++S++D  CK   +D A+ L T+M  + + PD+  +T LIDGL 
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G +K+   +++++L      +V+T + +I G   N     AL        K +   C 
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALL----SKMEDNGCI 508

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           PN   Y  II +L    +   A KL  +M +  L
Sbjct: 509 PNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 201/380 (52%), Gaps = 3/380 (0%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   + TLI    ++G    AL + R+++   V P +   N +++ + K    +  ++ 
Sbjct: 159 LNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 218

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EMV  G+  DVVTY  LI   C  G +  A+ LF++MI + I P V  ++IL+ G C 
Sbjct: 219 YSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E ++ EA+++   M + G+ P++ TY +LMDGYC V  VN+A   ++ M    +  NV +
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + ++++G CK+ ++  A N F  M    + P++  YN LIDG CK+G +  A+ L  EM 
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +  D  TYN ++  LC   Q++ A  LL KM  EGI  ++ TY  LIDG CK G ++
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A ++   +  KG    V T++ +I G C     D A+ L ++M     +P+   +  +I
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518

Query: 407 DGLSKDGNMKETLRLYKEML 426
             L +        +L +EM+
Sbjct: 519 LSLFEKDENDMAEKLLREMI 538



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 222/460 (48%), Gaps = 39/460 (8%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           Q D    ++ F+ +++    P +  +  ++  L   N    A S+ R M   G+  +L T
Sbjct: 34  QDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVT 93

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++ + ++   + +   +  +L    +PN +T   L+ GLC  G++  A +F   + 
Sbjct: 94  FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G   N   Y  LI+G CK G    A+ L   ++   + P+V  YN +I  +C V  + 
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 213

Query: 312 GAEGLLQKMYKEGILANVVTYNSLI----------------------------------- 336
            A  L  +M  +GI  +VVTY++LI                                   
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+CKEG +++A +V + M ++G++P+VVT+ SL+DG C    ++ A  ++  M    + 
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVT 333

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            +V  +  +I+G  K   + E + L+KEM    I P V T +SLI GL K+G+IS AL  
Sbjct: 334 ANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKL 393

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
             E  D+        + + Y +I+ ALC + Q+ KA  L + M+ + ++PD  TYT ++ 
Sbjct: 394 VDEMHDRG----VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           GL +  R+ D   +  D++  G         VM++G+ +N
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 262/492 (53%), Gaps = 8/492 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP +   +   + + +  +F+ V +F +++ L G+  ++ T  ++I+C C       A +
Sbjct: 85  LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G EP    +  LI+GLC E K+ +A  +   M E G  P++ TYN++++G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGIC 204

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  D + A +   +M   N++ +V T+  ++D LC+ G + AA + F  M   G+  ++ 
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G CKAG   +   L  +M   EI P+V T+N+L+      G+L+ A  L ++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              GI  N++TYN+L+DGYC +  + +A ++   M      P++VTF+SLI G C    +
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D  M ++  +  + LV + V ++ L+ G  + G +K    L++EM+   + P V T   L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 441 IHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + GL  NG++  AL  F  L+K+ K D G      V+Y  II+ +C  G++  A  LF  
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKS-KMDLGI-----VMYTTIIEGMCKGGKVEDAWNLFCS 498

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    ++P+  TYT M+ GL +   + +  +LL  M + G  P+      ++R +  +GD
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558

Query: 559 LKSAFRCSEFLK 570
           L ++ +  E +K
Sbjct: 559 LTASAKLIEEMK 570



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 240/450 (53%), Gaps = 7/450 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+NGL  +GK        + MV  G   D+VTY  +++  C  GD   A ++
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M ++ ++  V  Y+ +I  LC +  +  A S+F+ M   G+  ++ TYN+L+ G CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N       +M+   + PNV+TF VL+D   K G+L+ A   +  M   G+ PNI  
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+C    L EA ++   M + + SPD+ T+  LIKG C V +++    + + + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G++AN VTY+ L+ G+C+ G ++ A  +  +M   GV P+V+T+  L+DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ ++ ++    +   +V++T +I+G+ K G +++   L+  +    + P+V T + +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G +S A N  L K ++ DG   +PN   Y  +I+A   DG +  ++KL  +M+S
Sbjct: 516 SGLCKKGSLSEA-NILLRKMEE-DGN--APNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 502 DNLRPDNCTYTTMLRGLLRA---KRMLDVM 528
                D  +   ++  LL     K  LD++
Sbjct: 572 CGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 219/412 (53%), Gaps = 3/412 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TLI      G + +A+  V R +E    P +   N+++NG+ + G     ++  
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M    + ADV TY  +ID  C  G +  A++LF EM  KGI+ +VV Y  L+ GLC  
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  +   + + M    +VPN+ T+N L+D + K   +  A E Y EM+   + PN++T+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LMDG C    L  A N    M +    P+I  +  LI G+C    + + M +   + K
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  +  TY+IL++G C  G+++ AE L Q+M   G+L +V+TY  L+DG C  G +EK
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +   + +  ++  +V ++++I+G CK G ++ A  L+  +  K + P+V+ +T +I 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           GL K G++ E   L ++M E    P+  T ++LI    ++G ++ +     E
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 216/403 (53%), Gaps = 4/403 (0%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F+ M     +P L  ++       +    N  L+F  ++  + +  N+ T  +++
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +   A +    + K G  P+   +N LI+G C  G + +A+ L   M +    
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TYN ++ G+C  G    A  +L+KM +  + A+V TY+++ID  C++G ++ A+S+
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  KG++ +VVT++SL+ G CKAG  +    L  +MV + +VP+V+ F  L+D   K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G ++E   LYKEM+   I+P++ T ++L+ G     R+S A N      D      CSP
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSP 366

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V + ++I+  C   ++    K+F ++    L  +  TY+ +++G  ++ ++     L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M+  G++PD +   +++ G  +NG L+ A    E L++S++
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EMI     P +V ++     +    +        + +   G+  N+YT N +++
Sbjct: 72  AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+      A     +++    +P+  TF  L++GLC  G++  A      M + G  P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP 191

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN +++G C++G+   A  +  +ME+  +  DVFTY+ +I  LC  G ++ A  L 
Sbjct: 192 DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +GI ++VVTYNSL+ G CK G       +   M  + + PNV+TF+ L+D   K 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  LY EM+ + + P+++ +  L+DG      + E   +   M+  K +P + T 
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G     R+ + +  F   + +        N V Y+ ++Q  C  G+I  A +LF 
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRG----LVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + PD  TY  +L GL    ++   + +  D+ K  +    V+   ++ G  + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 558 DLKSAF 563
            ++ A+
Sbjct: 488 KVEDAW 493



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 4/197 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM+    +P +V F+     +++       L   K++    I  +++T++ +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  +   A +  L K  K   GY  P+   +  +I  LC +G++ KA  L   M 
Sbjct: 130 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +  +PD  TY +++ G+ R+        +L  M +  +  D      ++     +G + 
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 561 SAFRCSEFLKESRIGSS 577
           +A    + ++   I SS
Sbjct: 246 AAISLFKEMETKGIKSS 262


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 245/470 (52%), Gaps = 7/470 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI +  +M   +EA    +  ++  VLP I+ CN+LL+  +K  + ++ W  Y EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + V T+ ++I+  C +G + KA +    M   G++P +V Y  ++HG C+  ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+++  +M+   + P+ +TY +L+ G CK   +  A + + EM+   L+P+ V +  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G L  A  +   M K G+ P +  YN LI          EA  +  E+++  I
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPD  TYNILI G C     + A  L  +M   GI     TY SL+    K+  M++A  
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++T +GV P+V+ F++LIDG C   N+  A  L  +M    + PD V F  ++ G  
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E   L+ EM    I P   + ++LI G  + G I +A   F  + +  D G+ +
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA---FRVRNEMLDTGF-N 568

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           P  + Y A++Q LC + +   A +L  +M S  + PD+ TY T++ G+ +
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 230/410 (56%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++  LI   C+ N+  EA   F +M+E GV+P + T N+L+  + K+     A   Y E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++ +V TF ++++ LCK G+L+ A +F  HM   GV PNI  YN ++ G+C +G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A ++ + M++ +I PD FTY  LI G+C  G+LE A  + ++M ++G+  + V YN+
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+C +G+++ A +   +M +KG+ P + T++SLI         D A  +  E+  K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PD + +  LI+G  +  N K+   L+ EML + I P+  T +SL+H L K  R+  A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F + T  ++G    P+ +++ A+I   C +  +  A +L  DM    + PD  T+ T+
Sbjct: 452 DLFKKIT--SEG--VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           ++G  R  ++ +   L  +M + GI PD +    ++ GY   GD+K AFR
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 207/366 (56%), Gaps = 3/366 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++T++  +   G +E A   L   ++ ++ P      +L++G+ K+G+ +   +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEMV  GL    V Y  LID  C +G++  A    DEM+ KGI PT+  Y  LIH L 
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E +  EAE M + ++E G+ P+  TYN L++GYC+ A+  +A   + EML   ++P   
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+  L K   ++ A + F  +   GV P++ ++N LIDGHC   N+  A  L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++ ++ PD  T+N +++G C  G++E A  L  +M + GI  + +++N+LI GY + GD+
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  V ++M + G  P V+T+++L+ G CK    D A  L  EMV K + PD   +  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 406 IDGLSK 411
           I+G++K
Sbjct: 613 IEGIAK 618



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 173/347 (49%), Gaps = 7/347 (2%)

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           + F  L+   C +     A   F  M + GV P I   N L+    K      A  L +E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  I   V+T+NI+I  LC  G+L+ A+  +  M   G+  N+VTYN+++ GYC  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A ++ + M  + +EP+  T+ SLI G CK G ++ A  ++ EMV K L P  V++  
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG    GN+        EML+  I+P++ T +SLIH LF   R   A     E  +K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SP+ + Y  +I   C      KA  L  +M +  ++P   TYT++L  L +  RM
Sbjct: 392 ----ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +   L   +   G++PD ++   ++ G+  N ++K AF   E LK+
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF---ELLKD 491



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 40/293 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +++TLI  F   G+++ A   Y+    K  + P +   N+L++ L  + + D      +E
Sbjct: 328 IYNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           +   G+  D +TY +LI+  C   +  KA  L DEM+  GI+PT   YT L+H L  +N+
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446

Query: 170 MVEAESMFRSMRECGVVPNLYTYNAL---------------------------------- 195
           M EA+ +F+ +   GV+P++  +NAL                                  
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506

Query: 196 -MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            M G+C+   V  A E + EM    ++P+ ++F  L+ G  + G+++ A      M   G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             P +  YN L+ G CK      A  L  EM    ++PD  TY  LI+G+  V
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
            + +   ++ +++P  +   F+T++      G +EEA  ++ +++   + P   + N L+
Sbjct: 485 AFELLKDMDRMKVPP-DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G  ++G     +    EM+  G    V+TY  L+   C   +   A  L  EM+ KG+ 
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 152 PTVVIYTILIHGLCNEN 168
           P    Y  LI G+   N
Sbjct: 604 PDDTTYFTLIEGIAKVN 620


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 160/541 (29%), Positives = 271/541 (50%), Gaps = 43/541 (7%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           PK N   FSTLI A+ + G++++A  ++  +    V P +   + L++GL K G+ +   
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
                 +  G+  DVV +   +D     GD+ + + ++  M+++GI P VV  +ILI G 
Sbjct: 363 RLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGF 422

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +++EA  +F  + + G  P++ TY+AL+ G+CK  ++      Y +M+    +P+ 
Sbjct: 423 CQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDT 482

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           + + VL++GLCK G +  A  FF      G+ PN+F  N L+D  C+   +  AM +   
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--- 341
           M    I  D  TY ILIKG    G+++ A  L  +M K+    +V+TY +LIDG CK   
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 342 --------------------------------EGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                                           EG +E AL +   + E+G +P+V TF++
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I   C    +D A+ L+ +M  + L P+ + FT LID   ++G M + + ++ +MLE  
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722

Query: 430 ITPSVFTVSSLIHGLFKN-GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
             P++ T S LIHG FK+   + + L  + E  +       +PN V Y+ +I  LC  G 
Sbjct: 723 PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENN----IAPNIVSYSILIDGLCKRGL 778

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +AS  F      +L PD   YT ++RG  +  R+ + MML  +M+   + PD  + + 
Sbjct: 779 MKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERT 838

Query: 549 M 549
           +
Sbjct: 839 L 839



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 277/556 (49%), Gaps = 46/556 (8%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           SV+  ++  F   G +E  L  ++ +        I  CN +L G+  +       +++  
Sbjct: 238 SVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNM 297

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           +V  G   +VVT+  LID  C +G++ KA  LFD M   G+ P +++Y+ILI GL    +
Sbjct: 298 VVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGR 357

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + + + +     + G+  ++  +++ MD Y K+ D+ R ++ Y  ML+  + PNVV+  +
Sbjct: 358 LEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSI 417

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G C+ G +  A   FV + K G  P+I  Y+ LI G CK+GNL +   L  +M K  
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE------- 342
             PD   Y++LI GLC  G +  A     +    G+  NV T N+L+D +C+        
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 343 ----------------------------GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
                                       G +++AL +  QM +K  +P+V+T+ +LIDG 
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK     A + ++  M   ++ PD+ ++  LI+  S++G+++  L L+  ++E    P V
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT +++I       R+ +A+  F + T +       PN + +  +I A C +G++  A  
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQ----LRPNAITFTILIDAFCREGRMDDAML 713

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV-MMLLADMIKMGIVPDAVINQVMVRGY 553
           +FS M  +   P+  TY+ ++ G  +++ M++  + L  +M++  I P+ V   +++ G 
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 554 QENGDLKS---AFRCS 566
            + G +K    AFRC+
Sbjct: 774 CKRGLMKEASCAFRCA 789



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 226/437 (51%), Gaps = 12/437 (2%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGI--EPTVVIYTI--LIHGLCNENKMVEAES 175
           V YG LI+  C +G   K++++F  +  KGI   P VV   +  LI   C E  + +   
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +  +MRE         Y  +M+ +    +V   L F+  ++      +++T   ++ G+ 
Sbjct: 228 LCSAMRE----QPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
              ++  A ++F  + + G  PN+  ++ LID +CK GNL +A  L   M    ++PD+ 
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            Y+ILI GL   G+LE  + LL     +GI  +VV ++S +D Y K GD+ + + +  +M
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             +G+ PNVV+ S LI G C+ G I  A GL+ +++     P ++ ++ALI G  K GN+
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++   LY++M++ +  P     S LI+GL K G + +AL FF +  ++      SPN   
Sbjct: 464 RDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRG----LSPNVFT 519

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
              ++ + C    I+ A K++  M   N++ D  TYT +++G  +  R+ + +ML   M+
Sbjct: 520 LNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML 579

Query: 536 KMGIVPDAVINQVMVRG 552
           K    PD +    ++ G
Sbjct: 580 KKDFKPDVITYCTLIDG 596



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 239/478 (50%), Gaps = 14/478 (2%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGL-VADVVTY---GVLIDCCCGQGDVMKALNLFDEM 145
           L+    +KG FD   + +  + + G+ V+  V Y   G LID  C +  V K    + E+
Sbjct: 173 LIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDK----YGEL 228

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
                E    +Y  +++   N+ ++       +++ + G   ++ T N ++ G     D+
Sbjct: 229 CSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDI 288

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             A ++++ ++    +PNVVTF  L+D  CK G L  A   F  MA  GV P++ VY+ L
Sbjct: 289 GVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSIL 348

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG  KAG L +   L        I  DV  ++  +     +G L     + ++M  EGI
Sbjct: 349 IDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGI 408

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVV+ + LI G+C+ G + +A  +  Q+ + G EP+++T+S+LI G CK+GN+     
Sbjct: 409 SPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFY 468

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           LY +M+ K   PD +V++ LI+GL K G + + LR + + +   ++P+VFT+++L+    
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFC 528

Query: 446 KNGRISNALN-FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           +   I  A+  ++L             + V Y  +I+     G++ +A  LF  M   + 
Sbjct: 529 RLKCIVGAMKVYYLMGMLNIKA-----DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +PD  TY T++ GL + K+    + +   M K  + PD  I  V++  +   G L++A
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAA 641



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 31/380 (8%)

Query: 23  ENLLKSR-KPHHVCYSV------------------FNALNSLEIPKFNPSVFS--TLIIA 61
           E+++K R +P  + YSV                  F A+N       +P+VF+  TL+ +
Sbjct: 471 EDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNR----GLSPNVFTLNTLLDS 526

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQACNA----LLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           F  +  I  A+ VY  + +L  I+A       L+ G  + G+ D     + +M+      
Sbjct: 527 FCRLKCIVGAMKVYYLMGML-NIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKP 585

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DV+TY  LID  C        L +FD M    + P + IY +LI+    E  +  A  +F
Sbjct: 586 DVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLF 645

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             + E G  P+++T+N ++  YC    ++ A++ + +M    L+PN +TF +L+D  C+ 
Sbjct: 646 VHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCRE 705

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA-MSLCSEMEKFEISPDVFT 296
           G +  A   F  M + G  PN+  Y+CLI G+ K+ ++ E+ + L +EM +  I+P++ +
Sbjct: 706 GRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVS 765

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+ILI GLC  G ++ A    +    + +L +V+ Y  LI GYCK G + +A+ +   M 
Sbjct: 766 YSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825

Query: 357 EKGVEPNVVTFSSLIDGQCK 376
              + P+     +L + Q K
Sbjct: 826 LNRLTPDRFLERTLEEYQLK 845



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T +A  DG+C +   N +                V +G L++  C+ G    + + F+H+
Sbjct: 150 TLDAFRDGFCDLDSTNHS----------------VVYGFLIESYCRKGMFDKSVDIFMHV 193

Query: 251 AKFGVF--PNI--FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              G+F  PN+   +   LID HC    + +   LCS M +   S     Y  ++     
Sbjct: 194 CVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFS----VYEFVMNRFMN 249

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G++E      + + + G   +++T N ++ G   + D+  A    + +   G +PNVVT
Sbjct: 250 KGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVT 309

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           FS+LID  CK GN+D A  L+  M    + PD++V++ LIDGL K G +++  RL    L
Sbjct: 310 FSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVAL 369

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +  I   V   SS +    K G +   +  +    ++      SPN V  + +I+  C +
Sbjct: 370 DKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG----ISPNVVSCSILIKGFCQN 425

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G+IL+A  LF  +      P   TY+ ++ G  ++  + D   L  DMIK    PD ++ 
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 547 QVMVRGYQENGDLKSAFR 564
            V++ G  + G +  A R
Sbjct: 486 SVLINGLCKQGLVGDALR 503


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/548 (29%), Positives = 278/548 (50%), Gaps = 43/548 (7%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYR-KIE--VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   FSTLI  + +   ++EA  +Y   IE  ++P +   + L+NGL + GK +   
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +   +  G+  DVV +  ++D     GD+ KA+ ++  M+ +GI P VV Y+ILI+GL
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +++EA  +F  + + G+ P++ TY++L+DG+CK  ++      Y  ML     P+V
Sbjct: 391 CRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V   +L++GL + G +  A  FF    K G+  N +++N LIDG  +     + + +   
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--- 341
           M  +++ PDV TY +L+KGL   G+L+ A  L  ++ K+G   + + Y +LIDG+CK   
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 342 --------------------------------EGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                                           EG +E  L +  ++ + G+EP++VT+++
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G C       A+ L+  +      P+ + FT LID   KDG M + + ++  MLE  
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P++ T S LI G FK     +A   +    +K  G   SPN V Y+ +I  LC  G +
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELY----EKMLGDRVSPNIVSYSILIDGLCKKGLM 746

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +AS  F      +L PD   Y  ++RG  +  R+ + MML   M+  GI+PD ++ + +
Sbjct: 747 EEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806

Query: 550 VR-GYQEN 556
              G+Q++
Sbjct: 807 AEYGFQDS 814



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 270/524 (51%), Gaps = 7/524 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  +  +F + G +E+ L  +R +    ++P I  CN +L GL    +     +F++ M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   ++VT+  LI+  C +  + +A +L++ MI+KGI P +VIY+ILI+GL    K+
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E  S+F      GV  ++  ++++MD Y +V D+ +A+E Y  ML   + PNVVT+ +L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLC+ G +  A   F  + K G+ P++  Y+ LIDG CK+ NL +   L   M +   
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV   ++LI GL   G ++ A     +  K G+  N   +N+LIDG  +       L 
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M    V P+VVT++ L+ G  + G +D A+ L+ +++ K   PD +++  LIDG  
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  +    L+++K M    I P +   + LI+  F+ G + N L    E           
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG----LE 622

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  +I   C      KA KLF  ++    +P+  T+T ++    +  RM D M++
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            + M++ G  P+ +    ++ GY +  + +SAF   E +   R+
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRV 726



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 275/584 (47%), Gaps = 36/584 (6%)

Query: 13  NARCLIKDVTENLLK--SRKPHHVCYSVFNA--LNSLEIPKFNPSVFSTLIIAFSEMGHI 68
           N RC     +  ++   ++  HH  +S FN+  L +L+     P VF       S +   
Sbjct: 17  NFRCSYSSFSVTVVHQIAKAFHHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFF 76

Query: 69  EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV--------- 119
           E   W    + +   +Q+   + + L++   FD     ++ MV  G   ++         
Sbjct: 77  E---WAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMV--GQFGNLEVLGEFHGS 131

Query: 120 ---------VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                      Y  L+ C C  G V +A++ F  M   G+  +    + ++  L + +++
Sbjct: 132 FRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRI 191

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                 +  M        L  Y  + + + K  +V + L F+  ++   L P +V    +
Sbjct: 192 DVILENYEEM-----CKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKI 246

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   ++  A +FF  M + G  PN+  ++ LI+ +CK   L EA SL + M +  I
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+  Y+ILI GL   G+LE    L       G+  +VV ++S++D Y + GD+ KA+ 
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIE 366

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V ++M ++G+ PNVVT+S LI+G C+ G +  A G++ +++ + L P V+ +++LIDG  
Sbjct: 367 VYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFC 426

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  N+++   LY  ML     P V   S LI+GL + G +  AL FF +   +      +
Sbjct: 427 KSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG----LT 482

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N+ L+ A+I       +     K++  M    + PD  TYT +++GL    R+ + + L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              ++K G  PD +I   ++ G+ +  D  +  +  + ++ + I
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 7/407 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           PSV  +S+LI  F +  ++ +   +Y    RK  V P +  C+ L+NGL ++G  D    
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALR 471

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+ + V  GL  +   +  LID C         L ++  M    + P VV YT+L+ GL 
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ EA ++F  + + G  P+   Y  L+DG+CK  D    L+ +  M  + + P++ 
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            + VL++   + G +         + K+G+ P+I  YN +I G+C      +A+ L   +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +     P+  T+ ILI   C  G+++ A  +   M + G   N++TY+ LIDGY K  + 
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A  +  +M    V PN+V++S LIDG CK G ++ A   +   + + L+PDV+ +  L
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGIL 771

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           I G  K G + E + LY  ML   I P      +L    F++ +  N
Sbjct: 772 IRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAKN 818


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 264/513 (51%), Gaps = 7/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+I  S +G     +  Y ++    V P +   NA++N L K G         +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  TY  +I   C + D+  AL +F++M  +G EP  V Y+ LI+GLC+  ++
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M   G++P  +T    +   C +     A   + +M +   +PNV T+  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L+ A   F  M++ GVFPN   YN LI+   +   +  A  + + M +   
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TYN +IKG C +G  + A  ++  M + G  AN+VTYN++I GYC  G+   AL 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M + G +P+  +++ LI G CK   +++A GL+ EMV   L P+ V +TALIDG  
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           KD  +     L + M  +   P+V T + LIHGL K    S A    L K    +G +  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE--LCKVMIEEGIF-- 597

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y A+I  LC +G    A ++F+ M      P+  TY++++R L +  ++ +   L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            A++ + G++PD +    M+  Y  +G ++ AF
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 247/504 (49%), Gaps = 17/504 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+       ++ AL V+ ++      P     + L+NGL   G+ +  ++   EM
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G++    T    I   C  G    A  LF +M +KG EP V  YT LI GLC    +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M   GV PN  TYNAL++   +   +  A    + M  +   PN+VT+  +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C +G+ + A     +M + G   N+  YN +I G+C +GN   A+ +   M     
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD ++Y  LI G C + ++E A GL  +M  +G+  N VTY +LIDGYCK+  ++ A S
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G  PNV T++ LI G  K  N   A  L   M+ + + P+VV +TA+IDGL 
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G+    L ++ +M+E    P++ T SSLI  L + G++  A N F E     +     
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE----LERHGLI 667

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y  +I+A    G++  A      M     +P   TY  +++GL           L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE-------YL 720

Query: 531 LADMIKMGIVPDAVINQVMVRGYQ 554
           LAD  ++  +PD V N     GYQ
Sbjct: 721 LADQ-RLAALPDVVPNCSF--GYQ 741



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 196/413 (47%), Gaps = 4/413 (0%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI    ++  M    S    + + G+   L+ Y+AL+    ++      ++ YH ML   
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +QPN++ +  +++ LCK G +  A      + +  + P+ F Y  +I GHC+  +L  A+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + ++M K    P+  TY+ LI GLC  G++  A  L+++M   GIL    T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G  E A  +   M  KG EPNV T+++LI G C +G +  A+GL+  M    + P+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + ALI+ L ++  +K    +   M     +P++ T + +I G    G    A+   L 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM---LV 447

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +    G+ S N V Y  II+  C  G    A ++   MR    +PD  +YT ++ G  
Sbjct: 448 MNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +  +M     L  +M+  G+ P+ V    ++ GY ++  L +A    E +K S
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 190/425 (44%), Gaps = 27/425 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I  + + G+   AL +    R     P   +   L+ G  K  K +S +  +
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV  GL  + VTY  LID  C    +  A +L + M   G  P V  Y +LIHGL  +
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N    AE + + M E G+ PN+ TY A++DG CK    + ALE +++M+     PN++T+
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+  L + G++  A N F  + + G+ P+   Y  +I+ +  +G +  A +    M K
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 288 FEISPDVFTYNILIKGL--------------------CGVG----QLEGAEGLLQKMYKE 323
               P ++TY +LIKGL                    C  G      +    +  K+ + 
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
               +V   N+L+      G   +A  +   M  +G+ P+   ++SL+    +  N+D A
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           MG++  M  +     +  +  LI  L +    KE    ++ ML     P     + LI G
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 444 LFKNG 448
           L ++G
Sbjct: 879 LLRDG 883



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 24/354 (6%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +Q  N L++GL K+  F    E  + M+  G+  +VVTY  +ID  C  G    AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F++MI++G  P ++ Y+ LI  L  E K+ EAE++F  +   G++P+  TY  +++ Y  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL--------------------CKVG--- 238
              V  A  F   M+    QP + T+GVL+ GL                    C  G   
Sbjct: 683 SGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQT 742

Query: 239 -ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            +  A       +A+     ++ V N L+     AG  FEA  L   M    + PD   Y
Sbjct: 743 TDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 802

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N L+  L  V  ++ A G+ + M  +G   ++  Y  LI   C+    ++A      M  
Sbjct: 803 NSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 862

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
           +   P+ V  + LIDG  + G  D  M     M  +  +P   ++T L    SK
Sbjct: 863 RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 264/513 (51%), Gaps = 7/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+I  S +G     +  Y ++    V P +   NA++N L K G         +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  TY  +I   C + D+  AL +F++M  +G EP  V Y+ LI+GLC+  ++
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M   G++P  +T    +   C +     A   + +M +   +PNV T+  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L+ A   F  M++ GVFPN   YN LI+   +   +  A  + + M +   
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TYN +IKG C +G  + A  ++  M + G  AN+VTYN++I GYC  G+   AL 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M + G +P+  +++ LI G CK   +++A GL+ EMV   L P+ V +TALIDG  
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           KD  +     L + M  +   P+V T + LIHGL K    S A    L K    +G +  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE--LCKVMIEEGIF-- 597

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y A+I  LC +G    A ++F+ M      P+  TY++++R L +  ++ +   L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            A++ + G++PD +    M+  Y  +G ++ AF
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 247/504 (49%), Gaps = 17/504 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+       ++ AL V+ ++      P     + L+NGL   G+ +  ++   EM
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G++    T    I   C  G    A  LF +M +KG EP V  YT LI GLC    +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M   GV PN  TYNAL++   +   +  A    + M  +   PN+VT+  +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C +G+ + A     +M + G   N+  YN +I G+C +GN   A+ +   M     
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD ++Y  LI G C + ++E A GL  +M  +G+  N VTY +LIDGYCK+  ++ A S
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G  PNV T++ LI G  K  N   A  L   M+ + + P+VV +TA+IDGL 
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G+    L ++ +M+E    P++ T SSLI  L + G++  A N F E     +     
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE----LERHGLI 667

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y  +I+A    G++  A      M     +P   TY  +++GL           L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE-------YL 720

Query: 531 LADMIKMGIVPDAVINQVMVRGYQ 554
           LAD  ++  +PD V N     GYQ
Sbjct: 721 LADQ-RLAALPDVVPNCSF--GYQ 741



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 249/591 (42%), Gaps = 66/591 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI      G ++ A+ ++ ++    V P     NAL+N L++  +    +   
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G   ++VTY  +I   C  GD  KA+ + + M+ +G    +V Y  +I G C+ 
Sbjct: 414 NLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDS 473

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
                A  +   MR+ G  P+ ++Y  L+ G+CK++ +  A   ++EM+   L PN VT+
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG CK  +L  A +   HM + G  PN+  YN LI G  K  N   A  LC  M +
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P+V TY  +I GLC  G    A  +  KM ++G L N++TY+SLI    +EG +E+
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV--------------IK 393
           A ++ +++   G+ P+ +T+  +I+    +G ++ A      M+              IK
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 394 SL-------------VPDVV--------------------------------VFTALIDG 408
            L             +PDVV                                V  AL+  
Sbjct: 714 GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN 773

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           LS  G   E   L   M+   + P     +SL+  L +   +  A+  F  K   T G  
Sbjct: 774 LSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF--KHMSTQG-- 829

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C  +   Y  +I ALC   +  +A   F +M      PD+     ++ GLLR       M
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             L  M     +P   I  ++ R   +    K    C   +K +   +S T
Sbjct: 890 EFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCITKVKRATCSTSCT 940



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 196/413 (47%), Gaps = 4/413 (0%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI    ++  M    S    + + G+   L+ Y+AL+    ++      ++ YH ML   
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +QPN++ +  +++ LCK G +  A      + +  + P+ F Y  +I GHC+  +L  A+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + ++M K    P+  TY+ LI GLC  G++  A  L+++M   GIL    T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G  E A  +   M  KG EPNV T+++LI G C +G +  A+GL+  M    + P+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + ALI+ L ++  +K    +   M     +P++ T + +I G    G    A+   L 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM---LV 447

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +    G+ S N V Y  II+  C  G    A ++   MR    +PD  +YT ++ G  
Sbjct: 448 MNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +  +M     L  +M+  G+ P+ V    ++ GY ++  L +A    E +K S
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/548 (29%), Positives = 278/548 (50%), Gaps = 43/548 (7%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYR-KIE--VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   FSTLI  + +   ++EA  +Y   IE  ++P +   + L+NGL + GK +   
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +   +  G+  DVV +  ++D     GD+ KA+ ++  M+ +GI P VV Y+ILI+GL
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +++EA  +F  + + G+ P++ TY++L+DG+CK  ++      Y  ML     P+V
Sbjct: 391 CRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V   +L++GL + G +  A  FF    K G+  N +++N LIDG  +     + + +   
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--- 341
           M  +++ PDV TY +L+KGL   G+L+ A  L  ++ K+G   + + Y +LIDG+CK   
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 342 --------------------------------EGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                                           EG +E  L +  ++ + G+EP++VT+++
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G C       A+ L+  +      P+ + FT LID   KDG M + + ++  MLE  
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P++ T S LI G FK     +A   +    +K  G   SPN V Y+ +I  LC  G +
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELY----EKMLGDRVSPNIVSYSILIDGLCKKGLM 746

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +AS  F      +L PD   Y  ++RG  +  R+ + MML   M+  GI+PD ++ + +
Sbjct: 747 EEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806

Query: 550 VR-GYQEN 556
              G+Q++
Sbjct: 807 AEYGFQDS 814



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 270/524 (51%), Gaps = 7/524 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  +  +F + G +E+ L  +R +    ++P I  CN +L GL    +     +F++ M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   ++VT+  LI+  C +  + +A +L++ MI+KGI P +VIY+ILI+GL    K+
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E  S+F      GV  ++  ++++MD Y +V D+ +A+E Y  ML   + PNVVT+ +L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLC+ G +  A   F  + K G+ P++  Y+ LIDG CK+ NL +   L   M +   
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV   ++LI GL   G ++ A     +  K G+  N   +N+LIDG  +       L 
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M    V P+VVT++ L+ G  + G +D A+ L+ +++ K   PD +++  LIDG  
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  +    L+++K M    I P +   + LI+  F+ G + N L    E           
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG----LE 622

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  +I   C      KA KLF  ++    +P+  T+T ++    +  RM D M++
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            + M++ G  P+ +    ++ GY +  + +SAF   E +   R+
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRV 726



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 267/563 (47%), Gaps = 34/563 (6%)

Query: 32  HHVCYSVFNA--LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA 89
           HH  +S FN+  L +L+     P VF       S +   E   W    + +   +Q+   
Sbjct: 38  HHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFFE---WAENFLGLCHPVQSFCG 94

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADV------------------VTYGVLIDCCCG 131
           + + L++   FD     ++ MV  G   ++                    Y  L+ C C 
Sbjct: 95  IAHVLLRHRMFDPATRVFDRMV--GQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCR 152

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G V +A++ F  M   G+  +    + ++  L + +++      +  M        L  
Sbjct: 153 NGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGV 207

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  + + + K  +V + L F+  ++   L P +V    ++ GLC   ++  A +FF  M 
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G  PN+  ++ LI+ +CK   L EA SL + M +  I PD+  Y+ILI GL   G+LE
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
               L       G+  +VV ++S++D Y + GD+ KA+ V ++M ++G+ PNVVT+S LI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C+ G +  A G++ +++ + L P V+ +++LIDG  K  N+++   LY  ML     
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P V   S LI+GL + G +  AL FF +   +      + N+ L+ A+I       +   
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG----LTLNNYLFNALIDGCFRLKRTRD 503

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             K++  M    + PD  TYT +++GL    R+ + + L   ++K G  PD +I   ++ 
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           G+ +  D  +  +  + ++ + I
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGI 586



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 202/406 (49%), Gaps = 7/406 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           PSV  +S+LI  F +  ++ +   +Y    RK  V P +  C+ L+NGL ++G  D    
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALR 471

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+ + V  GL  +   +  LID C         L ++  M    + P VV YT+L+ GL 
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ EA ++F  + + G  P+   Y  L+DG+CK  D    L+ +  M  + + P++ 
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            + VL++   + G +         + K+G+ P+I  YN +I G+C      +A+ L   +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +     P+  T+ ILI   C  G+++ A  +   M + G   N++TY+ LIDGY K  + 
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A  +  +M    V PN+V++S LIDG CK G ++ A   +   + + L+PDV+ +  L
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGIL 771

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           I G  K G + E + LY  ML   I P      +L    F++ + S
Sbjct: 772 IRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAS 817


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/521 (32%), Positives = 260/521 (49%), Gaps = 8/521 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    + G ++EA     K+   +V P++   +  +NGLIK  K D      
Sbjct: 290 NVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVL 349

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   G V + V Y  LID  C  G++ +AL + D+M+ KGI P  V    LI G C  
Sbjct: 350 KEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKS 409

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++ +AE++   M   G+  N  +++ +++  C       AL F  EML  NL+PN    
Sbjct: 410 DQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLL 469

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLCK G+   A   +  +   G  PNI   N LI G CKAGN+ E + L  +M +
Sbjct: 470 TTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLE 529

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D  TYN LI G C  G+++    L ++M K+GI  ++ T+N L+ G C    +++
Sbjct: 530 RGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +  + G  PNV T+  +IDG CKA  ++    L  E+V K L  + VV+ +LI 
Sbjct: 590 ASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIR 649

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
               +GNM    RL  +M    +  S  T SSL+HGL   G + +A +      D+    
Sbjct: 650 AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLL----DEMRKE 705

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y  II      GQ+ K + +  +M S N+ P+  TYT M+ G  +  +  + 
Sbjct: 706 GLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEA 765

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSE 567
             LL +M + GI+PDAV       G  + G ++ AF+ C E
Sbjct: 766 AKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDE 806



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 243/457 (53%), Gaps = 4/457 (0%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL   + T   L+       ++ K+  ++D +   GI P V +++ +I+  C  ++  +A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M + GV PN+ TYN ++ G CK   ++ A  F  +M+   + P+++T+ V ++G
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L K+ ++  A      M++ G  PN  VYN LIDG+CK GN+ EA+ +  +M    ISP+
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T N LI+G C   Q+  AE +L++M   G+  N  +++ +I+  C +     AL    
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIR 455

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  + + PN    ++L+ G CKAG    A+ L+  ++ K  VP++V   ALI GL K G
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           NM+ETL+L ++MLE  +     T ++LI G  K G++        E   K       P+ 
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG----IQPDI 571

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             +  ++  LC   +I +AS+L+ + + +   P+  TY  M+ G  +A ++ +   LL +
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++   +  ++V+   ++R Y  NG++ +AFR  + +K
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 194/361 (53%), Gaps = 3/361 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  + +TL+    + G   EA+ ++ ++     +P I   NAL++GL K G      +  
Sbjct: 465 NDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLL 524

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  GLV D +TY  LI  CC +G V +   L +EM+ KGI+P +  + +L+HGLCN 
Sbjct: 525 RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNA 584

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +K+ EA  ++   ++ G VPN+YTY  ++DGYCK   V       +E++   L+ N V +
Sbjct: 585 DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY 644

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+   C  G + AA      M   GV  +   Y+ L+ G C  G + +A  L  EM K
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P+V  Y  +I G   +GQ+     +LQ+M    I  N  TY  +IDG+CK G  ++
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++MTEKG+ P+ VT+++  +G CK G ++ A  +  EM   ++  D + +T LID
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824

Query: 408 G 408
           G
Sbjct: 825 G 825



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 190/364 (52%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L++GL K GK     E +  ++  G V ++VT   LI   C  G++ + L L  +M+++
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+    + Y  LI G C E K+ E   +   M + G+ P++YT+N L+ G C    ++ A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
              +HE   +   PNV T+GV++DG CK  ++    N    +    +  N  VYN LI  
Sbjct: 591 SRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRA 650

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +C  GN+  A  L  +M+   +     TY+ L+ GLC +G ++ A+ LL +M KEG+L N
Sbjct: 651 YCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV Y ++I GY K G M K   V  +M+   + PN  T++ +IDG CK G    A  L  
Sbjct: 711 VVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLN 770

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K ++PD V + A  +GL K+G ++E  ++  EM    +     T ++LI G  +  
Sbjct: 771 EMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPS 830

Query: 449 RISN 452
             +N
Sbjct: 831 TATN 834



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I  F ++G  +EA  +  ++    +LP     NA  NGL K+GK +  ++  
Sbjct: 745 NKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVC 804

Query: 108 EEMVLCGLVADVVTYGVLIDCC 129
           +EM    +  D +TY  LID C
Sbjct: 805 DEMSSGAVCLDEITYTTLIDGC 826



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 37/72 (51%)

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD   ++TM+    +  R  D + L + M K+G+ P+ V    ++ G  ++G L  A+R 
Sbjct: 254 PDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 566 SEFLKESRIGSS 577
            E + + ++  S
Sbjct: 314 KEKMVKEKVSPS 325


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 264/513 (51%), Gaps = 7/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+I  S +G     +  Y ++    V P +   NA++N L K G         +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  TY  +I   C + D+  AL +F++M  +G EP  V Y+ LI+GLC+  ++
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M   G++P  +T    +   C +     A   + +M +   +PNV T+  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L+ A   F  M++ GVFPN   YN LI+   +   +  A  + + M +   
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TYN +IKG C +G  + A  ++  M + G  AN+VTYN++I GYC  G+   AL 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M + G +P+  +++ LI G CK   +++A GL+ EMV   L P+ V +TALIDG  
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           KD  +     L + M  +   P+V T + LIHGL K    S A    L K    +G +  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE--LCKVMIEEGIF-- 597

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y A+I  LC +G    A ++F+ M      P+  TY++++R L +  ++ +   L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            A++ + G++PD +    M+  Y  +G ++ AF
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 247/504 (49%), Gaps = 17/504 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+       ++ AL V+ ++      P     + L+NGL   G+ +  ++   EM
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G++    T    I   C  G    A  LF +M +KG EP V  YT LI GLC    +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M   GV PN  TYNAL++   +   +  A    + M  +   PN+VT+  +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C +G+ + A     +M + G   N+  YN +I G+C +GN   A+ +   M     
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD ++Y  LI G C + ++E A GL  +M  +G+  N VTY +LIDGYCK+  ++ A S
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G  PNV T++ LI G  K  N   A  L   M+ + + P+VV +TA+IDGL 
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G+    L ++ +M+E    P++ T SSLI  L + G++  A N F E     +     
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE----LERHGLI 667

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y  +I+A    G++  A      M     +P   TY  +++GL           L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE-------YL 720

Query: 531 LADMIKMGIVPDAVINQVMVRGYQ 554
           LAD  ++  +PD V N     GYQ
Sbjct: 721 LADQ-RLAALPDVVPNCSF--GYQ 741



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 196/413 (47%), Gaps = 4/413 (0%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI    ++  M    S    + + G+   L+ Y+AL+    ++      ++ YH ML   
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +QPN++ +  +++ LCK G +  A      + +  + P+ F Y  +I GHC+  +L  A+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + ++M K    P+  TY+ LI GLC  G++  A  L+++M   GIL    T    I   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G  E A  +   M  KG EPNV T+++LI G C +G +  A+GL+  M    + P+ 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + ALI+ L ++  +K    +   M     +P++ T + +I G    G    A+   L 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM---LV 447

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +    G+ S N V Y  II+  C  G    A ++   MR    +PD  +YT ++ G  
Sbjct: 448 MNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +  +M     L  +M+  G+ P+ V    ++ GY ++  L +A    E +K S
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 190/425 (44%), Gaps = 27/425 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I  + + G+   AL +    R     P   +   L+ G  K  K +S +  +
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV  GL  + VTY  LID  C    +  A +L + M   G  P V  Y +LIHGL  +
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N    AE + + M E G+ PN+ TY A++DG CK    + ALE +++M+     PN++T+
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+  L + G++  A N F  + + G+ P+   Y  +I+ +  +G +  A +    M K
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 288 FEISPDVFTYNILIKGL--------------------CGVG----QLEGAEGLLQKMYKE 323
               P ++TY +LIKGL                    C  G      +    +  K+ + 
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
               +V   N+L+      G   +A  +   M  +G+ P+   ++SL+    +  N+D A
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           MG++  M  +     +  +  LI  L +    KE    ++ ML     P     + LI G
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 444 LFKNG 448
           L ++G
Sbjct: 879 LLRDG 883



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 24/354 (6%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +Q  N L++GL K+  F    E  + M+  G+  +VVTY  +ID  C  G    AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F++MI++G  P ++ Y+ LI  L  E K+ EAE++F  +   G++P+  TY  +++ Y  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL--------------------CKVG--- 238
              V  A  F   M+    QP + T+GVL+ GL                    C  G   
Sbjct: 683 SGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQT 742

Query: 239 -ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            +  A       +A+     ++ V N L+     AG  FEA  L   M    + PD   Y
Sbjct: 743 TDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 802

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N L+  L  V  ++ A G+ + M  +G   ++  Y  LI   C+    ++A      M  
Sbjct: 803 NSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 862

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
           +   P+ V  + LIDG  + G  D  M     M  +  +P   ++T L    SK
Sbjct: 863 RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 256/491 (52%), Gaps = 14/491 (2%)

Query: 66  GHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +EE L    ++     +P + AC +L+ G  + GK        E +   G V DV+TY
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSM- 180
            VLI   C  G++ KAL + + M    + P VV Y  ++  LC+  K+ EA E + R + 
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           REC   P++ TY  L++  C  + V +A++   EM     +P+VVT+ VL++G+CK G L
Sbjct: 237 REC--YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A  F  +M  +G  PN+  +N ++   C  G   +A  L S+M +   SP V T+NIL
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC    L  A  +L+KM K G + N ++YN L+ G+C+E  M++A+     M  +G 
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P++VT+++L+   CK G +DAA+ +  ++  K   P ++ +  +IDGL+K G  +  + 
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L +EM    + P + T S+L+ GL + G++  A+  F +     +G    P+ V Y AI+
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD----MEGLSIKPSAVTYNAIM 530

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC   Q  +A    + M     +P   TYT ++ G+       + + LL ++   G V
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFV 590

Query: 541 PDAVINQVMVR 551
             +   QV+V+
Sbjct: 591 KKSSAEQVVVK 601



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 227/431 (52%), Gaps = 10/431 (2%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           ++LI  F   G  ++A  +   +E    +P +   N L+ G  K G+ D   E  E M  
Sbjct: 145 TSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM-- 202

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +  DVVTY  ++   C  G + +A+ + D  + +   P V+ YTILI   CN++ + +
Sbjct: 203 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ 261

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +   MR+ G  P++ TYN L++G CK   ++ A++F + M  +  +PNV+T  +++ 
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            +C  G    A      M + G  P++  +N LI+  C+   L  A+ +  +M K    P
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  +YN L+ G C   +++ A   L+ M   G   ++VTYN+L+   CK+G ++ A+ + 
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           +Q++ KG  P ++T++++IDG  K G  + A+ L  EM  K L PD++ ++ L+ GL ++
Sbjct: 442 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGRE 501

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E ++++ +M    I PS  T ++++ GL K  + S A++F     +K     C P 
Sbjct: 502 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG----CKPT 557

Query: 473 HVLYAAIIQAL 483
              Y  +I+ +
Sbjct: 558 EATYTILIEGI 568



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 199/391 (50%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ LI  + + G I++AL V  ++ V P +   N +L  L   GK     E  +  +  
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C    V +A+ L DEM  KG +P VV Y +LI+G+C E ++ EA
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                +M   G  PN+ T+N ++   C       A     +ML     P+VVTF +L++ 
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINF 357

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+   L  A +    M K G  PN   YN L+ G C+   +  A+     M      PD
Sbjct: 358 LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 417

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+  LC  G+++ A  +L ++  +G    ++TYN++IDG  K G  E A+ +  
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+S+L+ G  + G +D A+ ++ +M   S+ P  V + A++ GL K  
Sbjct: 478 EMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQ 537

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                +     M+E    P+  T + LI G+
Sbjct: 538 QTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 13/409 (3%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I +  L    ++ E       M   G +P++    +L+ G+C+     +A      + + 
Sbjct: 111 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENS 170

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              P+V+T+ VL+ G CK GE+  A      M+   V P++  YN ++   C +G L EA
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEA 227

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           M +     + E  PDV TY ILI+  C   GVGQ   A  LL +M K+G   +VVTYN L
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ---AMKLLDEMRKKGCKPDVVTYNVL 284

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G CKEG +++A+   + M   G +PNV+T + ++   C  G    A  L ++M+ K  
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P VV F  LI+ L +   +   + + ++M +    P+  + + L+HG  +  ++  A+ 
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +      +     C P+ V Y  ++ ALC DG++  A ++ + + S    P   TY T++
Sbjct: 405 YLEIMVSRG----CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            GL +  +    + LL +M + G+ PD +    ++RG    G +  A +
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 7/256 (2%)

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           F  NI ++ L   G+LE     L++M  +G + +V+   SLI G+C+ G  +KA  +   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +   G  P+V+T++ LI G CK+G ID A+ +   M   S+ PDVV +  ++  L   G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +KE + +    L+ +  P V T + LI     +  +  A+    E   K     C P+ V
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG----CKPDVV 279

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I  +C +G++ +A K  ++M S   +P+  T+  +LR +    R +D   LL+DM
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM 339

Query: 535 IKMGIVPDAVINQVMV 550
           ++ G  P  V   +++
Sbjct: 340 LRKGCSPSVVTFNILI 355


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 262/492 (53%), Gaps = 8/492 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++   +   + + +  +F+ V +F +++ L G+  ++ T  ++I+C C       A +
Sbjct: 75  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 134

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G EP    +  LI GL  E K+ EA  +   M E G  P++ TYN++++G C
Sbjct: 135 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  D + AL+   +M   N++ +V T+  ++D LC+ G + AA + F  M   G+  ++ 
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G CKAG   +   L  +M   EI P+V T+N+L+      G+L+ A  L ++M
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              GI  N++TYN+L+DGYC +  + +A ++   M      P++VTF+SLI G C    +
Sbjct: 315 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D  M ++  +  + LV + V ++ L+ G  + G +K    L++EM+   + P V T   L
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 434

Query: 441 IHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + GL  NG++  AL  F  L+K+ K D G      V+Y  II+ +C  G++  A  LF  
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKS-KMDLGI-----VMYTTIIEGMCKGGKVEDAWNLFCS 488

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    ++P+  TYT M+ GL +   + +  +LL  M + G  P+      ++R +  +GD
Sbjct: 489 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 548

Query: 559 LKSAFRCSEFLK 570
           L ++ +  E +K
Sbjct: 549 LTASAKLIEEMK 560



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 241/451 (53%), Gaps = 4/451 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+ GL  +GK        + MV  G   DVVTY  +++  C  GD   AL+L
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M ++ ++  V  Y+ +I  LC +  +  A S+F+ M   G+  ++ TYN+L+ G CK
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N       +M+   + PNV+TF VL+D   K G+L+ A   +  M   G+ PNI  
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+C    L EA ++   M + + SPD+ T+  LIKG C V +++    + + + 
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G++AN VTY+ L+ G+C+ G ++ A  +  +M   GV P+V+T+  L+DG C  G ++
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 445

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ ++ ++    +   +V++T +I+G+ K G +++   L+  +    + P+V T + +I
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G +S A N  L K ++ DG   +PN   Y  +I+A   DG +  ++KL  +M+S
Sbjct: 506 SGLCKKGSLSEA-NILLRKMEE-DGN--APNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
                D  +   ++  LL A + L +   L+
Sbjct: 562 CGFSADASSIKMVIDMLLSAMKRLTLRYCLS 592



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 216/406 (53%), Gaps = 4/406 (0%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K  +A ++F+ M     +P+L  ++       +    N  L+F  ++  + +  N+ T  
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++  C+  +   A +    + K G  P+   +N LI G    G + EA+ L   M + 
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PDV TYN ++ G+C  G    A  LL+KM +  + A+V TY+++ID  C++G ++ A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           +S+  +M  KG++ +VVT++SL+ G CKAG  +    L  +MV + +VP+V+ F  L+D 
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K+G ++E   LYKEM+   I+P++ T ++L+ G     R+S A N      D      
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNK 353

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSP+ V + ++I+  C   ++    K+F ++    L  +  TY+ +++G  ++ ++    
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            L  +M+  G++PD +   +++ G  +NG L+ A    E L++S++
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 211/426 (49%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EMI     P++V ++     +    +        + +   G+  N+YT N +++
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+      A     +++    +P+  TF  L+ GL   G++  A      M + G  P
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN +++G C++G+   A+ L  +ME+  +  DVFTY+ +I  LC  G ++ A  L 
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +GI ++VVTYNSL+ G CK G       +   M  + + PNV+TF+ L+D   K 
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  LY EM+ + + P+++ +  L+DG      + E   +   M+  K +P + T 
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G     R+ + +  F   + +   G  + N V Y+ ++Q  C  G+I  A +LF 
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKR---GLVA-NAVTYSILVQGFCQSGKIKLAEELFQ 417

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + PD  TY  +L GL    ++   + +  D+ K  +    V+   ++ G  + G
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477

Query: 558 DLKSAF 563
            ++ A+
Sbjct: 478 KVEDAW 483



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 184/426 (43%), Gaps = 78/426 (18%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           N L+ +   K +P +  F++LI  +  +  +++ + V+R I    ++      + L+ G 
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            + GK     E ++EMV  G++ DV+TYG+L+D  C  G + KAL +F+++    ++  +
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V+YT +I G+C   K+ +A ++F S+   GV PN+ TY  ++ G CK   ++ A     +
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-----------------VFP 257
           M      PN  T+  L+    + G+L A+      M   G                    
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP----DVFTYNILIKGLCGVGQLEGA 313
            + +  CL  G     +L E     S  EK  +S      +F  N +   L  V  +E A
Sbjct: 584 RLTLRYCLSKGSKSRQDLLEL----SGSEKIRLSSLTFVKMFPCNTITTSL-NVNTIE-A 637

Query: 314 EGL--------LQKMYKEGIL-------ANVVTYNSLI-----DGYC------------- 340
            G+        L+K+ +  +L         V+  N L+     D  C             
Sbjct: 638 RGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAV 697

Query: 341 ----KEGDMEK---------ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
               + G M +         A  +  +M ++G+ PN +T+SSLIDG CK   +D A  + 
Sbjct: 698 HYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQML 757

Query: 388 TEMVIK 393
             MV K
Sbjct: 758 DLMVTK 763



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 31/47 (65%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           AE L ++M + GI  N +TY+SLIDG+CKE  +++A  +   M  KG
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM+    +P +V F+     +++       L   K++    I  +++T++ +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  +   A +  L K  K   GY  P+   +  +I+ L  +G++ +A  L   M 
Sbjct: 120 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +  +PD  TY +++ G+ R+      + LL  M +  +  D      ++     +G + 
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 561 SAFRCSEFLKESRIGSS 577
           +A    + ++   I SS
Sbjct: 236 AAISLFKEMETKGIKSS 252


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 247/449 (55%), Gaps = 7/449 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           + S LI  FS++G    +  V  KI  +   P +     L+ GL  KG+     +F++++
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + V+YG LI+  C  G    AL L   +  K ++P VV+Y  +I  +C    +
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  ++  M   G+ P++ TYNAL+ G+C V  +  A + +++M+  N+ PNV TF +L
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG CK   L+ A N    M K G+ P++F YN L+D +C    + +A  + + + +  +
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P++ +Y+I+I G C + +++ A  L ++M+   I+ +VVTYNSLIDG CK G +  AL 
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++GV  + +T++S++D  CK   +D A+ L T+M  + + PD+  +T L+DGL 
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G +++   +++++L       V   +++I G   +G    +L+       K +   C 
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL----SKMEENGCI 524

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDM 499
           PN V Y  II +L    +  KA KL  +M
Sbjct: 525 PNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 250/469 (53%), Gaps = 4/469 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     +L  L+K   + +V   + +M   G+ +D+V   +LI+C    G    + ++
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G EP V+  T LI GLC + ++ +A      +   G   N  +Y  L++G CK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V   + AL+    +    +QPNVV +  ++D +CKV  +  A + +  M   G+ P++  
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C  G + +A  L ++M    I+P+V+T+NIL+ G C   +L+ A+ +L  M 
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+GI  +V TYNSL+D YC   ++ KA  + + ++++GV PN+ ++S +I G CK   +D
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM   +++PDVV + +LIDGL K G +   L+L  EM +  +     T +S++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN ++  A+    +  D+       P+   Y  ++  LC +G++  A  +F D+  
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEG----IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                D   YT M++G        + + LL+ M + G +P+AV  ++++
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 262/512 (51%), Gaps = 11/512 (2%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQAC 87
           H   S FN L   + PK  PS+F    ++ +  +  H    + ++R++E   +   +   
Sbjct: 53  HNLVSSFNRLLHQKNPK--PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVIL 110

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + L+N   + G+    +    +++  G   +V+T   LI   C +G + +AL   D+++ 
Sbjct: 111 SILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA 170

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G     V Y  LI+GLC   +   A  + R +    V PN+  YN ++D  CKV  VN 
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A + Y EM+   + P+VVT+  L+ G C VG+++ A + F  M    + PN++ +N L+D
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK   L EA ++ + M K  I PDVFTYN L+   C V ++  A+ +   + + G+  
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+ +Y+ +I G+CK   +++A+++  +M    + P+VVT++SLIDG CK G I  A+ L 
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + +  D + + +++D L K+  + + + L  +M +  I P + T ++L+ GL KN
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR+ +A   F    D    GY    ++ Y A+IQ  C  G   ++  L S M  +   P+
Sbjct: 471 GRLEDARIVF---EDLLVKGYILDVNI-YTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
             TY  ++  L           LL +MI  G+
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 211/445 (47%), Gaps = 39/445 (8%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K  +P++  +  ++  L   N      S+ R M   G+  +L   + L++ + ++     
Sbjct: 66  KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           +     ++L    +PNV+T   L+ GLC  G++  A  F   +   G   N   Y  LI+
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G    A+ L   ++   + P+V  YN +I  +C V  +  A  L  +M  +GI  
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVTYN+LI G+C  G M+ A  + ++M  + + PNV TF+ L+DG CK   +  A  + 
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 388 TEMVIKSLVPDVVVFTALID-----------------------------------GLSKD 412
             M+ + + PDV  + +L+D                                   G  K 
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + E + L+KEM    I P V T +SLI GL K G+IS AL    E  D+        +
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG----VPHD 421

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y +I+ ALC + Q+ KA  L + M+ + ++PD CTYTT++ GL +  R+ D  ++  
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481

Query: 533 DMIKMGIVPDAVINQVMVRGYQENG 557
           D++  G + D  I   M++G+  +G
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHG 506



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 122/246 (49%), Gaps = 19/246 (7%)

Query: 16  CLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALW 73
           CL+K+V        K  H+        N++     NP++  +S +I  F ++  ++EA+ 
Sbjct: 328 CLVKEVN-------KAKHI-------FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373

Query: 74  VYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
           +++++    ++P +   N+L++GL K GK     +  +EM   G+  D +TY  ++D  C
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
               V KA+ L  +M D+GI+P +  YT L+ GLC   ++ +A  +F  +   G + ++ 
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            Y A++ G+C     + +L+   +M  +   PN VT+ +++  L    E   A      M
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553

Query: 251 AKFGVF 256
              G+F
Sbjct: 554 ITRGLF 559


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 170/570 (29%), Positives = 277/570 (48%), Gaps = 45/570 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + N  + + L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     
Sbjct: 146 RVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQAD 205

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   +VV Y  +ID    +GDV KA +LF EM+ +GI P +V Y  ++H
Sbjct: 206 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 265

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M    V+PN +TYN L+ GY        A+  + EM  H++ P
Sbjct: 266 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 325

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLF 276
           +VVT  +LM  LCK G+++ A + F  MA  G  P++F YN +++G+   G      +LF
Sbjct: 326 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 385

Query: 277 E-----------------------------AMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           +                             AM + +EM    + PDV TY  +I  LC +
Sbjct: 386 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 445

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A     +M  +G+  +   YN LI G+C  G + KA  + S++   G+  ++V F
Sbjct: 446 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 505

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SS+I+  CK G +  A  ++   V   L PD VV+  L+DG    G M++ LR++  M+ 
Sbjct: 506 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+V    +L++G  K GRI   L+ F E   +       P+ +LY+ II  L   G
Sbjct: 566 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG----IKPSTILYSIIIDGLFEAG 621

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  D CTY  +LRGL + +   + + L  ++  M +  + +   
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 681

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            M+ G  +   ++ A      +  SR+  S
Sbjct: 682 TMIDGMFQTRRVEEAKDLFASISRSRLVPS 711



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 257/512 (50%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVVT  +L+   C  G + +A ++FD M  KG  P V  Y I+++G   +  +
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 378

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P+ YT+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 379 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 438

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + YNCLI G C  G+L +A  L SE+    +
Sbjct: 439 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 498

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  ++ +I  LC +G++  A+ +       G+  + V YN L+DGYC  G MEKAL 
Sbjct: 499 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 558

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPNVV + +L++G CK G ID  + L+ EM+ + + P  ++++ +IDGL 
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 618

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I   + T + ++ GLFKN                       
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR---------------------- 656

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ +  T  TM+ G+ + +R+ +   L
Sbjct: 657 -------------CFDEAIF----LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + +  +VP  V   +M+    + G ++ A
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEA 731



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 239/510 (46%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 116 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 175

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y+IL+  LC++ K  +A+ + R M E G V  PN+  YN ++DG+ K 
Sbjct: 176 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 235

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P++VT+  ++  LCK   +  A  F   M    V PN + Y
Sbjct: 236 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 295

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G+   G   EA+ +  EM +  I PDV T ++L+  LC  G+++ A  +   M  
Sbjct: 296 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 355

Query: 323 EGILANVVTYNSLIDGYCKEG---DM--------------------------------EK 347
           +G   +V +YN +++GY  +G   DM                                +K
Sbjct: 356 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 415

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + + PD   +  LI 
Sbjct: 416 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 475

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +   SS+I+ L K GR+ +A N F    D T   
Sbjct: 476 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF----DLTVNV 531

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V+Y  ++   C  G++ KA ++F  M S  + P+   Y T++ G  +  R+ + 
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  E G
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAG 621



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  NI + N L++G C+A    EA+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+Y+IL+K LC  G+   A+ LL+ M + G +   NVV YN++I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  +  +M ++G+ P++VT++S++   CKA  +D A     +MV K ++
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   +  LI G S  G  KE +R++KEM    I P V T+S L+  L K G+I  A + 
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P+   +  +I+A   
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++PD  TY T++  L R  +M D M     MI  G+ PD   
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 470 YNCLIQGFCTHGSLLKA 486



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 186/340 (54%), Gaps = 3/340 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI A++  G +++A+ ++ ++    V P +     ++  L + GK D   E + +M
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D   Y  LI   C  G ++KA  L  E+++ G+   +V ++ +I+ LC   ++
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           ++A+++F      G+ P+   YN LMDGYC V  + +AL  +  M+   ++PNVV +G L
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +    + F  M + G+ P+  +Y+ +IDG  +AG    A     EM +  I
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + D+ TYNI+++GL      + A  L +++    +  N++T N++IDG  +   +E+A  
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           + + ++   + P+VVT+S +I    K G ++ A  +++ M
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 738



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  ++++   L++G  +     E L
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +    +     G  CSPN V Y  
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPNVVAYNT 227

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY +++  L +A+ M      L  M+   
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++P+      ++ GY   G  K A R  + ++   I
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 69  EEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +EA+++++++  +     I   N +++G+ +  + +   + +  +    LV  VVTY ++
Sbjct: 659 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIM 718

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           I     +G V +A ++F  M + G EP   +   ++  L  +N++V A +    + E
Sbjct: 719 ITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 775


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 256/515 (49%), Gaps = 9/515 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+T+I    + G ++EA  +   I   +  P      +L+ G  +    D  +  ++ M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + VTY  LI+  C +G + +A+++ +EM+ KGIEPTV  YTI +  LC+    
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M++ G VPN+ T+ AL+ G  +      A+  YH+ML   L P  VT+  L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC  G    A   F  M   G  P+   YN +I   C  G++ +AM +  +M K   
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+V TYN LI G C  G L  A  LL+ M   G+  +  TY  LI G+ + G +E A S
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M E G+ PN VT++++IDG      +D A+ L+ +MV    +P    +  +I G S
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  ++ E      +M++  + P+V T +S I GL +NGR   A   F E   +       
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN----YF 619

Query: 471 PNHVLYAAIIQALCYDGQILKAS--KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           PN   Y+++I  LC +G+   A    L + +      P+  TYTT+++GL    R  +  
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L+  M K G+ P   I + ++ G  +N  ++SA 
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 236/495 (47%), Gaps = 36/495 (7%)

Query: 94  LIKKGKFDSV---WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LI+ GKFD V    + Y +M+  G+   ++T+  +I+  C +G V +A  +   +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P    YT LI G C  + +  A +MF  M + G  PN  TY+ L++G C    +  A++
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EM+   ++P V T+ + +  LC  G    A      M K G  PNI  +  LI G  
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G    A+ L  +M    + P   TYN LI  LC  G+ E A  + + M   G L +  
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN +I  +C  GD++KA+ +  +M + G  PNV+T+++LI G CK GN++ AM L   M
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               L PD   +T LI G S+ G ++    L+  M+E  I+P+  T +++I G F   ++
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 451 SNALNFFLEKTD------------------KTDG-----GYCS--------PNHVLYAAI 479
            +AL  F +  +                  KT+       +C         PN + Y + 
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM--LLADMIKM 537
           I  LC +G+   A K+F +M   N  P+  TY++++ GL +  R  D  M  LLA +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 538 GIVPDAVINQVMVRG 552
           G  P+      +V+G
Sbjct: 654 GCEPNVDTYTTLVKG 668



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 236/476 (49%), Gaps = 11/476 (2%)

Query: 52  PSVFSTLI--IAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V++  I  ++  + G   EA+ +  K++    +P IQ   AL++GL + GKF+     
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGL 364

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y +M+  GLV   VTY  LI+  C +G    A  +F  M+  G  P+   Y  +I   C 
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCL 424

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + +A  +F  M + G  PN+ TYN L+ GYCK  ++N A+     M  + L+P+  T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G  + G+L  A + F  M + G+ PN   Y  +IDG+     + +A++L  +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P   TYN++I G      +  AE    KM K+G+L NV+TY S IDG C+ G   
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI-DAAM-GLYTEMVIKSLVPDVVVFTA 404
            A  +  +M ++   PN+ T+SSLI G C+ G   DA M  L   +      P+V  +T 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+ GL  +G   E  +L   M +  + PS     +L+ G  KN ++ +ALN F       
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
              + S     Y A+I ALC +  I +A  +F  M   +   D   +T +L GLL+
Sbjct: 725 FQLHLSD----YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLK 776



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 213/427 (49%), Gaps = 4/427 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +++ +M++ GI P+++ +  +I+ LC + ++ EA+ +   +      PN +TY +L+ 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G+C+  +++ A   +  M+     PN VT+  L++GLC  G L  A +    M + G+ P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            ++ Y   +   C AG   EA+ L  +M+K    P++ T+  LI GL   G+ E A GL 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM  +G++   VTYN+LI+  C EG  E A ++   M   G  P+  T++ +I   C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G+I  AM ++ +M+     P+V+ +  LI G  K GN+   +RL + M    + P  +T 
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G  + G++ +A + F    +       SPNHV Y AII       ++  A  LF 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHG----ISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M      P + TY  M+ G  +   + +       M+K G++P+ +     + G   NG
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601

Query: 558 DLKSAFR 564
               AF+
Sbjct: 602 RTGLAFK 608



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 212/438 (48%), Gaps = 40/438 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI   S  G  E A+ +Y K+    ++P     NAL+N L  +G+F++ +  +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+  G +    TY  +I C C  GD+ KA+ +FD+M+  G  P V+ Y  LI+G C +
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460

Query: 168 N-----------------------------------KMVEAESMFRSMRECGVVPNLYTY 192
                                               K+  A S+F  M E G+ PN  TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            A++DGY  +A V+ AL  + +M+     P+  T+ V++ G  K   +  A NF   M K
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN+  Y   IDG C+ G    A  +  EMEK    P+++TY+ LI GLC  G+ E 
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640

Query: 313 AE--GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           AE   LL ++   G   NV TY +L+ G C EG   +A  +   M +KG++P+   + +L
Sbjct: 641 AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G+CK   +++A+ ++  M        +  + ALI  L K+  ++E   +++ MLE   
Sbjct: 701 LIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 431 TPSVFTVSSLIHGLFKNG 448
                  + L+ GL K G
Sbjct: 761 NSDEVVWTVLLDGLLKEG 778



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 217/450 (48%), Gaps = 6/450 (1%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           ++I  C  +G+V +      E+  K     T+  +T L+  L   + +  A  M+  M  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+ P+L T+N +++  CK   V  A      +  ++  PN  T+  L+ G C+   L  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M K G  PN   Y+ LI+G C  G L EAM +  EM +  I P V+TY I + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            LC  G    A  LL KM K G + N+ T+ +LI G  ++G  E A+ +  +M   G+ P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
             VT+++LI+  C  G  + A  ++  M+    +P    +  +I      G++++ + ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +ML+A  +P+V T ++LI+G  K G ++NA+       +   G    P+   Y  +I  
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL----EIMKGNGLKPDAWTYTELISG 491

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
               G++  A+ LF  M    + P++ TYT ++ G     ++ D + L   M++ G +P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 543 AVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
           +    VM+ G+ +   +  A   C + +K+
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQ 581



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 163/364 (44%), Gaps = 18/364 (4%)

Query: 40  NALNSLEIPKFN-----PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           NA+  LEI K N        ++ LI  FS  G +E A  ++  +    + P      A++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G     K D     + +MV  G +    TY V+I        + +A N   +M+ +G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P V+ YT  I GLC   +   A  +F  M +    PNLYTY++L+ G C+      A E 
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EM 643

Query: 212 YH---EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           Y+    + H+  +PNV T+  L+ GLC  G    A    V M K G+ P+  +Y  L+ G
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK   +  A+++   M+       +  Y  LI  LC    +E A+ + Q M ++   ++
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS------SLIDGQCKAGNIDA 382
            V +  L+DG  KEG+ +  L +   M  +    N  T+       S +D   K   I  
Sbjct: 764 EVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQ 823

Query: 383 AMGL 386
            +G+
Sbjct: 824 QLGI 827


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 270/545 (49%), Gaps = 42/545 (7%)

Query: 58  LIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           LI  F++   +E+ L V+ K+    +LP ++ CN +L  L  K   + V E Y  M+ C 
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +   +VT+  ++D  C +G+V +A+ + D M   G +P  V Y +L++GL  + +   A+
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   M   G+  + +TYN L+ G+CK      A +   EML     P VVT+  +M  L
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C++G +  A  +   M    + P++  YN LI G+ + GN  EA+ L SE+    + P V
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM--------- 345
            TYN LI G C  G L+ A+G+   M K G+  +VVT+  L+ G+C+ G++         
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 346 --------------------------EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
                                      KA  +  +M  +G  P+++T++ LI+G CK GN
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGN 502

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            D A  L  +M ++ +VPD V +T++I      G +++   ++ +ML+  I PSV T + 
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LIH     GR+  A  +F E  DK      SPN + Y A+I  LC +  +  A  LF++M
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKG----VSPNVITYNALIYGLCKENMMDVAYNLFAEM 618

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            S  + P+  TYT ++      +   D + L  DM+   I PD+  +  +++   ++  L
Sbjct: 619 ESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678

Query: 560 KSAFR 564
            +  R
Sbjct: 679 LAVLR 683



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 240/467 (51%), Gaps = 4/467 (0%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E+G   E L V R     P   + N L+NGL  KG+FD   E  E+M + GL     TY 
Sbjct: 222 EVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYN 281

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            LI   C +    +A +L  EM+ +G  PTVV Y  +++ LC   ++ +A      M   
Sbjct: 282 PLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE 341

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
            ++P+L +YN L+ GY ++ +   AL  + E+   NL P+VVT+  L+DG C+ G L  A
Sbjct: 342 DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIA 401

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M K G+ P++  +  L+ G C+ GNL  A  L  EM    + PD   Y   I G
Sbjct: 402 KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
              +G    A G+ ++M  EG   +++TYN LI+G CK G+ + A  +  +M  +G+ P+
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPD 521

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT++S+I     +G +  A  ++++M+ K + P VV +T LI   +  G +    + + 
Sbjct: 522 HVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFD 581

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM +  ++P+V T ++LI+GL K   +  A N F E   K      SPN   Y  +I   
Sbjct: 582 EMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG----VSPNKYTYTILINEN 637

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                   A KL+ DM    ++PD+CT++ +++ L +  ++L V+ L
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 259/520 (49%), Gaps = 27/520 (5%)

Query: 48  PKFNPS--VFSTLIIAFSEMGHIEEALWVYRK-IEVLPAIQACNALLNGLIKKGKFDSVW 104
           P F+ S   F  ++   ++ G ++ A WV  K IEV    +    +L+ L+  G      
Sbjct: 79  PNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEV----KVDGGVLDVLVGIG------ 128

Query: 105 EFYEEMVLCGLVADVVT--YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                   CG  ++V      +LI     +  + K L +F +M++ G+ P V     ++ 
Sbjct: 129 --------CGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLK 180

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            L +++ + E E ++  M +C + P + T+N +MD  CK  +V RA+E    M      P
Sbjct: 181 LLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDP 240

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N V++ VL++GL   GE   A      M+  G+  +   YN LI G CK     EA  L 
Sbjct: 241 NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLR 300

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM      P V TYN ++  LC +G++  A   L  M  E ++ ++V+YN+LI GY + 
Sbjct: 301 REMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRL 360

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G+  +AL + S++  K + P+VVT+++LIDG C+ GN+D A G+  +M+   L PDVV F
Sbjct: 361 GNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTF 420

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T L+ G  + GN+     L+ EML   + P     ++ I G  K G  S A  F +++  
Sbjct: 421 TILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA--FGMKEEM 478

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K +G    P+ + Y  +I  LC  G    A++L   MR + + PD+ TYT+++   L + 
Sbjct: 479 KAEG--FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +     + +DM+K GI P  V   V++  Y   G L  A
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFA 576



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 218/447 (48%), Gaps = 19/447 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++T++ +   +G + +A   L V    +++P + + N L+ G  + G F      
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLL 369

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + E+    LV  VVTY  LID  C  G++  A  + D+MI  G+ P VV +TIL+ G C 
Sbjct: 370 FSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQ 429

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A+ +F  M   G+ P+   Y   + G  K+ + ++A     EM      P+++T
Sbjct: 430 MGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLIT 489

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + VL++GLCK+G    A      M   G+ P+   Y  +I  H  +G L +A  + S+M 
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K  I P V TY +LI      G+L+ A+    +M  +G+  NV+TYN+LI G CKE  M+
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMD 609

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A ++ ++M  KGV PN  T++ LI+          A+ LY +M+ + + PD    +AL+
Sbjct: 610 VAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH-GLFKNGRISNALNFFLEKTDKTD 465
             LSKD  +   LRL    L      S +     +     KN     A++ F EK     
Sbjct: 670 KHLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVF-EK----- 723

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKA 492
           GG+  P        +  LC   ++LKA
Sbjct: 724 GGFLEP-------FLGKLCAKSRVLKA 743



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 39/376 (10%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  + K   + + L  +++M+++ L P+V     ++  L     +      +  M K  
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P I  +N ++D  CK G +  A+ +   M  F   P+  +YN+L+ GL G G+ + A+
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+++M   G+  +  TYN LI G+CK+   E+A  +  +M  +G  P VVT+++++   
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G +  A      MV + L+PD+V +  LI G S+ GN  E L L+ E+    + PSV
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI                       DGG                C  G +  A  
Sbjct: 383 VTYNTLI-----------------------DGG----------------CRTGNLDIAKG 403

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +  DM    L PD  T+T ++RG  +   +     L  +M+  G+ PD +     + G  
Sbjct: 404 MKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463

Query: 555 ENGDLKSAFRCSEFLK 570
           + G+   AF   E +K
Sbjct: 464 KLGNPSKAFGMKEEMK 479



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 10/303 (3%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV   N ++K L     +   E +   M K  I   +VT+N+++D  CKEG++ +A+ V
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G +PN V+++ L++G    G  D A  L  +M +  L      +  LI G  K
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCK 289

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
               +E   L +EML     P+V T +++++ L + GR+S+A  +     D        P
Sbjct: 290 KEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYL----DVMVNEDLMP 345

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y  +I      G   +A  LFS++RS NL P   TY T++ G  R   +     + 
Sbjct: 346 DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE--SRIGSSETEGHTTRSFLG 589
            DMIK G+ PD V   ++VRG+ + G+L  A    E   E  SR    +   +TTR  +G
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMA---KELFDEMLSRGLKPDCIAYTTR-IVG 461

Query: 590 HLK 592
            LK
Sbjct: 462 ELK 464


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 262/492 (53%), Gaps = 8/492 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++   +   + + +  +F+ V +F +++ L G+  ++ T  ++I+C C       A +
Sbjct: 85  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G EP    +  LI GL  E K+ EA  +   M E G  P++ TYN++++G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  D + AL+   +M   N++ +V T+  ++D LC+ G + AA + F  M   G+  ++ 
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G CKAG   +   L  +M   EI P+V T+N+L+      G+L+ A  L ++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              GI  N++TYN+L+DGYC +  + +A ++   M      P++VTF+SLI G C    +
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D  M ++  +  + LV + V ++ L+ G  + G +K    L++EM+   + P V T   L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 441 IHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + GL  NG++  AL  F  L+K+ K D G      V+Y  II+ +C  G++  A  LF  
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKS-KMDLGI-----VMYTTIIEGMCKGGKVEDAWNLFCS 498

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    ++P+  TYT M+ GL +   + +  +LL  M + G  P+      ++R +  +GD
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558

Query: 559 LKSAFRCSEFLK 570
           L ++ +  E +K
Sbjct: 559 LTASAKLIEEMK 570



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 238/444 (53%), Gaps = 4/444 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+ GL  +GK        + MV  G   DVVTY  +++  C  GD   AL+L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M ++ ++  V  Y+ +I  LC +  +  A S+F+ M   G+  ++ TYN+L+ G CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N       +M+   + PNV+TF VL+D   K G+L+ A   +  M   G+ PNI  
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+C    L EA ++   M + + SPD+ T+  LIKG C V +++    + + + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G++AN VTY+ L+ G+C+ G ++ A  +  +M   GV P+V+T+  L+DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ ++ ++    +   +V++T +I+G+ K G +++   L+  +    + P+V T + +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G +S A N  L K ++ DG   +PN   Y  +I+A   DG +  ++KL  +M+S
Sbjct: 516 SGLCKKGSLSEA-NILLRKMEE-DGN--APNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 502 DNLRPDNCTYTTMLRGLLRAKRML 525
                D  +   ++  LL A + L
Sbjct: 572 CGFSADASSIKMVIDMLLSAMKRL 595



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 215/403 (53%), Gaps = 4/403 (0%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F+ M     +P+L  ++       +    N  L+F  ++  + +  N+ T  +++
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +   A +    + K G  P+   +N LI G    G + EA+ L   M +    
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV TYN ++ G+C  G    A  LL+KM +  + A+V TY+++ID  C++G ++ A+S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  KG++ +VVT++SL+ G CKAG  +    L  +MV + +VP+V+ F  L+D   K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G ++E   LYKEM+   I+P++ T ++L+ G     R+S A N      D      CSP
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSP 366

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V + ++I+  C   ++    K+F ++    L  +  TY+ +++G  ++ ++     L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M+  G++PD +   +++ G  +NG L+ A    E L++S++
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 211/426 (49%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EMI     P++V ++     +    +        + +   G+  N+YT N +++
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+      A     +++    +P+  TF  L+ GL   G++  A      M + G  P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN +++G C++G+   A+ L  +ME+  +  DVFTY+ +I  LC  G ++ A  L 
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +GI ++VVTYNSL+ G CK G       +   M  + + PNV+TF+ L+D   K 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  LY EM+ + + P+++ +  L+DG      + E   +   M+  K +P + T 
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G     R+ + +  F   + +   G  + N V Y+ ++Q  C  G+I  A +LF 
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKR---GLVA-NAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + PD  TY  +L GL    ++   + +  D+ K  +    V+   ++ G  + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 558 DLKSAF 563
            ++ A+
Sbjct: 488 KVEDAW 493



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM+    +P +V F+     +++       L   K++    I  +++T++ +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  +   A +  L K  K   GY  P+   +  +I+ L  +G++ +A  L   M 
Sbjct: 130 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +  +PD  TY +++ G+ R+      + LL  M +  +  D      ++     +G + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 561 SAFRCSEFLKESRIGSS 577
           +A    + ++   I SS
Sbjct: 246 AAISLFKEMETKGIKSS 262


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 266/515 (51%), Gaps = 12/515 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           LN+ + P+   SV  F+ LI  +   G I  A+ +   ++     P I   N L+NG  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G   +  +   E+ L  L  +V+TY  LID  C    +  AL ++DEM  K + P VV 
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT +++GLC   K+ EA+S+FR M E GVVPN ++Y  L+D   K  +V  A      M+
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  +VV +  LMDGL K G    A + F  + +  + PN   Y+ LIDGHCK G++ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +   L  EME+  I P+V  Y+ ++ G    G L  A  +++KM +  IL NV  Y +LI
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY K      AL +  +M  +G+E N     S ++   ++G ++ A  L+ +M+ + L+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI-SNALN 455
           PD V +T+++DG  K G   +   + +EM E      V   + LI+GLFK G+  S + +
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             + +         +P+   +  +I A C +G +  A KL ++M+S  L+P++ T   ++
Sbjct: 425 TGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + L  A  +   M LL DM+ MG  P    ++ ++
Sbjct: 479 QRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 264/566 (46%), Gaps = 37/566 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           +  + +    P+V  ++TLI A+ +   +E+AL++Y ++ V   +P +     ++NGL K
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            GK +     + EM   G+V +  +Y  LID    +G+V +A  L   M+ +GI   VV+
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT L+ GL        AE MF+ + E  +VPN  TY+AL+DG+CK+ DVN+      EM 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             ++ PNV+ +  ++DG  K G L  A +    M +  + PN+FVY  LIDG+ KA    
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A+ L  EM+   +  + F  +  +  L   G++E A+ L + M   G+L + V Y S++
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ K G    A ++  +MTEK    +VV ++ LI+G  K G  ++    +T M    L 
Sbjct: 375 DGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLA 433

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   F  +I+   K+GN+   L+L  EM    + P+  T + L+  L   G I   ++ 
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 457 F-------------------------------LEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                                           L   D+  G     +   Y  +I   C 
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G I +A+ +F DM    +  D  TY  ++ G   +  +     + + M+  G+ P+   
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
             +++ G      +K A      +KE
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKE 639



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 209/384 (54%), Gaps = 4/384 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L+DGYC+  +++RA+E    M      P++VT+  LM+G CK+G+L  A      ++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              + PN+  Y  LID +CK+  L +A+ +  EM    + PDV TY  ++ GLC  G++E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ + ++M + G++ N  +Y +LID   KEG++ +A  +  +M  +G+  +VV +++L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  KAG  + A  ++  ++ +SLVP+ V ++ALIDG  K G++ +   L +EM E  I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V   SS++ G  K G ++ A++   +   +       PN  +Y  +I       Q   
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN----ILPNVFVYGTLIDGYFKADQRGI 315

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  LF +M+S  L  +N    + +  L R+ RM +   L  DM+  G++PD V    M+ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 552 GYQENGDLKSAFRCSEFLKESRIG 575
           G+ + G    AF  ++ + E   G
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSG 399



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 250/506 (49%), Gaps = 8/506 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI    ++G + +   + +++E   + P +   +++++G  KKG  +   +  
Sbjct: 226 NCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVM 285

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV   ++ +V  YG LID          AL+LF EM  +G+E    +    ++ L   
Sbjct: 286 RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA+ +F+ M   G++P+   Y ++MDG+ K    + A     EM   +   +VV +
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++GL K+G+  +  +F   M + G+ P+   +N +I+ +CK GNL  A+ L +EM+ 
Sbjct: 406 NVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           + + P+  T NIL++ LC  G++E    LL  M   G      T+ +++D   K    + 
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADV 524

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            L +  Q+   GV+ ++ T+++LI   C+ G I  A  ++ +M+ K ++ D++ + ALI 
Sbjct: 525 ILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G     ++K+   ++ +ML   ++P+V T + L+ GL     I  A     +  ++    
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG--- 641

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN   Y  ++      G + +  KL+ +M +    P   TY  ++    + K+M   
Sbjct: 642 -LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGY 553
             L+ +M   GI P++    +++ G+
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGW 726



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 211/414 (50%), Gaps = 16/414 (3%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++++  F + G   +A  + +++    +   + A N L+NGL K GK++S   F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMR 428

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  T+  +I+  C +G++  AL L +EM   G++P  +   IL+  LC   ++ 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   M   G  P   T+ A++D   K    +  L  + +++   ++ ++ T+  L+
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C++G +R A   F  M   G+  +I  YN LI G+C + +L +A ++ S+M    +S
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V TYNIL+ GL     ++ A GL+ +M + G++ N  TY+ L+ G+ K G+M++ + +
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG--- 408
             +M  KG  P   T++ LI    K   +  A  L  EM ++ + P+   +  LI G   
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728

Query: 409 LSKDGNMKETL---------RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           LSK   + ++L         RL++EM E    P   T++ +   L K G+ ++A
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADA 782



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           +I  SV   + LI G  +NG IS A+     +  KT+G   +P+ V Y  ++   C  G 
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELL--EGMKTEGP--APDIVTYNTLMNGFCKIGD 67

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +  A KL  ++   NL P+  TYTT++    +++ + D + +  +M    +VPD V    
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 549 MVRGYQENG---DLKSAFRCSE--------FLKESRIGSSETEGHTTRSFL 588
           ++ G  ++G   + KS FR  E        F   + I S   EG+   +F+
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 266/515 (51%), Gaps = 12/515 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           LN+ + P+   SV  F+ LI  +   G I  A+ +   ++     P I   N L+NG  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G   +  +   E+ L  L  +V+TY  LID  C    +  AL ++DEM  K + P VV 
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT +++GLC   K+ EA+S+FR M E GVVPN ++Y  L+D   K  +V  A      M+
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  +VV +  LMDGL K G    A + F  + +  + PN   Y+ LIDGHCK G++ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +   L  EME+  I P+V  Y+ ++ G    G L  A  +++KM +  IL NV  Y +LI
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY K      AL +  +M  +G+E N     S ++   ++G ++ A  L+ +M+ + L+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI-SNALN 455
           PD V +T+++DG  K G   +   + +EM E      V   + LI+GLFK G+  S + +
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             + +         +P+   +  +I A C +G +  A KL ++M+S  L+P++ T   ++
Sbjct: 425 TGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + L  A  +   M LL DM+ MG  P    ++ ++
Sbjct: 479 QRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 264/566 (46%), Gaps = 37/566 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           +  + +    P+V  ++TLI A+ +   +E+AL++Y ++ V   +P +     ++NGL K
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            GK +     + EM   G+V +  +Y  LID    +G+V +A  L   M+ +GI   VV+
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT L+ GL        AE MF+ + E  +VPN  TY+AL+DG+CK+ DVN+      EM 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             ++ PNV+ +  ++DG  K G L  A +    M +  + PN+FVY  LIDG+ KA    
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A+ L  EM+   +  + F  +  +  L   G++E A+ L + M   G+L + V Y S++
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ K G    A ++  +MTEK    +VV ++ LI+G  K G  ++    +T M    L 
Sbjct: 375 DGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLA 433

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   F  +I+   K+GN+   L+L  EM    + P+  T + L+  L   G I   ++ 
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 457 F-------------------------------LEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                                           L   D+  G     +   Y  +I   C 
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G I +A+ +F DM    +  D  TY  ++ G   +  +     + + M+  G+ P+   
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
             +++ G      +K A      +KE
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKE 639



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 209/384 (54%), Gaps = 4/384 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L+DGYC+  +++RA+E    M      P++VT+  LM+G CK+G+L  A      ++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              + PN+  Y  LID +CK+  L +A+ +  EM    + PDV TY  ++ GLC  G++E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ + ++M + G++ N  +Y +LID   KEG++ +A  +  +M  +G+  +VV +++L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  KAG  + A  ++  ++ +SLVP+ V ++ALIDG  K G++ +   L +EM E  I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V   SS++ G  K G ++ A++   +   +       PN  +Y  +I       Q   
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN----ILPNVFVYGTLIDGYFKADQRGI 315

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  LF +M+S  L  +N    + +  L R+ RM +   L  DM+  G++PD V    M+ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 552 GYQENGDLKSAFRCSEFLKESRIG 575
           G+ + G    AF  ++ + E   G
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSG 399



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 250/506 (49%), Gaps = 8/506 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI    ++G + +   + +++E   + P +   +++++G  KKG  +   +  
Sbjct: 226 NCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVM 285

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV   ++ +V  YG LID          AL+LF EM  +G+E    +    ++ L   
Sbjct: 286 RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA+ +F+ M   G++P+   Y ++MDG+ K    + A     EM   +   +VV +
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++GL K+G+  +  +F   M + G+ P+   +N +I+ +CK GNL  A+ L +EM+ 
Sbjct: 406 NVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           + + P+  T NIL++ LC  G++E    LL  M   G      T+ +++D   K    + 
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADV 524

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            L +  Q+   GV+ ++ T+++LI   C+ G I  A  ++ +M+ K ++ D++ + ALI 
Sbjct: 525 ILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G     ++K+   ++ +ML   ++P+V T + L+ GL     I  A     +  ++    
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG--- 641

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN   Y  ++      G + +  KL+ +M +    P   TY  ++    + K+M   
Sbjct: 642 -LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGY 553
             L+ +M   GI P++    +++ G+
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGW 726



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 211/414 (50%), Gaps = 16/414 (3%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++++  F + G   +A  + +++    +   + A N L+NGL K GK++S   F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMR 428

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  T+  +I+  C +G++  AL L +EM   G++P  +   IL+  LC   ++ 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   M   G  P   T+ A++D   K    +  L  + +++   ++ ++ T+  L+
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C++G +R A   F  M   G+  +I  YN LI G+C + +L +A ++ S+M    +S
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V TYNIL+ GL     ++ A GL+ +M + G++ N  TY+ L+ G+ K G+M++ + +
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG--- 408
             +M  KG  P   T++ LI    K   +  A  L  EM ++ + P+   +  LI G   
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728

Query: 409 LSKDGNMKETL---------RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           LSK   + ++L         RL++EM E    P   T++ +   L K G+ ++A
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADA 782



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           +I  SV   + LI G  +NG IS A+     +  KT+G   +P+ V Y  ++   C  G 
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELL--EGMKTEGP--APDIVTYNTLMNGFCKIGD 67

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +  A KL  ++   NL P+  TYTT++    +++ + D + +  +M    +VPD V    
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 549 MVRGYQENG---DLKSAFRCSE--------FLKESRIGSSETEGHTTRSFL 588
           ++ G  ++G   + KS FR  E        F   + I S   EG+   +F+
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 256/515 (49%), Gaps = 9/515 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+T+I    + G ++EA  +   I   +  P      +L+ G  +    D  +  ++ M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + VTY  LI+  C +G + +A+++ +EM+ KGIEPTV  YTI +  LC+    
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M++ G VPN+ T+ AL+ G  +      A+  YH+ML   L P  VT+  L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC  G    A   F  M   G  P+   YN +I   C  G++ +AM +  +M K   
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+V TYN LI G C  G L  A  LL+ M   G+  +  TY  LI G+ + G +E A S
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M E G+ PN VT++++IDG      +D A+ L+ +MV    +P    +  +I G S
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  ++ E      +M++  + P+V T +S I GL +NGR   A   F E   +       
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN----YF 619

Query: 471 PNHVLYAAIIQALCYDGQILKAS--KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           PN   Y+++I  LC +G+   A    L + +      P+  TYTT+++GL    R  +  
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L+  M K G+ P   I + ++ G  +N  ++SA 
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 236/495 (47%), Gaps = 36/495 (7%)

Query: 94  LIKKGKFDSV---WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LI+ GKFD V    + Y +M+  G+   ++T+  +I+  C +G V +A  +   +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P    YT LI G C  + +  A +MF  M + G  PN  TY+ L++G C    +  A++
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EM+   ++P V T+ + +  LC  G    A      M K G  PNI  +  LI G  
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G    A+ L  +M    + P   TYN LI  LC  G+ E A  + + M   G L +  
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN +I  +C  GD++KA+ +  +M + G  PNV+T+++LI G CK GN++ AM L   M
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               L PD   +T LI G S+ G ++    L+  M+E  I+P+  T +++I G F   ++
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 451 SNALNFFLEKTD------------------KTDG-----GYCS--------PNHVLYAAI 479
            +AL  F +  +                  KT+       +C         PN + Y + 
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM--LLADMIKM 537
           I  LC +G+   A K+F +M   N  P+  TY++++ GL +  R  D  M  LLA +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 538 GIVPDAVINQVMVRG 552
           G  P+      +V+G
Sbjct: 654 GCEPNVDTYTTLVKG 668



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 236/476 (49%), Gaps = 11/476 (2%)

Query: 52  PSVFSTLI--IAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V++  I  ++  + G   EA+ +  K++    +P IQ   AL++GL + GKF+     
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGL 364

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y +M+  GLV   VTY  LI+  C +G    A  +F  M+  G  P+   Y  +I   C 
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCL 424

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + +A  +F  M + G  PN+ TYN L+ GYCK  ++N A+     M  + L+P+  T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G  + G+L  A + F  M + G+ PN   Y  +IDG+     + +A++L  +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P   TYN++I G      +  AE    KM K+G+L NV+TY S IDG C+ G   
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI-DAAM-GLYTEMVIKSLVPDVVVFTA 404
            A  +  +M ++   PN+ T+SSLI G C+ G   DA M  L   +      P+V  +T 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+ GL  +G   E  +L   M +  + PS     +L+ G  KN ++ +ALN F       
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
              + S     Y A+I ALC +  I +A  +F  M   +   D   +T +L GLL+
Sbjct: 725 FQLHLSD----YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLK 776



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 213/427 (49%), Gaps = 4/427 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +++ +M++ GI P+++ +  +I+ LC + ++ EA+ +   +      PN +TY +L+ 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G+C+  +++ A   +  M+     PN VT+  L++GLC  G L  A +    M + G+ P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            ++ Y   +   C AG   EA+ L  +M+K    P++ T+  LI GL   G+ E A GL 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM  +G++   VTYN+LI+  C EG  E A ++   M   G  P+  T++ +I   C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G+I  AM ++ +M+     P+V+ +  LI G  K GN+   +RL + M    + P  +T 
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G  + G++ +A + F    +       SPNHV Y AII       ++  A  LF 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHG----ISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M      P + TY  M+ G  +   + +       M+K G++P+ +     + G   NG
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601

Query: 558 DLKSAFR 564
               AF+
Sbjct: 602 RTGLAFK 608



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 212/438 (48%), Gaps = 40/438 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI   S  G  E A+ +Y K+    ++P     NAL+N L  +G+F++ +  +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+  G +    TY  +I C C  GD+ KA+ +FD+M+  G  P V+ Y  LI+G C +
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460

Query: 168 N-----------------------------------KMVEAESMFRSMRECGVVPNLYTY 192
                                               K+  A S+F  M E G+ PN  TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            A++DGY  +A V+ AL  + +M+     P+  T+ V++ G  K   +  A NF   M K
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN+  Y   IDG C+ G    A  +  EMEK    P+++TY+ LI GLC  G+ E 
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640

Query: 313 AE--GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           AE   LL ++   G   NV TY +L+ G C EG   +A  +   M +KG++P+   + +L
Sbjct: 641 AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G+CK   +++A+ ++  M        +  + ALI  L K+  ++E   +++ MLE   
Sbjct: 701 LIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 431 TPSVFTVSSLIHGLFKNG 448
                  + L+ GL K G
Sbjct: 761 NSDEVAWTVLLDGLLKEG 778



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 212/440 (48%), Gaps = 5/440 (1%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           ++I  C  +G+V +      E+  K     T+  +T L+  L   + +  A  M+  M  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+ P+L T+N +++  CK   V  A      +  ++  PN  T+  L+ G C+   L  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M K G  PN   Y+ LI+G C  G L EAM +  EM +  I P V+TY I + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            LC  G    A  LL KM K G + N+ T+ +LI G  ++G  E A+ +  +M   G+ P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
             VT+++LI+  C  G  + A  ++  M+    +P    +  +I      G++++ + ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +ML+A  +P+V T ++LI+G  K G ++NA+       +   G    P+   Y  +I  
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL----EIMKGNGLKPDAWTYTELISG 491

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
               G++  A+ LF  M    + P++ TYT ++ G     ++ D + L   M++ G +P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 543 AVINQVMVRGYQENGDLKSA 562
           +    VM+ G+ +   +  A
Sbjct: 552 SQTYNVMISGFSKTNSISEA 571



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 163/364 (44%), Gaps = 18/364 (4%)

Query: 40  NALNSLEIPKFN-----PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           NA+  LEI K N        ++ LI  FS  G +E A  ++  +    + P      A++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G     K D     + +MV  G +    TY V+I        + +A N   +M+ +G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P V+ YT  I GLC   +   A  +F  M +    PNLYTY++L+ G C+      A E 
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EM 643

Query: 212 YH---EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           Y+    + H+  +PNV T+  L+ GLC  G    A    V M K G+ P+  +Y  L+ G
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK   +  A+++   M+       +  Y  LI  LC    +E A+ + Q M ++   ++
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS------SLIDGQCKAGNIDA 382
            V +  L+DG  KEG+ +  L +   M  +    N  T+       S +D   K   I  
Sbjct: 764 EVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQ 823

Query: 383 AMGL 386
            +G+
Sbjct: 824 QLGI 827


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 266/515 (51%), Gaps = 12/515 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           LN+ + P+   SV  F+ LI  +   G I  A+ +   ++     P I   N L+NG  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G   +  +   E+ L  L  +V+TY  LID  C    +  AL ++DEM  K + P VV 
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT +++GLC   K+ EA+S+FR M E GVVPN ++Y  L+D   K  +V  A      M+
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  +VV +  LMDGL K G    A + F  + +  + PN   Y+ LIDGHCK G++ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +   L  EME+  I P+V  Y+ ++ G    G L  A  +++KM +  IL NV  Y +LI
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY K      AL +  +M  +G+E N     S ++   ++G ++ A  L+ +M+ + L+
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI-SNALN 455
           PD V +T+++DG  K G   +   + +EM E      V   + LI+GLFK G+  S + +
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             + +         +P+   +  +I A C +G +  A KL ++M+S  L+P++ T   ++
Sbjct: 425 TGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + L  A  +   M LL DM+ MG  P    ++ ++
Sbjct: 479 QRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 264/566 (46%), Gaps = 37/566 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           +  + +    P+V  ++TLI A+ +   +E+AL++Y ++ V   +P +     ++NGL K
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            GK +     + EM   G+V +  +Y  LID    +G+V +A  L   M+ +GI   VV+
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT L+ GL        AE MF+ + E  +VPN  TY+AL+DG+CK+ DVN+      EM 
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             ++ PNV+ +  ++DG  K G L  A +    M +  + PN+FVY  LIDG+ KA    
Sbjct: 255 EKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRG 314

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A+ L  EM+   +  + F  +  +  L   G++E A+ L + M   G+L + V Y S++
Sbjct: 315 IALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ K G    A ++  +MTEK    +VV ++ LI+G  K G  ++    +T M    L 
Sbjct: 375 DGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLA 433

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   F  +I+   K+GN+   L+L  EM    + P+  T + L+  L   G I   ++ 
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 457 F-------------------------------LEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                                           L   D+  G     +   Y  +I   C 
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G I +A+ +F DM    +  D  TY  ++ G   +  +     + + M+  G+ P+   
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
             +++ G      +K A      +KE
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKE 639



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 209/384 (54%), Gaps = 4/384 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L+DGYC+  +++RA+E    M      P++VT+  LM+G CK+G+L  A      ++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              + PN+  Y  LID +CK+  L +A+ +  EM    + PDV TY  ++ GLC  G++E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ + ++M + G++ N  +Y +LID   KEG++ +A  +  +M  +G+  +VV +++L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  KAG  + A  ++  ++ +SLVP+ V ++ALIDG  K G++ +   L +EM E  I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V   SS++ G  K G ++ A++   +   +       PN  +Y  +I       Q   
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN----ILPNVFVYGTLIDGYFKADQRGI 315

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  LF +M+S  L  +N    + +  L R+ RM +   L  DM+  G++PD V    M+ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 552 GYQENGDLKSAFRCSEFLKESRIG 575
           G+ + G    AF  ++ + E   G
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSG 399



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 249/506 (49%), Gaps = 8/506 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI    ++G + +   + +++E   + P +   +++++G  KKG  +   +  
Sbjct: 226 NCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVM 285

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV   ++ +V  YG LID          AL+LF EM  +G+E    +    ++ L   
Sbjct: 286 RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA+ +F+ M   G++P+   Y ++MDG+ K    + A     EM   +   +VV +
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++GL K+G+  +  +F   M + G+ P+   +N +I+ +CK GNL  A+ L +EM+ 
Sbjct: 406 NVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           + + P+  T NIL++ LC  G++E    LL  M   G      T+ +++D   K    + 
Sbjct: 465 YGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADV 524

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            L    Q+   GV+ ++ T+++LI   C+ G I  A  ++ +M+ K ++ D++ + ALI 
Sbjct: 525 ILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G     ++K+   ++ +ML   ++P+V T + L+ GL     I  A     +  ++    
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG--- 641

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN   Y  ++      G + +  KL+ +M +    P   TY  ++    + K+M   
Sbjct: 642 -LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGY 553
             L+ +M   GI P++    +++ G+
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGW 726



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 211/414 (50%), Gaps = 16/414 (3%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++++  F + G   +A  + +++    +   + A N L+NGL K GK++S   F+  M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-ESFHTGMR 428

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D  T+  +I+  C +G++  AL L +EM   G++P  +   IL+  LC   ++ 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   M   G  P   T+ A++D   K    +  L  + +++   ++ ++ T+  L+
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLI 548

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C++G +R A   F  M   G+  +I  YN LI G+C + +L +A ++ S+M    +S
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V TYNIL+ GL     ++ A GL+ +M + G++ N  TY+ L+ G+ K G+M++ + +
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG--- 408
             +M  KG  P   T++ LI    K   +  A  L  EM ++ + P+   +  LI G   
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728

Query: 409 LSKDGNMKETL---------RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           LSK   + ++L         RL++EM E    P   T++ +   L K G+ ++A
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADA 782



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 15/254 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K + S ++TLI  F  +G I  A  V++ +    +L  I   NAL++G          + 
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M+  G+  +V TY +L+        + +A  L ++M ++G+ P    Y IL+ G  
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               M E   ++  M   G VP   TYN L+  + K   +++A E   EM    + PN  
Sbjct: 658 KIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSS 717

Query: 226 TFGVLMDG---LCKVGELRA---------AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           T+ +L+ G   L K  EL           A   F  M + G  P      C+     K G
Sbjct: 718 TYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPG 777

Query: 274 NLFEAMSLCSEMEK 287
              +A  + +++ K
Sbjct: 778 KKADAQRILNKLYK 791



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           +I  SV   + LI G  +NG IS A+     +  KT+G   +P+ V Y  ++   C  G 
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELL--EGMKTEGP--APDIVTYNTLMNGFCKIGD 67

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +  A KL  ++   NL P+  TYTT++    +++ + D + +  +M    +VPD V    
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 549 MVRGYQENG---DLKSAFRCSE--------FLKESRIGSSETEGHTTRSFL 588
           ++ G  ++G   + KS FR  E        F   + I S   EG+   +F+
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 267/544 (49%), Gaps = 31/544 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK-----KGKFDS 102
           +P +F++L+ A+   G    A  + +K+      P     N L+ G+       K   D 
Sbjct: 111 SPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDL 170

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             + Y EM+  G+V + V       C CG G   KA N+  EM+ KG  P    Y+ +I 
Sbjct: 171 AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LCN +K+ +A  +F+ M+  G+ P++Y Y  L+D +CK   + +A  ++ EM      P
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+  L+    K  ++  A   +  M   G  PNI  Y  LIDG CKAG + +A  + 
Sbjct: 291 NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIY 350

Query: 283 SEMEKFEI-----------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
             M+K  +                  P+VFTY  L+ GLC   Q++ A  LL+ M  EG 
Sbjct: 351 KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V Y++LIDG CK G +++A  V + M E G +PNV T+SSLID   K   +D A+ 
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+  S  P+VV++T +IDGL K G   E  +L   M E    P+V T +++I G  
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG 530

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K+GR+   L    + + K     C+PN V Y  +I   C  G + +A KL  +M+     
Sbjct: 531 KSGRVEKCLELLQQMSSKG----CAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWP 586

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
                Y  ++ G  R    +  + L  ++ +   VP A + +V++  + + G L+ A   
Sbjct: 587 RHVAGYRKVIEGFNR--EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644

Query: 566 SEFL 569
           +E L
Sbjct: 645 NEEL 648



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 173/570 (30%), Positives = 263/570 (46%), Gaps = 33/570 (5%)

Query: 32  HHVCYS--VFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAI 84
           H +C S     AL+ LE  +F P   +++ +I    E    EEA   L   R    LP +
Sbjct: 18  HSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNV 77

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                LL G + K K          M+  G       +  L+   C  GD   A  L  +
Sbjct: 78  LTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKK 137

Query: 145 MIDKGIEPTVVIYTILIHGLCNENK-----MVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           M+  G +P  V+Y ILI G+C+  +     +  AE  +  M E GVV N    +      
Sbjct: 138 MVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCL 197

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C +    +A     EM+     P+  T+  ++  LC   ++  A   F  M + G+ P++
Sbjct: 198 CGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDV 257

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           +VY  LID  CKAG + +A +   EME+   +P+V TY  LI       ++  A  + + 
Sbjct: 258 YVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEM 317

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE-----------------P 362
           M  +G   N+VTY +LIDG CK G +EKA  +   M ++ VE                 P
Sbjct: 318 MLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEP 377

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           NV T+ +L+DG CKA  +  A  L   M ++   P+ VV+ ALIDG  K G + E   ++
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             MLE    P+V+T SSLI  LFK+ R+  AL    +  + +    C+PN V+Y  +I  
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS----CAPNVVIYTEMIDG 493

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G+  +A KL   M      P+  TYT M+ G  ++ R+   + LL  M   G  P+
Sbjct: 494 LCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPN 553

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            V  +V++      G L  A +  E +K++
Sbjct: 554 FVTYRVLINHCCSTGLLDEAHKLLEEMKQT 583



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 251/528 (47%), Gaps = 35/528 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N S FS  +     +G  E+A  V R++     +P     + ++  L    K +  ++
Sbjct: 187 KVNISNFSRCLCG---IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM   G+  DV  Y  LID  C  G + +A N FDEM   G  P VV YT LIH   
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ---- 221
              K+ +A  ++  M   G  PN+ TY AL+DG CK   + +A + Y  M   N++    
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363

Query: 222 -------------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
                        PNV T+G L+DGLCK  +++ A +    M+  G  PN  VY+ LIDG
Sbjct: 364 DMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG L EA  + + M +    P+V+TY+ LI  L    +L+ A  +L KM +     N
Sbjct: 424 CCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPN 483

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV Y  +IDG CK G  ++A  +   M EKG  PNVVT++++IDG  K+G ++  + L  
Sbjct: 484 VVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQ 543

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M  K   P+ V +  LI+     G + E  +L +EM +      V     +I G  +  
Sbjct: 544 QMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF 603

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP-- 506
             S  L+F + + D        P   +Y  +I      G++  A +L  ++ S    P  
Sbjct: 604 IASLYLSFEISENDSV------PVAPVYRVLIDNFIKAGRLEIALELNEELSS--FSPFS 655

Query: 507 --DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             +   + T++  L  A +      L ADMI  G +P+  I   +++G
Sbjct: 656 AANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKG 703



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 213/444 (47%), Gaps = 30/444 (6%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           N  + +E     P+V  ++ LI A+ +   + +A  VY  +      P I    AL++GL
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 95  IKKGKFDSVWEFYEEM---------------VLCGLV--ADVVTYGVLIDCCCGQGDVMK 137
            K GK +   + Y+ M               V+ G     +V TYG L+D  C    V +
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +L   M  +G EP  V+Y  LI G C   K+ EA+ +F +M ECG  PN+YTY++L+D
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
              K   ++ AL+   +ML ++  PNVV +  ++DGLCKVG+   A    V M + G  P
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  +IDG  K+G + + + L  +M     +P+  TY +LI   C  G L+ A  LL
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M +     +V  Y  +I+G+ +E     +L +  +++E    P    +  LID   KA
Sbjct: 578 EEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEISENDSVPVAPVYRVLIDNFIKA 635

Query: 378 GNIDAAMGLYTEMVIKSLVP----DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           G ++ A+ L  E+   S  P    +  +   LI+ LS      +   LY +M+     P 
Sbjct: 636 GRLEIALELNEEL--SSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPE 693

Query: 434 VFTVSSLIHGLFKNGRISNALNFF 457
           +  +  LI GL +  R   AL   
Sbjct: 694 LSILVHLIKGLLRVNRWEEALQLL 717



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 48/368 (13%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T G     LCK G+ R A +    + K    P+  +Y  +I G C+A    EAM   + M
Sbjct: 12  TLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRM 68

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P+V TY IL+ G     +L   + +L  M  EG   +   +NSL+  YC+ GD 
Sbjct: 69  RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDY 128

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA---------------------------- 377
             A  +  +M + G +P  V ++ LI G C +                            
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188

Query: 378 ------------GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
                       G  + A  +  EM+ K  +PD   ++ +I  L     +++  +L++EM
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
               I P V+  ++LI    K G I  A N+F    D+ +   C+PN V Y A+I A   
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF----DEMERDGCAPNVVTYTALIHAYLK 304

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-VPDAV 544
             ++ KA++++  M S    P+  TYT ++ GL +A ++     +   M K  + +PD  
Sbjct: 305 SRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVD 364

Query: 545 INQVMVRG 552
           ++  +V G
Sbjct: 365 MHFRVVDG 372



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 12/318 (3%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M+  G   + F   C     CK+G   EA+SL   +EK E  PD   Y  +I GLC    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASL 57

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            E A   L +M     L NV+TY  L+ G   +  + +   + S M  +G  P+   F+S
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL-SKDGNMKETLRL----YKE 424
           L+   C++G+   A  L  +MV     P  VV+  LI G+ S +   K+ L L    Y E
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           MLEA +  +   +S+    L   G+   A N   E   K   G+  P+   Y+ +I  LC
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK---GFI-PDTSTYSKVIGYLC 233

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              ++ KA +LF +M+ + + PD   YTT++    +A  +        +M + G  P+ V
Sbjct: 234 NASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293

Query: 545 INQVMVRGYQENGDLKSA 562
               ++  Y ++  +  A
Sbjct: 294 TYTALIHAYLKSRKVSKA 311


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/504 (33%), Positives = 247/504 (49%), Gaps = 61/504 (12%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    K +  +  ++EM + G+  DV TY +LID  C  G + +A  
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF+EM   G  PTVV YT LIH      ++ +A  +F  M + G  PN  TY AL+DG C
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 201 KVADVNRALEFYHEML----------------HHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++++A E Y +++                 H L PNVVT+G L+DGLCK  ++  A 
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  PN  VY+ LIDG CKAG +  A  +  +M K    P V TY  LI  +
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G+L+ A  +L +M K+    NVVTY ++IDG C+ G+ EKAL + S M EKG  PNV
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD----------GN 414
           VT+++LIDG  KAG ID ++ L+T+M  K   P+ V +  LI+ L             G 
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644

Query: 415 MKET-----------------------LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           MK+T                       L + +EM      P       LI    K GR+ 
Sbjct: 645 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704

Query: 452 NALNFFLEKTD-----KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            A+    E  +     KTD         +YA++IQALC   Q+ +A +L+S+M      P
Sbjct: 705 IAMELHKEMMEVPSSVKTDND-------MYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757

Query: 507 DNCTYTTMLRGLLRAKRMLDVMML 530
           +   +  +++GL+  K+  + + L
Sbjct: 758 ELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 245/550 (44%), Gaps = 31/550 (5%)

Query: 40  NALNSLEIPKFN-PSVFST-LIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL 94
           +AL+ +E   F   +V  T +I    E  + +EA+    ++     +P +     LL+G 
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           +KK +          M+  G   +   +  L+   C + D   A  L + M   G  P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           V+Y I I  +C + K+        AE ++  M     V N           C V   ++A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM+     P+  T+  ++  LC   ++  A   F  M   GV P+++ Y  LID 
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A  L  EM     SP V TY  LI       Q+  A  +  +M   G   N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMT----------------EKGVEPNVVTFSSLID 372
            VTY +L+DG CK G++ KA  V +++                    + PNVVT+ +L+D
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKA  +D A  L   M+     P+ +V+ ALIDG  K G +     ++ +M +    P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T +SLI  +FK+GR+  A+    +    +    C+PN V Y A+I  LC  G+  KA
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS----CTPNVVTYTAMIDGLCRIGESEKA 568

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            KL S M      P+  TYT ++ GL +A ++   + L   M + G  P+ V  +V++  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 553 YQENGDLKSA 562
               G L  A
Sbjct: 629 LCAAGLLDKA 638



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 235/527 (44%), Gaps = 29/527 (5%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C  +++GL++   FD    F   M     + +VVTY  L+     +  +     + + M+
Sbjct: 110 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 169

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV- 205
            +G  P   ++  L+H  CNE     A  +   M  CG  P    YN  +   C    + 
Sbjct: 170 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP 229

Query: 206 -----NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A + Y EML  N   N V        LC VG+   A      M + G  P+  
Sbjct: 230 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 289

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +I   C A  + +A  L  EM+   ++PDV+TY ILI   C  G +E A+ L ++M
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G    VVTY +LI  Y K   + +A  +  +M + G  PN VT+ +L+DG CKAGNI
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 381 DAAMGLYTEMVIKS----------------LVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             A  +Y +++  S                L P+VV + AL+DGL K   +     L   
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML +   P+     +LI G  K G+I +A   FL+    T  GY    H  Y ++I  + 
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ---MTKCGYLPSVHT-YTSLIDRMF 525

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            DG++  A K+ S M  D+  P+  TYT M+ GL R       + LL+ M + G  P+ V
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
               ++ G  + G +  +     F + SR G S     T R  + HL
Sbjct: 586 TYTALIDGLGKAGKIDLSL--DLFTQMSRKGCSPNY-VTYRVLINHL 629



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 222/547 (40%), Gaps = 64/547 (11%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+    NAL+  L   G+ D  +   +EM   G   D  T G      C +G    AL++
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +    +  +   V+ T +I GL   +   EA S    MR    +PN+ TY  L+ G+ K
Sbjct: 98  IER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +       + M+     PN   F  L+   C   +   A      M   G  P   V
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 262 YNCLIDG-----------------------------------------HCKAGNLFEAMS 280
           YN  I                                            C  G   +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  EM +    PD  TY+ +I  LC   ++E A  L Q+M   G+  +V TY  LID +C
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K G +E+A  +  +M   G  P VVT+++LI    KA  +  A  ++  MV     P+ V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 401 VFTALIDGLSKDGNMKETLRLYKEML----------------EAKITPSVFTVSSLIHGL 444
            + AL+DGL K GN+ +   +Y +++                   + P+V T  +L+ GL
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  ++ +A     E  D      C PNH++Y A+I   C  G+I  A ++F  M     
Sbjct: 455 CKAHKVDHA----HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P   TYT+++  + +  R+   M +L+ M+K    P+ V    M+ G    G+ + A +
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 570

Query: 565 CSEFLKE 571
               ++E
Sbjct: 571 LLSLMEE 577



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 166/406 (40%), Gaps = 17/406 (4%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +++ G  P+  TYNAL+        V+       EM       +  T G     LCK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A +  +    F +  +  +   +I G  +A    EAMS    M      P+V TY  
Sbjct: 91  WADALD-MIEREDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ G     QL   + ++  M  EG   N   +NSL+  YC E D   A  + ++MT  G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 360 VEPNVVTFSSLIDGQCKAGN------IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
             P  V ++  I   C          +D A  +Y EM+  + V + V        L   G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
              +  +L KEM+     P   T S +I  L    ++  A   F E   K  G   +P+ 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM--KMVG--VTPDV 323

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I + C  G I +A  LF +MRS    P   TYT ++   L+AK++     +   
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           M+  G  P+ V    +V G  + G++  AF     L    IG+S++
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDS 425



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 136/307 (44%), Gaps = 7/307 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+  LI  F + G I+ A  V+    K   LP++    +L++ + K G+ D   +  
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+      +VVTY  +ID  C  G+  KAL L   M +KG  P VV YT LI GL   
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  +  +F  M   G  PN  TY  L++  C    +++A     EM        +  +
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              + G  K     A+      M  +G  P   VY  LID   KAG L  AM L  EM +
Sbjct: 658 RCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 288 F--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               +  D   Y  LI+ LC   Q+E A  L  +M + G +  +  +  LI G  +    
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 346 EKALSVC 352
           ++AL +C
Sbjct: 776 DEALQLC 782



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID--KGIEPTVVIYTILIHGLC 165
           EEM   G V     YG+LIDC    G +  A+ L  EM++    ++    +Y  LI  LC
Sbjct: 676 EEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALC 735

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF----YHE---MLHH 218
             +++ EA  ++  M   G VP L  +  L+ G  +V   + AL+      HE   +L +
Sbjct: 736 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSY 795

Query: 219 NLQPNVVTFGVLMDGLCK 236
             Q  + TF V++ G  K
Sbjct: 796 TTQIFLFTFVVIVVGYGK 813


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 251/517 (48%), Gaps = 40/517 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   +++GL  +G+       + EMV  G+V +VVTY  ++   C    + KA  +
Sbjct: 270 PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELV 329

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M D  I+P  V YT +IHG     +  EA  MF+ M   G++P++ T+N+LMD  CK
Sbjct: 330 LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCK 389

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A E +H +     +P+++++ +L+ G    G      N F  M   G+  +   
Sbjct: 390 HKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC 449

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LI+ H K G + EA+ + +EM    +SP+V TY  +I  LC +G+L  A   L +M 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV--------------------- 360
             G+  N V Y+SLI G+C  GD+ KA  + S+M ++G+                     
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 361 ---------------EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                           P++ TF+SLIDG C  G +D A G+   MV     PDVV ++ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  K G + + L L++EML  ++ P+  T S ++ GLF+ GR S A   F E  +   
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               S     Y  I+Q LC +    +A  LF  + + NL+ +     TM+  L + KR  
Sbjct: 690 AMSIST----YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   L A +   G+VP+A    VM+    + G ++ A
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEA 782



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 266/516 (51%), Gaps = 8/516 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++++ A  +   +++A  V R++    + P      A+++G    G++    + +
Sbjct: 306 NVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMF 365

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL+ D+VT+  L+D  C      +A  +F  +  KG +P ++ Y+IL+HG   E
Sbjct: 366 KEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATE 425

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            + V+  ++F SM + G+V + + +N L++ + K   ++ AL  + EM    + PNVVT+
Sbjct: 426 GRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTY 485

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC++G L  A      M   G+ PN  VY+ LI G C  G+L +A  L SEM  
Sbjct: 486 ATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMD 545

Query: 288 FEIS-PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             I  P++  ++ +I  LC  G++  A+ +   +   G   ++ T+NSLIDGYC  G M+
Sbjct: 546 QGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMD 605

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  V   M   G EP+VVT+S+LI+G  K+G ID  + L+ EM+ K + P  V ++ ++
Sbjct: 606 KAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVL 665

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL + G      +++ EM+E+    S+ T + ++ GL +N     A+  F     K   
Sbjct: 666 DGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLF----HKLGA 721

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                   +   +I AL    +  +A  LF+ + +  L P+  TY  M+  LL+   + +
Sbjct: 722 MNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEE 781

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             ++ + M K G  P + +   ++R   + G++  A
Sbjct: 782 ADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 234/454 (51%), Gaps = 12/454 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVE 172
           G V D  +Y  +I   CG     +AL++   M    G  P VV YT++IHGL  E ++ +
Sbjct: 231 GCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISK 290

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A ++F  M + GVVPN+ TYN+++   CK   +++A     +M  +++QP+ VT+  ++ 
Sbjct: 291 ACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIH 350

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G   +G  + A   F  M + G+ P+I  +N L+D  CK     EA  +   +      P
Sbjct: 351 GYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKP 410

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D+ +Y+IL+ G    G+      L   M   GI+A+   +N LI+ + K G M++AL + 
Sbjct: 411 DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIF 470

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  +GV PNVVT++++I   C+ G +  AM   ++M+   L P+ VV+ +LI G    
Sbjct: 471 TEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTH 530

Query: 413 GNMKETLRLYKEMLEAKIT-PSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGY 468
           G++ +   L  EM++  I  P++   SS+IH L   GR+ NA    N  +   D+     
Sbjct: 531 GDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR----- 585

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+   + ++I   C  G++ KA  +   M S    PD  TY+T++ G  ++ R+ D +
Sbjct: 586 --PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +L  +M+   + P  V   +++ G    G   +A
Sbjct: 644 ILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 226/448 (50%), Gaps = 7/448 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM-F 177
           V TYG+L+DCCC           F  ++  G+    ++    +  LC   +  EA SM  
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCK 236
             M E G VP+ ++YN ++   C  +    AL+    M   +   P+VV++ +++ GL  
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            GE+  A N F  M + GV PN+  YN ++   CKA  + +A  +  +M    I PD  T
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  +I G   +G+ + A  + ++M +EG++ ++VT+NSL+D  CK    ++A  +   + 
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            KG +P+++++S L+ G    G       L+  M    +V D   F  LI+  +K G M 
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E L ++ EM    ++P+V T +++I  L + GR+++A    +EK  +       PN V+Y
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA----MEKLSQMISIGLKPNTVVY 520

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
            ++IQ  C  G ++KA +L S+M    + RP+   +++++  L    R+++   +   +I
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVI 580

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +G  PD      ++ GY   G +  AF
Sbjct: 581 HIGDRPDIFTFNSLIDGYCLVGKMDKAF 608



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 191/394 (48%), Gaps = 40/394 (10%)

Query: 208 ALEFYHEMLHHNLQPNVV-----TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
           A+  ++ +      P VV     T+G+LMD  C+         FF  + + G+  +  V 
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 263 NCLIDGHCKAGNLFEAMS-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           N  +   C A    EA+S L   M +    PD F+YN +IK LCG  + + A  +L +M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 322 K-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           K +G   +VV+Y  +I G   EG++ KA ++ ++M +KGV PNVVT++S++   CKA  +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  +  +M   S+ PD V +TA+I G S  G  KE  +++KEM    + P + T +SL
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 441 IHGLFKNGRISNALNFFLEKTDK--------------------------------TDGGY 468
           +  L K+ R   A   F     K                                TD G 
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            + +H  +  +I A    G + +A  +F++MR   + P+  TY T++  L R  R+ D M
Sbjct: 444 VADSHC-FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAM 502

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L+ MI +G+ P+ V+   +++G+  +GDL  A
Sbjct: 503 EKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 188/378 (49%), Gaps = 2/378 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+N   K+G  D     + EM   G+  +VVTY  +I   C  G +  A+    +MI 
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVADVN 206
            G++P  V+Y  LI G C    +++A+ +   M + G+  PN+  +++++   C    V 
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A + ++ ++H   +P++ TF  L+DG C VG++  A      M   G  P++  Y+ LI
Sbjct: 571 NAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ K+G + + + L  EM    + P   TY++++ GL   G+   A+ +  +M + G  
Sbjct: 631 NGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTA 690

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            ++ TY  ++ G C+    ++A+++  ++    ++  +   +++I    K    + A  L
Sbjct: 691 MSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDL 750

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           +  +    LVP+   +  +I  L K+G+++E   ++  M +    PS   ++ +I  L +
Sbjct: 751 FASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQ 810

Query: 447 NGRISNALNFFLEKTDKT 464
            G I  A  +++ K D T
Sbjct: 811 KGEIVKA-GYYMSKVDGT 827



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 185/407 (45%), Gaps = 41/407 (10%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI A ++ G ++EAL ++ ++    V P +     ++  L + G+     E   +M+
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKM 170
             GL  + V Y  LI   C  GD++KA  L  EM+D+GI  P +  ++ +IH LCNE ++
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 171 VEAESMFR-----------------------------------SMRECGVVPNLYTYNAL 195
           + A+ +F                                    +M   G  P++ TY+ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++GY K   ++  L  + EML   ++P  VT+ +++DGL + G   AA   F  M + G 
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +I  Y  ++ G C+     EA++L  ++    +  ++   N +I  L  V + E A  
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHD 749

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L   +   G++ N  TY  +I    KEG +E+A  + S M + G  P+    + +I    
Sbjct: 750 LFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLL 809

Query: 376 KAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLSKDGNMKETLRL 421
           + G I  A G Y   V  +++  +    + LI   +  G  +E ++ 
Sbjct: 810 QKGEIVKA-GYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 152/459 (33%), Positives = 244/459 (53%), Gaps = 7/459 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           + N    + LI  F  +G +  +  V  KI  L   P     N L+ GL  KG+      
Sbjct: 42  RANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLH 101

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F++++V  G   D V+YG L++  C  G+   A+ L   + D+   P VV+Y  +I GLC
Sbjct: 102 FHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLC 161

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  + EA  ++  M   G+ P+  TY  L+ G+C +  +  A     EM+  N+ P V 
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVY 221

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            + +L++ LCK G ++ A N    M K G+ P +  Y+ L+DG+C  G +  A  +   M
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  ++P+V++YNI+I GLC   +++ A  LL++M  + ++ + VTYNSLIDG CK G +
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL++ ++M  +G   +VVT++SL+D  CK  N+D A  L+ +M  + + P +  +TAL
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDGL K G +K    L++ +L       V+T + +I GL K G    AL     K+   D
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI---KSKMED 458

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            G C PN V +  II++L    +  KA KL  +M +  L
Sbjct: 459 NG-CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 246/477 (51%), Gaps = 4/477 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N +L  L K  ++ +     ++M + G+ A+ VT  +LI+C C  G +  + ++
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P  +    L+ GLC + ++ ++      +   G   +  +Y  L++G CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   A++    +   + +PNVV +  ++DGLCK   +  A + +  M   G+FP+   
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI G C  G L  A SL  EM    I+P V+ YNILI  LC  G ++ A+ LL  M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           KEGI   VVTY++L+DGYC  G+++ A  +   M + GV PNV +++ +I+G CK   +D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L  EM+ K++VPD V + +LIDGL K G +   L L  EM        V T +SL+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A   F++  ++       P    Y A+I  LC  G++  A +LF  +  
Sbjct: 368 DALCKNQNLDKATALFMKMKERG----IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 423

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
                D  TYT M+ GL +     + + + + M   G +P+AV  ++++R   E  +
Sbjct: 424 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 480



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 267/509 (52%), Gaps = 10/509 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEM 110
           F+ ++ + ++M     A+ + +++EV   I+A     N L+N     G+    +    ++
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEV-KGIRANFVTLNILINCFCHLGQMAFSFSVLGKI 71

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   D +T   L+   C +G+V K+L+  D+++ +G +   V Y  L++GLC   + 
Sbjct: 72  LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGET 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  + R + +    PN+  YN ++DG CK   VN A + Y EM    + P+ +T+  L
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C +G+L  A +    M    + P +++YN LI+  CK GN+ EA +L + M K  I
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P V TY+ L+ G C VG+++ A+ +   M + G+  NV +YN +I+G CK   +++A++
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  K + P+ VT++SLIDG CK+G I +A+ L  EM  +    DVV +T+L+D L 
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+ N+ +   L+ +M E  I P+++T ++LI GL K GR+ NA   F     K     C 
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG----CC 427

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            +   Y  +I  LC +G   +A  + S M  +   P+  T+  ++R L           L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 531 LADMIKMG-IVPDAVINQVMVRGYQENGD 558
           L +MI  G +V D  +  V V+   +  +
Sbjct: 488 LHEMIAKGLLVLDFKVADVFVQNENDKAE 516



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/454 (32%), Positives = 239/454 (52%), Gaps = 4/454 (0%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+L      ++ +  ++         + A++L  +M  KGI    V   ILI+  C+  +
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M  + S+   + + G  P+  T N LM G C   +V ++L F+ +++    Q + V++G 
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GLCK+GE R A      +      PN+ +YN +IDG CK   + EA  L SEM+   
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PD  TY  LI G C +GQL GA  LL +M  + I   V  YN LI+  CKEG++++A 
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ + MT++G++P VVT+S+L+DG C  G +  A  ++  MV   + P+V  +  +I+GL
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   + E + L +EML   + P   T +SLI GL K+GRI++ALN   E   +      
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ---- 356

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             + V Y +++ ALC +  + KA+ LF  M+   ++P   TYT ++ GL +  R+ +   
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L   ++  G   D     VM+ G  + G    A 
Sbjct: 417 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 187/388 (48%), Gaps = 4/388 (1%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P +  +N ++    K+     A+    +M    ++ N VT  +L++  C +G++  + + 
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              + K G  P+    N L+ G C  G + +++    ++       D  +Y  L+ GLC 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           +G+   A  LL+ +       NVV YN++IDG CK+  + +A  + S+M  +G+ P+ +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++LI G C  G +  A  L  EM++K++ P V ++  LI+ L K+GN+KE   L   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +  I P V T S+L+ G    G + NA   F            +PN   Y  +I  LC  
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG----VNPNVYSYNIMINGLCKC 303

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            ++ +A  L  +M   N+ PD  TY +++ GL ++ R+   + L+ +M   G   D V  
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRI 574
             ++    +N +L  A      +KE  I
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGI 391


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 45/555 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + N  + + L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     
Sbjct: 143 RVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQAD 202

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   DVV Y  +ID    +GDV KA +LF EM+ +GI P  V Y+ ++H
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M   GV+PN +TYN L+ GY        A+  + EM  H++ P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +VVT  +LM  LCK G+++ A + F  MA  G  PN+F Y  +++G+   G L +   L 
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF 382

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M    I+PD++T+N+LIK     G L+ A  +  +M   G+  +VVTY ++I   C+ 
Sbjct: 383 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442

Query: 343 GDMEKALSVCSQMTEKGVEP-----------------------------------NVVTF 367
           G M+ A+   +QM ++GV P                                   ++V F
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SS+I+  CK G +  A  ++   V   L P  VV++ L+DG    G M++ LR++  M+ 
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+     +L++G  K GRI   L+ F E   K       P+ +LY  II  L   G
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG----IKPSTILYNIIIDGLFEAG 618

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  + CTY  +LRGL + +   + + L  ++  M +  + +   
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678

Query: 548 VMVRGYQENGDLKSA 562
            M+ G  +   ++ A
Sbjct: 679 TMIAGMFQTRRVEEA 693



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 257/512 (50%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVVT  +L+   C  G + +A ++FD M  KG  P V  YTI+++G   +  +
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCL 375

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P++YT+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 376 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + Y+CLI G C  G+L +A  L SE+    +
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  ++ +I  LC +G++  A+ +       G+    V Y+ L+DGYC  G MEKAL 
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPN V + +L++G CK G ID  + L+ EM+ K + P  +++  +IDGL 
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I  +  T + ++ GLFKN                       
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNR---------------------- 653

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ +  T  TM+ G+ + +R+ +   L
Sbjct: 654 -------------CFDEAIF----LFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + + G+VP  V   +M+    + G ++ A
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEA 728



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 237/510 (46%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHR 172

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y+IL+  LC++ K  +A+ + R M E G V  P++  Y+ ++DG+ K 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKE 232

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P+ VT+  ++  LCK   +  A  F   M   GV PN + Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE-------- 314
           N LI G+   G   EA+ +  EM +  I PDV T ++L+  LC  G+++ A         
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 315 ---------------------------GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                                       L   M  +GI  ++ T+N LI  Y   G ++K
Sbjct: 353 KGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + + PD   +  LI 
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ 472

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +   SS+I+ L K GR+ +A N F    D T   
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF----DLTVNV 528

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  V+Y+ ++   C  G++ KA ++F  M S  + P++  Y T++ G  +  R+ + 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  E G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 220/474 (46%), Gaps = 40/474 (8%)

Query: 130 CGQGDVMKALNLFDEMIDKG-----IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           C  G  + A+ LF+    +      + PT   Y IL+      ++   A + F  +   G
Sbjct: 83  CRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 141

Query: 185 VVPNLYTYNALMDGYCKVADVNRALE-FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           +  N+   N L+ G+C+    + AL+   H        P+V ++ +L+  LC  G+   A
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201

Query: 244 GNFFVHMAKFGVF--PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            +    MA+ G    P++  Y+ +IDG  K G++ +A  L  EM +  I PD  TY+ ++
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC    ++ AE  L++M  +G+L N  TYN+LI GY   G  ++A+ V  +M    + 
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VVT S L+   CK G I  A  ++  M +K   P+V  +T +++G +  G + +   L
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDL 381

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD---KTD--------GGYC- 469
           +  ML   I P ++T + LI      G +  A+  F E  D   K D           C 
Sbjct: 382 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441

Query: 470 -------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
                              +P+   Y  +IQ  C  G +LKA +L S++ ++ +  D   
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +++++  L +  R++D   +    + +G+ P AV+  +++ GY   G ++ A R
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  ++++   L+ G  +     E L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +    +     G  CSP+ V Y+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPDVVAYST 224

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY++++  L +A+ M      L  M+  G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++P+      ++ GY   G  K A R  + ++   I
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 169/545 (31%), Positives = 266/545 (48%), Gaps = 32/545 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW--- 104
           +P +F++L+ A+   G    A  + +K+ +    P     N L+ G+       S+    
Sbjct: 10  SPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIG 69

Query: 105 ---EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                Y EM+  G+V + V       C C  G   KA N+  EM+ KG  P    Y+ +I
Sbjct: 70  LAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVI 129

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LCN +K+ +A  +F+ M+  G+ P++YTY  L+D +CKV  + +A  ++ EM      
Sbjct: 130 GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVVT+  L+    K  +L  A   F  M   G  PNI  Y  LIDGHCKAG   +A  +
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249

Query: 282 CSEMEKFEI-----------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            + M+  ++                  P+V TY  L+ GLC   +++ A  LL+ M  EG
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              N + Y++LIDG+CK G +++A  V ++M   G  PNV T+SSLID   K   +D A+
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            + T+M+  S  P+VV++T ++DGL K G   E  RL   M E    P+V T +++I G 
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF 429

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K GR+   L      T K     C+PN + Y  +I   C  G +  A KL  +M+    
Sbjct: 430 GKAGRVDRCLELLQLMTSKG----CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYW 485

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                 Y  ++ G   +   +  + LLA++ + G VP   + ++++  + + G L+ A  
Sbjct: 486 PKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE 543

Query: 565 CSEFL 569
             E L
Sbjct: 544 LHEEL 548



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 260/536 (48%), Gaps = 27/536 (5%)

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +G  E+A  V R++     +P     + ++  L    K +  ++ ++EM   G+  DV T
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYT 159

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+D  C  G + +A N FDEM   G  P VV YT LIH      K+  A  +F  M 
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL-----------------QPNV 224
             G VPN+ TY AL+DG+CK  +  +A + Y  M +  +                 +PNV
Sbjct: 220 SNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV 279

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+G L+DGLCK  +++ A +    M+  G  PN  +Y+ LIDG CK G L EA  + ++
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK 339

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     SP+V+TY+ LI  L    +L+ A  +L KM +     NVV Y  ++DG CK G 
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            ++A  +   M EKG  PNVVT++++IDG  KAG +D  + L   M  K   P+ + +  
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+     G + +  +L +EM +      +     +I G   +     +L    E ++  
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSE-- 515

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           DG    P   +Y  +I      G++  A +L  ++ S +    N TY +++  L  A ++
Sbjct: 516 DGSV--PILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKV 572

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
                L +DM + G VP+  +   +++G    G  + A + S+ + +  I   + E
Sbjct: 573 DKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDIHWVQQE 628



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 231/486 (47%), Gaps = 27/486 (5%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G     + +  L+   C  GD   A  L  +M+  G +P  V+Y ILI G+C+   
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 170 MVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           +        AE  +  M E GVV N           C +    +A     EM+     P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+  ++  LC   ++  A   F  M + G+ P+++ Y  L+D  CK G + +A +   
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM++   +P+V TY  LI       +L  A  + + M   G + N+VTY +LIDG+CK G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 344 DMEKALSVCSQMTEKGV-----------------EPNVVTFSSLIDGQCKAGNIDAAMGL 386
           + EKA  + ++M    V                 EPNVVT+ +L+DG CKA  +  A  L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              M ++   P+ +++ ALIDG  K G + E   ++ +ML    +P+V+T SSLI  LFK
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           + R+  AL    +  + +    C+PN V+Y  ++  LC  G+  +A +L   M      P
Sbjct: 362 DKRLDLALKVLTKMLENS----CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +  TYT M+ G  +A R+   + LL  M   G  P+ +  +V++      G L  A +  
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 567 EFLKES 572
           E +K++
Sbjct: 478 EEMKQT 483



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 207/426 (48%), Gaps = 23/426 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A+ +   +  A  ++  +     +P I    AL++G  K G+ +   + Y
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250

Query: 108 EEM-----------VLCGLV------ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
             M           +   +V       +VVTYG L+D  C    V +A +L + M  +G 
Sbjct: 251 ARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGC 310

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           EP  +IY  LI G C   K+ EA+ +F  M   G  PN+YTY++L+D   K   ++ AL+
Sbjct: 311 EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALK 370

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +ML ++  PNVV +  ++DGLCKVG+   A    + M + G +PN+  Y  +IDG  
Sbjct: 371 VLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFG 430

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           KAG +   + L   M     +P+  TY +LI   C  G L+ A  LL++M +     ++ 
Sbjct: 431 KAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIG 490

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y  +I+G+  E     +L + ++++E G  P +  +  LID   KAG ++ A+ L+ E+
Sbjct: 491 MYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
              S       + +LI+ L+    + +  +LY +M      P +  +  LI GL + G+ 
Sbjct: 549 SSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKW 607

Query: 451 SNALNF 456
             AL  
Sbjct: 608 EEALQL 613



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 148/343 (43%), Gaps = 35/343 (10%)

Query: 44  SLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
           SLE  + N  ++  LI  F ++G ++EA  V+ K                          
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK-------------------------- 339

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
                 M+  G   +V TY  LID       +  AL +  +M++    P VVIYT ++ G
Sbjct: 340 ------MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDG 393

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   K  EA  +   M E G  PN+ TY A++DG+ K   V+R LE    M      PN
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            +T+ VL++  C  G L  A      M +     +I +Y  +I+G   +     ++ L +
Sbjct: 454 FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLA 511

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E+ +    P +  Y +LI      G+LE A  L +++      A   TY SLI+      
Sbjct: 512 ELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSA-AYQNTYVSLIESLTLAC 570

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            ++KA  + S MT +G  P +     LI G  + G  + A+ L
Sbjct: 571 KVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  EG   + + +NSL+  YC+ GD   A  +  +M   G +P  V ++ LI G C   +
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 380 IDA--AMGL----YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           + +   +GL    Y EM+   +V + V        L   G  ++   + +EM+     P 
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T S +I  L    ++  A   F E   K +G   +P+   Y  ++   C  G I +A 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEM--KRNG--ITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             F +M+ D   P+  TYT ++   L+ +++     +   M+  G VP+ V    ++ G+
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            + G+ + A +    +K  ++
Sbjct: 238 CKAGETEKACQIYARMKNDKV 258


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 252/511 (49%), Gaps = 6/511 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++T++  +   G IE+A  +   +   P     N L+  L  +G+       +++M+  
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHR 191

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    VVTY +L+D  C      +A+ L DEM  KG EP +V Y +LI+ +CNE  + EA
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 251

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            ++   +   G  P+  TY  ++   C         E + EM  +   P+ VTF  ++  
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G +  A     HM++ G  P+I  Y+ ++DG C  G + +A+ L S ++ +   PD
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
              Y  ++KGLC + Q E AE L+ +M       + VT+N++I   C++G +++A+ V  
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM+E G  P++VT++S+IDG C    ID AM L + +      PD+V F  L+ GL    
Sbjct: 432 QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVD 491

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
             ++  +L   M+ +   P   T +++I  L + G +  A+     K    +G  C PN 
Sbjct: 492 RWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL--KIMAENG--CIPNQ 547

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  ++ AL   G+  +A KL S M   N  PD  TY T++  + +A +M + + LL  
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRV 605

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M+  G+ PD +  + +  G         A R
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIR 636



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 233/487 (47%), Gaps = 15/487 (3%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCG-----LVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           L  LI++ + D      + +   G     L   VV   +LI   C  G V  A  +F  +
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
              G   TVV Y  +++G C   ++ +A  +   M      P+ +T+N L+   C    V
Sbjct: 125 ---GASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRV 178

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL  + +MLH    P+VVT+ +L+D  CK    R A      M   G  P+I  YN L
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I+  C  G++ EA+++ S++      PD  TY  ++K LCG  + +  E L  +M     
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             + VT+N+++   C++G +++A+ V   M+E G  P++VT+SS++DG C  G +D A+ 
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L + +      PD + +T ++ GL      +    L  EM+ +   P   T +++I  L 
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLC 418

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           + G +  A+    + ++      C+P+ V Y +II  LC +  I  A +L S+++S   +
Sbjct: 419 QKGLVDRAIKVVEQMSENG----CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCK 474

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD  T+ T+L+GL    R  D   L+ +M+     PDA     ++    + G L  A   
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534

Query: 566 SEFLKES 572
            + + E+
Sbjct: 535 LKIMAEN 541



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 233/497 (46%), Gaps = 9/497 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI A    G ++EAL +   +      P       +L  L    ++  V E + EM
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  D VT+  ++   C QG V +A+ + D M + G  P +V Y+ ++ GLC+  ++
Sbjct: 294 ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRV 353

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   ++  G  P+   Y  ++ G C +     A E   EM+  +  P+ VTF  +
Sbjct: 354 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV 413

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC+ G +  A      M++ G  P+I  YN +IDG C    + +AM L S ++ +  
Sbjct: 414 IASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ T+N L+KGLC V + E AE L+  M       +  T+N++I   C++G + +A+ 
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
               M E G  PN  T++ ++D   KAG    A+ L + M   +  PD++ +  +I  ++
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNIT 591

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G M+E L L + M+   ++P   T  SL +G+ +      A+       D       S
Sbjct: 592 KAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG----LS 647

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  I+   C + +   A   F+ M S    PD  TY  +L  L     + +   L
Sbjct: 648 PDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQL 707

Query: 531 LADMIKMGIVPDAVINQ 547
           L ++  +G++  ++I +
Sbjct: 708 LVNLCSLGVLDKSLIEE 724



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 97/209 (46%), Gaps = 5/209 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+T+I +  + G + +A+   + +     +P     N +++ L+K GK     +  
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M       D++TY  +I      G + +AL+L   M+  G+ P  + Y  L +G+C E
Sbjct: 571 SGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRE 628

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +    A  M   +++ G+ P+   YN ++ G+C+    + A++ +  M+     P+  T+
Sbjct: 629 DGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            +L++ L     L  A    V++   GV 
Sbjct: 689 IILLEALAYECLLDEAKQLLVNLCSLGVL 717


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 253/515 (49%), Gaps = 36/515 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+ A    G +EEA+ V    R     P     N L+    + G+ D      
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210

Query: 108 EEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             M   G    ++VT+  +++  C  G +  A  +FDEM+ +G+ P VV Y  L+ G C 
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + E+ ++F  M + G+VP++ T+ +L+   CK  ++ +A+    +M    L+ N VT
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DG CK G L  A      M K G+ P++  YN LI+G+CK G +  A  L  EME
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PDV TY+ +I G C VG L+ A  L QKM K+G+L + +TY+SLI G C+E  + 
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   M + GV+P+  T+++LIDG CK GN++ A+ L+ EM+ K ++PDVV ++ LI
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI----HGLFKNGRISNALNFFLEKTD 462
           +GLSK    KE  RL  ++      P      +L+       FK+               
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS--------------- 555

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                          A+++  C  G + +A K++  M   N + D   Y+ ++ G  R  
Sbjct: 556 -------------VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +   +     M++ G  P++     +VRG  E G
Sbjct: 603 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/408 (34%), Positives = 218/408 (53%), Gaps = 5/408 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A      M+  G+ P V  Y IL+  LC   ++ EA  +   MR  G  PN  TYN L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 198 GYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            +C+  +++ A      M    N +PN+VTF  +++GLCK G +  A   F  M + G+ 
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  YN L+ G+CK G L E++++ SEM +  + PDV T+  LI   C  G LE A  L
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + +M + G+  N VT+ +LIDG+CK+G ++ AL    +M + G++P+VV +++LI+G CK
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A  L  EM  K + PDVV ++ +I G  K GN+    +L ++ML+  + P   T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SSLI GL +  R+++A   F             P+   Y  +I   C +G + KA  L 
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLG----VQPDEFTYTTLIDGHCKEGNVEKALSLH 491

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +M    + PD  TY+ ++ GL ++ R  +   LL  +     VPD +
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 222/417 (53%), Gaps = 6/417 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P+V  Y  ++  L ++  +  A     SM   GV PN+YTYN L+   C    +  A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-VFPNIFVYNCLID 267
           +    +M      PN VT+  L+   C+ GEL  A      M + G   PN+  +N +++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG +  A  +  EM +  ++PDV +YN L+ G C VG L  +  +  +M + G++ 
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVT+ SLI   CK G++E+A+++ +QM E+G+  N VTF++LIDG CK G +D A+   
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    + P VV + ALI+G  K G M     L +EM   ++ P V T S++I G  K 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G + +A     +   K       P+ + Y+++I+ LC + ++  A +LF +M    ++PD
Sbjct: 412 GNLDSAFQLNQKMLKKG----VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             TYTT++ G  +   +   + L  +MI+ G++PD V   V++ G  ++   K A R
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 205/432 (47%), Gaps = 53/432 (12%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  + ++G + E+L V+ ++    ++P +    +L++   K G  +       +M 
Sbjct: 261 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + VT+  LID  C +G +  AL   +EM   GI+P+VV Y  LI+G C   +M 
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R M    V P++ TY+ ++ GYCKV +++ A +   +ML   + P+ +T+  L+
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+   L  A   F +M + GV P+ F Y  LIDGHCK GN+ +A+SL  EM +  + 
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------------- 335
           PDV TY++LI GL    + + A  LL K+Y E  + + + Y++L                
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560

Query: 336 ----------------------------------IDGYCKEGDMEKALSVCSQMTEKGVE 361
                                             I G+C+ G++ KALS   QM   G  
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN  +  SL+ G  + G +  A     +++    + D     ALID   K+GN+   + +
Sbjct: 621 PNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDV 680

Query: 422 YKEMLEAKITPS 433
              M    + PS
Sbjct: 681 LCGMARDGLLPS 692



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 186/371 (50%), Gaps = 35/371 (9%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  YN ++     A +L  A    S M +  ++P+V+TYNIL++ LC  G+LE A
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLID 372
            G++  M   G   N VTYN+L+  +C+ G+++ A  V S M E+G  +PN+VTF+S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKAG ++ A  ++ EMV + L PDVV +  L+ G  K G + E+L ++ EM +  + P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDK-----------TDGGYC------------ 469
            V T +SLIH   K G +  A+    +  ++              G+C            
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 470 --------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                    P+ V Y A+I   C  G++  A +L  +M +  ++PD  TY+T++ G  + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
             +     L   M+K G++PDA+    ++RG  E   L  A  C  F    ++G    E 
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA--CELFENMLQLGVQPDEF 469

Query: 582 HTTRSFLGHLK 592
             T    GH K
Sbjct: 470 TYTTLIDGHCK 480


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 263/512 (51%), Gaps = 12/512 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN L  +  P   PS+  F+ L+ + ++M H    L +  +++   V P +   N L+
Sbjct: 51  SSFNRLLHMHPP---PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G   D  T+  LI   C +G + +AL+LFD+MID+G +
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  LI+GLC       A  + RSM +    P++  Y +++D  CK   V  A   
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + +M+   + P++ T+  L+  LC + E +        M    + P++ +++ ++D  CK
Sbjct: 228 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 287

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA  +   M +  + PDV TY  L+ G C   +++ A  +   M ++G   +V++
Sbjct: 288 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y +LI+GYCK   ++KA+ +  +M  K   P+  T+++L+ G C  G +  A+ L+ EMV
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD+V ++ L+D L K+ +++E + L K +  + + P +   + +I G+ + G + 
Sbjct: 408 ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 467

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       P+   Y  +I  LC  G + +A+KLF +M  ++  PD CTY
Sbjct: 468 AARDLFSNLSSKG----LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 523

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
            T+ RG L+    L  + LL +M+  G   D+
Sbjct: 524 NTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 243/486 (50%), Gaps = 4/486 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     LL  + K   + +V     +M   G+  +V T  +LI+  C    V  A ++
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P    +T LI GLC E K+ EA  +F  M + G  PN+ TY  L++G CK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V + + A+     M   N QP+VV +  ++D LCK  ++  A N F  M   G+ P+IF 
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+   C         +L ++M   +I PDV  ++ ++  LC  G++  A  ++  M 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G+  +VVTY +L+DG+C + +M++A+ V   M  KG  P+V+++++LI+G CK   ID
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM  K  +PD   +  L+ GL   G +++ + L+ EM+     P + T S L+
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A+          +    +P+  +Y  II  +C  G++  A  LFS++ S
Sbjct: 423 DSLCKNRHLEEAMALL----KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L P   TY  M+ GL +   + +   L  +M      PD      + RG+ +N +   
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538

Query: 562 AFRCSE 567
           A +  E
Sbjct: 539 AIQLLE 544



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 253/485 (52%), Gaps = 12/485 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +    S+   ++S  +P   P+V++   LI +F  +  +  A  V  KI  L   P  
Sbjct: 79  KHYSTVLSLSTQMDSFGVP---PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDP 135

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L   
Sbjct: 136 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 195

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M     +P VVIYT +I  LC + ++ EA ++F  M   G+ P+++TY +L+   C + +
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   ++M++  + P+VV F  ++D LCK G++  A      M + GV P++  Y  
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M +   +PDV +Y  LI G C + +++ A  L ++M ++ 
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + +  TYN+L+ G C  G ++ A+++  +M  +G  P++VT+S L+D  CK  +++ AM
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAM 435

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L   +   +L PD+ V+  +IDG+ + G ++    L+  +    + PSV+T + +IHGL
Sbjct: 436 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G ++ A   F+E     DG  CSP+   Y  I +    + + L+A +L  +M +   
Sbjct: 496 CKRGLLNEANKLFME----MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551

Query: 505 RPDNC 509
             D+C
Sbjct: 552 SADSC 556



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ ++     P++V +  L+  +          S+   M   GV PN+YT N L++
Sbjct: 49  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 108

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V  A     ++L    QP+  TF  L+ GLC  G++  A + F  M   G  P
Sbjct: 109 SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 168

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+G CK GN   A+ L   ME+    PDV  Y  +I  LC   Q+  A  L 
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TY SL+   C   + +   ++ +QM    + P+VV FS+++D  CK 
Sbjct: 229 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 288

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M+ + + PDVV +T L+DG      M E ++++  M+     P V + 
Sbjct: 289 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 348

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI+G  K  +I  A+  F E   K       P+   Y  ++  LC+ G++  A  LF 
Sbjct: 349 TTLINGYCKIHKIDKAMYLFEEMCRKE----WIPDTKTYNTLMYGLCHVGRLQDAIALFH 404

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  TY+ +L  L + + + + M LL  +    + PD  +  +++ G    G
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464

Query: 558 DLKSA 562
           +L++A
Sbjct: 465 ELEAA 469



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 189/395 (47%), Gaps = 4/395 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  +      P++  +  L+    K+   +  L    +M    + PNV T 
Sbjct: 44  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++  C +  +  A +    + K G  P+   +  LI G C  G + EA+ L  +M  
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+V TY  LI GLC VG    A  LL+ M +     +VV Y S+ID  CK+  + +
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 223

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ SQM  +G+ P++ T++SL+   C          L  +MV   ++PDVV+F+ ++D
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 283

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G + E   +   M++  + P V T ++L+ G      +  A+  F     K   G
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK---G 340

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + +P+ + Y  +I   C   +I KA  LF +M      PD  TY T++ GL    R+ D 
Sbjct: 341 F-APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + L  +M+  G +PD V   +++    +N  L+ A
Sbjct: 400 IALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 269/539 (49%), Gaps = 54/539 (10%)

Query: 39  FNALNSLEIPKFNPS-----VFSTLIIAFSEMGHIEEA---------LWVYRKIEVLPAI 84
           F+A   + I  F P+     +F + I  FS++ H ++            +  K    P  
Sbjct: 3   FSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTF 62

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           Q  N +L+ L+K     +    +++M L G+ +D  T+ +LI+C    G    + ++F +
Sbjct: 63  QF-NKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAK 121

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           ++ KG  PT +                                   T+N L+ G C    
Sbjct: 122 ILKKGYHPTAI-----------------------------------TFNTLIKGLCLKGH 146

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +++AL F+ +++      + V++G L++GLCKVG + AA      +    V PN  +YN 
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +ID  CKA  + +A  L S+M    I PDVFTYN LI G   V +L  A  L  KM KE 
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I  NV T+N L+DG+CKEG +  A  V + M +  ++P+VVT++SL+DG C    ++ A 
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAK 326

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++  M    ++ +V ++T +++G  K   + E + L++EM   KI P+V T SSLI GL
Sbjct: 327 DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGL 386

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K GRI  AL    E  D+       PN V Y++I+ ALC +  + KA  L ++++   +
Sbjct: 387 CKLGRIFYALKLVDEMHDRGQ----PPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           RPD  TYT +++GL ++ R+ D   +  D++  G   D     VM++G+ + G    A 
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 237/461 (51%), Gaps = 10/461 (2%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKG 98
           LN +E   F    F+ LI  FS++G    +  ++ KI      P     N L+ GL  KG
Sbjct: 89  LNGIESDFF---TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKG 145

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
                  F++++V  G   D V+YG LI+  C  G +  AL L   +  K ++P  V+Y 
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ++I  +C    + +A  ++  M    + P+++TYNAL+ G+  V+ +N A++ +++M   
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE 265

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ PNV TF +L+DG CK G++  A      M K  + P++  YN L+DG+C    + +A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   M    +  +V  Y  ++ G C +  ++ A  L ++M    I+ NVVTY+SLIDG
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G +  AL +  +M ++G  PN+VT+SS++D  CK  ++D A+ L T +  + + PD
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +T LI GL + G +++   +++++L       V+  + +I G    G    AL    
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALL- 504

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
               K +   C PN   Y  +I +L    +   A KL  +M
Sbjct: 505 ---SKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 190/375 (50%), Gaps = 3/375 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    ++G I  AL + ++++   V P     N +++ + K    +  ++ Y +MV
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DV TY  LI        +  A++LF++M  + I P V  + IL+ G C E K+ 
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A+ +   M +  + P++ TYN+LMDGYC +  VN+A + +  M    +  NV  +  ++
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G CK+  +  A N F  M    + PN+  Y+ LIDG CK G +F A+ L  EM      
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ TY+ ++  LC    ++ A  LL  +  +GI  ++ TY  LI G C+ G +E A +V
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +  KG   +V  ++ +I G C  G  D A+ L ++M     +P+   +  +I  L +
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528

Query: 412 DGNMKETLRLYKEML 426
                   +L +EM+
Sbjct: 529 KDENDTAEKLLREMI 543



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 191/349 (54%), Gaps = 3/349 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I    +   + +A  +Y ++    + P +   NAL++G     K +   + +
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M    +  +V T+ +L+D  C +G V  A  +   M+   I+P VV Y  L+ G C+ 
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           NK+ +A+ +F SM   GV+ N+  Y  +++G+CK+  V+ A+  + EM    + PNVVT+
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLCK+G +  A      M   G  PNI  Y+ ++D  CK  ++ +A++L + ++ 
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKD 439

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PD++TY ILIKGLC  G+LE A+ + + +  +G   +V  Y  +I G+C +G  +K
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           AL++ S+M + G  PN  T+  +I    +    D A  L  EM+++ L+
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 183/396 (46%), Gaps = 31/396 (7%)

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            F H +LH N  P    F  ++  L K      A +    M   G+  + F +N LI+  
Sbjct: 47  SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            + G    + S+ +++ K    P   T+N LIKGLC  G +  A     K+  +G   + 
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V+Y +LI+G CK G +  AL +  ++  K V+PN V ++ +ID  CKA  ++ A  LY++
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           MV K + PDV  + ALI G S    +   + L+ +M +  I P+V+T + L+ G  K G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 450 ISNA---LNFFLEKTDKTD--------GGYCSPNHV--------------------LYAA 478
           +++A   L   ++   K D         GYCS N V                    +Y  
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++   C    + +A  LF +MR   + P+  TY++++ GL +  R+   + L+ +M   G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             P+ V    ++    +N  +  A      LK+  I
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 169/513 (32%), Positives = 250/513 (48%), Gaps = 61/513 (11%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    K +  +  ++EM + G+  DV TY +LID  C  G + +A  
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF+EM   G  PTVV YT LIH      ++ +A  +F  M + G  PN  TY AL+DG C
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 201 KVADVNRALEFYHEML----------------HHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++++A E Y +++                 H L PNVVT+G L+DGLCK  ++  A 
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  PN  VY+ LIDG CKAG +  A  +  +M K    P V TY  LI  +
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G+L+ A  +L +M K+    NVVTY ++IDG C+ G+ EKAL + S M EKG  PNV
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD----------GN 414
           VT+++LIDG  KAG ID ++ L+T+M  K   P+ V +  LI+ L             G 
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644

Query: 415 MKET-----------------------LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           MK+T                       L + +EM      P       LI    K GR+ 
Sbjct: 645 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704

Query: 452 NALNFFLEKTD-----KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            A+    E  +     KTD         +YA++IQALC   Q+ +A +L+S+M      P
Sbjct: 705 IAMELHKEMMEVPSSVKTDND-------MYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +   +  +++GL+  K+  + + L   +   G+
Sbjct: 758 ELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 245/550 (44%), Gaps = 31/550 (5%)

Query: 40  NALNSLEIPKFN-PSVFST-LIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL 94
           +AL+ +E   F   +V  T +I    E  + +EA+    ++     +P +     LL+G 
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           +KK +          M+  G   +   +  L+   C + D   A  L + M   G  P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           V+Y I I  +C + K+        AE ++  M     V N           C V   ++A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM+     P+  T+  ++  LC   ++  A   F  M   GV P+++ Y  LID 
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A  L  EM     SP V TY  LI       Q+  A  +  +M   G   N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMT----------------EKGVEPNVVTFSSLID 372
            VTY +L+DG CK G++ KA  V +++                    + PNVVT+ +L+D
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKA  +D A  L   M+     P+ +V+ ALIDG  K G +     ++ +M +    P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T +SLI  +FK+GR+  A+    +    +    C+PN V Y A+I  LC  G+  KA
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS----CTPNVVTYTAMIDGLCRIGESEKA 568

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            KL S M      P+  TYT ++ GL +A ++   + L   M + G  P+ V  +V++  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 553 YQENGDLKSA 562
               G L  A
Sbjct: 629 LCAAGLLDKA 638



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 235/527 (44%), Gaps = 29/527 (5%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C  +++GL++   FD    F   M     + +VVTY  L+     +  +     + + M+
Sbjct: 110 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 169

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV- 205
            +G  P   ++  L+H  CNE     A  +   M  CG  P    YN  +   C    + 
Sbjct: 170 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP 229

Query: 206 -----NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A + Y EML  N   N V        LC VG+   A      M + G  P+  
Sbjct: 230 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 289

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +I   C A  + +A  L  EM+   ++PDV+TY ILI   C  G +E A+ L ++M
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G    VVTY +LI  Y K   + +A  +  +M + G  PN VT+ +L+DG CKAGNI
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 381 DAAMGLYTEMVIKS----------------LVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             A  +Y +++  S                L P+VV + AL+DGL K   +     L   
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML +   P+     +LI G  K G+I +A   FL+    T  GY    H  Y ++I  + 
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ---MTKCGYLPSVHT-YTSLIDRMF 525

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            DG++  A K+ S M  D+  P+  TYT M+ GL R       + LL+ M + G  P+ V
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
               ++ G  + G +  +     F + SR G S     T R  + HL
Sbjct: 586 TYTALIDGLGKAGKIDLSL--DLFTQMSRKGCSPNY-VTYRVLINHL 629



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 222/547 (40%), Gaps = 64/547 (11%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+    NAL+  L   G+ D  +   +EM   G   D  T G      C +G    AL++
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +    +  +   V+ T +I GL   +   EA S    MR    +PN+ TY  L+ G+ K
Sbjct: 98  IER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +       + M+     PN   F  L+   C   +   A      M   G  P   V
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 262 YNCLIDG-----------------------------------------HCKAGNLFEAMS 280
           YN  I                                            C  G   +A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  EM +    PD  TY+ +I  LC   ++E A  L Q+M   G+  +V TY  LID +C
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K G +E+A  +  +M   G  P VVT+++LI    KA  +  A  ++  MV     P+ V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 401 VFTALIDGLSKDGNMKETLRLYKEML----------------EAKITPSVFTVSSLIHGL 444
            + AL+DGL K GN+ +   +Y +++                   + P+V T  +L+ GL
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  ++ +A     E  D      C PNH++Y A+I   C  G+I  A ++F  M     
Sbjct: 455 CKAHKVDHA----HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P   TYT+++  + +  R+   M +L+ M+K    P+ V    M+ G    G+ + A +
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 570

Query: 565 CSEFLKE 571
               ++E
Sbjct: 571 LLSLMEE 577



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 166/406 (40%), Gaps = 17/406 (4%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +++ G  P+  TYNAL+        V+       EM       +  T G     LCK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A +  +    F +  +  +   +I G  +A    EAMS    M      P+V TY  
Sbjct: 91  WADALD-MIEREDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ G     QL   + ++  M  EG   N   +NSL+  YC E D   A  + ++MT  G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 360 VEPNVVTFSSLIDGQCKAGN------IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
             P  V ++  I   C          +D A  +Y EM+  + V + V        L   G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
              +  +L KEM+     P   T S +I  L    ++  A   F E   K  G   +P+ 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM--KMVG--VTPDV 323

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I + C  G I +A  LF +MRS    P   TYT ++   L+AK++     +   
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           M+  G  P+ V    +V G  + G++  AF     L    IG+S++
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDS 425



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 140/315 (44%), Gaps = 7/315 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+  LI  F + G I+ A  V+    K   LP++    +L++ + K G+ D   +  
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+      +VVTY  +ID  C  G+  KAL L   M +KG  P VV YT LI GL   
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  +  +F  M   G  PN  TY  L++  C    +++A     EM        +  +
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              + G  K     A+      M  +G  P   VY  LID   KAG L  AM L  EM +
Sbjct: 658 RCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 288 F--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               +  D   Y  LI+ LC   Q+E A  L  +M + G +  +  +  LI G  +    
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 346 EKALSVCSQMTEKGV 360
           ++AL +C  +  +GV
Sbjct: 776 DEALQLCYGICHEGV 790


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 244/470 (51%), Gaps = 7/470 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  LI +  +M   +EA    +  ++  VLP I+ CN+LL+  +K  + ++ W  Y EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + V T+ ++I+  C +G + KA +    M   G++P +V Y  ++HG C+  ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+++  +M+   + P+ +TY +L+ G CK   +  A + + EM+   L+P+ V +  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G L  A  +   M K G+ P +  YN LI          EA  +  E+++  I
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPD  TYNILI G C     + A  L  +M   GI     TY SL+    K+  M++A  
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++T +GV P+ + F++LIDG C   N+  A  L  +M    + PD V F  ++ G  
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++E   L+ EM    I P   + ++LI G  + G I +A   F  + +  D G+ +
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA---FRVRNEMLDTGF-N 568

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           P  + Y A++Q LC + +   A +L  +M S  + PD+ TY T++ G+ +
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 230/410 (56%), Gaps = 4/410 (0%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++  LI   C+ N+  EA   F +M+E GV+P + T N+L+  + K+     A   Y E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++ +V TF ++++ LCK G+L+ A +F  HM   GV PNI  YN ++ G+C +G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A ++ + M++ +I PD FTY  LI G+C  G+LE A  + ++M ++G+  + V YN+
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+C +G+++ A +   +M +KG+ P + T++SLI         D A  +  E+  K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PD + +  LI+G  +  N K+   L+ EML + I P+  T +SL+H L K  R+  A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F + T  ++G    P+ +++ A+I   C +  +  A +L  DM    + PD  T+ T+
Sbjct: 452 DLFKKIT--SEG--VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           ++G  R  ++ +   L  +M + GI PD +    ++ GY   GD+K AFR
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 206/366 (56%), Gaps = 3/366 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++T++  +   G +E A   L   ++ ++ P      +L++G+ K+G+ +   +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEMV  GL    V Y  LID  C +G++  A    DEM+ KGI PT+  Y  LIH L 
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E +  EAE M + ++E G+ P+  TYN L++GYC+ A+  +A   + EML   ++P   
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+  L K   ++ A + F  +   GV P+  ++N LIDGHC   N+  A  L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++ ++ PD  T+N +++G C  G++E A  L  +M + GI  + +++N+LI GY + GD+
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  V ++M + G  P V+T+++L+ G CK    D A  L  EMV K + PD   +  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 406 IDGLSK 411
           I+G++K
Sbjct: 613 IEGIAK 618



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 174/347 (50%), Gaps = 7/347 (2%)

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           + F  L+   C +     A   F  M + GV P I   N L+    K      A  L +E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  I   V+T+NI+I  LC  G+L+ A+  +  M   G+  N+VTYN+++ GYC  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A ++ + M  + +EP+  T+ SLI G CK G ++ A  ++ EMV K L P  V++  
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG    GN+        EML+  I+P++ T +SLIH LF   R   A     E  +K 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SP+ + Y  +I   C      KA  L  +M +  ++P   TYT++L  L +  RM
Sbjct: 392 ----ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +   L   +   G++PDA++   ++ G+  N ++K AF   E LK+
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF---ELLKD 491



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 40/293 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +++TLI  F   G+++ A   Y+    K  + P +   N+L++ L  + + D      +E
Sbjct: 328 IYNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           +   G+  D +TY +LI+  C   +  KA  L DEM+  GI+PT   YT L+H L  +N+
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446

Query: 170 MVEAESMFRSMRECGVVPNLYTYNAL---------------------------------- 195
           M EA+ +F+ +   GV+P+   +NAL                                  
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506

Query: 196 -MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            M G+C+   V  A E + EM    ++P+ ++F  L+ G  + G+++ A      M   G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             P +  YN L+ G CK      A  L  EM    ++PD  TY  LI+G+  V
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
            + +   ++ +++P  +   F+T++      G +EEA  ++ +++   + P   + N L+
Sbjct: 485 AFELLKDMDRMKVPP-DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G  ++G     +    EM+  G    V+TY  L+   C   +   A  L  EM+ KG+ 
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 152 PTVVIYTILIHGLCNEN 168
           P    Y  LI G+   N
Sbjct: 604 PDDTTYFTLIEGIAKVN 620


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 264/550 (48%), Gaps = 36/550 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N SVF  LI  F +   + EA   +   R      +I ACNAL+  L++ G  +  W  Y
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +E+   G+  +V T  ++++  C  G + K      E+ +KG+ P +V Y  LI    ++
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M EA  +  +M   G  P +YTYN +++G CK     RA E + EML   L P+  T+
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+   CK G+     N F  M    V P++  ++ ++    ++GNL +A+   + +++
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD   Y ILI+G C  G +  A  L  +M ++G   +VVTYN+++ G CK   + +
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + ++MTE+G+ P+  T + LIDG CK GN+  AM L+ +M  K +  DVV +  L+D
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT--- 464
           G  K G++     ++ +M+  +I P+  + S L++ L   G +S A   + E   K+   
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573

Query: 465 --------DGGYCS--------------------PNHVLYAAIIQALCYDGQILKASKLF 496
                     GYC                     P+ + Y  +I     +  + KA  L 
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633

Query: 497 SDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
             M  +   L PD  TY ++L G  R  +M +   +L  MI+ G+ PD      ++ G+ 
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693

Query: 555 ENGDLKSAFR 564
              +L  AFR
Sbjct: 694 SQDNLTEAFR 703



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 221/446 (49%), Gaps = 40/446 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+S  G +EEA  +   +      P +   N ++NGL K GK++   E + EM
Sbjct: 262 TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 321

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  D  TY  L+   C +GD ++  N+F +M  + + P +V ++ ++        +
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   F S++E G++P+   Y  L+ GYC+   ++ A+   +EML      +VVT+  +
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK   L  A   F  M + G+FP+ +    LIDGHCK GNL  AM L  +M++  I
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             DV TYN L+ G   VG ++ A+ +   M  + IL   ++++ L++  C +G + +A  
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGN------------------------------- 379
           V  +M  K ++P V+  +S+I G C++GN                               
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621

Query: 380 ----IDAAMGLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
               +  A GL  +M  K   LVPDV  + +++ G  ++  MKE   + ++M+E  + P 
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPD 681

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLE 459
             T +SLI+G      ++ A  F  E
Sbjct: 682 RSTYTSLINGFVSQDNLTEAFRFHDE 707



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 196/359 (54%), Gaps = 2/359 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R  +V+P +   +++++   + G  D    ++  +   GL+ D V Y +LI   C +G +
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A+NL +EM+ +G    VV Y  ++HGLC    + EA+ +F  M E G+ P+ YT   L
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTIL 476

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG+CK+ ++  A+E + +M    ++ +VVT+  L+DG  KVG++  A   +  M    +
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P    ++ L++  C  G+L EA  +  EM    I P V   N +IKG C  G     E 
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK--GVEPNVVTFSSLIDG 373
            L+KM  EG + + ++YN+LI G+ KE +M KA  +  +M EK  G+ P+V T++S++ G
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
            C+   +  A  +  +M+ + + PD   +T+LI+G     N+ E  R + EML+   +P
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 187/349 (53%), Gaps = 5/349 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS+++  F+  G++++AL  +  ++   ++P       L+ G  +KG          EM+
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DVVTY  ++   C +  + +A  LF+EM ++G+ P     TILI G C    + 
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +F+ M+E  +  ++ TYN L+DG+ KV D++ A E + +M+   + P  ++F +L+
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           + LC  G L  A   +  M    + P + + N +I G+C++GN  +      +M      
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFV 607

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--GILANVVTYNSLIDGYCKEGDMEKAL 349
           PD  +YN LI G      +  A GL++KM ++  G++ +V TYNS++ G+C+E  M++A 
Sbjct: 608 PDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAE 667

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +V  +M E+GV P+  T++SLI+G     N+  A   + EM+ +   PD
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 24/423 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           T +  + +IH L    ++ +A+S + R +R  GV               +V  VN  +  
Sbjct: 102 TSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGV--------------SRVEIVNSLVST 147

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y      N   N   F +L+    +  +LR A   F  +   G   +I   N LI    +
Sbjct: 148 YS-----NCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVR 202

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  +  E+ +  +  +V+T NI++  LC  G++E     L ++ ++G+  ++VT
Sbjct: 203 IGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVT 262

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI  Y  +G ME+A  +   M  KG  P V T++++I+G CK G  + A  ++ EM+
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L PD   + +L+    K G+  ET  ++ +M    + P +   SS++    ++G + 
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL +F    +        P++V+Y  +IQ  C  G I +A  L ++M       D  TY
Sbjct: 383 KALMYF----NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTY 438

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            T+L GL + K + +   L  +M + G+ PD+    +++ G+ + G+L++A    + +KE
Sbjct: 439 NTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498

Query: 572 SRI 574
            RI
Sbjct: 499 KRI 501



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P  FS L+ A    GH+ EA  V+ ++    + P +  CN+++ G  + G       F E
Sbjct: 540 PISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLE 599

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYTILIHGLCN 166
           +M+  G V D ++Y  LI     + ++ KA  L  +M +K  G+ P V  Y  ++HG C 
Sbjct: 600 KMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCR 659

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           EN+M EAE++ R M E GV P+  TY +L++G+    ++  A  F+ EML     P+
Sbjct: 660 ENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 245/468 (52%), Gaps = 10/468 (2%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           L+  ++++  + +I+      L SRK      SVF A+      + +  VF  L+IA+ +
Sbjct: 111 LSAHQMFQECQSIIR-----FLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWD 165

Query: 65  MGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
            G + +A+  +R +      +P    C  LL+ +I      ++W FY E++  G    V 
Sbjct: 166 SGFVSDAIQCFRLVRNSNFQIP-FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQ 224

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
            Y +LI+  C +G +  A  +F+E+  +G+ PT V +  LI+GLC    + E   + ++M
Sbjct: 225 YYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTM 284

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E  + P+++TY+ L+ G CK   ++ A + + EM    L+PN +TF  L+DG  +   +
Sbjct: 285 EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRM 344

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A N +  M   GV P++ +YN L++G CK G++ +A  L  EM+   + PD  TY  L
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTL 404

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G C  G LE A  + + M +EG++ + V + +LI G+C++G +  A     +M E G+
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +P+  T++ +IDG CK GN+     L  EM I    P V+ +  L++GL K G MK    
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L + ML   +TP   T + L+ G  KNG+  + L    EK    D  Y
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAY 572



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 190/347 (54%), Gaps = 4/347 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY E+L +   P V  + +L++  CK G +R A   F  + K G+ P    +N LI+G C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K+ NL E   L   ME+  I PDVFTY++LI GLC  G+L+ AE L  +M + G+  N +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LIDG  +   M+ A++   QM   GV+P++V +++L++G CK G+++ A  L  EM
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +  + PD + +T LIDG  K+G+++  + + K M E  +       ++LI G  ++GR+
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A     E  +        P+   Y  +I   C  G +    KL  +M+ +  +P   T
Sbjct: 450 RDAERTLREMVEAG----MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y  ++ GL +  +M +  MLL  M+ +G+ PD +   +++ G+ +NG
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 222/447 (49%), Gaps = 5/447 (1%)

Query: 85  QACNALLNGLI-KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           Q C +++  L+ +KGK  +   F   +   G       +  L+      G V  A+  F 
Sbjct: 118 QECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFR 177

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            + +   +        L+  + N N  V   + +  + E G  P +  YN L++ +CK  
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEG 237

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            +  A   ++E+    L+P  V+F  L++GLCK   L         M +  ++P++F Y+
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI G CK G L  A  L  EM++  + P+  T+  LI G     +++ A     +M   
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTM 357

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  ++V YN+L++G CK GD+ KA  +  +M   G++P+ +T+++LIDG CK G++++A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M +   M  + +V D V FTALI G  +DG +++  R  +EM+EA + P   T + +I G
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K G +   + F L K  + +G    P  + Y  ++  LC  GQ+  A+ L   M +  
Sbjct: 478 YCKKGNVK--MGFKLLKEMQINGH--KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMML 530
           + PD+ TY  +L G  +  +  D++ L
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 156/310 (50%), Gaps = 7/310 (2%)

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+D    + +     +  SE+ ++   P V  YNILI   C  G +  A+ +  ++ K G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +    V++N+LI+G CK  ++++   +   M E  + P+V T+S LI G CK G +D A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM  + L P+ + FTALIDG  +   M   +  Y +ML   + P +   ++L++GL
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G ++ A        D+       P+ + Y  +I   C +G +  A ++   M  + +
Sbjct: 374 CKVGDVNKARKL----VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             DN  +T ++ G  R  R+ D    L +M++ G+ PD     +++ GY + G++K  F+
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 565 CSEFLKESRI 574
               LKE +I
Sbjct: 490 ---LLKEMQI 496


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 262/492 (53%), Gaps = 8/492 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++   +   + + +  +F+ V +F +++ L G+  ++ T  ++I+C C       A +
Sbjct: 85  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +++  G EP    +  LI GL  E K+ EA  +   M E G  P++ TYN++++G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  D + AL+   +M   N++ +V T+  ++D LC+ G + AA + F  M   G+  ++ 
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G CKAG   +   L  +M   EI P+V T+N+L+      G+L+ A  L ++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              GI  N++TYN+L+DGYC +  + +A ++   M      P++VTF+SLI G C    +
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D  M ++  +  + LV + V ++ L+ G  + G +K    L++EM+   + P V T   L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 441 IHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + GL  NG++  AL  F  L+K+ K D G      V+Y  II+ +C  G++  A  LF  
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKS-KMDLGI-----VMYTTIIEGMCKGGKVEDAWNLFCS 498

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    ++P+  TYT M+ GL +   + +  +LL  M + G  P+      ++R +  +GD
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558

Query: 559 LKSAFRCSEFLK 570
           L ++ +  E +K
Sbjct: 559 LTASAKLIEEMK 570



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 240/450 (53%), Gaps = 7/450 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+ GL  +GK        + MV  G   DVVTY  +++  C  GD   AL+L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M ++ ++  V  Y+ +I  LC +  +  A S+F+ M   G+  ++ TYN+L+ G CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N       +M+   + PNV+TF VL+D   K G+L+ A   +  M   G+ PNI  
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+C    L EA ++   M + + SPD+ T+  LIKG C V +++    + + + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G++AN VTY+ L+ G+C+ G ++ A  +  +M   GV P+V+T+  L+DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ ++ ++    +   +V++T +I+G+ K G +++   L+  +    + P+V T + +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K G +S A N  L K ++ DG   +PN   Y  +I+A   DG +  ++KL  +M+S
Sbjct: 516 SGLCKKGSLSEA-NILLRKMEE-DGN--APNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 502 DNLRPDNCTYTTMLRGLLRA---KRMLDVM 528
                D  +   ++  LL     K  LD++
Sbjct: 572 CGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 215/403 (53%), Gaps = 4/403 (0%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F+ M     +P+L  ++       +    N  L+F  ++  + +  N+ T  +++
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +   A +    + K G  P+   +N LI G    G + EA+ L   M +    
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV TYN ++ G+C  G    A  LL+KM +  + A+V TY+++ID  C++G ++ A+S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  KG++ +VVT++SL+ G CKAG  +    L  +MV + +VP+V+ F  L+D   K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G ++E   LYKEM+   I+P++ T ++L+ G     R+S A N      D      CSP
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSP 366

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V + ++I+  C   ++    K+F ++    L  +  TY+ +++G  ++ ++     L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +M+  G++PD +   +++ G  +NG L+ A    E L++S++
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF EMI     P++V ++     +    +        + +   G+  N+YT N +++
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+      A     +++    +P+  TF  L+ GL   G++  A      M + G  P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN +++G C++G+   A+ L  +ME+  +  DVFTY+ +I  LC  G ++ A  L 
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +GI ++VVTYNSL+ G CK G       +   M  + + PNV+TF+ L+D   K 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  LY EM+ + + P+++ +  L+DG      + E   +   M+  K +P + T 
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI G     R+ + +  F   + +        N V Y+ ++Q  C  G+I  A +LF 
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRG----LVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + PD  TY  +L GL    ++   + +  D+ K  +    V+   ++ G  + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 558 DLKSAF 563
            ++ A+
Sbjct: 488 KVEDAW 493



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM+    +P +V F+     +++       L   K++    I  +++T++ +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+   +  +   A +  L K  K   GY  P+   +  +I+ L  +G++ +A  L   M 
Sbjct: 130 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +  +PD  TY +++ G+ R+      + LL  M +  +  D      ++     +G + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 561 SAFRCSEFLKESRIGSS 577
           +A    + ++   I SS
Sbjct: 246 AAISLFKEMETKGIKSS 262


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 267/524 (50%), Gaps = 11/524 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  E+A   L   R+   +P++ + N +L+ L +KG+ D   + +EEM
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                + ++ TY ++ID  C  G +  AL + D M D G+ P V+   I++  LC   ++
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S+F  +      P+  TY +L++G  +   V+ A + Y +ML  N  PN V +  L
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K G        +  M + G  P++ + N  +D   KAG + +  +L  E++    
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y ILI GL   G    A  L   M ++G + +   YN++IDG+CK G + KA  
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG EP VVT+ S+IDG  K   +D A  L+ E   K +  +VV++++LIDG  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +E+++  +TP+V+T + L+  L K   IS AL  F    D      C+
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK----CT 756

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN++ Y+ +I  LC   +  KA   + +M+    +P+  TYTTM+ GL +A  +++   L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                + G V D+ I   ++ G         A+R     +E+R+
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR---LFEEARL 857



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 238/501 (47%), Gaps = 13/501 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+   C  ++   IK  K    + F + M           Y  LI       D    L L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +M + G    V ++T LI     E ++  A S+   M+   + P++  YN  +D + K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+ A +F+HEM  + L  + VT+  ++  LCK   L  A   F HM +    P  + 
Sbjct: 283 AGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +I G+  AG   +A SL     +    P V +YN ++  L   GQ++ A    ++M 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+ I  N+ TYN +ID  CK G +E AL V   M + G+ PNV+T + ++D  CKA  +D
Sbjct: 403 KDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  +  K+  PD V + +LI+GL + G + E  +LY++ML+A   P+    +SLI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
              FK GR  +    + E         CSP+ +L    +  +   G+I K   LF ++++
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLG----CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN 577

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  +YT ++ GL++A    +   L   M + G V D      ++ G+ ++G +  
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK 637

Query: 562 AFRCSEFLKESRIGSSETEGH 582
           A++  E +K        T+GH
Sbjct: 638 AYQLLEEMK--------TKGH 650



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 246/527 (46%), Gaps = 10/527 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
           L  + I  F PS  +   ++++F +   + EA   +   RK++  PA  A   L+  L  
Sbjct: 153 LEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST 212

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
               D +   +++M   G   +V  +  LI     +G V  AL+L DEM    +EP VV+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVL 272

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y + I       K+  A   F  M+  G+V +  TY +++   CK   +N A+E +  M 
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            +   P    +  ++ G    G+   A +      + G  P++  YNC++    + G + 
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+    EM+K  I P++ TYNI+I  LC  G+LE A  +   M   G+  NV+T N ++
Sbjct: 393 EALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D  CK   ++ A S+   +  K   P+ VT+ SLI+G  + G +D A  LY +M+  + +
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+ VV+T+LI    K G  ++  ++Y EML    +P +  +++ +  +FK G I      
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E  +    G+  P+   Y  +I  L   G   +A +LF  M+      D   Y T++ 
Sbjct: 572 FQEIKNL---GFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           G  ++ ++     LL +M   G  P  V    ++ G  +   L  A+
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 214/484 (44%), Gaps = 40/484 (8%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLI 95
           F  +    IP  N S ++ +I    + G +E AL V   ++   + P +   N +++ L 
Sbjct: 398 FEEMKKDAIP--NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC 455

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K  + D     +E +       D VTY  LI+     G V +A  L+++M+D    P  V
Sbjct: 456 KAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAV 515

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +YT LI       +  +   ++  M   G  P+L   N  MD   K  ++ +    + E+
Sbjct: 516 VYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI 575

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
            +    P+  ++ +L+ GL K G    A   F  M + G   +   YN +IDG CK+G +
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L  EM+     P V TY  +I GL  + +L+ A  L ++   +GI  NVV Y+SL
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNV------------------------------- 364
           IDG+ K G +++A  +  ++ +KG+ PNV                               
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 365 ----VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
               +T+S LI G CK    + A   + EM  +   P+V  +T +I GL+K GN+ E   
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+++  E          +++I GL    R S+A   F E   K    Y     VL  ++ 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 481 QALC 484
           +A C
Sbjct: 876 KAEC 879



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 157/321 (48%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G IE+   ++++I+ L   P  ++   L++GL+K G     +E +  M   G V D   Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +ID  C  G V KA  L +EM  KG EPTVV Y  +I GL   +++ EA  +F   + 
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  N+  Y++L+DG+ KV  ++ A     E++   L PNV T+  L+D L K  E+  
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M      PN   Y+ LI G CK     +A     EM+K    P+VFTY  +I 
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G +  A+ L +K  ++G +A+   YN++I+G         A  +  +   KG   
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
              T   L+D   KA  I+ A
Sbjct: 863 YTKTCVVLLDSLHKAECIEQA 883



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 152/306 (49%), Gaps = 3/306 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI    + G   EA  ++  ++    +   +A N +++G  K GK +  ++  EEM 
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G    VVTYG +ID       + +A  LF+E   KGIE  VVIY+ LI G     ++ 
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   + + G+ PN+YT+N L+D   K  +++ AL  +  M      PN +T+ +L+
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLCK+ +   A  F+  M K G  PN+F Y  +I G  KAGN+ EA +L  + ++    
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D   YN +I+GL    +   A  L ++   +G      T   L+D   K   +E+A  V
Sbjct: 827 ADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIV 886

Query: 352 CSQMTE 357
            + + E
Sbjct: 887 GAVLRE 892


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 265/530 (50%), Gaps = 22/530 (4%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSV--WEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           K   LP+I   N LL+ + K  KFD V       +M+  G    +VT   L++  C    
Sbjct: 35  KSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 94

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A+ L D+M++ G  P  + +T LIHGL   NK  EA ++   M + G  PNL TY  
Sbjct: 95  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 154

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +++G CK  D++ A    ++M    ++ +VV F  ++D LCK   +  A N F  M   G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN+  Y+ LI   C  G   +A  L S+M + +I+P++ T+N LI      G+   AE
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M K  I  ++ TYNSLI+G+C    ++KA  +   M  K   P++ T+++LI G 
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+  ++    L+ EM  + LV D V +T LI GL  DG+     +++K+M+   + P +
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T S L+ GL  NG++  AL  F    D         +  +Y  +I+ +C  G++     
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVF----DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  +    ++P+  TY TM+ GL   + + +   LL  M + G +PD+     ++R + 
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 555 ENGDLKSAFRCSEFLKESR----IGSSET---------EGHTTRSFLGHL 591
            +GD  ++   +E ++E R    +G + T         +G   +SFL  L
Sbjct: 511 RDGDKAAS---AELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 557



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 204/386 (52%), Gaps = 6/386 (1%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           FN LN +E  K    V  F+T+I +  +  H+++AL +++++E   + P +   ++L++ 
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L   G++    +   +M+   +  ++VT+  LID    +G  ++A  L D+MI + I+P 
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +  Y  LI+G C  +++ +A+ MF  M      P+L TYN L+ G+CK   V    E + 
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 348

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM H  L  + VT+  L+ GL   G+   A   F  M   GV P+I  Y+ L+DG C  G
Sbjct: 349 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 408

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L +A+ +   M+K EI  D++ Y  +I+G+C  G+++    L   +  +G+  NVVTYN
Sbjct: 409 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 468

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I G C +  +++A ++  +M E G  P+  T+++LI    + G+  A+  L  EM   
Sbjct: 469 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 528

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETL 419
             V D      L+  +  DG + ++ 
Sbjct: 529 RFVGDASTI-GLVANMLHDGRLDKSF 553



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF-FLEKTDKTDGGYC 469
           KD  + + + L+  M++++  PS+F  + L+  + K  +    ++   L K  K   GY 
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKL--GY- 75

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V  ++++   C+  +I  A  L   M     RPD  T+TT++ GL    +  + + 
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           L+  M++ G  P+ V   V+V G  + GD+  AF     ++ ++I
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 180


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 253/497 (50%), Gaps = 8/497 (1%)

Query: 66  GHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G + EA+ + R++       P   + N ++ G+ + G+     E ++EM    ++ + +T
Sbjct: 178 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 237

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +ID     GD+     L D+M+  G++P  + Y +L+ GLC   +M E  ++   M 
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              +VP+ +TY+ L DG  +  D    L  + + L + +     T  +L++GLCK G++ 
Sbjct: 298 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 357

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      +   G+ P   +YN LI+G+C+ G L  A S   +M+   I PD  TYN LI
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC   ++  A+ LL +M   G+   V T+N+LID Y + G +EK   V S+M E G++
Sbjct: 418 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVV++ S+++  CK G I  A+ +  +M  K ++P+  V+ A+ID   + G   +   L
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++M    I+PS+ T + LI GL    +IS A     E  +        P+ V Y  +I 
Sbjct: 538 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLIPDAVSYNTLIS 593

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A CY G I KA  L   M    ++    TY  ++ GL  A R+ ++  L   M++  +VP
Sbjct: 594 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 653

Query: 542 DAVINQVMVRGYQENGD 558
              I+ +MV  Y + G+
Sbjct: 654 SNAIHNIMVEAYSKYGN 670



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 249/510 (48%), Gaps = 5/510 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++ +CN LL  L+  G+   V   +  +   G   D   +   +  C   GD+ +A+ 
Sbjct: 126 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 185

Query: 141 LFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +   M  D    P    Y ++I G+    +  +A  +F  M E  V+PN  TYN ++DG+
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D+        +M+ H L+PN +T+ VL+ GLC+ G +         MA   + P+ 
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 305

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F Y+ L DG  + G+    +SL  +  K  ++   +T +IL+ GLC  G++  AE +LQ 
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +   G++   V YN+LI+GYC+ G++E A S   QM  + ++P+ +T+++LI+G CKA  
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I  A  L  EM    + P V  F  LID   + G +++   +  EM E  + P+V +  S
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +++   KNG+I  A+    +   K       PN  +Y AII A    G   +A  L   M
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKD----VLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +S+ + P   TY  +++GL    ++ +   ++  +    ++PDAV    ++      G++
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
             A    + + +  I S+    H   S LG
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLG 631



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 197/379 (51%), Gaps = 3/379 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    S  G  +  L +   Y K  V      C+ LLNGL K GK     E  + +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C  G++  A + F +M  + I+P  + Y  LI+GLC   ++
Sbjct: 367 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+ +   M++ GV P + T+N L+D Y +   + +      EM  + L+PNVV++G +
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++  CK G++  A      M    V PN  VYN +ID + + G   +A  L  +M+   I
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 546

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP + TYN+LIKGLC   Q+  AE ++  +    ++ + V+YN+LI   C  G+++KAL 
Sbjct: 547 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 606

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G++  V T+  LI G   AG ++    LY +M+  ++VP   +   +++  S
Sbjct: 607 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 666

Query: 411 KDGNMKETLRLYKEMLEAK 429
           K GN  +   L KEML+ +
Sbjct: 667 KYGNEIKAEDLRKEMLQKR 685



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 205/449 (45%), Gaps = 19/449 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNE--------NKMVEAESMFRSMRECGVVPNL 189
           AL L  ++ D+   P   + +      CN          +  +    F  +   G  P+ 
Sbjct: 111 ALRLLSDLADEARAPLPSLSS------CNLLLEALLSLGRHADVRRAFGILASAGARPDT 164

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGNFFV 248
           + +N  +       D+  A+     M      P N  ++ V++ G+ + G    A   F 
Sbjct: 165 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 224

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M +  V PN   YN +IDGH K G+L     L  +M    + P+  TYN+L+ GLC  G
Sbjct: 225 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 284

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++     LL +M  + ++ +  TY+ L DG  + GD +  LS+  +  + GV     T S
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 344

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L++G CK G +  A  +   +V   LVP  V++  LI+G  + G ++     + +M   
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I P   T ++LI+GL K  RI+NA +  +E  D       +P    +  +I A    GQ
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG----VNPTVETFNTLIDAYGRTGQ 460

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + K   + S+M+ + L+P+  +Y +++    +  ++ + + +L DM    ++P+A +   
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++  Y E+G    AF   E +K + I  S
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPS 549


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 240/461 (52%), Gaps = 8/461 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++ +F + G + +   ++ ++    + P     N L++G  KKG+ D     Y
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEMV  GL   + TY  L++  C +  + +A+ LF  M +KG EP VV Y+ +I GLC  
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 168 NKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            K+ EA E +F  M E G   N   YNAL++G CK  ++ RA +   EM      P+ +T
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++ GLC++G++  A  FF  M   G  P++  YN L+D   K G   EAM L  ++ 
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD  TYN ++ GL     ++ AE + +KM   G   N  TY+ ++ G+C+   ++
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  V  +M++ G  P+VVT++ L+DG CK   +D A  L++ MV     PD+V ++ ++
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL K   + +   L+  M+E K+ P V T + L+ GL K G++  A +      D+   
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL----DQMTC 422

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             C+P++V Y  ++  L   G+ ++A +L   M+      D
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 230/452 (50%), Gaps = 5/452 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T+ V++   C QG +     LF++M+D GI P  + Y ILI G   + ++ EA  ++  M
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G+ P++YTYN+L++ +CK   +  A+E +  M     +P+VVT+  ++ GLCK G++
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 241 RAAGNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
             A     H M + G   N   YN LI+G CK  N+  A  L  EM      PD  TYN 
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++ GLC +G++  A+     M   G   +VV YN L+D   KEG  ++A+ +   +  KG
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+ VT++S++ G  +  N+D A  ++ +MV     P+   ++ ++ G  +   + +  
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           ++ +EM +    P V T + L+ GL K   +  A   F   +   D G C+P+ V Y+ +
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF---STMVDNG-CAPDIVSYSVV 365

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC   ++  A  LF  M    L PD  T+  ++ GL +A ++ +   LL  M   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            PD V    ++ G ++ G    A R ++ +KE
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 231/465 (49%), Gaps = 5/465 (1%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           E  P       +L    K+GK    ++ +E+M+  G+  D + Y +LID    +G V +A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             L++EM+  G+EP++  Y  L++  C E KM EA  +F++M E G  P++ TY+ ++ G
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 199 YCKVADVNRALE-FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            CK   V  ALE  +H+M+      N V +  L++GLCK   +  A      MA  G  P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   YN ++ G C+ G + EA      M     SPDV  YN L+  L   G+ + A  L 
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + +  +G + + VTYNS++ G  ++ +M++A  +  +M   G  PN  T+S ++ G C+A
Sbjct: 243 KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  +  EM     VPDVV +  L+DGL K   + +   L+  M++    P + + 
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S +++GL K  ++ +A   F    D+       P+ V +  ++  LC  G++ +A  L  
Sbjct: 363 SVVLNGLCKTNKVHDARVLF----DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            M      PD   Y T++ GL +  R +    L   M + G + D
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 218/412 (52%), Gaps = 5/412 (1%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P    + +++   C + K+ +   +F  M + G+ P+   YN L+DGY K   V+ A   
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y EM+   L+P++ T+  L++  CK  +++ A   F  MA+ G  P++  Y+ +I G CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 272 AGNLFEAMS-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+  L  +M +   S +   YN LI GLC    +E A  LL++M  +G + + +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+++ G C+ G + +A      M  +G  P+VV ++ L+D   K G  D AM L+ ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + K  +PD V + +++ GL++  NM E   ++K+M+ +   P+  T S ++ G  +  ++
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A +  LE+  K       P+ V Y  ++  LC    + KA +LFS M  +   PD  +
Sbjct: 306 DDA-HKVLEEMSKIGA---VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y+ +L GL +  ++ D  +L   MI+  +VPD V   +++ G  + G L  A
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 186/355 (52%), Gaps = 6/355 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWV--YRKIEVLPAIQ--ACNALLNGLIKKGKFDSV 103
           F P V  +ST+I    + G + EAL +  ++ IE   +    A NAL+NGL K    +  
Sbjct: 109 FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERA 168

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           ++  EEM   G V D +TY  ++   C  G V +A   FD M  +G  P VV Y  L+  
Sbjct: 169 YKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA 228

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           L  E K  EA  +F+ +   G +P+  TYN+++ G  + ++++ A E + +M+     PN
Sbjct: 229 LYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+ +++ G C+  ++  A      M+K G  P++  YN L+DG CK   + +A  L S
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M     +PD+ +Y++++ GLC   ++  A  L  +M +  ++ +VVT+N L+DG CK G
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            +++A  +  QMT  G  P+ V +++L++G  K G    A  L   M  K  + D
Sbjct: 409 KLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 173/321 (53%), Gaps = 7/321 (2%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN + +  ++   CK G L +   L  +M    ISPD   YNILI G    G+++ A  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M   G+  ++ TYNSL++ +CKE  M++A+ +   M EKG EP+VVT+S++I G CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 377 AGNIDAAMG-LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            G +  A+  L+ +M+ +    + V + ALI+GL KD N++   +L +EM      P   
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++++ GL + G++S A  FF     +   GY SP+ V Y  ++ AL  +G+  +A KL
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSR---GY-SPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F D+ +    PD  TY ++L GL R   M +   +   M+  G  P+     +++ G+  
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 556 NGDLKSAFRCSEFLKESRIGS 576
              +  A +  E +  S+IG+
Sbjct: 302 AKKVDDAHKVLEEM--SKIGA 320



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 5/275 (1%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           E SP+ +T+ +++K  C  G+L     L ++M   GI  + + YN LIDGY K+G +++A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M   G+EP++ T++SL++  CK   +  AM L+  M  K   PDVV ++ +I G
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 409 LSKDGNMKETLR-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           L K G + E L  L+ +M+E   + +    ++LI+GL K+  I  A     E   K   G
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK---G 179

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           Y  P+++ Y  I+  LC  G++ +A + F  M S    PD   Y  +L  L +  +  + 
Sbjct: 180 YV-PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           M L  D+I  G +PD V    ++ G     ++  A
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
            +S+    ++P V  ++ L+ A  + G  +EA+ +++ +     +P     N++L GL +
Sbjct: 207 FDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           K   D   E +++MV  G   +  TY +++   C    V  A  + +EM   G  P VV 
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y IL+ GLC  N + +A  +F +M + G  P++ +Y+ +++G CK   V+ A   +  M+
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              L P+VVTF +LMDGLCK G+L  A +    M   G  P+   YN L++G  K G   
Sbjct: 387 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHI 446

Query: 277 EAMSLCSEMEKFEISPDVF 295
           +A  L   M++     D F
Sbjct: 447 QADRLTQAMKEKGFLSDCF 465



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/103 (21%), Positives = 47/103 (45%)

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSPN   +  ++++ C  G++    KLF  M  + + PD   Y  ++ G  +  R+ +  
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            L  +M+ +G+ P       ++  + +   +K A    + + E
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE 106


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 253/497 (50%), Gaps = 8/497 (1%)

Query: 66  GHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G + EA+ + R++       P   + N ++ G+ + G+     E ++EM    ++ + +T
Sbjct: 41  GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 100

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +ID     GD+     L D+M+  G++P  + Y +L+ GLC   +M E  ++   M 
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              +VP+ +TY+ L DG  +  D    L  + + L + +     T  +L++GLCK G++ 
Sbjct: 161 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 220

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      +   G+ P   +YN LI+G+C+ G L  A S   +M+   I PD  TYN LI
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC   ++  A+ LL +M   G+   V T+N+LID Y + G +EK   V S+M E G++
Sbjct: 281 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVV++ S+++  CK G I  A+ +  +M  K ++P+  V+ A+ID   + G   +   L
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++M    I+PS+ T + LI GL    +IS A     E  +        P+ V Y  +I 
Sbjct: 401 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLIPDAVSYNTLIS 456

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A CY G I KA  L   M    ++    TY  ++ GL  A R+ ++  L   M++  +VP
Sbjct: 457 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 516

Query: 542 DAVINQVMVRGYQENGD 558
              I+ +MV  Y + G+
Sbjct: 517 SNAIHNIMVEAYSKYGN 533



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 240/497 (48%), Gaps = 5/497 (1%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEP 152
           L+  G+   V   +  +   G   D   +   +  C   GD+ +A+ +   M  D    P
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y ++I G+    +  +A  +F  M E  V+PN  TYN ++DG+ K  D+       
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M+ H L+PN +T+ VL+ GLC+ G +         MA   + P+ F Y+ L DG  + 
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G+    +SL  +  K  ++   +T +IL+ GLC  G++  AE +LQ +   G++   V Y
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI+GYC+ G++E A S   QM  + ++P+ +T+++LI+G CKA  I  A  L  EM  
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + P V  F  LID   + G +++   +  EM E  + P+V +  S+++   KNG+I  
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A+    +   K       PN  +Y AII A    G   +A  L   M+S+ + P   TY 
Sbjct: 362 AVAILDDMFHKD----VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 417

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +++GL    ++ +   ++  +    ++PDAV    ++      G++  A    + + + 
Sbjct: 418 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 477

Query: 573 RIGSSETEGHTTRSFLG 589
            I S+    H   S LG
Sbjct: 478 GIKSTVRTYHQLISGLG 494



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 197/379 (51%), Gaps = 3/379 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    S  G  +  L +   Y K  V      C+ LLNGL K GK     E  + +
Sbjct: 170 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 229

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C  G++  A + F +M  + I+P  + Y  LI+GLC   ++
Sbjct: 230 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 289

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+ +   M++ GV P + T+N L+D Y +   + +      EM  + L+PNVV++G +
Sbjct: 290 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 349

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++  CK G++  A      M    V PN  VYN +ID + + G   +A  L  +M+   I
Sbjct: 350 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 409

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP + TYN+LIKGLC   Q+  AE ++  +    ++ + V+YN+LI   C  G+++KAL 
Sbjct: 410 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G++  V T+  LI G   AG ++    LY +M+  ++VP   +   +++  S
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 529

Query: 411 KDGNMKETLRLYKEMLEAK 429
           K GN  +   L KEML+ +
Sbjct: 530 KYGNEIKAEDLRKEMLQKR 548


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 169/513 (32%), Positives = 250/513 (48%), Gaps = 61/513 (11%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    K +  +  ++EM + G+  DV TY +LID  C  G + +A  
Sbjct: 220 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 279

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF+EM   G  PTVV YT LIH      ++ +A  +F  M + G  PN  TY AL+DG C
Sbjct: 280 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 339

Query: 201 KVADVNRALEFYHEML----------------HHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++++A E Y +++                 H L PNVVT+G L+DGLCK  ++  A 
Sbjct: 340 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 399

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  PN  VY+ LIDG CKAG +  A  +  +M K    P V TY  LI  +
Sbjct: 400 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 459

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G+L+ A  +L +M K+    NVVTY ++IDG C+ G+ EKAL + S M EKG  PNV
Sbjct: 460 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 519

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD----------GN 414
           VT+++LIDG  KAG ID ++ L+T+M  K   P+ V +  LI+ L             G 
Sbjct: 520 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 579

Query: 415 MKET-----------------------LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           MK+T                       L + +EM      P       LI    K GR+ 
Sbjct: 580 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 639

Query: 452 NALNFFLEKTD-----KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            A+    E  +     KTD         +YA++IQALC   Q+ +A +L+S+M      P
Sbjct: 640 IAMELHKEMMEVPSSVKTDND-------MYASLIQALCLASQVEEAFRLYSEMTRRGFVP 692

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +   +  +++GL+  K+  + + L   +   G+
Sbjct: 693 ELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 245/550 (44%), Gaps = 31/550 (5%)

Query: 40  NALNSLEIPKFN-PSVFST-LIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL 94
           +AL+ +E   F   +V  T +I    E  + +EA+    ++     +P +     LL+G 
Sbjct: 28  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 87

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           +KK +          M+  G   +   +  L+   C + D   A  L + M   G  P  
Sbjct: 88  LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 147

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           V+Y I I  +C + K+        AE ++  M     V N           C V   ++A
Sbjct: 148 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 207

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM+     P+  T+  ++  LC   ++  A   F  M   GV P+++ Y  LID 
Sbjct: 208 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 267

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A  L  EM     SP V TY  LI       Q+  A  +  +M   G   N
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMT----------------EKGVEPNVVTFSSLID 372
            VTY +L+DG CK G++ KA  V +++                    + PNVVT+ +L+D
Sbjct: 328 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 387

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKA  +D A  L   M+     P+ +V+ ALIDG  K G +     ++ +M +    P
Sbjct: 388 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 447

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T +SLI  +FK+GR+  A+    +    +    C+PN V Y A+I  LC  G+  KA
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS----CTPNVVTYTAMIDGLCRIGESEKA 503

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            KL S M      P+  TYT ++ GL +A ++   + L   M + G  P+ V  +V++  
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563

Query: 553 YQENGDLKSA 562
               G L  A
Sbjct: 564 LCAAGLLDKA 573



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 235/527 (44%), Gaps = 29/527 (5%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C  +++GL++   FD    F   M     + +VVTY  L+     +  +     + + M+
Sbjct: 45  CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 104

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV- 205
            +G  P   ++  L+H  CNE     A  +   M  CG  P    YN  +   C    + 
Sbjct: 105 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP 164

Query: 206 -----NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A + Y EML  N   N V        LC VG+   A      M + G  P+  
Sbjct: 165 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 224

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +I   C A  + +A  L  EM+   ++PDV+TY ILI   C  G +E A+ L ++M
Sbjct: 225 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G    VVTY +LI  Y K   + +A  +  +M + G  PN VT+ +L+DG CKAGNI
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 344

Query: 381 DAAMGLYTEMVIKS----------------LVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             A  +Y +++  S                L P+VV + AL+DGL K   +     L   
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML +   P+     +LI G  K G+I +A   FL+    T  GY    H  Y ++I  + 
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ---MTKCGYLPSVHT-YTSLIDRMF 460

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            DG++  A K+ S M  D+  P+  TYT M+ GL R       + LL+ M + G  P+ V
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
               ++ G  + G +  +     F + SR G S     T R  + HL
Sbjct: 521 TYTALIDGLGKAGKIDLSL--DLFTQMSRKGCSPNY-VTYRVLINHL 564



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 208/515 (40%), Gaps = 64/515 (12%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   D  T G      C +G    AL++ +    +  +   V+ T +I GL   +   EA
Sbjct: 5   GFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEA 61

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            S    MR    +PN+ TY  L+ G+ K   +       + M+     PN   F  L+  
Sbjct: 62  MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 121

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG------------------------- 268
            C   +   A      M   G  P   VYN  I                           
Sbjct: 122 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 181

Query: 269 ----------------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
                            C  G   +A  L  EM +    PD  TY+ +I  LC   ++E 
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L Q+M   G+  +V TY  LID +CK G +E+A  +  +M   G  P VVT+++LI 
Sbjct: 242 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML------ 426
              KA  +  A  ++  MV     P+ V + AL+DGL K GN+ +   +Y +++      
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361

Query: 427 ----------EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
                        + P+V T  +L+ GL K  ++ +A     E  D      C PNH++Y
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA----HELLDAMLSSGCEPNHIVY 417

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            A+I   C  G+I  A ++F  M      P   TYT+++  + +  R+   M +L+ M+K
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
               P+ V    M+ G    G+ + A +    ++E
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 512



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 140/315 (44%), Gaps = 7/315 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+  LI  F + G I+ A  V+    K   LP++    +L++ + K G+ D   +  
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 472

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+      +VVTY  +ID  C  G+  KAL L   M +KG  P VV YT LI GL   
Sbjct: 473 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 532

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  +  +F  M   G  PN  TY  L++  C    +++A     EM        +  +
Sbjct: 533 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 592

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              + G  K     A+      M  +G  P   VY  LID   KAG L  AM L  EM +
Sbjct: 593 RCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650

Query: 288 F--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               +  D   Y  LI+ LC   Q+E A  L  +M + G +  +  +  LI G  +    
Sbjct: 651 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710

Query: 346 EKALSVCSQMTEKGV 360
           ++AL +C  +  +GV
Sbjct: 711 DEALQLCYGICHEGV 725



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 52/371 (14%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M++ G   + F   C     CK G   +A+ +  E E F++   + T+  +I GL     
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMI-EREDFKLDTVLCTH--MISGLMEASY 57

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A   L +M     + NVVTY +L+ G+ K+  +     + + M  +G  PN   F+S
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL-------SKD---------- 412
           L+   C   +   A  L   M      P  VV+   I  +       S D          
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 413 ------------------------GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
                                   G   +  +L KEM+     P   T S +I  L    
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           ++  A   F E   K  G   +P+   Y  +I + C  G I +A  LF +MRS    P  
Sbjct: 238 KVEKAFLLFQEM--KMVG--VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TYT ++   L+AK++     +   M+  G  P+ V    +V G  + G++  AF     
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 569 LKESRIGSSET 579
           L    IG+S++
Sbjct: 354 L----IGTSDS 360


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 267/524 (50%), Gaps = 11/524 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  E+A   L   R+   +P++ + N +L+ L +KG+ D   + +EEM
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                + ++ TY ++ID  C  G +  AL + D M D G+ P V+   I++  LC   ++
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S+F  +      P+  TY +L++G  +   V+ A + Y +ML  N  PN V +  L
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K G        +  M + G  P++ + N  +D   KAG + +  +L  E++    
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y ILI GL   G    A  L   M ++G + +   YN++IDG+CK G + KA  
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG EP VVT+ S+IDG  K   +D A  L+ E   K +  +VV++++LIDG  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +E+++  +TP+V+T + L+  L K   IS AL  F    D      C+
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK----CT 756

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN++ Y+ +I  LC   +  KA   + +M+    +P+  TYTTM+ GL +A  +++   L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                + G V D+ I   ++ G         A+R     +E+R+
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR---LFEEARL 857



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 237/501 (47%), Gaps = 13/501 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+   C  ++   IK  K    + F + M           Y  LI       D    L L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +M + G    V ++T LI     E ++  A S+   M+   + P++  YN  +D + K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+ A + +HEM  + L  + VT+  ++  LCK   L  A   F HM +    P  + 
Sbjct: 283 AGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +I G+  AG   +A SL     +    P V +YN ++  L   GQ++ A    ++M 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+ I  N+ TYN +ID  CK G +E AL V   M + G+ PNV+T + ++D  CKA  +D
Sbjct: 403 KDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  +  K+  PD V + +LI+GL + G + E  +LY++ML+A   P+    +SLI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
              FK GR  +    + E         CSP+ +L    +  +   G+I K   LF ++++
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLG----CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN 577

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  +YT ++ GL++A    +   L   M + G V D      ++ G+ ++G +  
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK 637

Query: 562 AFRCSEFLKESRIGSSETEGH 582
           A++  E +K        T+GH
Sbjct: 638 AYQLLEEMK--------TKGH 650



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 246/527 (46%), Gaps = 10/527 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
           L  + I  F PS  +   ++++F +   + EA   +   RK++  PA  A   L+  L  
Sbjct: 153 LEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST 212

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
               D +   +++M   G   +V  +  LI     +G V  AL+L DEM    +EP VV+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVL 272

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y + I       K+  A   F  M+  G+V +  TY +++   CK   +N A+E +  M 
Sbjct: 273 YNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            +   P    +  ++ G    G+   A +      + G  P++  YNC++    + G + 
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+    EM+K  I P++ TYNI+I  LC  G+LE A  +   M   G+  NV+T N ++
Sbjct: 393 EALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D  CK   ++ A S+   +  K   P+ VT+ SLI+G  + G +D A  LY +M+  + +
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+ VV+T+LI    K G  ++  ++Y EML    +P +  +++ +  +FK G I      
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E  +    G+  P+   Y  +I  L   G   +A +LF  M+      D   Y T++ 
Sbjct: 572 FQEIKNL---GFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           G  ++ ++     LL +M   G  P  V    ++ G  +   L  A+
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 214/484 (44%), Gaps = 40/484 (8%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLI 95
           F  +    IP  N S ++ +I    + G +E AL V   ++   + P +   N +++ L 
Sbjct: 398 FEEMKKDAIP--NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC 455

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K  + D     +E +       D VTY  LI+     G V +A  L+++M+D    P  V
Sbjct: 456 KAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAV 515

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +YT LI       +  +   ++  M   G  P+L   N  MD   K  ++ +    + E+
Sbjct: 516 VYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI 575

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
            +    P+  ++ +L+ GL K G    A   F  M + G   +   YN +IDG CK+G +
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L  EM+     P V TY  +I GL  + +L+ A  L ++   +GI  NVV Y+SL
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNV------------------------------- 364
           IDG+ K G +++A  +  ++ +KG+ PNV                               
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 365 ----VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
               +T+S LI G CK    + A   + EM  +   P+V  +T +I GL+K GN+ E   
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+++  E          +++I GL    R S+A   F E   K    Y     VL  ++ 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 481 QALC 484
           +A C
Sbjct: 876 KAEC 879



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 157/321 (48%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G IE+   ++++I+ L   P  ++   L++GL+K G     +E +  M   G V D   Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +ID  C  G V KA  L +EM  KG EPTVV Y  +I GL   +++ EA  +F   + 
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  N+  Y++L+DG+ KV  ++ A     E++   L PNV T+  L+D L K  E+  
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M      PN   Y+ LI G CK     +A     EM+K    P+VFTY  +I 
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G +  A+ L +K  ++G +A+   YN++I+G         A  +  +   KG   
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
              T   L+D   KA  I+ A
Sbjct: 863 YTKTCVVLLDSLHKAECIEQA 883



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 152/306 (49%), Gaps = 3/306 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI    + G   EA  ++  ++    +   +A N +++G  K GK +  ++  EEM 
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G    VVTYG +ID       + +A  LF+E   KGIE  VVIY+ LI G     ++ 
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   + + G+ PN+YT+N L+D   K  +++ AL  +  M      PN +T+ +L+
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLCK+ +   A  F+  M K G  PN+F Y  +I G  KAGN+ EA +L  + ++    
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D   YN +I+GL    +   A  L ++   +G      T   L+D   K   +E+A  V
Sbjct: 827 ADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIV 886

Query: 352 CSQMTE 357
            + + E
Sbjct: 887 GAVLRE 892


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 266/514 (51%), Gaps = 17/514 (3%)

Query: 65  MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           +G + +    + ++ V    ++ N L+N L + GK          M   G + DVV+Y  
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +ID  C  G++ K + L  EM  KG++P +  Y+ +I  LC   K+VE E + R M + G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V P+   Y  L+DG+CK+ +   A + + EM    + P+ + F  L+ GL   G++  A 
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M K G  P+   Y  LIDG+CK G + +A  L ++M +  ++P+V TY  L  GL
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G+L+ A  LL +M ++G+  N+ TYN++++G CK G++ +A+ +  +M E G+ P+ 
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           +T+++L+D   K G +  A  L  EM+ + L P VV F  L++GL   G +++  RL K 
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 425 MLEAKITPSVFTVSSLI--HGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAA 478
           MLE  I P+  T +S++  + +  N RIS  +            G C+    P+   Y  
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY----------RGMCAQGVVPDSNTYNI 500

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I+  C    + +A  L  +M          +Y  +++G  + K++L+   L  +M + G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
           +V  A I  + V    E G++++    C E +++
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 261/507 (51%), Gaps = 7/507 (1%)

Query: 68  IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
           +E  ++ Y+     P +   +     L++ G  +   +F+++++  G+     +  + + 
Sbjct: 25  VERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT 82

Query: 128 CCCGQGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
           C   + D++   L +F E    G+      Y IL++ L    K+ EA  +   M   G +
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ +Y  ++DGYC V ++ + ++   EM    L+PN+ T+  ++  LCK G++      
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M K GVFP+  +Y  LIDG CK GN   A  L SEME  EI PD   ++ LI GL G
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G++  A+ L  +M K+G   + VTY +LIDGYCK G+M+KA  + +QM + G+ PNVVT
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++L DG CK+G +D A  L  EM  K L  ++  +  +++GL K GN+ + ++L +EM 
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           EA + P   T ++L+   +K G +  A     E  D+       P  V +  ++  LC  
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG----LQPTVVTFNVLMNGLCMS 438

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++    +L   M    + P+  TY ++++       M     +   M   G+VPD+   
Sbjct: 439 GKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTY 498

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESR 573
            ++++G+ +  ++K A+   + + E R
Sbjct: 499 NILIKGHCKARNMKEAWFLHKEMVEKR 525



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/438 (33%), Positives = 233/438 (53%), Gaps = 12/438 (2%)

Query: 27  KSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL--- 81
           K R+ HH+       L  +E     P V  ++T+I  +  +G +++ + + +++++    
Sbjct: 125 KIREAHHL-------LMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLK 177

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   ++++  L K GK     +   EM+  G+  D V Y  LID  C  G+   A  L
Sbjct: 178 PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKL 237

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM  + I P  + ++ LI GL    K+VEA+ +F  M + G  P+  TY AL+DGYCK
Sbjct: 238 FSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + ++ +A   +++M+   L PNVVT+  L DGLCK GEL  A      M + G+  NI  
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +++G CKAGN+ +A+ L  EM++  + PD  TY  L+      G++  A  LL++M 
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+   VVT+N L++G C  G +E    +   M EKG+ PN  T++S++   C   N+ 
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            +  +Y  M  + +VPD   +  LI G  K  NMKE   L+KEM+E +   +  + ++LI
Sbjct: 478 ISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALI 537

Query: 442 HGLFKNGRISNALNFFLE 459
            G FK  ++  A   F E
Sbjct: 538 KGFFKRKKLLEARQLFEE 555



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 211/418 (50%), Gaps = 3/418 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +S++I+   + G + E   V R   K  V P       L++G  K G   + ++
Sbjct: 177 KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYK 236

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM    +V D + +  LI    G G V++A  LF+EMI KG EP  V YT LI G C
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYC 296

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +M +A  +   M + G+ PN+ TY AL DG CK  +++ A E  HEM    LQ N+ 
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS 356

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  +++GLCK G +  A      M + G+ P+   Y  L+D + K G + +A  L  EM
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + P V T+N+L+ GLC  G+LE  E LL+ M ++GI+ N  TYNS++  YC   +M
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             +  +   M  +GV P+  T++ LI G CKA N+  A  L+ EMV K        + AL
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNAL 536

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           I G  K   + E  +L++EM    +  S    +  +   ++ G +   L    E  +K
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 241/468 (51%), Gaps = 15/468 (3%)

Query: 46  EIPK----FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKG 98
           E P+    +N   ++ L+ +   +G I EA  +  ++E    +P + +   +++G    G
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +   V +  +EM L GL  ++ TY  +I   C  G V++   +  EM+ +G+ P  VIYT
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYT 219

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LI G C       A  +F  M    +VP+   ++AL+ G      V  A + ++EM+  
Sbjct: 220 TLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK 279

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVH--MAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +P+ VT+  L+DG CK+GE++ A  FF+H  M + G+ PN+  Y  L DG CK+G L 
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKA--FFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L  EM +  +  ++ TYN ++ GLC  G +  A  L+++M + G+  + +TY +L+
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D Y K G+M KA  +  +M ++G++P VVTF+ L++G C +G ++    L   M+ K ++
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   + +++       NM+ +  +Y+ M    + P   T + LI G  K   +  A   
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             E  +K      S     Y A+I+      ++L+A +LF +MR + L
Sbjct: 518 HKEMVEKRFNLTASS----YNALIKGFFKRKKLLEARQLFEEMRREGL 561



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 221/432 (51%), Gaps = 13/432 (3%)

Query: 147 DKGIEPTV--VIYTILIH-GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           D G +P V  V + +L+  GL NE     A   F  +   GV  +  + N  +       
Sbjct: 34  DWGSDPHVFDVFFQVLVEAGLLNE-----ARKFFDKLLNYGVALSAGSCNLYLTCLSSKR 88

Query: 204 D-VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
           D +   L+ + E     +  N  ++ +LM+ L ++G++R A +  + M   G  P++  Y
Sbjct: 89  DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSY 148

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             +IDG+C  G L + + L  EM+   + P+++TY+ +I  LC  G++   E +L++M K
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G+  + V Y +LIDG+CK G+ + A  + S+M  + + P+ + FS+LI G   +G +  
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L+ EM+ K   PD V +TALIDG  K G MK+   L+ +M++  +TP+V T ++L  
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K+G +  A     E   K        N   Y  I+  LC  G IL+A KL  +M+  
Sbjct: 329 GLCKSGELDTANELLHEMCRKG----LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L PD  TYTT++    +   M+    LL +M+  G+ P  V   V++ G   +G L+  
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444

Query: 563 FRCSEFLKESRI 574
            R  +++ E  I
Sbjct: 445 ERLLKWMLEKGI 456



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 4/367 (1%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNA 89
              Y +F+ + + EI   +   FS LI   S  G + EA  ++    K    P      A
Sbjct: 232 QAAYKLFSEMEAREIVP-DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++G  K G+    +  + +MV  GL  +VVTY  L D  C  G++  A  L  EM  KG
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++  +  Y  +++GLC    +++A  +   M+E G+ P+  TY  LMD Y K  ++ +A 
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   EML   LQP VVTF VLM+GLC  G+L         M + G+ PN   YN ++  +
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C   N+  +  +   M    + PD  TYNILIKG C    ++ A  L ++M ++      
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTA 530

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            +YN+LI G+ K   + +A  +  +M  +G+  +   ++  +D   + GN++  + L  E
Sbjct: 531 SSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590

Query: 390 MVIKSLV 396
            + K L+
Sbjct: 591 AIEKCLL 597


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 266/516 (51%), Gaps = 14/516 (2%)

Query: 10  LYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIE 69
           LY +A+ L+  V    ++S+       S+ + L   E  K    ++  +I A+ +   ++
Sbjct: 54  LYSHAQSLLLQVISGKIQSQ--FFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLD 111

Query: 70  EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            +++ + ++     +P     N LL  ++    F+  W F+ E  +  +V DV ++G++I
Sbjct: 112 SSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI-KVVLDVYSFGIVI 170

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             CC  G++ K+ +L  E+ + G  P VVIYT LI G C + ++ +A+ +F  M + G+V
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV 230

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
            N +TY  L+ G  K     +  E Y +M  H + PN+ T+  +M+ LCK G  + A   
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKV 290

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + GV  NI  YN LI G C+     EA  +  +M+   I+P++ TYN LI G CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCG 350

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           V +L  A  L + +   G+  ++VTYN L+ G+CK+GD   A  V  +M E+G++P+ VT
Sbjct: 351 VRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVT 410

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ LID   ++ N++ A+ L + M    L PDV  ++ LI G    G M E  RL+K M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMV 470

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E K  P+    ++++ G  K G    AL  F E  +K       PN   Y  +I+ LC +
Sbjct: 471 EKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE----LPPNVASYRYMIEVLCKE 526

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
            +  +A  L   M    + P +    ++L  + RAK
Sbjct: 527 RKSKEAEGLVEKMIDSGIGPSD----SILNLISRAK 558



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 5/419 (1%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +Y ++I+       +  +   F  M + G VP    +N L+      +  N+   F++E 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               +  +V +FG+++ G C+ GE+  + +  V + +FG  PN+ +Y  LIDG CK G +
Sbjct: 156 -KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L  EM KF +  + +TY +LI GL   G  +    + +KM + G+  N+ TYN +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ++  CK+G  + A  V  +M E+GV  N+VT+++LI G C+    + A  +  +M    +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+++ +  LIDG      + + L L +++    ++PS+ T + L+ G  K G  S A  
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++       P+ V Y  +I        + KA +L S M    L PD  TY+ ++
Sbjct: 395 VVKEMEERG----IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            G     RM +   L   M++    P+ VI   MV GY + G    A R    ++E  +
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 5/387 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  +++ Y +   ++ ++ +++EM+     P    F  L+  +           FF + +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF-NES 155

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K  V  +++ +  +I G C+AG + ++  L  E+ +F  SP+V  Y  LI G C  G++E
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ L  +M K G++AN  TY  LI G  K G  ++   +  +M E GV PN+ T++ ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +  CK G    A  ++ EM  + +  ++V +  LI GL ++    E   +  +M    I 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++ T ++LI G     ++  AL+  L +  K+ G   SP+ V Y  ++   C  G    
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALS--LCRDLKSRG--LSPSLVTYNILVSGFCKKGDTSG 391

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A K+  +M    ++P   TYT ++    R+  M   + L + M ++G+ PD     V++ 
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIH 451

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSE 578
           G+   G +  A R  + + E +   +E
Sbjct: 452 GFCIKGRMNEASRLFKSMVEKKFEPNE 478



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 164/318 (51%), Gaps = 5/318 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y  +I+ + ++ +L  ++   +EM      P    +N L+  + G            + 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  ++ +V ++  +I G C+ G++EK+  +  ++ E G  PNVV +++LIDG CK G I
Sbjct: 156 -KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  L+ EM    LV +   +T LI GL K+G  K+   +Y++M E  + P++ T + +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++ L K+GR  +A   F E  ++  G  C  N V Y  +I  LC + +  +A+++   M+
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRER--GVSC--NIVTYNTLIGGLCREMKANEANEVMDQMK 330

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           SD + P+  TY T++ G    +++   + L  D+   G+ P  V   ++V G+ + GD  
Sbjct: 331 SDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 561 SAFRCSEFLKESRIGSSE 578
            A +  + ++E  I  S+
Sbjct: 391 GAGKVVKEMEERGIKPSK 408


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 261/509 (51%), Gaps = 11/509 (2%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC--NALLNGLIKKGKFDSVW 104
           P  F+   ++ A    G ++ AL + R++   E  P   A   N ++ GL + GK     
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + ++EMV  G+  + +TY  +ID     GD+     L D+M+  G +P VV Y +L+ GL
Sbjct: 215 KVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGL 274

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +M E  ++   M    ++P+ +TY+ L DG  +  +    L  + E L   +    
Sbjct: 275 CRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGA 334

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T  +L++GLCK G++  A   F  +   G+ P   +YN LI+G+C+  +L  A  +  +
Sbjct: 335 YTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+   I PD  TYN LI GLC +  +  AE L+ +M K G+  +V T+N+LID Y   G 
Sbjct: 395 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +EK  +V S M +KG++ +V++F S++   CK G I  A+ +  +M+ K + P+  V+ +
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +ID   + G+ ++ L L ++M  + ++ S+ T + L+ GL ++ +I  A       T + 
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY--TLRN 572

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
            G    P+ V Y  II A C  G   KA +L  +M    +RP   T  T++  L  A R+
Sbjct: 573 QG--LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRV 630

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            D+  L   M+   + P + I  +MV  Y
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 233/493 (47%), Gaps = 9/493 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++ +CN LL  L+  G+   V   +  +V  G   D   +  ++  C   GD+  AL 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 141 LFDEM--IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           +   M   +    P    Y ++I GL    K  +A  +F  M + GV PN  TYN ++DG
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K  D+        +MLH   +PNVVT+ VL+ GLC+ G +         MA   + P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            F Y+ L DG  + G     +SL +E  K  +    +T +IL+ GLC  G++  A+ + +
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            +   G++   V YN+LI+GYC+  D+  A  +  QM  + + P+ +T+++LI+G CK  
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L  EM    + P V  F  LID     G +++   +  +M +  I   V +  
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++    KNG+I  A+    +   K      +PN  +Y +II A    G   +A  L   
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKD----VAPNAQVYNSIIDAYIESGDTEQALLLVEK 534

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M++  +     TY  +L+GL R+ ++ +   L+  +   G+ PD V    ++      GD
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 559 LKSAFRCSEFLKE 571
              A    E L+E
Sbjct: 595 TDKAL---ELLQE 604



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 3/381 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    +  G  +  L ++    K  V+     C+ LLNGL K GK     + +E +
Sbjct: 301 TYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEML 360

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C   D+  A  +F++M  + I P  + Y  LI+GLC    +
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMV 420

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M + GV P++ T+N L+D Y     + +      +M    ++ +V++FG +
Sbjct: 421 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 480

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK G++  A      M    V PN  VYN +ID + ++G+  +A+ L  +M+   +
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGV 540

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S  + TYN+L+KGLC   Q++ AE L+  +  +G+  +VV+YN++I   C +GD +KAL 
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G+ P + T  +L+     AG +     LY +M+ K++ P   ++  ++D   
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 411 KDGNMKETLRLYKEMLEAKIT 431
           +  N  +   L KEM E  I 
Sbjct: 661 RCENDSKVASLKKEMSEKGIA 681



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 196/389 (50%), Gaps = 3/389 (0%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           PK N   ++ L+      G ++E   +  ++    +LP     + L +GL + G+  ++ 
Sbjct: 260 PKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + E +  G++    T  +L++  C  G V KA  +F+ ++  G+ PT VIY  LI+G 
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGY 379

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    +  A  +F  M+   + P+  TYNAL++G CK+  V +A +   EM    + P+V
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF  L+D     G+L         M + G+  ++  +  ++   CK G + EA+++  +
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +++P+   YN +I      G  E A  L++KM   G+ A++VTYN L+ G C+   
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A  +   +  +G+ P+VV+++++I   C  G+ D A+ L  EM    + P +     
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHT 619

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           L+  L+  G + +   LY++ML   + PS
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPS 648


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 156/498 (31%), Positives = 254/498 (51%), Gaps = 8/498 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K + + F+ LI A      I  A+ +  ++    + P  +    L+ G I++G  +    
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALR 267

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             E+MV  G  +  VT  VL+   C +G + + L+  DEM ++G  P    +  L++GLC
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +  A  +   M + G  P+++TYN+L+ G CK+ +V  A+E  ++M+  +  PN V
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+  LCK  ++  A      +   G+ P++  +N LI G C   N   AM L  EM
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +     PD FTYN+LI  LC  G+LE A  LL++M   G   NVVTYN+LIDG+CK   +
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E+A  +  +M  +G+  NVVT+++LIDG CK   ++ A  L  +M+++ L PD   + +L
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +    + G++K+   + + M      P   T  +LI GL K GR+  A      +T +  
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLL--RTVQLK 625

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           G   +P    Y  +I+AL  + +  +A +LF +M      PD  TY  + RGL      +
Sbjct: 626 GMVLAPQ--TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPI 683

Query: 526 -DVMMLLADMIKMGIVPD 542
            + +  L +M   G +PD
Sbjct: 684 GEAVDFLVEMTDKGFLPD 701



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 240/478 (50%), Gaps = 4/478 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   N L+  L +  +        EEM   GL  D  T+  L+     +G++  AL
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            + ++M+  G   + V   +L+HG C E ++ E  S    M   G  P+ +T+N+L++G 
Sbjct: 267 RIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGL 326

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C++  V  ALE    ML     P++ T+  L+ GLCK+GE+  A      M      PN 
Sbjct: 327 CRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNT 386

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LI   CK   + EA  L   +    I PDV T+N LI+GLC       A  L ++
Sbjct: 387 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE 446

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G   +  TYN LID  C  G +E+ALS+  +M   G   NVVT+++LIDG CK   
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I+ A  ++ EM ++ +  +VV +  LIDGL K+  ++E  +L  +ML   + P  FT +S
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+    + G I  A +    +T  ++G  C P+ V Y  +I  L   G++  AS+L   +
Sbjct: 567 LLTYFCRAGDIKKAADIV--QTMTSNG--CEPDSVTYGTLILGLSKAGRVELASRLLRTV 622

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +   +     TY  +++ L R KR  + + L  +M++ G  PDAV  +V+ RG    G
Sbjct: 623 QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 233/452 (51%), Gaps = 6/452 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFD-EMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           GL  D  TY  L++     G+ +K + + +  M+ +GI+P V  + ILI  LC  +++  
Sbjct: 171 GLKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRP 229

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  M   M   G+ P+  T+  LM G+ +  ++N AL    +M+      + VT  VL+ 
Sbjct: 230 AILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVH 289

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK G +    +F   M+  G  P+ F +N L++G C+ G++  A+ +   M +    P
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D+FTYN LI GLC +G++E A  +L +M       N VTYN+LI   CKE  +E+A  + 
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELA 409

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             +T KG+ P+V TF+SLI G C   N   AM L+ EM  K   PD   +  LID L   
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G ++E L L KEM  +  + +V T ++LI G  KN RI  A   F    D+ +    S N
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF----DEMELQGISRN 525

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I  LC + ++ +A++L   M  + L+PD  TY ++L    RA  +     ++ 
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQ 585

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            M   G  PD+V    ++ G  + G ++ A R
Sbjct: 586 TMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 252/537 (46%), Gaps = 21/537 (3%)

Query: 36  YSVFNALNSLEIPK-FNPSVFSTLIIAFSEMGHIEEAL-WVYRKIEVLPAIQACNALLNG 93
           +S  +   + ++P+ F P      +   S+   I + L W  ++   +P+      +L  
Sbjct: 55  FSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRK 114

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI------- 146
           L K G F S+    +EM   G      T+ +LI+             LFDE +       
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIES-------YAKFELFDEAVAVVDIME 167

Query: 147 -DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            + G++     Y  L++ L + NK+   E +   M   G+ P++ T+N L+   C+   +
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             A+    EM  + L P+  TF  LM G  + G +  A      M   G   +    N L
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           + G+CK G + E +S   EM      PD FT+N L+ GLC +G ++ A  +L  M +EG 
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             ++ TYNSLI G CK G++E+A+ + +QM  +   PN VT+++LI   CK   ++ A  
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L   +  K ++PDV  F +LI GL    N +  + L++EM      P  FT + LI  L 
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             GR+  AL+   E     +   CS N V Y  +I   C + +I +A ++F +M    + 
Sbjct: 468 SRGRLEEALSLLKE----MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  TY T++ GL + +R+ +   L+  M+  G+ PD      ++  +   GD+K A
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKA 580



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 195/427 (45%), Gaps = 43/427 (10%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F+P +F+  +LI    ++G +EEA+ +  ++   +  P     N L++ L K+ + +   
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E    +   G++ DV T+  LI   C   +   A+ LF+EM  KG  P    Y +LI  L
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  ++ EA S+ + M   G   N+ TYN L+DG+CK   +  A E + EM    +  NV
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+DGLCK   +  A      M   G+ P+ F YN L+   C+AG++ +A  +   
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE-- 342
           M      PD  TY  LI GL   G++E A  LL+ +  +G++    TYN +I    +E  
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646

Query: 343 --------------GDMEKALS-------VCS-------------QMTEKGVEPNVVTFS 368
                         GD   A++       +CS             +MT+KG  P+  +F 
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L +G C     D  + L   ++ ++   D  V  ++I G  K    ++ L     +L +
Sbjct: 707 MLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--SMIMGFLKIRKFQDALATLGRILSS 764

Query: 429 KITPSVF 435
           +     F
Sbjct: 765 REPKKAF 771



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 178/385 (46%), Gaps = 7/385 (1%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           ++   VP+   Y  ++    K            EM H   +    TF +L++   K  EL
Sbjct: 97  KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKF-EL 155

Query: 241 --RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
              A     +   +FG+  + F YN L++       L     + S M    I PDV T+N
Sbjct: 156 FDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFN 215

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           ILIK LC   Q+  A  ++++M   G+  +  T+ +L+ G+ +EG+M  AL +  QM   
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G   + VT + L+ G CK G I+  +    EM  +   PD   F +L++GL + G++K  
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L +   ML+    P +FT +SLI GL K G +  A+    +   +      SPN V Y  
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD----FSPNTVTYNT 391

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC + Q+ +A++L   + S  + PD CT+ ++++GL         M L  +M   G
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
             PD     +++      G L+ A 
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEAL 476


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 274/518 (52%), Gaps = 16/518 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY-------RKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            + T++    + G +EEAL V        +K++V+ A      L+ G   + +  +    
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVA----TTLMRGYCLRQEVGNALNL 319

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++E +  G+V   V YGVLI  C   G   KA  L  +M  +G+ P+    ++++ GL N
Sbjct: 320 FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLN 379

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + +  +A  +F  M + G+ P+++TYN L+  +C+   +  AL  +  M    ++P++ T
Sbjct: 380 DRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G CK G +  A   +  M   G  PN+  Y  L+ G+    +   A +L  EM+
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +S + +TYN+LI G+C V ++   +G+L+    EG +  ++TYNS+I+G+ K G M 
Sbjct: 499 QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMG 558

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A +V  QM EKG+ PN++T++S IDG C+ G  D A+ +  ++  + L PD+V + ALI
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALI 618

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +G  ++GNM   L+L   +L+  + P+    +SLI G +KN  +   ++ F E   K  G
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG-YKNLNMMKEVSKFYESMIK--G 675

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G  +     Y  +I     DG +  A +L+S+M +    PD  T+T +  GL R+  +  
Sbjct: 676 GIVADTST-YTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              LL +M ++ + P+  I  +++ GY  +  L+ AFR
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 240/479 (50%), Gaps = 9/479 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++  LI    ++G  ++A  + R++    +LP+    + +L GL+   ++      +EEM
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM 393

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  DV TY  LI   C    + +ALNLFD M   G++P++  Y  L+ G C +  M
Sbjct: 394 ADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  ++  M   G  PN+ TY  LM GY    D + A     EM  + +  N  T+ VL
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G+C V  +             G  P +  YN +I+G  KAG +  A ++  +M +  +
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ TY   I G C  G  + A  +L  + + G+  ++V YN+LI+G+C+EG+M  AL 
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   + + G+ PN V ++SLI G      +      Y  M+   +V D   +T LIDG S
Sbjct: 633 LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFS 692

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           KDGN+   L LY EM+     P  FT ++L HGL ++G I  A    LE+  + D     
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK-LLEEMRRLD---VR 748

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML-RGLLRAKRMLDVM 528
           PN  +Y  +I     D ++ +A +L  +M +  ++PD+ TY  ++ +  L A    DV+
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADVL 807



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 209/399 (52%), Gaps = 5/399 (1%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VF+   LI    +   + EAL ++   +K  V P+I   N+LL G  KKG  D   + 
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EM + G   +VVTY  L+     + D   A  L DEM   G+      Y +LI+G+C 
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +++ E + M +S    G +P + TYN++++G+ K   +  A   Y +M    L PN++T
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +   +DG C+ G    A      + + G+ P+I  YN LI+G C+ GN+  A+ L   + 
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K  ++P+   YN LI G   +  ++      + M K GI+A+  TY +LIDG+ K+G++ 
Sbjct: 639 KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVA 698

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL + S+M  KG  P+  TF++L  G C++G+ID A  L  EM    + P+V ++  LI
Sbjct: 699 FALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLI 758

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           +G  +D  ++E  RL+ EML   I P   T   L+   F
Sbjct: 759 NGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 237/539 (43%), Gaps = 39/539 (7%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P I++   LL    +          + EM   G   D   +  L+  C  +G    A+
Sbjct: 153 VVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAV 212

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LFDEM    I+P   +Y + I  LC       A  M R M+E G     +TY  ++D  
Sbjct: 213 RLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVL 272

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K   +  AL    EM     + +V+    LM G C   E+  A N F    K G+ P  
Sbjct: 273 VKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTK 332

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEM-------EKFEIS--------------------- 291
            +Y  LI G  + G   +A  LC +M         FE+S                     
Sbjct: 333 VMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEE 392

Query: 292 ------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 PDVFTYN LI   C   +L  A  L  +M K G+  ++ TYNSL+ GYCK+G M
Sbjct: 393 MADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A+ + S+M  +G +PNVVT+ +L+ G     + D A  L  EM    +  +   +  L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G+     + E   + K  +     P++ T +S+I+G  K G + +A   + +  +K  
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG- 571

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN + Y + I   C  G    A K+ +D+R   L+PD   Y  ++ G  +   M 
Sbjct: 572 ---LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
             + LL  ++K G+ P+ V+   ++ GY+    +K   +  E + +  I  ++T  +TT
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGI-VADTSTYTT 686



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 198/434 (45%), Gaps = 5/434 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A + +  M+ +G+ P +   T L+      +   +A ++F  MR  G   + + ++ALM 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
              K      A+  + EM    + P+   + + +  LCK+G+   A      M + G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
             F Y  ++D   K G + EA+ +  EM       DV     L++G C   ++  A  L 
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++  K+GI+   V Y  LI G  + G  +KA  +C QMT +G+ P+    S ++ G    
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
                A+ L+ EM   S +PDV  +  LI    +   ++E L L+  M +A + PS+ T 
Sbjct: 381 RRWKDAVCLFEEMA-DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTY 439

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SL+ G  K G +  A+  + E   +   G+  PN V Y  +++          A  L  
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPME---GF-KPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M+ + +  ++ TY  ++ G+    R+ +V  +L   +  G +P  +    ++ G+ + G
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 558 DLKSAFRCSEFLKE 571
            + SAF   + ++E
Sbjct: 556 MMGSAFTVYQQMRE 569



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 5/371 (1%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A + Y  M+   + P++ +   L+    +    + A   F+ M   G   + ++++ L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              K G   +A+ L  EM   EI PD   Y + I  LC +G    A  +L++M + G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
              TY +++D   K G ME+AL V  +M + G + +V+  ++L+ G C    +  A+ L+
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E +   +VP  V++  LI G  + G  ++   L ++M    + PS F +S ++ GL  +
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            R  +A+  F E  D        P+   Y  +I   C   ++ +A  LF  M+   ++P 
Sbjct: 381 RRWKDAVCLFEEMADSG-----LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TY ++L G  +   M + + L ++M   G  P+ V    ++RGY    D  +A+   +
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 568 FLKESRIGSSE 578
            +K++ +  ++
Sbjct: 496 EMKQNGVSCND 506


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 259/521 (49%), Gaps = 11/521 (2%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKK 97
           VF AL     P      ++T++  +   G IE+A  +   +   P     N L+  L  +
Sbjct: 209 VFAALG----PSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVR 264

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+       +++M+  G    VVTY +L+D  C +    +A+ L DEM  KG EP +V Y
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            +LI+ +CNE  + EA ++  ++   G  P+  TY  ++   C         E   EM  
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
           +N  P+ VTF  ++  LC+ G +  A     HM++ G   +I  Y+ ++DG C  G + +
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ L S ++ +   PD   Y  ++KGLC   Q E AE L+ +M       + VT+N+++ 
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             C++G +++A+ V  QM+E G  P++VT++ +IDG C    ID AM L +++      P
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D+V F  L+ GL      ++  +L   M+ +   P   T +++I  L + G ++ A+   
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
             K    +G  C PN   Y+ ++ AL   G+   A +L S M   N  PD  TY T++  
Sbjct: 625 --KIMAENG--CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISN 678

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENG 557
           L +A +M + + LL  M+  G+ PD    + +  G  +E+G
Sbjct: 679 LTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDG 719



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 234/497 (47%), Gaps = 9/497 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI A    G ++EAL +   +      P       +L  L    ++  V E   EM
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEM 382

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  D VT+  ++   C QG V +A+ + D M + G    +V Y+ ++ GLC+  ++
Sbjct: 383 TSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRV 442

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   ++  G  P+   Y  ++ G C      RA E   EML  +  P+ VTF  +
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTV 502

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC+ G +  A      M++ G  P+I  YNC+IDG C    + +AM L S+++    
Sbjct: 503 VASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGC 562

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ T+N L+KGLCGV + E AE L+  M +     + +T+N++I   C++G + +A+ 
Sbjct: 563 KPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIE 622

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
               M E G  PN  T+S ++D   KAG   AA+ L + M   +  PD++ +  +I  L+
Sbjct: 623 TLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNLT 680

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G M+E L L + M+   + P   T  SL +G+ +      A+       D       S
Sbjct: 681 KAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG----LS 736

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  ++   C D +   A   F+ M S    PD  TY  +L  L     + +   L
Sbjct: 737 PDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796

Query: 531 LADMIKMGIVPDAVINQ 547
           LA +  +G++   +I +
Sbjct: 797 LASLCSLGVLDKKLIEE 813



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 230/475 (48%), Gaps = 41/475 (8%)

Query: 132 QGDVMKALNLFDEMIDKGIE--PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           +G++ +AL LFD M   G    P VV   ILI  LC++ ++ +AE +F ++   G    +
Sbjct: 163 RGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATV 219

Query: 190 YTYNALMDGYC---KVADVNR-----------------------------ALEFYHEMLH 217
            TYN +++GYC   ++ D  R                             AL  + +MLH
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               P+VVT+ +L+D  CK    R A      M   G  P+I  YN LI+  C  G++ E
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+++ S +      PD  TY  ++K LCG  + +  E LL +M       + VT+N+++ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             C++G +++A+ V   M+E G   ++VT+SS++DG C  G +D A+ L + +      P
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D + +T ++ GL      +    L  EML +   P   T ++++  L + G +  A+   
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV 519

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            + ++      CSP+ V Y  II  LC +  I  A +L SD++S   +PD  T+ T+L+G
Sbjct: 520 EQMSENG----CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           L    R  D   L+A+M++    PD +    ++    + G L  A    + + E+
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 253/515 (49%), Gaps = 36/515 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+ A    G +EEA+ V    R     P     N L+    + G+ D      
Sbjct: 9   NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68

Query: 108 EEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             M   G    ++VT+  +++  C  G +  A  +FDEM+ +G+ P VV Y  L+ G C 
Sbjct: 69  SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + E+ ++F  M + G+VP++ T+ +L+   CK  ++ +A+    +M    L+ N VT
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DG CK G L  A      M K G+ P++  YN LI+G+CK G +  A  L  EME
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PDV TY+ +I G C VG L+ A  L QKM K+G+L + +TY+SLI G C+E  + 
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   M + GV+P+  T+++LIDG CK GN++ A+ L+ EM+ K ++PDVV ++ LI
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 368

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI----HGLFKNGRISNALNFFLEKTD 462
           +GLSK    KE  RL  ++      P      +L+       FK+               
Sbjct: 369 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS--------------- 413

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                          A+++  C  G + +A K++  M   N + D   Y+ ++ G  R  
Sbjct: 414 -------------VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 460

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +   +     M++ G  P++     +VRG  E G
Sbjct: 461 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 217/401 (54%), Gaps = 5/401 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+  G+ P V  Y IL+  LC   ++ EA  +   MR  G  PN  TYN L+  +C+  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 205 VNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           ++ A      M    N +PN+VTF  +++GLCK G +  A   F  M + G+ P++  YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+ G+CK G L E++++ SEM +  + PDV T+  LI   C  G LE A  L+ +M + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  N VT+ +LIDG+CK+G ++ AL    +M + G++P+VV +++LI+G CK G +D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L  EM  K + PDVV ++ +I G  K GN+    +L ++ML+  + P   T SSLI G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L +  R+++A   F             P+   Y  +I   C +G + KA  L  +M    
Sbjct: 301 LCEEKRLNDACELFENMLQLG----VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           + PD  TY+ ++ GL ++ R  +   LL  +     VPD +
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 397



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 5/382 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           GV PN+YTYN L+   C    +  A+    +M      PN VT+  L+   C+ GEL  A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 244 GNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
                 M + G   PN+  +N +++G CKAG +  A  +  EM +  ++PDV +YN L+ 
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           G C VG L  +  +  +M + G++ +VVT+ SLI   CK G++E+A+++ +QM E+G+  
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N VTF++LIDG CK G +D A+    EM    + P VV + ALI+G  K G M     L 
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM   ++ P V T S++I G  K G + +A     +   K       P+ + Y+++I+ 
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG----VLPDAITYSSLIRG 300

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC + ++  A +LF +M    ++PD  TYTT++ G  +   +   + L  +MI+ G++PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
            V   V++ G  ++   K A R
Sbjct: 361 VVTYSVLINGLSKSARTKEAHR 382



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 182/350 (52%), Gaps = 40/350 (11%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL--------- 300
           M + GV PN++ YN L+   C  G L EA+ +  +M     +P+  TYN L         
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 301 ---------------------------IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
                                      + GLC  G++EGA  +  +M +EG+  +VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +L+ GYCK G + ++L+V S+MT++G+ P+VVTF+SLI   CKAGN++ A+ L  +M  +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  + V FTALIDG  K G + + L   +EM +  I PSV   ++LI+G  K GR+  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
                E   K       P+ V Y+ II   C  G +  A +L   M    + PD  TY++
Sbjct: 241 RELIREMEAKR----VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++RGL   KR+ D   L  +M+++G+ PD      ++ G+ + G+++ A 
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 205/432 (47%), Gaps = 53/432 (12%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  + ++G + E+L V+ ++    ++P +    +L++   K G  +       +M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + VT+  LID  C +G +  AL   +EM   GI+P+VV Y  LI+G C   +M 
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R M    V P++ TY+ ++ GYCKV +++ A +   +ML   + P+ +T+  L+
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+   L  A   F +M + GV P+ F Y  LIDGHCK GN+ +A+SL  EM +  + 
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------------- 335
           PDV TY++LI GL    + + A  LL K+Y E  + + + Y++L                
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418

Query: 336 ----------------------------------IDGYCKEGDMEKALSVCSQMTEKGVE 361
                                             I G+C+ G++ KALS   QM   G  
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN  +  SL+ G  + G +  A     +++    + D     ALID   K+GN+   + +
Sbjct: 479 PNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDV 538

Query: 422 YKEMLEAKITPS 433
              M    + PS
Sbjct: 539 LCGMARDGLLPS 550



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 34/340 (10%)

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  ++P+V+TYNIL++ LC  G+LE A G++  M   G   N VTYN+L+  +C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 345 MEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++ A  V S M E+G  +PN+VTF+S+++G CKAG ++ A  ++ EMV + L PDVV + 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+ G  K G + E+L ++ EM +  + P V T +SLIH   K G +  A+    +  ++
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 464 T-----------DGGYC--------------------SPNHVLYAAIIQALCYDGQILKA 492
                         G+C                     P+ V Y A+I   C  G++  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +L  +M +  ++PD  TY+T++ G  +   +     L   M+K G++PDA+    ++RG
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
             E   L  A  C  F    ++G    E   T    GH K
Sbjct: 301 LCEEKRLNDA--CELFENMLQLGVQPDEFTYTTLIDGHCK 338


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 264/561 (47%), Gaps = 51/561 (9%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDS 102
           +P   P  F +LI +++ + +                 +P++ A NA+L  L       S
Sbjct: 115 LPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLAL-SDASLTS 173

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI- 161
              F++ M+  G+  +V TY +L+   CG+G   +AL++  +M   G  P VV Y  L+ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 162 ----------------------------------HGLCNENKMVEAESMFRSMRECGVVP 187
                                             +G+C   KM +A  +F  M   G+ P
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           +  +YN L+ GYCK    + AL  + EM    + P+VVTF  L+  +CK G L  A    
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G+  N   +  LIDG CK G L +A+     M++  I P V  YN LI G C V
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A  LL +M  +G+  +VVTY+++I  YCK  D   A  +  QM EKGV P+ +T+
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           SSLI   C    +  A  L+  M+   L PD   +T+LIDG  K+GN++  L L+ +M++
Sbjct: 474 SSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVK 533

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNA--LNFFLEKTDKTDGG-------YCSPNHVLYA- 477
           A + P V T S LI+GL K+ R   A  L F L   D            +C     L + 
Sbjct: 534 AGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSV 593

Query: 478 -AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            A+++  C  G + +A K++  M   N   D   Y+ ++ G  RA  ++  +     M++
Sbjct: 594 LALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 653

Query: 537 MGIVPDAVINQVMVRGYQENG 557
            G  P++     ++RG  ENG
Sbjct: 654 GGFAPNSTSTISLIRGLFENG 674



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 255/522 (48%), Gaps = 30/522 (5%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEF 106
           P+V++   L+ A    GH +EAL + R +      P +   N L+    + G+ D     
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   GL  ++VT+  +++  C  G +  A  +FDEM+ +G+ P  V Y  L+ G C 
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
                EA S+F  M + G++P++ T+ +L+   CK  ++ RA+    +M    LQ N VT
Sbjct: 308 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+DG CK G L  A      M +  + P++  YN LI+G+C  G + EA  L  EME
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PDV TY+ +I   C       A  L Q+M ++G+L + +TY+SLI   C E  + 
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   M + G++P+  T++SLIDG CK GN+++A+ L+ +MV   ++PDVV ++ LI
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH---------------GLFKNGRIS 451
           +GLSK     E  +L  ++      P+     +L+H               G    G ++
Sbjct: 548 NGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMN 607

Query: 452 NALNFFLEKTDKT---DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            A   +    D+    DG        +Y+ +I   C  G ++KA      M      P++
Sbjct: 608 EADKVYQSMLDRNWNLDGS-------VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNS 660

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +  +++RGL     +++   ++  ++    + DA  ++ ++
Sbjct: 661 TSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI 702



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 229/456 (50%), Gaps = 53/456 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+ AF   G ++ A   + + R+  + P +   N+++NG+ K GK +   + +
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 283

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  GL  D V+Y  L+   C  G   +AL++F EM  KGI P VV +T LIH +C  
Sbjct: 284 DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 343

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A ++ R MRE G+  N  T+ AL+DG+CK   ++ AL     M    ++P+VV +
Sbjct: 344 GNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCY 403

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C VG +  A      M   G+ P++  Y+ +I  +CK  +   A  L  +M +
Sbjct: 404 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 463

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  TY+ LI+ LCG  +L  A  L + M K G+  +  TY SLIDG+CKEG++E 
Sbjct: 464 KGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVES 523

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQ--------------------------------- 374
           ALS+  +M + GV P+VVT+S LI+G                                  
Sbjct: 524 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH 583

Query: 375 -----------------CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
                            C  G ++ A  +Y  M+ ++   D  V++ LI G  + GN+ +
Sbjct: 584 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 643

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  +K+ML+    P+  +  SLI GLF+NG +  A
Sbjct: 644 ALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEA 679



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/380 (34%), Positives = 208/380 (54%), Gaps = 5/380 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G VP++  YNA++      A +  A  F+  ML   + PNV T+ +L+  LC  G  + A
Sbjct: 151 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            +    M   G  PN+  YN L+    +AG +  A  L   M +  + P++ T+N ++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           +C  G++E A  +  +M +EG+  + V+YN+L+ GYCK G   +ALSV ++MT+KG+ P+
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF+SLI   CKAGN++ A+ L  +M  + L  + V FTALIDG  K G + + L   +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M + +I PSV   ++LI+G    GR+  A     E   K       P+ V Y+ II A 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG----LKPDVVTYSTIISAY 445

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +     A +L   M    + PD  TY++++R L   KR+ D  +L  +MIK+G+ PD 
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505

Query: 544 VINQVMVRGYQENGDLKSAF 563
                ++ G+ + G+++SA 
Sbjct: 506 FTYTSLIDGHCKEGNVESAL 525



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 5/318 (1%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  YN ++     A +L  A      M    ++P+V+TYNIL++ LCG G  + A
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L+ M   G   NVVTYN+L+  + + G+++ A  +   M E G++PN+VTF+S+++G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CKAG ++ A  ++ EMV + L PD V +  L+ G  K G   E L ++ EM +  I P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T +SLIH + K G +  A+    +  ++        N V + A+I   C  G +  A 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERG----LQMNEVTFTALIDGFCKKGFLDDAL 385

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
                M+   ++P    Y  ++ G     RM +   LL +M   G+ PD V    ++  Y
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445

Query: 554 QENGDLKSAFRCSEFLKE 571
            +N D  SAF  ++ + E
Sbjct: 446 CKNCDTHSAFELNQQMLE 463



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 5/254 (1%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G + +V+ YN+++     +  +  A      M   GV PNV T++ L+   C  G+   A
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + +  +M      P+VV +  L+    + G +    RL   M E  + P++ T +S+++G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           + K G++ +A   F E   +      +P+ V Y  ++   C  G   +A  +F++M    
Sbjct: 270 MCKAGKMEDARKVFDEMVREG----LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + PD  T+T+++  + +A  +   + L+  M + G+  + V    ++ G+ + G L  A 
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385

Query: 564 RCSEFLKESRIGSS 577
                +K+ RI  S
Sbjct: 386 LAVRGMKQCRIKPS 399



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 5/220 (2%)

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+V+ +++++     A ++ +A   +  M+   + P+V  +  L+  L   G+ KE 
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L + ++M  A   P+V T ++L+   F+ G +  A        +    G   PN V + +
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMRE----GGLKPNLVTFNS 265

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  +C  G++  A K+F +M  + L PD  +Y T++ G  +A    + + + A+M + G
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           I+PD V    ++    + G+L+ A      ++E  +  +E
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE 365


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/530 (30%), Positives = 264/530 (49%), Gaps = 8/530 (1%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           Y++F  +    IP  N   ++T+I    +   ++ A  V++++    V P     N L++
Sbjct: 181 YNLFLEMMDQGIPP-NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIH 239

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G +  GK+  V +  EEM   GL  D +TY +L+D  C  G   +A   FD M  KGI+P
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V IY IL+HG   +  + E  S    M   GV PN   +N +   Y K A +  A+  +
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           ++M    L P+VV+FG L+D LCK+G +  A   F  M   GV PNIFV++ L+ G C  
Sbjct: 360 NKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTV 419

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G   +A  L  E+    I  D   +N L+  LC  G++  A+ L+  M + G+  NV++Y
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+L+ G+C  G +++A  +   M   G++PN  T++ L+ G CKA  +D A  L+ EM++
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + P V  +  ++ GL + G   E   LY  M+ ++    ++T + +++GL KN  +  
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A   F     K        + V +  +I AL   G+   A  LF+ + +  L PD  TY 
Sbjct: 600 AFKMFRRLCSKDP----QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYR 655

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +   L+    + +   L + M K G  P++ +   +VR     GD+  A
Sbjct: 656 LIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 171/583 (29%), Positives = 266/583 (45%), Gaps = 78/583 (13%)

Query: 51  NPSVFSTLIIAFSEMGHIEE---ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-F 106
           N   +S LI  F  MG +E    A  +  K      +   + LL GL    + D   +  
Sbjct: 89  NACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL 148

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   G   DVV Y  +I+    +G V KA NLF EM+D+GI P VV YT +I GLC 
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A+ +F+ M + GV P+  TYN L+ GY         ++   EM  H L+P+ +T
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF---------- 276
           + +L+D LCK G  R A  FF  M + G+ P++ +Y  L+ G+   G L           
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328

Query: 277 -------------------------EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                                    EAM + ++M +  +SPDV ++  LI  LC +G+++
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA----------------------- 348
            A     +M  EG+  N+  ++SL+ G C  G  EKA                       
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLM 448

Query: 349 LSVCSQ------------MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            ++C++            M   GV PNV+++++L+ G C  G ID A  L   MV   L 
Sbjct: 449 CNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK 508

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+   +T L+ G  K   + +   L++EML   +TP V T ++++HGLF+ GR S A   
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           +L   +         +   Y  I+  LC +  + +A K+F  + S + + D+ T+  M+ 
Sbjct: 569 YLNMINSR----TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            LL+  R  D M L A +   G+VPD V  +++     E G L
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 219/468 (46%), Gaps = 46/468 (9%)

Query: 137 KALNLFDEMIDKGIEPTVVIY----TILIHGLCNENKMVEAESMFRSMRECG--VVPNLY 190
           +AL LFDE++      +V  +    T++    C+           R  REC   V PN  
Sbjct: 32  EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN-FFVH 249
           TY+ L+  +C++  +      +  +L    + NV+    L+ GLC    +  A +   + 
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M++FG  P++  YN +I+G  + G + +A +L  EM    I P+V TY  +I GLC    
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A+G+ Q+M   G+  +  TYN LI GY   G  ++ + +  +M+  G+EP+ +T++ 
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM-------------- 415
           L+D  CK G    A   +  M  K + PDV ++  L+ G +  G +              
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 416 ---------------------KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
                                +E + ++ +M +  ++P V +  +LI  L K GR+ +A+
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F +  ++      +PN  ++++++  LC  G+  KA +LF ++    +  D   + T+
Sbjct: 392 LQFNQMINEG----VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  L    R+++   L+  MI++G+ P+ +    +V G+   G +  A
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 204/402 (50%), Gaps = 6/402 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +F+ +  A+++   IEEA+ ++ K+    + P + +  AL++ L K G+ D     +
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G+  ++  +  L+   C  G   KA  LF E++D+GI    V +  L+  LCNE
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +++EA+ +   M   GV PN+ +YN L+ G+C    ++ A +    M+ + L+PN  T+
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTY 514

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+ G CK   +  A + F  M   GV P +  YN ++ G  + G   EA  L   M  
Sbjct: 515 TILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMIN 574

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                D++TYNI++ GLC    ++ A  + +++  +    + VT+N +I    K G  E 
Sbjct: 575 SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKED 634

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + + ++  G+ P+VVT+  + +   + G++    GL++ M      P+  +  AL+ 
Sbjct: 635 AMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVR 694

Query: 408 GLSKDGNM-KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            L   G++ +  + LYK  L+ K      + +S++  L+  G
Sbjct: 695 RLLHRGDISRAGVYLYK--LDEKNFSLEASTTSMLISLYSRG 734



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 9/222 (4%)

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA---MGLYTEMVIK---SLVPD 398
           +++AL +  ++       +V  F+ L+    +AG   A+   + L+T M  +    + P+
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              ++ LI    + G ++     +  +L+     +V  +S L+ GL    R+  A +  L
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            +  +     C P+ V Y  +I     +GQ+ KA  LF +M    + P+  TYTT++ GL
Sbjct: 150 LRMSEFG---CPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            +A+ +     +   MI  G+ PD      ++ GY   G  K
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWK 248


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 169/509 (33%), Positives = 257/509 (50%), Gaps = 19/509 (3%)

Query: 62  FSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           F  +GH+  +  ++ KI      L  + A N +L GL   G      EF++E+V  G   
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTV-ALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG---------IEPTVVIYTILIHGLCNEN 168
           + V+YG+LI+  C  G V +A+NL   MI+K          ++  VV+Y+I+I  LC   
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + E    +  M   GV PN +TY +L+ G C V           EM+   L  +V  F 
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           VL+DGLCK G L  A   F  M   G  PNI     L+ G+C  GN+  A  L   + ++
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
               DV+TYN+ I G C VG++  A  +  +M +EG++ N+VTYNSLID  CK G++  A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M   G+ P++VT   L+DG CK+  +D A+ L+ ++V   L PDV  +T LI G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
                 M E + L ++M    + P + T S LI GL ++GRISNA     E   K     
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGP--- 496

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ + Y+ ++ AL     + +A  LF+ M    L PD   YT M+ G  +++R+ + +
Sbjct: 497 -LPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAI 555

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENG 557
            L  +M    +VPD V   ++     ++G
Sbjct: 556 NLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 241/477 (50%), Gaps = 15/477 (3%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE-----------VLPAIQACNALLNGLIKKG 98
            N   +  LI    E G + EA+ + R IE           V   +   + +++ L + G
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
             D  +EFY EM+  G+  +  TYG LI   CG G  ++   L DEMI +G++ +V ++T
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +LI GLC    +VEA  MF  M   G  PN+ T  ALM GYC   +V+ A E +  +   
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             + +V T+ V + G CKVG +R A   F  M + GV PNI  YN LID  CKAG +  A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   M +  ++PD+ T  IL+ GLC   +L+ A  L  ++ + G+  +V +Y  LI G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C    M +A+++   M  K + P++VT+S LIDG C++G I  A  L  EM +K  +PD
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + ++ L+D L K  ++ E + L+ +M++  + P V   + +I G  K+ RI  A+N F 
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           E   K       P+ V Y  +  A+   G      K  + +R  N  P    Y   L
Sbjct: 560 EMHMKN----LVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAAL 612



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 236/457 (51%), Gaps = 12/457 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   D V    ++   C  G V+KAL   DE+++ G     V Y ILI+GLC   ++ EA
Sbjct: 102 GYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEA 161

Query: 174 ESMFRSMRECG--------VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            ++ R + +          V  N+  Y+ ++D  C+   V+   EFY+EM+ + + PN  
Sbjct: 162 VNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEF 221

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G L+ GLC VG+          M + G+  +++V+  LIDG CK G L EA  +  EM
Sbjct: 222 TYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEM 281

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                 P++ T   L+ G C  G ++ A  L   + + G   +V TYN  I GYCK G +
Sbjct: 282 VNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRV 341

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A+ V  +M  +GV PN+VT++SLID  CKAG +  A  +   M    L PD+V    L
Sbjct: 342 RDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCIL 401

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DGL K   + + + L+ +++E+ +TP V++ + LIHG   + R+  A+N   +   K  
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN- 460

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P+ V Y+ +I  LC  G+I  A +L ++M      PD  TY+ +L  L + + + 
Sbjct: 461 ---LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLD 517

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + + L   MIK G+ PD +   +M+ GY ++  +  A
Sbjct: 518 EAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEA 554



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 207/398 (52%), Gaps = 12/398 (3%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           S+F  + + G   +    N ++ G C    V +ALEF+ E++++    N V++G+L++GL
Sbjct: 93  SIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGL 152

Query: 235 CKVGELRAAGNFFVHMAK--------FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           C+ G +  A N    + K        F V  N+ +Y+ +ID  C+ G + E     +EM 
Sbjct: 153 CENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P+ FTY  LI+GLCGVG+     GL+ +M + G+  +V  +  LIDG CK G + 
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M  +G EPN+VT ++L+ G C  GN+D A  L+  +       DV  +   I
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G +++ +R++ EM    + P++ T +SLI  L K G +S A    + KT    G
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE--IVKTMHRSG 390

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              +P+ V    ++  LC   ++ +A  LF+ +    L PD  +YT ++ G   ++RM +
Sbjct: 391 --LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGE 448

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            M LL DM    +VP  V    ++ G   +G + +A+R
Sbjct: 449 AMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 12/344 (3%)

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           +G +  + + F  + K G   +    N ++ G C  G + +A+    E+     S +  +
Sbjct: 85  LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEG--------ILANVVTYNSLIDGYCKEGDMEKA 348
           Y ILI GLC  G++  A  LL+ + KE         +  NVV Y+ +ID  C+ G +++ 
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
               ++M   GV PN  T+ SLI G C  G      GL  EM+ + L   V VFT LIDG
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K+G + E   ++ EM+     P++ T ++L+ G    G +  A   F    D      
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELF----DAIGEWG 320

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              +   Y   I   C  G++  A ++F +M  + + P+  TY +++  L +A  +    
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            ++  M + G+ PD V   +++ G  ++  L  A      L ES
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 269/535 (50%), Gaps = 20/535 (3%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNA 89
           H+   +  AL     P      + T++      GH  +A  ++ ++    V P + A N 
Sbjct: 140 HIALRLLRAL-----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 194

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L+ L K+G          +++  G+  ++ TY + I   C  G + +A+ L D M    
Sbjct: 195 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 254

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P VV Y  LI GLC ++   EA    R M   G +P+ +TYN ++DGYCK++ V  A 
Sbjct: 255 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 313

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   + +     P+ VT+  L++GLC  G++  A   F      G+ P+I VYN L+ G 
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 373

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G +  A+ + +EM +    PD+ TYNI+I GLC +G +  A  ++     +G L +V
Sbjct: 374 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 433

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            T+N+LIDGYCK   ++ AL +  +M E G+ P+ +T++S+++G CKAG ++     + E
Sbjct: 434 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M++K   P+ + +  LI+   +   M+E  ++  +M +  + P   + ++LI+G  +NG 
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 553

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A   F +  +K   GY S     +  +I A      +  A K+F +M S   R D+ 
Sbjct: 554 LEGAYLLFQKLEEK---GY-SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 609

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-----AVINQVMV--RGYQENG 557
           TY  ++ G  +   +    M L +MIK G +P       VIN + V  R +Q  G
Sbjct: 610 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 664



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 259/530 (48%), Gaps = 16/530 (3%)

Query: 49  KFNPSVFSTL----IIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFD 101
           + +P+    L    I A++  G + +A+  + ++++    PA  A NA+++ L+     D
Sbjct: 46  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 105

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y  M+  G+  D+ T+ + +   C       AL L   +  +G     V Y  ++
Sbjct: 106 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 161

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GL       +A  +F  M    V PNL  +N ++   CK  DV  A     +++   + 
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N+ T+ + + GLC+ G L  A      M  + V P++  YN LI G CK     EAM  
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 280

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M      PD FTYN +I G C +  ++ A  LL+    +G + + VTY SLI+G C 
Sbjct: 281 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 340

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EGD+E+AL + ++   KG++P++V ++SL+ G C  G I  A+ +  EM  +   PD+  
Sbjct: 341 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 400

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +I+GL K GN+ +   +  + +     P VFT ++LI G  K  ++ +AL       
Sbjct: 401 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 460

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           +       +P+ + Y +++  LC  G++ + ++ F +M      P+  TY  ++    R+
Sbjct: 461 EYG----IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +M +   ++  M + G+ PDAV    ++ G+  NGDL+ A+   + L+E
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 566



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 218/443 (49%), Gaps = 19/443 (4%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR----KIEV 80
           L K   P    + +   +N   +P  +   ++T+I  + ++  ++EA  + +    K  V
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLP--DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 325

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
              +  C +L+NGL  +G  +   E + E    G+  D+V Y  L+   C QG ++ AL 
Sbjct: 326 PDQVTYC-SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + +EM ++G  P +  Y I+I+GLC    + +A  +       G +P+++T+N L+DGYC
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   ++ AL+    M  + + P+ +T+  +++GLCK G++      F  M   G  PN  
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LI+  C++  + EA  +  +M +  + PD  ++N LI G C  G LEGA  L QK+
Sbjct: 505 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 564

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            ++G  A   T+N+LI  +  + +M  A  +  +M  KG   +  T+  LIDG CK  N+
Sbjct: 565 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 624

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV--- 437
           D A     EM+ K  +P +  F  +I+ L+ +  + + + +   M++  + P V      
Sbjct: 625 DRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILN 684

Query: 438 ---------SSLIHGLFKNGRIS 451
                      L+  L K G IS
Sbjct: 685 ADKKEIAAPKILVEDLMKKGHIS 707


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 269/535 (50%), Gaps = 20/535 (3%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNA 89
           H+   +  AL     P      + T++      GH  +A  ++ ++    V P + A N 
Sbjct: 137 HIALRLLRAL-----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 191

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L+ L K+G          +++  G+  ++ TY + I   C  G + +A+ L D M    
Sbjct: 192 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 251

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P VV Y  LI GLC ++   EA    R M   G +P+ +TYN ++DGYCK++ V  A 
Sbjct: 252 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   + +     P+ VT+  L++GLC  G++  A   F      G+ P+I VYN L+ G 
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G +  A+ + +EM +    PD+ TYNI+I GLC +G +  A  ++     +G L +V
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            T+N+LIDGYCK   ++ AL +  +M E G+ P+ +T++S+++G CKAG ++     + E
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M++K   P+ + +  LI+   +   M+E  ++  +M +  + P   + ++LI+G  +NG 
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A   F +  +K   GY S     +  +I A      +  A K+F +M S   R D+ 
Sbjct: 551 LEGAYLLFQKLEEK---GY-SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 606

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-----AVINQVMV--RGYQENG 557
           TY  ++ G  +   +    M L +MIK G +P       VIN + V  R +Q  G
Sbjct: 607 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 661



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 260/530 (49%), Gaps = 16/530 (3%)

Query: 49  KFNPSVFSTL----IIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFD 101
           + +P+    L    I A++  G + +A+  + ++++    PA  A NA+++ L+     D
Sbjct: 43  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 102

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y  M+  G+  D+ T+ + +   C       AL L   +  +G     V Y  ++
Sbjct: 103 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 158

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GL       +A  +F  M    V PNL  +N ++   CK  DV  A     +++   + 
Sbjct: 159 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 218

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N+ T+ + + GLC+ G L  A      M  + V P++  YN LI G CK     EAM  
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 277

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M      PD FTYN +I G C +  ++ A  LL+    +G + + VTY SLI+G C 
Sbjct: 278 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 337

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EGD+E+AL + ++   KG++P++V ++SL+ G C  G I  A+ +  EM  +   PD+  
Sbjct: 338 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 397

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +I+GL K GN+ +   +  + +     P VFT ++LI G  K  ++ +AL       
Sbjct: 398 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL----V 453

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++      +P+ + Y +++  LC  G++ + ++ F +M      P+  TY  ++    R+
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +M +   ++  M + G+ PDAV    ++ G+  NGDL+ A+   + L+E
Sbjct: 514 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 208/414 (50%), Gaps = 17/414 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++T+I  + ++  ++EA  + +    K  V   +  C +L+NGL  +G  +   E + E
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC-SLINGLCAEGDVERALELFNE 350

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
               G+  D+V Y  L+   C QG ++ AL + +EM ++G  P +  Y I+I+GLC    
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 410

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +       G +P+++T+N L+DGYCK   ++ AL+    M  + + P+ +T+  
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GLCK G++      F  M   G  PN   YN LI+  C++  + EA  +  +M +  
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD  ++N LI G C  G LEGA  L QK+ ++G  A   T+N+LI  +  + +M  A 
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  KG   +  T+  LIDG CK  N+D A     EM+ K  +P +  F  +I+ L
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTV------------SSLIHGLFKNGRIS 451
           + +  + + + +   M++  + P V                 L+  L K G IS
Sbjct: 651 TVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 704


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 257/507 (50%), Gaps = 36/507 (7%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++TL+ A++ +G I++A  V   +      P +   N L  GL + GK D  ++  +E
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340

Query: 110 MVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           M    +V+ DVVTY  L+D C        ALNL +EM DKG++ ++V + I++ GLC E 
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EA    + M E G+ P++ TYN L+D YCK  +V +A     EM+   L+ +  T  
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLN 460

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+  LCK      A        + G  P+   Y  ++  + K      A+ L  EM K 
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR 520

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +++P ++TYN LIKGLC +G+L  A   L ++ K+G++ +  TYN +I  YCKEGD+EKA
Sbjct: 521 KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKA 580

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
               ++M E   +P+VVT ++L++G C  G ++ A+ L+     K    DV+ +  LI  
Sbjct: 581 FQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFT----------------VSSLIHGLFKNGRISN 452
           L KDG++   L  + +M    + P  FT                  +++H L ++G++S 
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700

Query: 453 ALNFFLEKTD------------KTD----GGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             ++ L K+             K+D    G     +   Y   ++ LC  GQ+ +A  + 
Sbjct: 701 RFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVL 760

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            +M    +  D+ TY T++ GL++ ++
Sbjct: 761 DEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 246/521 (47%), Gaps = 49/521 (9%)

Query: 60  IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           +A S     + +L V+R +  L   P     N L++    KG           M   GL 
Sbjct: 183 LARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLS 242

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            DVVTY  L+   C +G + +A  L   M  +GI PT   Y  L+        + +A ++
Sbjct: 243 PDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNV 302

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL-QPNVVTFGVLMD--- 232
             +M   G  P+L+TYN L  G C+   V+ A +   EM H ++  P+VVT+  L+D   
Sbjct: 303 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACF 362

Query: 233 --------------------------------GLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                                           GLC+ G+L  A      M + G+ P++ 
Sbjct: 363 KYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVI 422

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LID +CKA N+ +A  L  EM +  +  D FT N L+  LC   + E AE LL+  
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G + + V+Y +++  Y KE   E AL +  +M+++ + P++ T+++LI G C  G +
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+    E++ K LVPD   +  +I    K+G++++  + + +MLE    P V T ++L
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602

Query: 441 IHGLFKNGRISNALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++GL  +G++  A+  F    EK  K D        + Y  +IQALC DG +  A   F+
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDV-------ITYNTLIQALCKDGDVDTALHFFA 655

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           DM +  L+PD  TY  +L  L  A R  +   +L  + + G
Sbjct: 656 DMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 246/548 (44%), Gaps = 85/548 (15%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           P + + L+ +F   GH+             P++QA NA+L+ L +               
Sbjct: 153 PHLAAQLLHSFRRRGHVR------------PSLQAANAVLSALARSPSTSP--------- 191

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
                                     +L++F  +I   + P    + +L+H  C++  + 
Sbjct: 192 ------------------------QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLA 227

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S   +M+  G+ P++ TYN L+  +C+   +  A      M    + P   T+  L+
Sbjct: 228 DALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLV 287

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI- 290
               ++G ++ A N    M  FG  P+++ YN L  G C+AG + EA  L  EME   I 
Sbjct: 288 SAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV TYN L+       +   A  LL++M  +G+ +++VT+N ++ G C+EG +E+AL 
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL--------------- 395
               MTE+G+ P+V+T+++LID  CKA N+  A  L  EMV   L               
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467

Query: 396 --------------------VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                               VPD V +  ++    K+   +  L L+ EM + K+TPS++
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIY 527

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI GL   G+++ A++   E   K       P+   Y  II A C +G + KA + 
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKG----LVPDDTTYNIIIHAYCKEGDLEKAFQF 583

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            + M  +  +PD  T  T++ GL    ++   + L     + G   D +    +++   +
Sbjct: 584 HNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCK 643

Query: 556 NGDLKSAF 563
           +GD+ +A 
Sbjct: 644 DGDVDTAL 651



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESM--FRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           + P++     ++  L          S+  FRS+    + PN YT+N L+  +C    +  
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL     M    L P+VVT+  L+   C+ G L  A      M K G+ P    YN L+ 
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVS 288

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            + + G + +A ++   M  F   PD++TYN+L  GLC  G+++ A  L  +M    I++
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS 348

Query: 328 -NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VVTYN+L+D   K      AL++  +M +KGV+ ++VT + ++ G C+ G ++ A+G 
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              M  + L PDV+ +  LID   K  N+ +   L  EM+ + +    FT+++L++ L K
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             R   A         +   G+  P+ V Y  ++ A   + +   A  L+ +M    L P
Sbjct: 469 EKRYEEAEELLRSPPQR---GFV-PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              TY T+++GL    ++ + +  L +++K G+VPD     +++  Y + GDL+ AF+
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 178/357 (49%), Gaps = 8/357 (2%)

Query: 219 NLQPNVVTFGVLMDGLCKVGEL--RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           +++P++     ++  L +      +A+ + F  +    + PN + +N L+  HC  G L 
Sbjct: 168 HVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLA 227

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+S  S M+ F +SPDV TYN L+K  C  G L  A  LL +M KEGI     TYN+L+
Sbjct: 228 DALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLV 287

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             Y + G +++A +V   MT  G EP++ T++ L  G C+AG +D A  L  EM   S+V
Sbjct: 288 SAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDVV +  L+D   K     + L L +EM +  +  S+ T + ++ GL + G++  AL 
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                T++      +P+ + Y  +I A C    + KA  L  +M    L+ D  T  T+L
Sbjct: 408 RLKMMTEEG----LAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAV-INQVMVRGYQENGDLKSAFRCSEFLKE 571
             L + KR  +   LL    + G VPD V    VM   ++EN    + +   E  K 
Sbjct: 464 YNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR 520



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 86/190 (45%), Gaps = 6/190 (3%)

Query: 397 PDVVVFTALIDGLSKDGNM--KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           P +    A++  L++  +   + +L +++ ++  ++ P+ +T + L+H     G +++AL
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +          G   SP+ V Y  +++A C  G + +A  L + M+ + + P   TY T+
Sbjct: 231 STL----STMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTL 286

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +    R   +     ++  M   G  PD     V+  G  + G +  AF+  + ++   I
Sbjct: 287 VSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI 346

Query: 575 GSSETEGHTT 584
            S +   + T
Sbjct: 347 VSPDVVTYNT 356


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 261/515 (50%), Gaps = 21/515 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  + + G +E A  ++ ++++   LP ++   A++NG  KKG F ++     EM 
Sbjct: 242 YNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  +V  Y  +ID     G ++KA+   + MI+ G +P +V Y  LI G C + K+ 
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +       G++PN ++Y  L+  YCK    +RA  +  EM     +P++VT+G L+
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL   GE+  A      M + GVFP+  +YN L+ G CK   L  A  L +EM    + 
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 481

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F Y  L+ G    G L+ A  L +   ++G+   +V YN++I GYCK G M+ A++ 
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 541

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            ++M ++ + P+  T+S++IDG  K  ++D A  ++ EMV     P+VV +T+LI+G  +
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCR 601

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G++  +L++++EM    + P+V T S LI    K  ++ +A +FF E         C P
Sbjct: 602 KGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNK----CVP 657

Query: 472 NHVLYAAIIQALCYDGQILKASK--------------LFSDMRSDNLRPDNCTYTTMLRG 517
           N V +  ++     +G    + K               F  M SD   P +  Y ++L  
Sbjct: 658 NDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILIC 717

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           L +       + L   M   G +PD+V    ++ G
Sbjct: 718 LCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHG 752



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 262/533 (49%), Gaps = 49/533 (9%)

Query: 42  LNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLI 95
           L ++ + + +P+    S +I A+S+ G +E+AL +Y    +     P + ACN+LLN L+
Sbjct: 117 LENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLV 176

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM--IDKGIEPT 153
           K G+ +                                    A  L+DEM  ID   +  
Sbjct: 177 KLGRIEI-----------------------------------ARKLYDEMLEIDGAGDRC 201

Query: 154 VVIYT--ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           V  Y+  I++ GLC E K+ E   +       G +PN+  YN L+DGYCK  D+  A   
Sbjct: 202 VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGL 261

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + E+      P V T+G +++G CK G+ +A     + M   G+  N+ VYN +ID   K
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G++ +A+     M +    PD+ TYN LI G C  G++  A+ LL++   +G++ N  +
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y  LI  YCK+G  ++A +   +MTE+G +P++VT+ +L+ G   AG +D A+ +  +M+
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + PD  ++  L+ GL K   +     L  EML+  + P  F  ++L+ G  +NG + 
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   F    +K      +P  V Y A+I+  C  G +  A    + M+  +L PD  TY
Sbjct: 502 EARKLFELTIEKG----MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +T++ G ++   +     +  +M+KM   P+ V    ++ G+   GDL  + +
Sbjct: 558 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 201/437 (45%), Gaps = 15/437 (3%)

Query: 150 IEPTVVIYTILIHGLCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           + PT    +I+I    +   + +A E  +  ++     P++   N+L++   K+  +  A
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 209 LEFYHEMLHHNLQPNVV----TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            + Y EML  +   +      +  +++ GLCK G+L             G  PNI  YN 
Sbjct: 185 RKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNT 244

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG+CK G++  A  L  E++     P V TY  +I G C  G  +  + LL +M   G
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  NV  YN++ID   K G + KA+     M E G +P++VT+++LI G C+ G +  A 
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  + + K L+P+   +T LI    K G          EM E    P + T  +L+HGL
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424

Query: 445 FKNGRISNALNF---FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
              G +  AL      LE+    D G       +Y  ++  LC   ++  A  L ++M  
Sbjct: 425 VVAGEVDVALTIREKMLERGVFPDAG-------IYNILMSGLCKKFKLPAAKLLLAEMLD 477

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            ++ PD   Y T++ G +R   + +   L    I+ G+ P  V    M++GY + G +K 
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537

Query: 562 AFRCSEFLKESRIGSSE 578
           A  C   +K+  +   E
Sbjct: 538 AMACINRMKKRHLAPDE 554



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 9/420 (2%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ L+  L       E E +  +MR   + P     + ++  Y     V +ALE Y+ +L
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 217 H-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN----CLIDGHCK 271
             +   P+V+    L++ L K+G +  A   +  M +     +  V N     ++ G CK
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L E   L  +       P++  YN LI G C  G +E A GL  ++  +G L  V T
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y ++I+G+CK+GD +    +  +M  +G+  NV  ++++ID + K G+I  A+     M+
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                PD+V +  LI G  +DG + E  +L ++ L   + P+ F+ + LIH   K G   
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A N+ +E T++       P+ V Y A++  L   G++  A  +   M    + PD   Y
Sbjct: 397 RASNWLIEMTERGH----KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             ++ GL +  ++    +LLA+M+   ++PDA +   +V G+  NG+L  A +  E   E
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 17/342 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  L+      G ++ AL +  K+    V P     N L++GL KK K  +      EM
Sbjct: 416 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 475

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   ++ D   Y  L+D     G++ +A  LF+  I+KG+ P +V Y  +I G C    M
Sbjct: 476 LDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMM 535

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A +    M++  + P+ +TY+ ++DGY K  D++ A + + EM+    +PNVVT+  L
Sbjct: 536 KDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G C+ G+L  +   F  M   G+ PN+  Y+ LI   CK   L +A S   EM   + 
Sbjct: 596 INGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKC 655

Query: 291 SPDVFTYNILIKGLCGVGQLEGAE--------------GLLQKMYKEGILANVVTYNSLI 336
            P+  T+N L+ G    G    +E                  +M  +G       YNS++
Sbjct: 656 VPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSIL 715

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
              C+ G    AL + ++MT KG  P+ V+F +L+ G C  G
Sbjct: 716 ICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEG 757



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 152/322 (47%), Gaps = 19/322 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR-KIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TL+  F   G+++EA  ++   IE  + P I   NA++ G  K G           M
Sbjct: 486 VYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRM 545

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  D  TY  +ID    Q D+  A  +F EM+    +P VV YT LI+G C +  +
Sbjct: 546 KKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDL 605

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             +  +FR M+ CG+VPN+ TY+ L+  +CK A +  A  F+ EML +   PN VTF  L
Sbjct: 606 HRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYL 665

Query: 231 MDGLCKVGELRAAG---------------NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           ++G  K G  RA                 NFF  M   G  P    YN ++   C+ G  
Sbjct: 666 VNGFSKNGT-RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMF 724

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A+ L ++M      PD  ++  L+ G+C  G+ +  + ++     E  L   V Y+S+
Sbjct: 725 RTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSI 784

Query: 336 IDGYCKEGDMEKALSVCSQMTE 357
           +D Y  +G  E ++ + +   E
Sbjct: 785 LDQYLPQGTSEASVILQTMFEE 806



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 9/273 (3%)

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           F Y+ L+K L         E +L+ M  E +       + +I  Y   G +EKAL +   
Sbjct: 95  FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYF 154

Query: 355 MTEKGVE-PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV----FTALIDGL 409
           + +     P+V+  +SL++   K G I+ A  LY EM+      D  V       ++ GL
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGL 214

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G ++E  +L ++       P++   ++LI G  K G +  A   F+E   K   G+ 
Sbjct: 215 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK---GFL 271

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P    Y AII   C  G      +L  +M S  L  +   Y T++    +   ++  + 
Sbjct: 272 -PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 330

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  MI+ G  PD V    ++ G   +G +  A
Sbjct: 331 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 269/535 (50%), Gaps = 20/535 (3%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNA 89
           H+   +  AL     P      + T++      GH  +A  ++ ++    V P + A N 
Sbjct: 138 HIALRLLRAL-----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 192

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L+ L K+G          +++  G+  ++ TY + I   C  G + +A+ L D M    
Sbjct: 193 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 252

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P VV Y  LI GLC ++   EA    R M   G +P+ +TYN ++DGYCK++ V  A 
Sbjct: 253 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   + +     P+ VT+  L++GLC  G++  A   F      G+ P+I VYN L+ G 
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G +  A+ + +EM +    PD+ TYNI+I GLC +G +  A  ++     +G L +V
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            T+N+LIDGYCK   ++ AL +  +M E G+ P+ +T++S+++G CKAG ++     + E
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M++K   P+ + +  LI+   +   M+E  ++  +M +  + P   + ++LI+G  +NG 
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A   F +  +K   GY S     +  +I A      +  A K+F +M S   R D+ 
Sbjct: 552 LEGAYLLFQKLEEK---GY-SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 607

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-----AVINQVMV--RGYQENG 557
           TY  ++ G  +   +    M L +MIK G +P       VIN + V  R +Q  G
Sbjct: 608 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 662



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 260/530 (49%), Gaps = 16/530 (3%)

Query: 49  KFNPSVFSTL----IIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFD 101
           + +P+    L    I A++  G + +A+  + ++++    PA  A NA+++ L+     D
Sbjct: 44  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 103

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y  M+  G+  D+ T+ + +   C       AL L   +  +G     V Y  ++
Sbjct: 104 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 159

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GL       +A  +F  M    V PNL  +N ++   CK  DV  A     +++   + 
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N+ T+ + + GLC+ G L  A      M  + V P++  YN LI G CK     EAM  
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 278

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M      PD FTYN +I G C +  ++ A  LL+    +G + + VTY SLI+G C 
Sbjct: 279 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 338

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EGD+E+AL + ++   KG++P++V ++SL+ G C  G I  A+ +  EM  +   PD+  
Sbjct: 339 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 398

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +I+GL K GN+ +   +  + +     P VFT ++LI G  K  ++ +AL       
Sbjct: 399 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL----V 454

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++      +P+ + Y +++  LC  G++ + ++ F +M      P+  TY  ++    R+
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +M +   ++  M + G+ PDAV    ++ G+  NGDL+ A+   + L+E
Sbjct: 515 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 208/414 (50%), Gaps = 17/414 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++T+I  + ++  ++EA  + +    K  V   +  C +L+NGL  +G  +   E + E
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC-SLINGLCAEGDVERALELFNE 351

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
               G+  D+V Y  L+   C QG ++ AL + +EM ++G  P +  Y I+I+GLC    
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 411

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +       G +P+++T+N L+DGYCK   ++ AL+    M  + + P+ +T+  
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GLCK G++      F  M   G  PN   YN LI+  C++  + EA  +  +M +  
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD  ++N LI G C  G LEGA  L QK+ ++G  A   T+N+LI  +  + +M  A 
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  KG   +  T+  LIDG CK  N+D A     EM+ K  +P +  F  +I+ L
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTV------------SSLIHGLFKNGRIS 451
           + +  + + + +   M++  + P V                 L+  L K G IS
Sbjct: 652 TVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 705


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/549 (31%), Positives = 269/549 (48%), Gaps = 71/549 (12%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSL-EIPKFNPSVFSTLI 59
           + ++LANAK Y   R L+    +N       H+   ++F++L+ L      N  +   L+
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKN------AHYSNSTIFHSLSVLGSWGCANSIIVDMLV 166

Query: 60  IAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
            A+ + G ++ AL  + +       L A+ +CN +L  L+K+G+              G+
Sbjct: 167 WAYVKNGEMDLALEGFDRAGDYGFRLSAL-SCNPMLVSLVKEGRI-------------GV 212

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V  V                      + EMI + I   VV + ++I+GLC   K  +A  
Sbjct: 213 VESV----------------------YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   M+  G  P++ TYN ++DGYCK   + +A     EM+   + PN +TF +L+DG C
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +   + AA   F  M + G+ PN+  YN LI+G C  G L EA+ L  +M    + P+V 
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN LI G C    L+ A  +L  + K G+  NV+T+N+LID Y K G M+ A  + S M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + GV PNV T++ LI G C+ GN+  A  L  EM    L  D+V +  L+D L K G  
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF--FLEKTDKTDGGYCSPNH 473
           ++ +RL  EM E  + PS  T ++LI G F+ G  + ALN    +EK  +        N 
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR------RANI 544

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  +I+  C  G++ +A++L ++M    L P+  TY                 +L  +
Sbjct: 545 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD----------------ILRDE 588

Query: 534 MIKMGIVPD 542
           M++ G +PD
Sbjct: 589 MMEKGFIPD 597



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 219/426 (51%), Gaps = 5/426 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +I  +L+       +M  A   F    + G   +  + N ++    K   +      Y E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+   +  NVVTF V+++GLCKVG+ + AG+    M  +G  P++  YN +IDG+CKAG 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +F+A +L  EM    I P+  T+NILI G C    +  A+ + ++M ++G+  NVVTYNS
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+G C  G +++AL +  +M+  G++PNVVT+++LI+G CK   +  A  +  ++  + 
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L P+V+ F  LID   K G M +   L   ML+  + P+V T + LI G  + G +  A 
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
               E     +G     + V Y  ++ ALC  G+  KA +L  +M    L P + TY  +
Sbjct: 460 KLAKE----MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNAL 515

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKESR 573
           + G  R       + +   M K G   + V   V+++G+   G L+ A R  +E L++  
Sbjct: 516 IDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575

Query: 574 IGSSET 579
           I +  T
Sbjct: 576 IPNRTT 581



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 258/520 (49%), Gaps = 22/520 (4%)

Query: 50  FNPSVFSTLIIAF-----SEMGHIEEALWVYRKIEVLPAIQACN---ALLNGLIKKGKFD 101
           FN      LI+ +      E G I       R + +L   +  N   ALL+   K   + 
Sbjct: 81  FNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYS 140

Query: 102 SVWEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           +   F+   VL     A+ +   +L+      G++  AL  FD   D G   + +    +
Sbjct: 141 NSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPM 200

Query: 161 IHGLCNENKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +  L  E ++   ES+++ M  R  GV  N+ T++ +++G CKV    +A +   +M   
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              P+V+T+  ++DG CK G++  A      M    + PN   +N LIDG C+  N+  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +  EM++  + P+V TYN LI GLC  G+L+ A GL  KM   G+  NVVTYN+LI+G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +CK+  +++A  +   + ++G+ PNV+TF++LID   KAG +D A  L + M+   + P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  +  LI G  ++GN+KE  +L KEM    +   + T + L+  L K G    A+    
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E  +       +P+H+ Y A+I     +G    A  + + M     R +  TY  +++G 
Sbjct: 499 EMFEVG----LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554

Query: 519 LRAKRMLDVMMLLADMIKMGIVP-----DAVINQVMVRGY 553
               ++ +   LL +M++ G++P     D + +++M +G+
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGF 594



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI      G ++EAL +  K+  +   P +   NAL+NG  KK       E  
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +++   GL  +V+T+  LID     G +  A  L   M+D G+ P V  Y  LI G C E
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  + + M   G+  +L TYN L+D  CK  +  +A+    EM    L P+ +T+
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  + G   AA N    M K G   NI  YN LI G C  G L EA  L +EM +
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
             + P+  TY+IL   +   G +   +G L
Sbjct: 573 KGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           AN +  + L+  Y K G+M+ AL    +  + G   + ++ + ++    K G I     +
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y EM+ + +  +VV F  +I+GL K G  ++   + ++M     +PSV T +++I G  K
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G++  A     E   K       PN + +  +I   C D  +  A K+F +M+   L+P
Sbjct: 277 AGKMFKADALLKEMVAKR----IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  TY +++ GL    ++ + + L   M  MG+ P+ V    ++ G+ +   LK A
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 254/492 (51%), Gaps = 7/492 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI  F     +  AL V  K+  L   P I   ++LLNG     +        ++M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +     + VT+  LI          +A+ L D M+ +G +P +  Y  +++GLC    + 
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A S+ + M +  +  ++  Y  ++D  C   +VN AL  + EM +  ++PNVVT+  L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LC  G    A      M +  + PN+  ++ LID   K G L EA  L  EM K  I 
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+FTY+ LI G C   +L+ A+ + + M  +    NVVTYN+LI G+CK   +E+ + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M+++G+  N VT+++LI G  +AG+ D A  ++ +MV   + PD++ ++ L+DGL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +++ L +++ + ++K+ P ++T + +I G+ K G++ +  + F   + K       P
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----VKP 533

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N ++Y  +I   C  G   +A  LF +M+ D   P++ TY T++R  LR         L+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593

Query: 532 ADMIKMGIVPDA 543
            +M   G V DA
Sbjct: 594 KEMRSCGFVGDA 605



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 254/477 (53%), Gaps = 4/477 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   N LL+ + K  KFD V    E M    +  D+ +Y +LI+C C +  +  AL 
Sbjct: 77  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M+  G EP +V  + L++G C+  ++ EA ++   M      PN  T+N L+ G  
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A+     M+    QP++ T+G +++GLCK G++  A +    M K  +  ++ 
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y  +ID  C   N+ +A++L +EM+   I P+V TYN LI+ LC  G+   A  LL  M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            +  I  NVVT+++LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C    +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  ++  M+ K   P+VV +  LI G  K   ++E + L++EM +  +  +  T ++L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+ G    A   F  K   +DG    P+ + Y+ ++  LC  G++ KA  +F  ++
Sbjct: 437 IQGLFQAGDCDMAQKIF--KKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              + PD  TY  M+ G+ +A ++ D   L   +   G+ P+ +I   M+ G+   G
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 216/401 (53%), Gaps = 3/401 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI          EA+ +  ++      P +     ++NGL K+G  D      
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M    + ADVV Y  +ID  C   +V  ALNLF EM +KGI P VV Y  LI  LCN 
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  +A  +   M E  + PN+ T++AL+D + K   +  A + Y EM+  ++ P++ T+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C    L  A + F  M     FPN+  YN LI G CKA  + E M L  EM +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  +  TYN LI+GL   G  + A+ + +KM  +G+  +++TY+ L+DG CK G +EK
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL V   + +  +EP++ T++ +I+G CKAG ++    L+  + +K + P+V+++T +I 
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G  + G  +E   L++EM E    P+  T ++LI    ++G
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 240/474 (50%), Gaps = 9/474 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           + P +   S+L+  +     I EA+ +  ++ V+   P     N L++GL    K     
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              + MV  G   D+ TYG +++  C +GD+  AL+L  +M    IE  VVIYT +I  L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           CN   + +A ++F  M   G+ PN+ TYN+L+   C     + A     +M+   + PNV
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+D   K G+L  A   +  M K  + P+IF Y+ LI+G C    L EA  +   
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +  P+V TYN LIKG C   ++E    L ++M + G++ N VTYN+LI G  + GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A  +  +M   GV P+++T+S L+DG CK G ++ A+ ++  +    + PD+  +  
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G+ K G +++   L+  +    + P+V   +++I G  + G    A   F E   K 
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KE 563

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           DG    PN   Y  +I+A   DG    +++L  +MRS     D  T + ++  L
Sbjct: 564 DGTL--PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF EM+     P++V +  L+  +   NK     S+   M+   +  +LY+YN L++
Sbjct: 64  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +P++VT   L++G C    +  A      M      P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           N   +N LI G   H KA    EA++L   M      PD+FTY  ++ GLC  G ++ A 
Sbjct: 184 NTVTFNTLIHGLFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL+KM K  I A+VV Y ++ID  C   ++  AL++ ++M  KG+ PNVVT++SLI   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + P+VV F+ALID   K+G + E  +LY EM++  I P +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT SSLI+G   + R+  A + F     K     C PN V Y  +I+  C   ++ +  +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TY T+++GL +A        +   M+  G+ PD +   +++ G  
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G L+ A    E+L++S++
Sbjct: 477 KYGKLEKALVVFEYLQKSKM 496



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 232/474 (48%), Gaps = 6/474 (1%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D   + + EMV    +  +V +  L+            ++L + M +  I   +  Y 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI+  C  +++  A ++   M + G  P++ T ++L++GYC    ++ A+    +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             QPN VTF  L+ GL    +   A      M   G  P++F Y  +++G CK G++  A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +SL  +MEK +I  DV  Y  +I  LC    +  A  L  +M  +GI  NVVTYNSLI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C  G    A  + S M E+ + PNVVTFS+LID   K G +  A  LY EM+ +S+ PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +++LI+G      + E   +++ M+     P+V T ++LI G  K  R+   +  F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E + +   G    N V Y  +IQ L   G    A K+F  M SD + PD  TY+ +L GL
Sbjct: 420 EMSQRGLVG----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLK 570
            +  ++   +++   + K  + PD     +M+ G  + G ++  +   CS  LK
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           D  + + + L+ EM++++  PS+   + L+  + K     N  +  +   ++      S 
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK----MNKFDLVISLGERMQNLRISY 113

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +   Y  +I   C   Q+  A  +   M      PD  T +++L G    KR+ + + L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
             M  M   P+ V    ++ G
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHG 194


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 253/474 (53%), Gaps = 12/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+ TLI A S++G + E L +  ++ +   +P +   N  ++GL K  +     +  
Sbjct: 269 NAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 328

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+L G   +  TYGVL+   C  G V +A  L +++ +    P VV++  LI+G  + 
Sbjct: 329 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSR 384

Query: 168 NKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ EA++ M  SM   G  P+++TYN L+ G CK   +  A E  +EM     +PNV+T
Sbjct: 385 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+D  CK G L  A N    M+  G+  N   YNCLI   CK   + +A+++  +M 
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+FT+N LI GLC V + E A GL Q M  EG++AN +TYN+LI  + + G M+
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL + + M  +G   + +T++ LI   C+AGNI+  + L+ +M+ K L P+ +    LI
Sbjct: 565 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL + GN++  L   ++M+   +TP + T +SLI+GL K GR   ALN F    DK   
Sbjct: 625 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF----DKLQV 680

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               P+ + Y  +I   C +G    A  L S        P+  T+  ++   ++
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 256/521 (49%), Gaps = 11/521 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L+ L+       V   + EM+  G+   V T+GV++   C   +V  A  L
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  ++Y  LIH L    ++ E   +   M   G +P++ T+N  + G CK
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +  ++ A +    ML     PN  T+GVLM GLC++G++  A      +      PN+ +
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVL 373

Query: 262 YNCLIDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +N LI+G+   G L EA ++  E M      PD+FTYN LI GLC  G L  A  L+ +M
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   NV+TY  LID +CKEG +E+A +V  +M+ KG+  N V ++ LI   CK   +
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ ++ +M  K   PD+  F +LI GL K    +E L LY++ML   +  +  T ++L
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH   + G +  AL    +   +     C  + + Y  +I+ALC  G I K   LF DM 
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRG----CPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           S  L P+N +   ++ GL R   +   +  L DMI  G+ PD V    ++ G  + G  +
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQDL 601
            A    + L+   I       +T  S+  H K  ++ +  L
Sbjct: 670 EALNLFDKLQVEGICPDAITYNTLISW--HCKEGMFDDAHL 708



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 4/402 (0%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-F 106
           F P+ F+   L+     MG ++EA  +  K+   P +   N L+NG + +G+ D      
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-PNVVLFNTLINGYVSRGRLDEAKAVM 394

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E M+  G   D+ TY  LI   C +G ++ A  L +EM  KG EP V+ YTILI   C 
Sbjct: 395 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 454

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E ++ EA ++   M   G+  N   YN L+   CK   V  AL  + +M     +P++ T
Sbjct: 455 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 514

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+ GLCKV +   A   +  M   GV  N   YN LI    + G + EA+ L ++M 
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D  TYN LIK LC  G +E    L + M  +G+  N ++ N LI+G C+ G+++
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL     M  +G+ P++VT++SLI+G CK G    A+ L+ ++ ++ + PD + +  LI
Sbjct: 635 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
               K+G   +   L    +++   P+  T   L+    K G
Sbjct: 695 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 200/375 (53%), Gaps = 4/375 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK----IEVLPAIQACNALLNGLIKKGKFD 101
           ++P  N  +F+TLI  +   G ++EA  V  +    +   P I   N L+ GL KKG   
Sbjct: 365 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 424

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           S  E   EM + G   +V+TY +LID  C +G + +A N+ DEM  KG+    V Y  LI
Sbjct: 425 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC + K+ +A +MF  M   G  P+++T+N+L+ G CKV     AL  Y +ML   + 
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N +T+  L+    + G ++ A      M   G   +   YN LI   C+AGN+ + ++L
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    ++P+  + NILI GLC  G ++ A   L+ M   G+  ++VTYNSLI+G CK
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G  ++AL++  ++  +G+ P+ +T+++LI   CK G  D A  L +  V    +P+ V 
Sbjct: 665 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 724

Query: 402 FTALIDGLSKDGNMK 416
           +  L+    K+G+ +
Sbjct: 725 WYILVSNFIKEGDQE 739



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 31/376 (8%)

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           L+ +     GYC + DV                     + +L+D L   GE +      +
Sbjct: 115 LFQWAGTQKGYCHMFDV---------------------YYMLIDKLGAAGEFKTTDALLM 153

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNILIKGLCGV 307
            M + G+     ++  ++  + +AG   +A  L  +M   +   P   +YN+++  L   
Sbjct: 154 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG 213

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
              +    +  +M  +GI   V T+  ++   C   +++ A ++   MT  G  PN + +
Sbjct: 214 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 273

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            +LI    K G ++  + L  EM++   +PDV  F   I GL K   + E  +L   ML 
Sbjct: 274 QTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 333

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
              TP+ FT   L+HGL + G++  A    L K         +PN VL+  +I      G
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEA-RMLLNKVP-------NPNVVLFNTLINGYVSRG 385

Query: 488 QILKASKLFSD-MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           ++ +A  +  + M S    PD  TY T++ GL +   ++    L+ +M   G  P+ +  
Sbjct: 386 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445

Query: 547 QVMVRGYQENGDLKSA 562
            +++  + + G L+ A
Sbjct: 446 TILIDRFCKEGRLEEA 461


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 169/602 (28%), Positives = 306/602 (50%), Gaps = 30/602 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVF--STL 58
           +F+ L N  +Y ++  L   + ++L+K+ K   V  +VF  LN LE   F PS F     
Sbjct: 131 LFFALRNEGIYPSSDSLTL-LLDHLVKT-KQFRVTINVF--LNILE-SDFRPSKFMYGKA 185

Query: 59  IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           I A  ++  + + L ++ +++   + P++   N L++GL K  + +   + ++EM+   L
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           +  ++TY  LID  C  G+  K+  + + M    IEP+++ +  L+ GL     + +AE+
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           + + M++ G VP+ +T++ L DGY        AL  Y   +   ++ N  T  +L++ LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G++  A          G+ PN  +YN +IDG+C+ G+L  A      MEK  + PD  
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN LI+  C +G++E AE  + KM  +G+  +V TYN LI GY ++ + +K   +  +M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + G  PNVV++ +LI+  CK   +  A  +  +M  + + P V ++  LIDG    G +
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++  R  KEML+  I  ++ T ++LI GL   G++S A +  LE + K       P+   
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG----LKPDVFT 601

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMML 530
           Y ++I    + G + +   L+ +M+   ++P   TY  ++      G+   +R+      
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG---- 657

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
                +M + PD ++   ++  Y  +GD++ AF   + + E  IG  +T  ++    LG 
Sbjct: 658 -----EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL--ILGQ 710

Query: 591 LK 592
           LK
Sbjct: 711 LK 712



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 255/518 (49%), Gaps = 15/518 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PS+  ++TLI  + + G+ E++  V  +++   + P++   N LL GL K G  +     
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   G V D  T+ +L D          AL +++  +D G++      +IL++ LC 
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ +AE +       G+VPN   YN ++DGYC+  D+  A      M    ++P+ + 
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+   C++GE+  A      M   GV P++  YN LI G+ +     +   +  EME
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                P+V +Y  LI  LC   +L  A+ + + M   G+   V  YN LIDG C +G +E
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A     +M +KG+E N+VT+++LIDG    G +  A  L  E+  K L PDV  + +LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G    GN++  + LY+EM  + I P++ T   LI    K G         +E T++  G
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG---------IELTERLFG 657

Query: 467 GYC-SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P+ ++Y  ++      G + KA  L   M   ++  D  TY +++ G L+  ++ 
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +V  L+ +M    + P+A    ++V+G+ E  D  SA+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 5/438 (1%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A +LF  + ++GI P+    T+L+  L    +     ++F ++ E    P+ + Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            +    K++DV + LE ++ M H  + P+V  + VL+DGLCK   +  A   F  M    
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  YN LIDG+CKAGN  ++  +   M+   I P + T+N L+KGL   G +E AE
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L++M   G + +  T++ L DGY      E AL V     + GV+ N  T S L++  
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G I+ A  +    + K LVP+ V++  +IDG  + G++       + M +  + P  
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              + LI    + G + NA     ++ +K      SP+   Y  +I       +  K   
Sbjct: 425 LAYNCLIRRFCELGEMENA----EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +  +M  +   P+  +Y T++  L +  ++L+  ++  DM   G+ P   I  +++ G  
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540

Query: 555 ENGDLKSAFRCS-EFLKE 571
             G ++ AFR S E LK+
Sbjct: 541 SKGKIEDAFRFSKEMLKK 558



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 204/406 (50%), Gaps = 7/406 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++T+I  +   G +  A      +E   + P   A N L+    + G+ ++  +  
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M L G+   V TY +LI     + +  K  ++  EM D G  P VV Y  LI+ LC  
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +K++EA+ + R M + GV P +  YN L+DG C    +  A  F  EML   ++ N+VT+
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGL   G+L  A +  + +++ G+ P++F YN LI G+  AGN+   ++L  EM++
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P + TY++LI  LC    +E  E L  +M    +  +++ YN ++  Y   GDMEK
Sbjct: 628 SGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++  QM EK +  +  T++SLI GQ K G +     L  EM  + + P+   +  ++ 
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           G  +  +       Y+EM E      V   + L+ GL +  R   A
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 44/289 (15%)

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           LF A SL S   K +     F+Y +L   L     +  A  L   +  EGI  +  +   
Sbjct: 95  LFSAFSLSSPSLKHD-----FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTL 149

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+D   K       ++V   + E    P+   +   I    K  ++   + L+  M    
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P V ++  LIDGL K   M +  +L+ EML  ++ PS+ T ++LI             
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID------------ 257

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                       GYC                 G   K+ K+   M++D++ P   T+ T+
Sbjct: 258 ------------GYCKA---------------GNPEKSFKVRERMKADHIEPSLITFNTL 290

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+GL +A  + D   +L +M  +G VPDA    ++  GY  N   ++A 
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 244/477 (51%), Gaps = 4/477 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   + N ++ G+ + G+     E ++EM    ++ + +TY  +ID     GD+     L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D+M+  G++P  + Y +L+ GLC   +M E  ++   M    +VP+ +TY+ L DG  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D    L  + + L + +     T  +L++GLCK G++  A      +   G+ P   +
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G+C+ G L  A S   +M+   I PD  TYN LI GLC   ++  A+ LL +M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+   V T+N+LID Y + G +EK   V S+M E G++PNVV++ S+++  CK G I 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ +  +M  K ++P+  V+ A+ID   + G   +   L ++M    I+PS+ T + LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL    +IS A     E  +        P+ V Y  +I A CY G I KA  L   M  
Sbjct: 373 KGLCNQSQISEA----EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK 428

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             ++    TY  ++ GL  A R+ ++  L   M++  +VP   I+ +MV  Y + G+
Sbjct: 429 YGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 220/443 (49%), Gaps = 4/443 (0%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D    P    Y ++I G+    +  +A  +F  M E  V+PN  TYN ++DG+ K  D+ 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
                  +M+ H L+PN +T+ VL+ GLC+ G +         MA   + P+ F Y+ L 
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG  + G+    +SL  +  K  ++   +T +IL+ GLC  G++  AE +LQ +   G++
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
              V YN+LI+GYC+ G++E A S   QM  + ++P+ +T+++LI+G CKA  I  A  L
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM    + P V  F  LID   + G +++   +  EM E  + P+V +  S+++   K
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           NG+I  A+    +   K       PN  +Y AII A    G   +A  L   M+S+ + P
Sbjct: 308 NGKIPEAVAILDDMFHKD----VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
              TY  +++GL    ++ +   ++  +    ++PDAV    ++      G++  A    
Sbjct: 364 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 423

Query: 567 EFLKESRIGSSETEGHTTRSFLG 589
           + + +  I S+    H   S LG
Sbjct: 424 QRMHKYGIKSTVRTYHQLISGLG 446



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 197/379 (51%), Gaps = 3/379 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    S  G  +  L +   Y K  V      C+ LLNGL K GK     E  + +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C  G++  A + F +M  + I+P  + Y  LI+GLC   ++
Sbjct: 182 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+ +   M++ GV P + T+N L+D Y +   + +      EM  + L+PNVV++G +
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++  CK G++  A      M    V PN  VYN +ID + + G   +A  L  +M+   I
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP + TYN+LIKGLC   Q+  AE ++  +    ++ + V+YN+LI   C  G+++KAL 
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G++  V T+  LI G   AG ++    LY +M+  ++VP   +   +++  S
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 481

Query: 411 KDGNMKETLRLYKEMLEAK 429
           K GN  +   L KEML+ +
Sbjct: 482 KYGNEIKAEDLRKEMLQKR 500


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 248/495 (50%), Gaps = 9/495 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            +ST+I  F + G ++ A  + R++     + P +    ++++GL + GK D   E   E
Sbjct: 79  TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNEN 168
           M L G+  D  T+  LI   C    V +AL L+ E++     +P VV YT LI G C   
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + +A  M   M     VPN+ TY++L+ G CK  D+++AL+ +  M      PNVVT+ 
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+ GLC   ++ AA      M      P+   YN L+DG+C+ G + EA  L  EM   
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVVTYNSLIDGYCKEGDMEK 347
              PD  TY  L++G C   +LE A  LL+ M    GI  +VVTY+ ++ GY +     +
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 378

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     +M  + V PN VT+SSLIDG CKAG +D AM +   MV K + P V  F ++I 
Sbjct: 379 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIG 438

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L + G+M E  +L   M    + P + T ++L+ G  + GR+  A   F     K    
Sbjct: 439 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKS 498

Query: 468 YCSPNHV---LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             + N V    ++A+I+ LC   +I KA  +  ++RS    P       ++ GLLRA R 
Sbjct: 499 SSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRT 558

Query: 525 LDVMMLLADMIKMGI 539
            +   L+  + K+G+
Sbjct: 559 EEAGKLINSISKVGL 573



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 250/498 (50%), Gaps = 11/498 (2%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           +E  P +     +++G  K  +       +E+M    +  +  TY V+++  C      K
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSK 59

Query: 138 ALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTYNA 194
           A  +  EM D K + P +V Y+ +I+G C + +M  A  + R M  R+ G+ P++ TY +
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRD-GIAPDVVTYTS 118

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++DG C+   ++RA E   EM    ++P+  TF  L+ G C   ++  A   +  +    
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 255 VF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            + P++  Y  LIDG CK+GNL +AM +   ME  +  P+V TY+ L+ GLC  G L+ A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L ++M  +G + NVVTY +LI G C    ++ A  +  +MT     P+ V++++L+DG
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM-LEAKITP 432
            C+ G I+ A  L+ EM  KS +PD + +T L+ G      ++E   L + M   A I P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V T S ++ G  +  R   A  F  E   +      +PN V Y+++I  LC  G++  A
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN----VAPNAVTYSSLIDGLCKAGRVDHA 414

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++  +M +  + P   T+ +++  L R   M +   LL  M   G+ P  V    ++ G
Sbjct: 415 MEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 474

Query: 553 YQENGDLKSAFRCSEFLK 570
           +   G ++ A+   E ++
Sbjct: 475 FSRTGRMEIAYELFEVMR 492


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 239/467 (51%), Gaps = 20/467 (4%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+ ++ +LI C C    +  AL+ F ++   G  PT+V +  L+HGLC E+++ EA  +F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M +    PN+ T+  LM+G C+   V  A+     M+   LQPN +T+G ++DG+CK+
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 238 GELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           G+  +A N    M +   + P++ +Y+ +IDG  K G   +A +L  EM+   I PD+ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+ +I G C  G+   A+ LLQ+M    I  +VVT++ LI+   KEGD+  A  +  +M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-----------VIKSLVPDVVVFTAL 405
             GV PNVVT ++L+DG C +G +  A+ ++  M               + PDV  +  L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL  +G   E   LY+EM    I P   T SS+I+GL K  R+  A   F    D   
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF----DSMG 365

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               SPN V +  +I   C  G +    +LF +M    +  +  TY T++RG  +   + 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             + +  +MI  G+ PD +  + M+ G     +LK A    E L+ S
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 240/437 (54%), Gaps = 18/437 (4%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           S F  L  L    F+P++  F+TL+        + EAL ++ ++   P +     L+NGL
Sbjct: 36  STFGKLTKL---GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM-CKPNVVTFTTLMNGL 91

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPT 153
            ++G+        + MV  GL  + +TYG ++D  C  GD + ALNL  +M +   I+P 
Sbjct: 92  CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPD 151

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VVIY+ +I GL  + +  +A+++F  M++ G+ P++ TY+ +++G+C     + A     
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML   + P+VVTF  L++ L K G+L +A +    M   GV PN+   N L+DG C +G
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSG 271

Query: 274 NLFEAMSLCSEMEKF-----------EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
            L +A+ +   M+K             + PDV TYNILI GL   G+   AE L ++M  
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI+ + VTY+S+I+G CK+  +++A  +   M  K   PN+VTF++LI G CKAG +D 
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            + L+ EM  + +V + + +  LI G  K GN+  +L +++EM+ + + P   T+ +++ 
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451

Query: 443 GLFKNGRISNALNFFLE 459
           GL+    +  AL    E
Sbjct: 452 GLWSKEELKKALAMLEE 468



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 216/435 (49%), Gaps = 57/435 (13%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    +VT+  L+   C +  V +AL+LF +M     +P VV +T L++GLC E ++VEA
Sbjct: 45  GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEA 100

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM--LHHNLQPNVVTFGVLM 231
            ++   M E G+ PN  TY  ++DG CK+ D   AL    +M  L H ++P+VV +  ++
Sbjct: 101 VALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH-IKPDVVIYSAII 159

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGL K G    A N F+ M   G+FP+I  Y+C+I+G C +G   EA  L  EM   +IS
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS- 350
           PDV T++ LI  L   G L  A+ LLQ+M   G+  NVVT N+L+DG C  G ++ AL  
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 351 ---------------------------------------------VCSQMTEKGVEPNVV 365
                                                        +  +M  +G+ P+ V
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+SS+I+G CK   +D A  ++  M  KS  P++V F  LI G  K G + + L L+ EM
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
               I  +  T  +LI G  K G I+ +L+ F E    + G Y  P+ +    ++  L  
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI--SSGVY--PDTITIRNMLTGLWS 455

Query: 486 DGQILKASKLFSDMR 500
             ++ KA  +  +++
Sbjct: 456 KEELKKALAMLEELQ 470



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 157/286 (54%), Gaps = 9/286 (3%)

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +I  D++++NILIK  C   +L  A     K+ K G    +VT+N+L+ G C E  + +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +  QM     +PNVVTF++L++G C+ G +  A+ L   MV   L P+ + +  ++D
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 408 GLSKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           G+ K G+    L L ++M E + I P V   S++I GL+K+GR ++A N F+E  DK  G
Sbjct: 125 GMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK--G 182

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            +  P+ V Y+ +I   C  G+  +A +L  +M    + PD  T++ ++  L++   +  
Sbjct: 183 IF--PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
              LL +MI  G+ P+ V    ++ G  ++G LK A    + +++S
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 16/261 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L  + + K +P V  FS LI A  + G +  A  + +++    V P +  CN LL+GL  
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 97  KGKFDSVWEFYEEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
            GK     E ++ M              G+  DV TY +LI     +G  ++A  L++EM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
             +GI P  V Y+ +I+GLC ++++ EA  MF SM      PN+ T+N L+ GYCK   V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           +  LE + EM    +  N +T+  L+ G  KVG +  + + F  M   GV+P+      +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 266 IDGHCKAGNLFEAMSLCSEME 286
           + G      L +A+++  E++
Sbjct: 450 LTGLWSKEELKKALAMLEELQ 470


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 239/467 (51%), Gaps = 20/467 (4%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+ ++ +LI C C    +  AL+ F ++   G  PT+V +  L+HGLC E+++ EA  +F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M +    PN+ T+  LM+G C+   V  A+     M+   LQPN +T+G ++DG+CK+
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 238 GELRAAGNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           G+  +A N    M +   + P++ +Y+ +IDG  K G   +A +L  EM+   I PD+ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+ +I G C  G+   A+ LLQ+M    I  +VVT++ LI+   KEGD+  A  +  +M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-----------VIKSLVPDVVVFTAL 405
             GV PNVVT ++L+DG C +G +  A+ ++  M               + PDV  +  L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL  +G   E   LY+EM    I P   T SS+I+GL K  R+  A   F    D   
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF----DSMG 365

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               SPN V +  +I   C  G +    +LF +M    +  +  TY T++RG  +   + 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             + +  +MI  G+ PD +  + M+ G     +LK A    E L+ S
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 240/437 (54%), Gaps = 18/437 (4%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           S F  L  L    F+P++  F+TL+        + EAL ++ ++   P +     L+NGL
Sbjct: 36  STFGKLTKL---GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM-CKPNVVTFTTLMNGL 91

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID-KGIEPT 153
            ++G+        + MV  GL  + +TYG ++D  C  GD + ALNL  +M +   I+P 
Sbjct: 92  CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPD 151

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VVIY+ +I GL  + +  +A+++F  M++ G+ P++ TY+ +++G+C     + A     
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EML   + P+VVTF  L++ L K G+L +A +    M   GV PN+   N L+DG C +G
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSG 271

Query: 274 NLFEAMSLCSEMEKF-----------EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
            L +A+ +   M+K             + PDV TYNILI GL   G+   AE L ++M  
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI+ + VTY+S+I+G CK+  +++A  +   M  K   PN+VTF++LI G CKAG +D 
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            + L+ EM  + +V + + +  LI G  K GN+  +L +++EM+ + + P   T+ +++ 
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451

Query: 443 GLFKNGRISNALNFFLE 459
           GL+    +  AL    E
Sbjct: 452 GLWSKEELKRALAMLEE 468



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 157/286 (54%), Gaps = 9/286 (3%)

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +I  D++++NILIK  C   +L  A     K+ K G    +VT+N+L+ G C E  + +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +  QM     +PNVVTF++L++G C+ G +  A+ L   MV   L P+ + +  ++D
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 408 GLSKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           G+ K G+    L L ++M E + I P V   S++I GL+K+GR ++A N F+E  DK  G
Sbjct: 125 GMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK--G 182

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            +  P+ V Y+ +I   C  G+  +A +L  +M    + PD  T++ ++  L++   +  
Sbjct: 183 IF--PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
              LL +MI  G+ P+ V    ++ G  ++G LK A    + +++S
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 16/261 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L  + + K +P V  FS LI A  + G +  A  + +++    V P +  CN LL+GL  
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 97  KGKFDSVWEFYEEM-----------VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
            GK     E ++ M              G+  DV TY +LI     +G  ++A  L++EM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
             +GI P  V Y+ +I+GLC ++++ EA  MF SM      PN+ T+N L+ GYCK   V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           +  LE + EM    +  N +T+  L+ G  KVG +  + + F  M   GV+P+      +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 266 IDGHCKAGNLFEAMSLCSEME 286
           + G      L  A+++  E++
Sbjct: 450 LTGLWSKEELKRALAMLEELQ 470


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/546 (29%), Positives = 265/546 (48%), Gaps = 40/546 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN--------------- 92
           NP  F        E+GH+ EA  +  K+    ++  + +CNA L+               
Sbjct: 189 NPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKV 248

Query: 93  ------------------GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
                              L + GK         +M       DVV+Y  +ID  C  G+
Sbjct: 249 FCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE 308

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + KAL L D+M  KG++P    Y  +I  LC   K  EAE + R M    ++P+   Y  
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+ K+  V  A +++ EML   + P+ +T+  L+ G  + G++    N F  M   G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+   Y  LID +CKAG +  A SL +EM +  ++P++ TY  LI GLC  G+L+ A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M K+G+  NV  YNS+++G CK G++E+A+ +  +M   G++P+ +T++++ID  
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G+ID A  L  EM+ + L P VV F  L++G    G +++  RL   MLE  I P  
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++L+    K   I N++N   +   +      +P+   Y  +I+  C    + +A  
Sbjct: 609 ITYNTLM----KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+ +M      P   +Y  +++   + K++L+   L  +M   G+V D  I    V    
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 555 ENGDLK 560
           E GD++
Sbjct: 725 EEGDVE 730



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 196/377 (51%), Gaps = 3/377 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TLI  F ++GH+  A   + ++   ++ P       L+ G  + GK       + EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  D VTY  LID  C  G+++ A +L +EM+  G+ P +V Y  LI GLC   ++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   MR+ G+  N+  YN++++G CK  ++ +A++   EM    + P+ +T+  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D  C++G++  A      M   G+ P +  +N L++G C  G L +   L   M +  I
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYN L+K  C    +     + ++M  +G+  +  TYN LI G+CK  ++++A  
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EKG  P V ++++LI    K   I  A  L+ EM    LV D  ++   +D   
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 411 KDGNMKETLRLYKEMLE 427
           ++G+++ TL L  E +E
Sbjct: 725 EEGDVEITLNLCDEAIE 741



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 49  KFNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           K +P    ++TLI  F + G + E   ++ ++    + P       L++   K G+  + 
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +  + EMV  G+  ++VTYG LID  C  G++  A  L DEM  KG++  V IY  +++G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           +C    + +A  + + M   G+ P+  TY  ++D YC++ D+++A +   EML   LQP 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVTF VLM+G C +G L         M + G+ P+   YN L+  HC   ++     +  
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M    ++PD  TYNILIKG C    L+ A  L ++M ++G +  V +YN+LI  + K+ 
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            + +A  +  +M   G+  +   ++  +D   + G+++  + L  E + K L+
Sbjct: 693 KILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 213/424 (50%), Gaps = 8/424 (1%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  + + I    L     + EA  +   +   G+V  + + NA +    ++A+ +  +E 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEM 244

Query: 212 YHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
             ++   + +  N  ++ +++  LC++G+++ A    + M      P++  Y+ +IDG+C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G L +A+ L  +M+   + P+ +TYN +I  LC +G+   AE +L++M  + I+ + V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y +LI G+ K G +  A     +M  K + P+ +T+++LI G  + G +     L+ EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + + L PD V +T LID   K G M     L+ EM++  +TP++ T  +LI GL K+G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A N  L++  K        N  +Y +++  +C  G I +A KL  +M    + PD  T
Sbjct: 485 DTA-NELLDEMRKKG---LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           YTT++    R   +     LL +M+  G+ P  V   V++ G+   G L+   R   ++ 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 571 ESRI 574
           E  I
Sbjct: 601 EKGI 604



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 182/372 (48%), Gaps = 19/372 (5%)

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +A V+  L   HE++H     + +  GV M             +  ++  K+   PN   
Sbjct: 143 IAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFT---------HRLIYTYKYWG-PNPIA 192

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           ++       + G+L EA  L  ++  + +   V + N  +  +      EG E  ++   
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN--NSEGIEMAIKVFC 250

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + GI  N  +YN +I   C+ G +++A  +  QM  +   P+VV++S++IDG C  G + 
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L  +M IK L P+   + ++I  L K G   E  ++ +EM+  KI P     ++LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HG FK G +  A  +F E   K      SP+++ Y  +IQ     G++++   LF +M S
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKK----ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L+PD  TYTT++    +A  M++   L  +M++MG+ P+ V    ++ G  ++G+L +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486

Query: 562 AFRCSEFLKESR 573
           A   +E L E R
Sbjct: 487 A---NELLDEMR 495


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 270/549 (49%), Gaps = 46/549 (8%)

Query: 52  PSVFSTLIIAFSEMGHIEE---ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           PSVF TL+   ++ G +++   AL   R++ V P  + CN +L  L +  +   V   +E
Sbjct: 133 PSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFE 192

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            +       +V T+ ++ID  C QG++++A  LF  M   G  P VV Y  LI G     
Sbjct: 193 HLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ E E +   MR+ G   ++ TYNAL++ + K   + +A  ++ EM    +  NVVT  
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
             +D  CK G +R A   F  M   G+ PN F Y  L+DG CKAG L +A+ L  EM   
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P+V TY +++ GLC  G++  A+ +L  M + G+ AN + Y +LI G+    + E+A
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L + ++M  KG+E +V  + +LI G CK   +D A  L  +M    L P+ V++T ++D 
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K G   E + L  ++ ++ + P+V T  +LI GL K G I  A++ F    DK     
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF----DKMRELG 544

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG----------- 517
             PN  +Y  +I   C  G + KA  L ++M    +  D   YT+++ G           
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF 604

Query: 518 LLRAK------------------------RMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L+AK                         M +   +L++MI  GI PD      ++R Y
Sbjct: 605 ALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKY 664

Query: 554 QENGDLKSA 562
           Q+ G+++ A
Sbjct: 665 QKLGNMEEA 673



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/479 (33%), Positives = 249/479 (51%), Gaps = 17/479 (3%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
            +P  N   F+ +I    + G + EA  ++ +++ +   P +   N+L++G  K G+ + 
Sbjct: 193 HLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEE 252

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           V     EM   G  ADVVTY  LI+C    G + KA + F EM   G+   VV  +  + 
Sbjct: 253 VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVD 312

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             C E  + EA  +F  MR  G++PN +TY +L+DG CK   ++ A+    EM+H  L P
Sbjct: 313 AFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 372

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+ V++DGLCK G++  A +    M + GV  N  +Y  LI GH    N   A+ L 
Sbjct: 373 NVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLL 432

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           +EM+   +  DV  Y  LI GLC V +L+ A+ LL KM   G+  N V Y +++D + K 
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G   +A+++  ++ + G++PNVVT+ +LIDG CKAG+I  A+  + +M    L P+V V+
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LIDG  K G++ + + L  EM++  ++      +SLI G  K G +  A   F  K  
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA---FALKAK 609

Query: 463 KTDGG-----YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
             + G     YC      Y   I   C    + +A  + S+M    + PD   Y  ++R
Sbjct: 610 MIETGLQLDLYC------YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/420 (32%), Positives = 212/420 (50%), Gaps = 10/420 (2%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           ++  L+  L +   + +A      +R+  V PN  T N ++    +    NR       +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR----NRQGGLVRRL 190

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
             H   PNV TF +++D LCK GEL  A   FV M   G  P++  YN LIDG+ K G L
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            E   L SEM K   + DV TYN LI      G +E A     +M + G++ANVVT ++ 
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           +D +CKEG + +A+ + +QM  +G+ PN  T++SL+DG CKAG +D A+ L  EMV + L
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VP+VV +T ++DGL K+G +     +   M  A +  +    ++LIHG F N     AL+
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  +K        +  LY  +I  LC   ++ +A  L   M    LRP+   YTT++
Sbjct: 431 LLNEMKNKG----MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
               +A +  + + LL  +   G+ P+ V    ++ G  + G +  A   S F K   +G
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI--SHFDKMRELG 544



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + + S++ TLI    ++  ++EA  +  K++   + P       +++   K GK      
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              ++   GL  +VVTY  LID  C  G + +A++ FD+M + G++P V +YT LI G C
Sbjct: 501 LLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFC 560

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               + +A  +   M + G+  +   Y +L+DG+ K  D+  A     +M+   LQ ++ 
Sbjct: 561 KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +   + G C +  ++ A      M   G+ P+   YNCLI  + K GN+ EA SL +EM
Sbjct: 621 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680

Query: 286 E 286
           E
Sbjct: 681 E 681



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 10/287 (3%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P VF  + L+  L   G L+ A   L ++ +  +  N  T N ++    +     +   +
Sbjct: 133 PSVF--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN----RQGGL 186

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             ++ E    PNV TF+ +ID  CK G +  A  L+  M      PDVV + +LIDG  K
Sbjct: 187 VRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G ++E   L  EM ++     V T ++LI+   K G I  A ++F E   K  G     
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM--KRLG--VMA 302

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V  +  + A C +G + +A KLF+ MR   + P+  TYT+++ G  +A R+ D ++LL
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            +M+  G+VP+ V   VMV G  + G +  A      ++ + + ++E
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANE 409


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 233/444 (52%), Gaps = 7/444 (1%)

Query: 67  HIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
              EAL ++ ++     LP+I     LL+ + K  +FD V   +E+M + G+   + T  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           ++++C C      +A     +M+  G EP +V +T L+HG C+ N++ +A ++F  +   
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  PN+ TY  L+   CK   +N A+E +++M  + ++PNVVT+  L+ GLC++G    A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M K G+ PN+  +  LID   K G + EA  L   M +  + PDVFTY  LI G
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G+L+ A  +   M   G   N VTY +LI G+CK   +E    +  +M++KG+  N
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            +T++ LI G C  G  D A  ++ +M  +   PD+  +  L+DGL  +G +++ L ++K
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M + ++  ++ T + +I G+ K G++ +A + F     K       PN + Y  +I   
Sbjct: 422 YMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG----MKPNVITYTTMISGF 477

Query: 484 CYDGQILKASKLFSDMRSDNLRPD 507
           C  G I +A  LF  M+ D   P+
Sbjct: 478 CRRGFIHEADALFKKMKEDGFLPN 501



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 221/420 (52%), Gaps = 7/420 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEF 106
           PS+  F+ L+   ++M   +  + ++ ++++L   P +  CN ++N + +  +      F
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +M+  G   D+VT+  L+   C    +  AL LFD+++  G  P VV YT LIH LC 
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A  +F  M + G+ PN+ TYN+L+ G C++   + A     +M+   +QPNV+T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+D   KVG++  A   +  M +  V+P++F Y  LI+G C  G L EA  +   ME
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                P+  TY  LI G C   ++E    +  +M ++G++AN +TY  LI GYC  G  +
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  V +QM  +   P++ T++ L+DG C  G ++ A+ ++  M  + +  ++V +T +I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G+ K G +++   L+  +    + P+V T +++I G  + G I  A   F  K  K DG
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALF--KKMKEDG 497



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 217/453 (47%), Gaps = 5/453 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L NGL    +F+   + +  MV    +  +V +  L+            ++LF++M   G
Sbjct: 54  LRNGL-HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILG 112

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I P +    I+++ +C  ++   A      M + G  P+L T+ +L+ G+C    +  AL
Sbjct: 113 ISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDAL 172

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             + +++    +PNVVT+  L+  LCK   L  A   F  M   G+ PN+  YN L+ G 
Sbjct: 173 ALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGL 232

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+ G   +A  L  +M K  I P+V T+  LI     VG++  A+ L + M +  +  +V
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TY +LI+G C  G +++A  +   M   G  PN VT+++LI G CK+  ++    ++ E
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYE 352

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K LV + + +T LI G    G       ++ +M   +  P + T + L+ GL  NG 
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  AL  F     +        N V Y  IIQ +C  G++  A  LF  + S  ++P+  
Sbjct: 413 VEKALMIFKYMRKRE----MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVI 468

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           TYTTM+ G  R   + +   L   M + G +P+
Sbjct: 469 TYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 201/435 (46%), Gaps = 32/435 (7%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           IL +GL N  +  EA  +F  M     +P++  +  L+    K+   +  +  + +M   
Sbjct: 53  ILRNGLHNL-QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            + P + T  ++M+ +C+  +   A  F   M K G  P++  +  L+ G C    + +A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           ++L  ++      P+V TY  LI  LC    L  A  +  +M   GI  NVVTYNSL+ G
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C+ G    A  +   M ++G++PNV+TF++LID   K G I  A  LY  M+  S+ PD
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPD 291

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  +TALI+GL   G + E  +++  M      P+  T ++LIHG  K+ R+ +    F 
Sbjct: 292 VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351

Query: 459 EKTDK-----------TDGGYC--------------------SPNHVLYAAIIQALCYDG 487
           E + K              GYC                     P+   Y  ++  LCY+G
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + KA  +F  MR   +  +  TYT +++G+ +  ++ D   L   +   G+ P+ +   
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471

Query: 548 VMVRGYQENGDLKSA 562
            M+ G+   G +  A
Sbjct: 472 TMISGFCRRGFIHEA 486



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 152/307 (49%), Gaps = 5/307 (1%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVL 81
           L K+R  +H    +FN +    I + N   +++L+    E+G   +A W+ R   K  + 
Sbjct: 197 LCKNRHLNHAV-EIFNQMGDNGI-RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +    AL++  +K GK     E Y+ M+   +  DV TY  LI+  C  G + +A  +
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M   G  P  V YT LIHG C   ++ +   +F  M + G+V N  TY  L+ GYC 
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V   + A E +++M      P++ T+ VL+DGLC  G +  A   F +M K  +  NI  
Sbjct: 375 VGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVT 434

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  +I G CK G + +A  L   +    + P+V TY  +I G C  G +  A+ L +KM 
Sbjct: 435 YTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494

Query: 322 KEGILAN 328
           ++G L N
Sbjct: 495 EDGFLPN 501


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 271/563 (48%), Gaps = 44/563 (7%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           VF  +N+    KF P++  ++T++++ S+   I+E   VY ++   ++ P I   NA++N
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTY-----------GV----------------- 124
           G  K G       +  ++V  GL  D  TY           GV                 
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262

Query: 125 -------LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
                  LI   C  G + +AL LF +M +    PTV  YT+LI+ L    + VEA ++F
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M+E G  PN++TY  L+DG CK   ++ A +   EM    L P+VVT+  L+DG CK 
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE 382

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A      M      PN   YN LI G CK   + +AM+L ++M + ++SP + TY
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G C V  LE A  LL  M + G++ +  TY+  ID  CKEG +E+A ++   +  
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KGV+ N V +++LIDG CK G ID A  L   M+  + +P+   +  LI+GL K+  MKE
Sbjct: 503 KGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKE 562

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L  +ML   + P+V T + LI  + K+G   +AL  F         GY  P+   Y 
Sbjct: 563 ASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF---NHMVSLGY-QPDVCTYT 618

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A + A    G + +   + + M  + + PD  TYT ++ G  R          L  M+  
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 538 GIVPDAVINQVMVRGYQENGDLK 560
           G  P   I  ++++       +K
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMK 701



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 244/511 (47%), Gaps = 30/511 (5%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++GL + G+ +   + + +M        V TY VLI    G G  ++ALNLF+EM +KG
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            EP V  YT+LI GLC ENKM EA  M   M E G++P++ TYNAL+DGYCK   ++ A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E    M  ++  PN  T+  L+ GLCK  ++  A      M +  + P++  YN LI G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK  +L  A  L S M +  + PD +TY++ I  LC  G++E A  L   +  +G+ AN 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y +LIDGYCK G ++ A S+  +M      PN  T++ LI+G CK   +  A  L  +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+   + P VV +T LI  + KDG     L+++  M+     P V T ++ +H  F  G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG- 628

Query: 450 ISNALNFFLEKTD----KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
                   LE+ D    K +     P+ V Y  +I      G   +A      M     +
Sbjct: 629 -------MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681

Query: 506 PDNCTYTTMLRGLLRAKRMLDV------------------MMLLADMIKMGIVPDAVINQ 547
           P     + +++ L    RM +                   + L   M++ G   D  I  
Sbjct: 682 PSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYG 741

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            ++ G+ +   L+ A      +KE  +  SE
Sbjct: 742 ALIAGFCQQERLEEAQGLVHHMKERGMSPSE 772



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 235/478 (49%), Gaps = 42/478 (8%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKG---IEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +I  CC   DV+  L +F +M   G    +PT+  Y  ++  L     + E ++++  + 
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              + PN+YT+NA+++GYCK+ +V  A  +  +++   L P+  T+  L+ G C+   + 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F+ M + G   N   Y  LI G C+AG + EA+ L ++M +    P V TY +LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             L G G+   A  L  +M ++G   NV TY  LIDG CKE  M++A  + S+M+EKG+ 
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VVT+++LIDG CK G ID A  +   M   S  P+   +  LI GL K   + + + L
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL 426

Query: 422 YKEMLEAKITPSVFTVSSLIHG-----------------------------------LFK 446
             +MLE K++PS+ T +SLIHG                                   L K
Sbjct: 427 LNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCK 486

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR+  A   F    D         N V+Y A+I   C  G+I  A  L   M +D   P
Sbjct: 487 EGRVEEAGTLF----DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           ++ TY  ++ GL + K+M +   L+A M+ MG+ P  V   +++    ++G    A +
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 259/547 (47%), Gaps = 51/547 (9%)

Query: 68  IEEALWV---YRKI------EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           IE+ L+V   +RK+      +  P ++  N +L  L K    D +   Y E++   +  +
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           + T+  +++  C  G+V++A     +++  G+ P    YT LI G C    +  A  +F 
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M + G   N  +Y  L+ G C+   +N AL+ + +M   N  P V T+ VL+  L   G
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
               A N F  M + G  PN+  Y  LIDG CK   + EA  + SEM +  + P V TYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G ++ A  +L  M       N  TYN LI G CK+  + KA+++ ++M E+
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            + P+++T++SLI GQCK  ++++A  L + M    LVPD   ++  ID L K+G ++E 
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L+  +    +  +    ++LI G  K G+I  A +      ++     C PN   Y  
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL----ERMLNDACLPNSYTYNV 549

Query: 479 IIQALCYD-----------------------------GQILK------ASKLFSDMRSDN 503
           +I+ LC +                             G++LK      A K+F+ M S  
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +PD CTYT  L        + +V  ++A M + GI+PD V   V++ GY   G    AF
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 564 RCSEFLK 570
              +FLK
Sbjct: 670 ---DFLK 673



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 247/559 (44%), Gaps = 62/559 (11%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A S  G   EAL ++ +++     P +     L++GL K+ K D   + 
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQG--------------------------------- 133
             EM   GL+  VVTY  LID  C +G                                 
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416

Query: 134 --DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
              V KA+ L ++M+++ + P+++ Y  LIHG C  N +  A  +   M E G+VP+ +T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y+  +D  CK   V  A   +  +    ++ N V +  L+DG CKVG++  A +    M 
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                PN + YN LI+G CK   + EA SL ++M    + P V TY ILI  +   G  +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +   M   G   +V TY + +  Y  +G +E+   V ++M E+G+ P++VT++ LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET------------- 418
           DG  + G    A      MV     P + + + LI  LS +  MKET             
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTL 716

Query: 419 -----LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
                L+L+++M+E   T  V    +LI G  +  R+  A        ++      SP+ 
Sbjct: 717 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG----MSPSE 772

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
            +Y +++   C  G   +A +L   M  + L P   +Y  ++ GL           +   
Sbjct: 773 DIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHG 832

Query: 534 MIKMGIVPDAVINQVMVRG 552
           ++  G   D V  +V++ G
Sbjct: 833 LLSCGYNYDEVAWKVLIDG 851



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 197/485 (40%), Gaps = 91/485 (18%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    +   + +A+ +  K+   ++ P++   N+L++G  K    +S +   
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GLV D  TY V ID  C +G V +A  LFD +  KG++   VIYT LI G C  
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  A S+   M     +PN YTYN L++G CK   +  A     +ML   ++P VVT+
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------------- 254
            +L+  + K G    A   F HM   G                                 
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 255 --VFPNIFVYNCLIDGHCKAG--------------------------------------- 273
             + P++  Y  LIDG+ + G                                       
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 274 -----------NLFE---AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
                      N  E   A+ L  +M +   + DV  Y  LI G C   +LE A+GL+  
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  +   YNSL+D  CK G   +A+ +   M E G+ P + ++  L+ G    G+
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + A  ++  ++      D V +  LIDGL K   + E   L   M E    P+  T S 
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882

Query: 440 LIHGL 444
           LI GL
Sbjct: 883 LIEGL 887



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 21/384 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  +++ LI  + ++G I+ A  +  ++     LP     N L+ GL K+ K      
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M+  G+   VVTY +LI      G    AL +F+ M+  G +P V  YT  +H   
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           ++  + E + +   M E G++P+L TY  L+DGY ++   +RA +F   M+    +P++ 
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685

Query: 226 TFGVLM------------------DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
              +L+                  D +    E   A   F  M + G   ++ +Y  LI 
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 745

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+   L EA  L   M++  +SP    YN L+   C +G    A  L+  M + G+L 
Sbjct: 746 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 805

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            + +Y  L+ G   EG  EKA +V   +   G   + V +  LIDG  K   +D    L 
Sbjct: 806 LLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELI 865

Query: 388 TEMVIKSLVPDVVVFTALIDGLSK 411
             M  K   P+ + ++ LI+GL +
Sbjct: 866 DIMEEKGCQPNPLTYSLLIEGLER 889



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 48/292 (16%)

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           S+I   C   D+   L V  +M   G    +P +  +++++    K   ID    +Y E+
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   + P++  F A+++G  K GN+ E      ++++A + P  FT +SLI G  +N  +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN------- 503
            NA   FL    K     C  N V Y  +I  LC  G+I +A KLF+DM  DN       
Sbjct: 246 DNAYEVFLIMPQKG----CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT 301

Query: 504 ----------------------------LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
                                         P+  TYT ++ GL +  +M +   +L++M 
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           + G++P  V    ++ GY + G +  AF   + ++      S + G  TR++
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME------SNSCGPNTRTY 407



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 26/290 (8%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           VFN + SL    + P V  ++  + A+   G +EE   V  K+    +LP +     L++
Sbjct: 601 VFNHMVSL---GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI------------------DCCCGQGD 134
           G  + G     ++F + MV  G    +    +LI                  D      +
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLE 717

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              AL LF++M++ G    V IY  LI G C + ++ EA+ +   M+E G+ P+   YN+
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 777

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+D  CK+     A+     M+ + L P + ++ +L+ GL   G    A   F  +   G
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 837

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
              +   +  LIDG  K   + E   L   ME+    P+  TY++LI+GL
Sbjct: 838 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 21/224 (9%)

Query: 344 DMEKALSVCSQMT-EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL--VPDVV 400
           D + ALS  + +    G + NV ++SS+++   +A  +  A  +   M IKS   + DV+
Sbjct: 80  DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISM-IKSCCSIEDVL 138

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
               +   ++ DG             E K  P++   ++++  L K   I      +LE 
Sbjct: 139 FVLEVFRKMNADG-------------EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +       SPN   + A++   C  G +++A    S +    L PD  TYT+++ G  R
Sbjct: 186 LNNQ----ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR 241

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            K + +   +   M + G   + V    ++ G  E G +  A +
Sbjct: 242 NKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/555 (30%), Positives = 269/555 (48%), Gaps = 45/555 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + +  + S L+  F E    +EAL   ++R  E+  +P + + N LL  L  +GK     
Sbjct: 145 RVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQAD 204

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   DVV Y  +ID    +GDV KA +LF EM+ +GI P +V Y+ ++H
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M   GV+P+ +TYN L+ GY        A+  + EM   ++ P
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 324

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +VV    LM  LCK G+++ A + F  MA  G  P++F Y  +++G+   G L +   L 
Sbjct: 325 DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF 384

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M    I+PD++T+N+LIK     G L+ A  +  +M   G+  +VVTY ++I   C+ 
Sbjct: 385 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI 444

Query: 343 GDMEKALSVCSQMTEKGVEPN-----------------------------------VVTF 367
           G M+ A+   +QM ++GV P+                                   +V F
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            S+I+  CK G +  A  ++   V   L PD VV+  L+DG    G M++ LR++  M+ 
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+V    +L++G  K GRI   L+ F E   K       P+ +LY  II  L   G
Sbjct: 565 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG----IKPSTILYNIIIDGLFEAG 620

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  + CTY+ +LRGL + +   + + L  ++  M +  D +   
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680

Query: 548 VMVRGYQENGDLKSA 562
            M+ G  +   ++ A
Sbjct: 681 TMIAGMFQTRRVEEA 695



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 257/512 (50%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVV    L+   C  G + +A ++FD M  KG  P V  YTI+++G   +  +
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P++YT+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 378 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + Y+CLI G C  G+L +A  L SE+    +
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  +  +I  LC +G++  A+ +       G+  + V YN L+DGYC  G MEKAL 
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPNVV + +L++G CK G ID  + L+ EM+ K + P  +++  +IDGL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I  +  T S ++ GLFKN                       
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN----------------------- 654

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ D  T  TM+ G+ + +R+ +   L
Sbjct: 655 ------------RCFDEAIF----LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + + G+VP AV   +M+    + G ++ A
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEA 730



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 234/510 (45%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y IL+  LCN+ K  +A+ + R M E G V  P++  YN ++DG+ K 
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKE 234

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P++VT+  ++  LCK   +  A  F   M   GV P+ + Y
Sbjct: 235 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTY 294

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE-------- 314
           N LI G+   G   EA+ +  EM +  I PDV   N L+  LC  G+++ A         
Sbjct: 295 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM 354

Query: 315 ---------------------------GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                                       L   M  +GI  ++ T+N LI  Y   G ++K
Sbjct: 355 KGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 414

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + +VPD   +  LI 
Sbjct: 415 AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQ 474

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +    S+I+ L K GR+ +A N F    D T   
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF----DLTVNV 530

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V+Y  ++   C  G++ KA ++F  M S  + P+   Y T++ G  +  R+ + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  E G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 188/377 (49%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  +  + + L+ G C+A    EA+
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+YNIL+K LC  G+   A+ LL+ M + G +   +VV YN++I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  +  +M ++G+ P++VT+SS++   CKA  +D A     +MV K ++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   +  LI G S  G  KE +R++KEM    I P V  +++L+  L K G+I  A + 
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P+   +  +I+A   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++P   TY T++  L R  +M D M     MI  G+VPD   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 469 YHCLIQGFCTHGSLLKA 485



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 190/361 (52%), Gaps = 3/361 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ LI A++  G +++A+ ++ ++    V P +     ++  L + GK D   E + +M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+V D   Y  LI   C  G ++KA  L  E+++ G+   +V +  +I+ LC   ++
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           ++A+++F      G+ P+   YN LMDGYC V  + +AL  +  M+   ++PNVV +G L
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +    + F  M + G+ P+  +YN +IDG  +AG    A     EM +  I
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           + +  TY+I+++GL      + A  L +++    +  +++T N++I G  +   +E+A  
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + ++  G+ P  VT+S +I    K G ++ A  +++ M      PD  +   ++  L 
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 411 K 411
           K
Sbjct: 758 K 758



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  D ++ + L+ G  +     E L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ + L+  L   G+   A +    +     G  CSP+ V Y  
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLL--RMMAEGGTVCSPDVVAYNT 226

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY++++  L +A+ M      L  M+  G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++PD      ++ GY   G  K A R  + ++   I
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFY 107
           N   +S ++    +    +EA+++++++  +     I   N ++ G+ +  + +   + +
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +   GLV   VTY ++I     +G V +A ++F  M + G EP   +   ++  L  +
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759

Query: 168 NKMVEAESMFRSMRE 182
           N++V A +    + E
Sbjct: 760 NEIVRAGAYLSKIDE 774


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 264/516 (51%), Gaps = 12/516 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFYE 108
            F+++I A  + G++ EAL +  K +++   ++ N     +L+ G   +G   S      
Sbjct: 230 TFTSVITACVKEGNVAEALRL--KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 287

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E+   GLV + VTY VLID CC  G++ KA   + EM  KGI  +V     ++ G     
Sbjct: 288 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 347

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
               A +MF    E G+  N++T+N L+   CK   +N A   + E++   + PNVV++ 
Sbjct: 348 SWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G C+   + AA   +  M   G  PN   +  L+DG+ K G++  A S+   M+  
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I P   T  I+IKGLC  G+      L  K   +G +   + YN++IDG+ KEG++  A
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            +V  +M E G+ P+ VT++SLIDG CK  NID A+ L  +M  K L  D+  +  LIDG
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 586

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K  +MK    L  E+  A ++P+ F  +S+I G      +  A++ + +  +  +G  
Sbjct: 587 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN--EGIP 644

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C      Y ++I  L   G++L AS + ++M S  + PD+  +T ++ GL    +  +  
Sbjct: 645 CDLK--TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +L DM    ++P  +I   ++ G+ + G+L+ AFR
Sbjct: 703 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 244/474 (51%), Gaps = 8/474 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI    + G+IE+A   Y +++   +  ++ + N++L G +K   + + +  +
Sbjct: 297 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 356

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            + +  GL A+V T+  L+   C +G + +A NL+DE+I KGI P VV Y  +I G C +
Sbjct: 357 NDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK 415

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           + +  A  +++ M + G  PN  T+  LMDGY K  D+  A   +H M   N+ P   T 
Sbjct: 416 DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 475

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G+++ GLCK G      + F      G  P    YN +IDG  K GN+  A ++  EM +
Sbjct: 476 GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE 535

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P   TY  LI G C    ++ A  LL  M ++G+  ++  Y +LIDG+CK  DM+ 
Sbjct: 536 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 595

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + +++   G+ PN   ++S+I G     N++ A+ LY +MV + +  D+  +T+LID
Sbjct: 596 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 655

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K G +     ++ EML   I P     + LI+GL   G+  NA        +  +G 
Sbjct: 656 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL----EDMNGK 711

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
              P+ ++Y  +I     +G + +A +L  +M    L PDN TY  ++ G  + 
Sbjct: 712 NMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 765



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 234/459 (50%), Gaps = 7/459 (1%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           FY     K  +++   +  + E  LK +   +  +++FN  ++LE    N   F+TL+  
Sbjct: 320 FYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNA-FTMFN--DALESGLANVFTFNTLLSW 376

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
             + G + EA  ++ ++    + P + + N ++ G  +K   ++  + Y+EM+  G   +
Sbjct: 377 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 436

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
            VT+ +L+D    +GD+  A ++F  M D  I PT     I+I GLC   +  E   +F 
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 496

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
                G VP    YN ++DG+ K  ++N A   Y EM    + P+ VT+  L+DG CK  
Sbjct: 497 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 556

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A      M + G+  +I  Y  LIDG CK  ++  A  L +E+    +SP+ F YN
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 616

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            +I G   +  +E A  L +KM  EGI  ++ TY SLIDG  K G +  A  + ++M  K
Sbjct: 617 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 676

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+    + LI+G C  G  + A  +  +M  K+++P V+++  LI G  K+GN++E 
Sbjct: 677 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 736

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNF 456
            RL+ EML+  + P   T   L++G FK +G  S  L F
Sbjct: 737 FRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 775



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +G++++A   F +   +G+E     Y+I +H LC +     A S+ R MR  G +P   T
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGT 230

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           + +++    K  +V  AL    +M++     N+     LM G C  G LR+A      ++
Sbjct: 231 FTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS 290

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G+ PN   Y+ LIDG CK GN+ +A    SEM+   I   V++ N +++G       +
Sbjct: 291 ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ 350

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +     + G LANV T+N+L+   CKEG M +A ++  ++  KG+ PNVV+++++I
Sbjct: 351 NAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G C+  NI+AA  +Y EM+     P+ V FT L+DG  K G+++    ++  M +A I 
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 469

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T+  +I GL K GR     + F +   +     C P    Y  II     +G I  
Sbjct: 470 PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP----YNTIIDGFIKEGNINL 525

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           AS ++ +M    + P   TYT+++ G  +   +   + LL DM + G+  D      ++ 
Sbjct: 526 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585

Query: 552 GYQENGDLKSAFRCSEFLKESR 573
           G+ +  D+KSA    E L E R
Sbjct: 586 GFCKRRDMKSAH---ELLNELR 604



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 236/538 (43%), Gaps = 65/538 (12%)

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           I++G      + + +    G+  D   Y + +   C + +   AL+L  EM   G  P  
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             +T +I     E  + EA  +   M  CG   NL    +LM GYC   ++  AL   +E
Sbjct: 229 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV------------------- 255
           +    L PN VT+ VL+DG CK G +  A  F+  M   G+                   
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348

Query: 256 ---------------FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
                            N+F +N L+   CK G + EA +L  E+    ISP+V +YN +
Sbjct: 349 WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G C    +  A  + ++M   G   N VT+  L+DGY K+GD+E A S+  +M +  +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P   T   +I G CKAG       L+ + V +  VP  + +  +IDG  K+GN+     
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTD--------GGYC 469
           +Y+EM E  ITPS  T +SLI G  K   I  A   LN    K  K D         G+C
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 470 --------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
                               SPN  +Y ++I        + +A  L+  M ++ +  D  
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           TYT+++ GLL++ R+L    +  +M+  GI+PD   + V++ G    G  ++A +  E
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 7/319 (2%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +YN  +D   + GN+ EA     + +   +  D   Y+I +  LC       A  LL++M
Sbjct: 162 LYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 219

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G +    T+ S+I    KEG++ +AL +   M   G   N+   +SL+ G C  GN+
Sbjct: 220 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 279

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            +A+ L  E+    LVP+ V ++ LIDG  K+GN+++    Y EM    I  SV++++S+
Sbjct: 280 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 339

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G  K     NA   F    D  + G    N   +  ++  LC +G++ +A  L+ ++ 
Sbjct: 340 LEGYLKCQSWQNAFTMF---NDALESGL--ANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  + P+  +Y  ++ G  R   +     +  +M+  G  P+AV   +++ GY + GD++
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 561 SAFRCSEFLKESRIGSSET 579
           +AF     +K++ I  ++T
Sbjct: 455 NAFSIFHRMKDANILPTDT 473



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 17/345 (4%)

Query: 225 VTFGVLMDGLCKV------------GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           V F  LMD L +             G +  A   F+     GV  +   Y+  +   C  
Sbjct: 147 VRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLK 206

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
            N   A+SL  EM      P   T+  +I      G +  A  L   M   G   N+   
Sbjct: 207 PNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVA 266

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            SL+ GYC +G++  AL + ++++E G+ PN VT+S LIDG CK GNI+ A   Y+EM  
Sbjct: 267 TSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 326

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K +   V    ++++G  K  + +    ++ + LE+ +  +VFT ++L+  L K G+++ 
Sbjct: 327 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNE 385

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A N + E   K      SPN V Y  II   C    I  A K++ +M  +   P+  T+T
Sbjct: 386 ACNLWDEVIAKG----ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 441

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            ++ G  +   + +   +   M    I+P      ++++G  + G
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 254/492 (51%), Gaps = 7/492 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI  F     +  AL V  K+  L   P I   ++LLNG     +        ++M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +     + VT+  LI          +A+ L D M+ +G +P +  Y  +++GLC    + 
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A S+ + M +  +  ++  Y  ++D  C   +VN AL  + EM +  ++PNVVT+  L+
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LC  G    A      M +  + PN+  ++ LID   K G L EA  L  EM K  I 
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+FTY+ LI G C   +L+ A+ + + M  +    NVVTYN+LI G+CK   +E+ + +
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M+++G+  N VT+++LI G  +AG+ D A  ++ +MV   + PD++ ++ L+DGL K
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +++ L +++ + ++K+ P ++T + +I G+ K G++ +  + F   + K       P
Sbjct: 462 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----VKP 517

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N ++Y  +I   C  G   +A  LF +M+ D   P++ TY T++R  LR         L+
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 577

Query: 532 ADMIKMGIVPDA 543
            +M   G V DA
Sbjct: 578 KEMRSCGFVGDA 589



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 254/477 (53%), Gaps = 4/477 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   N LL+ + K  KFD V    E M    +  D+ +Y +LI+C C +  +  AL 
Sbjct: 61  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 120

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M+  G EP +V  + L++G C+  ++ EA ++   M      PN  T+N L+ G  
Sbjct: 121 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 180

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A+     M+    QP++ T+G +++GLCK G++  A +    M K  +  ++ 
Sbjct: 181 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 240

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y  +ID  C   N+ +A++L +EM+   I P+V TYN LI+ LC  G+   A  LL  M
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            +  I  NVVT+++LID + KEG + +A  +  +M ++ ++P++ T+SSLI+G C    +
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 360

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  ++  M+ K   P+VV +  LI G  K   ++E + L++EM +  +  +  T ++L
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+ G    A   F  K   +DG    P+ + Y+ ++  LC  G++ KA  +F  ++
Sbjct: 421 IQGLFQAGDCDMAQKIF--KKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              + PD  TY  M+ G+ +A ++ D   L   +   G+ P+ +I   M+ G+   G
Sbjct: 477 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 533



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 216/401 (53%), Gaps = 3/401 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI          EA+ +  ++      P +     ++NGL K+G  D      
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M    + ADVV Y  +ID  C   +V  ALNLF EM +KGI P VV Y  LI  LCN 
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 287

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  +A  +   M E  + PN+ T++AL+D + K   +  A + Y EM+  ++ P++ T+
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++G C    L  A + F  M     FPN+  YN LI G CKA  + E M L  EM +
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 407

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  +  TYN LI+GL   G  + A+ + +KM  +G+  +++TY+ L+DG CK G +EK
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL V   + +  +EP++ T++ +I+G CKAG ++    L+  + +K + P+V+++T +I 
Sbjct: 468 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 527

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G  + G  +E   L++EM E    P+  T ++LI    ++G
Sbjct: 528 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 568



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 234/457 (51%), Gaps = 9/457 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           + P +   S+L+  +     I EA+ +  ++ V+   P     N L++GL    K     
Sbjct: 130 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 189

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              + MV  G   D+ TYG +++  C +GD+  AL+L  +M    IE  VVIYT +I  L
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           CN   + +A ++F  M   G+ PN+ TYN+L+   C     + A     +M+   + PNV
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+D   K G+L  A   +  M K  + P+IF Y+ LI+G C    L EA  +   
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +  P+V TYN LIKG C   ++E    L ++M + G++ N VTYN+LI G  + GD
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A  +  +M   GV P+++T+S L+DG CK G ++ A+ ++  +    + PD+  +  
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G+ K G +++   L+  +    + P+V   +++I G  + G    A   F E   K 
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KE 547

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           DG    PN   Y  +I+A   DG    +++L  +MRS
Sbjct: 548 DGTL--PNSGTYNTLIRARLRDGDKAASAELIKEMRS 582



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF EM+     P++V +  L+  +   NK     S+   M+   +  +LY+YN L++
Sbjct: 48  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + +  AL    +M+    +P++VT   L++G C    +  A      M      P
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           N   +N LI G   H KA    EA++L   M      PD+FTY  ++ GLC  G ++ A 
Sbjct: 168 NTVTFNTLIHGLFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL+KM K  I A+VV Y ++ID  C   ++  AL++ ++M  KG+ PNVVT++SLI   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + P+VV F+ALID   K+G + E  +LY EM++  I P +
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT SSLI+G   + R+  A + F     K     C PN V Y  +I+  C   ++ +  +
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVEEGME 400

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TY T+++GL +A        +   M+  G+ PD +   +++ G  
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 460

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G L+ A    E+L++S++
Sbjct: 461 KYGKLEKALVVFEYLQKSKM 480



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 232/474 (48%), Gaps = 6/474 (1%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K D   + + EMV    +  +V +  L+            ++L + M +  I   +  Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI+  C  +++  A ++   M + G  P++ T ++L++GYC    ++ A+    +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             QPN VTF  L+ GL    +   A      M   G  P++F Y  +++G CK G++  A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +SL  +MEK +I  DV  Y  +I  LC    +  A  L  +M  +GI  NVVTYNSLI  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C  G    A  + S M E+ + PNVVTFS+LID   K G +  A  LY EM+ +S+ PD
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +++LI+G      + E   +++ M+     P+V T ++LI G  K  R+   +  F 
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E + +   G    N V Y  +IQ L   G    A K+F  M SD + PD  TY+ +L GL
Sbjct: 404 EMSQRGLVG----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLK 570
            +  ++   +++   + K  + PD     +M+ G  + G ++  +   CS  LK
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           D  + + + L+ EM++++  PS+   + L+  + K     N  +  +   ++      S 
Sbjct: 42  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK----MNKFDLVISLGERMQNLRISY 97

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +   Y  +I   C   Q+  A  +   M      PD  T +++L G    KR+ + + L+
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 157

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
             M  M   P+ V    ++ G
Sbjct: 158 DQMFVMEYQPNTVTFNTLIHG 178


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 240/428 (56%), Gaps = 7/428 (1%)

Query: 59  IIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++A    G ++  L  +R+   ++V   + +   +L+GL K+G  +   +  +E+   G+
Sbjct: 201 LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 260

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
            A+VVTY   I+    + D+     +   M  +G+   VV YT+LIHG  N  K+ EA+ 
Sbjct: 261 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 320

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  MRE G+  ++Y Y +++   C+  +V RAL  + EM    L P+  T+G L+ G+C
Sbjct: 321 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 380

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G++ AA      M   G+  N  ++N LIDG+C++G + EA+ L   MEK  +  DVF
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 440

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN +  GLC + + + A+GLL  M + G+  N +++ +LID YCKEG+  +A  V  +M
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 500

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EKG  PN++T++ LIDG  K GN+  A  L  E+  + L+PDV   T+LI G   DG +
Sbjct: 501 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 560

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              L+L+ EM +  + P+V T +++I GL K+GR   A   +    D+      +P+  +
Sbjct: 561 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY----DEMKETGLTPDDTV 616

Query: 476 YAAIIQAL 483
           Y++++ +L
Sbjct: 617 YSSLVGSL 624



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 234/476 (49%), Gaps = 7/476 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWE 105
           KF    F  L   +++     EAL  +  +E        ++C   L  L + G+ DS   
Sbjct: 156 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 215

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+  MV   +   V +  +++D  C +GDV     L DE+  KG++  VV Y   I G  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 275

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +     +   M + GV  N+ TY  L+ G+  +  +  A   + EM    ++ +V 
Sbjct: 276 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++   C+ G ++ A   F  M   G+ P+   Y  LI G CKAG +  A  L +EM
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +   I  +   +N LI G C  G ++ A  L   M K+G+ ++V  YNS+  G CK    
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +   M E+GV PN ++F++LID  CK GN   A  ++ EM  K  VP+++ +  L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG SK GNMKE  +L  E+    + P V+T +SLIHG   +G++  AL  F E   +  
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG- 574

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                PN V Y A+I  L  DG+  +A KL+ +M+   L PD+  Y++++  L  A
Sbjct: 575 ---LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 230/463 (49%), Gaps = 10/463 (2%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           F    E +E M   G   D  +  V +      G V   L  F  M++  +E TV   TI
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++ GLC    +     +   +   GV  N+ TYNA ++GY K  D+    E    M    
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +  NVVT+ +L+ G   +G++  A   F  M + G+  +++VY  +I  +C++GN+  A+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L  EM    + P   TY  LI G+C  GQ+E A+ L+ +M  +GI  N V +N+LIDGY
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C+ G +++AL +   M +KG+E +V  ++S+  G CK    D A GL   MV + + P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           + FT LID   K+GN  E  R+++EM E    P++ T + LI G  K G +  A      
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL--- 531

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D+ +     P+     ++I   C DG++  A KLF +M    L P+  TYT M+ GL 
Sbjct: 532 -KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 590

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  R  +   L  +M + G+ PD  +   +V      G L SA
Sbjct: 591 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLV------GSLHSA 627



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 212/446 (47%), Gaps = 10/446 (2%)

Query: 137 KALNLFDEMIDKGI---EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           +AL  F+ M  KG    E + ++Y +    L    ++      FR M    V   +Y+  
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLL---ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLT 233

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            ++DG CK  DV    +   E+    ++ NVVT+   ++G  K  +L         M K 
Sbjct: 234 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 293

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV  N+  Y  LI G    G + EA  L  EM +  I  DV+ Y  +I   C  G ++ A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L  +M  +G++ +  TY +LI G CK G ME A  + ++M  KG++ N V F++LIDG
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C++G +D A+ L   M  K L  DV  + ++  GL K     E   L   M+E  ++P+
Sbjct: 414 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 473

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             + ++LI    K G    A   F E  +K +     PN + Y  +I      G + +A 
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGN----VPNIITYNVLIDGYSKRGNMKEAH 529

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KL  ++ +  L PD  T T+++ G     ++   + L  +M + G+VP+ V    M+ G 
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589

Query: 554 QENGDLKSAFRCSEFLKESRIGSSET 579
            ++G  + AF+  + +KE+ +   +T
Sbjct: 590 SKDGRSEEAFKLYDEMKETGLTPDDT 615


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 240/428 (56%), Gaps = 7/428 (1%)

Query: 59  IIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++A    G ++  L  +R+   ++V   + +   +L+GL K+G  +   +  +E+   G+
Sbjct: 197 LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 256

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
            A+VVTY   I+    + D+     +   M  +G+   VV YT+LIHG  N  K+ EA+ 
Sbjct: 257 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 316

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  MRE G+  ++Y Y +++   C+  +V RAL  + EM    L P+  T+G L+ G+C
Sbjct: 317 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 376

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G++ AA      M   G+  N  ++N LIDG+C++G + EA+ L   MEK  +  DVF
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 436

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN +  GLC + + + A+GLL  M + G+  N +++ +LID YCKEG+  +A  V  +M
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 496

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EKG  PN++T++ LIDG  K GN+  A  L  E+  + L+PDV   T+LI G   DG +
Sbjct: 497 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 556

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              L+L+ EM +  + P+V T +++I GL K+GR   A   +    D+      +P+  +
Sbjct: 557 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY----DEMKETGLTPDDTV 612

Query: 476 YAAIIQAL 483
           Y++++ +L
Sbjct: 613 YSSLVGSL 620



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 235/477 (49%), Gaps = 7/477 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           KF    F  L   +++     EAL  +  +E        ++C   L  L + G+ DS   
Sbjct: 152 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 211

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+  MV   +   V +  +++D  C +GDV     L DE+  KG++  VV Y   I G  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 271

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +     +   M + GV  N+ TY  L+ G+  +  +  A   + EM    ++ +V 
Sbjct: 272 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++   C+ G ++ A   F  M   G+ P+   Y  LI G CKAG +  A  L +EM
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +   I  +   +N LI G C  G ++ A  L   M K+G+ ++V  YNS+  G CK    
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +   M E+GV PN ++F++LID  CK GN   A  ++ EM  K  VP+++ +  L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG SK GNMKE  +L  E+    + P V+T +SLIHG   +G++  AL  F E   +  
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG- 570

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                PN V Y A+I  L  DG+  +A KL+ +M+   L PD+  Y++++  L  A+
Sbjct: 571 ---LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 230/463 (49%), Gaps = 10/463 (2%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           F    E +E M   G   D  +  V +      G V   L  F  M++  +E TV   TI
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++ GLC    +     +   +   GV  N+ TYNA ++GY K  D+    E    M    
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +  NVVT+ +L+ G   +G++  A   F  M + G+  +++VY  +I  +C++GN+  A+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L  EM    + P   TY  LI G+C  GQ+E A+ L+ +M  +GI  N V +N+LIDGY
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C+ G +++AL +   M +KG+E +V  ++S+  G CK    D A GL   MV + + P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           + FT LID   K+GN  E  R+++EM E    P++ T + LI G  K G +  A      
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL--- 527

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D+ +     P+     ++I   C DG++  A KLF +M    L P+  TYT M+ GL 
Sbjct: 528 -KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 586

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  R  +   L  +M + G+ PD  +   +V      G L SA
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLV------GSLHSA 623



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 212/446 (47%), Gaps = 10/446 (2%)

Query: 137 KALNLFDEMIDKGI---EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           +AL  F+ M  KG    E + ++Y +    L    ++      FR M    V   +Y+  
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLL---ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLT 229

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            ++DG CK  DV    +   E+    ++ NVVT+   ++G  K  +L         M K 
Sbjct: 230 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 289

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV  N+  Y  LI G    G + EA  L  EM +  I  DV+ Y  +I   C  G ++ A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L  +M  +G++ +  TY +LI G CK G ME A  + ++M  KG++ N V F++LIDG
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C++G +D A+ L   M  K L  DV  + ++  GL K     E   L   M+E  ++P+
Sbjct: 410 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 469

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             + ++LI    K G    A   F E  +K +     PN + Y  +I      G + +A 
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGN----VPNIITYNVLIDGYSKRGNMKEAH 525

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KL  ++ +  L PD  T T+++ G     ++   + L  +M + G+VP+ V    M+ G 
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585

Query: 554 QENGDLKSAFRCSEFLKESRIGSSET 579
            ++G  + AF+  + +KE+ +   +T
Sbjct: 586 SKDGRSEEAFKLYDEMKETGLTPDDT 611


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 258/505 (51%), Gaps = 9/505 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC--NALLNGLIKKGKFDSVWEFYE 108
            ++ ++ A    G ++ AL + R++   E  P   A   N ++ GL + GK     + ++
Sbjct: 159 AWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFD 218

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EMV  G+V + +TY  +ID     GD+     L D+M+  G +P +V Y +L+ GLC   
Sbjct: 219 EMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAG 278

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +M E   +   M    + P+ +TY+ L DG  +  +    L  + E L   +     T  
Sbjct: 279 RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCS 338

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +L++GLCK G++  A      +   G+ P   +YN LI+G+C+  +L  A  +  +M+  
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PD  TYN LI GLC +  +  AE L+ +M K G+  +V T+N+LID Y   G +EK 
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            +V S M +KG++ +V++F S++   CK G I  A+ +  +M+ K + P+  V+ ++ID 
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G+ ++   L ++M  + ++ S+ T + L+ GL ++ +I  A       T +  G  
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY--TLRNQG-- 574

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V Y  II A C  G   KA +L  +M    +RP   TY T++  L  A R+ D+ 
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634

Query: 529 MLLADMIKMGIVPDAVINQVMVRGY 553
            L   M+   + P + I  +MV  Y
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 236/493 (47%), Gaps = 9/493 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++ +CN LL  L+  G+   V   +  +V  G   D   +  ++  C   GD+  AL 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 141 LFDEM--IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           +   M   +    P    Y ++I GL    K  +A  +F  M + GVVPN  TYN ++DG
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K  D+        +MLH   +PN+VT+ VL+ GLC+ G +         MA   +FP+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            F Y+ L DG  + G     +SL +E  K  +    +T +IL+ GLC  G++  AE +L+
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            +   G++   V YN+LI+GYC+  D+  A  +  QM  + + P+ +T+++LI+G CK  
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L  EM    + P V  F  LID     G +++   +  +M +  I   V +  
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++    KNG+I  A+    +   K      +PN  +Y +II A    G   +A  L   
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKD----VAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M++  +     TY  +L+GL R+ ++ +   L+  +   G+ PD V    ++      GD
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 559 LKSAFRCSEFLKE 571
              A    E L+E
Sbjct: 595 TDKAL---ELLQE 604



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 3/381 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    +  G     L ++    K  V+     C+ LLNGL K GK     +  E +
Sbjct: 301 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 360

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C   D+  A  +F++M  + I P  + Y  LI+GLC    +
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMV 420

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M + GV P++ T+N L+D Y     + +      +M    ++ +V++FG +
Sbjct: 421 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 480

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK G++  A      M    V PN  VYN +ID + ++G+  +A  L  +M+   +
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 540

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S  + TYN+L+KGLC   Q++ AE L+  +  +G+  +VV+YN++I   C +GD +KAL 
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G+ P + T+ +L+     AG +     LY +M+ K++ P   ++  ++D   
Sbjct: 601 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 411 KDGNMKETLRLYKEMLEAKIT 431
           +  N  +   L KEM E  I 
Sbjct: 661 RCENDSKVASLKKEMSEKGIA 681


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 260/525 (49%), Gaps = 18/525 (3%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNG 93
           + F++L+ L      P     L+   S    ++EA  +Y   RK   +P+ ++ N LL  
Sbjct: 72  TAFSSLSELHAHVSKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRT 131

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L+    F+     + +++  G   D V YG  +       D+ K   L   M+  G+ P+
Sbjct: 132 LVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPS 191

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           V  Y +++ GLC   ++ +A  +F  M +  +VPN  TYN L+DGYCKV  +  AL F  
Sbjct: 192 VFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKE 251

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M   N++ N+VT+  L++GLC  G +  A    + M   G  P  F+     D    AG
Sbjct: 252 RMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAG 311

Query: 274 N--LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           +  LF+           EI  D  TY IL+ GLC VG++E AE +L K+ + G+  + ++
Sbjct: 312 DDGLFDGK---------EIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS 362

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN L++ YC+EGD++KA+    QM E+G+EPN +TF+++I   C+ G +D A      MV
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K + P V  + +LI+G  + G+         EM +A I P+V +  SLI+ L K+ ++ 
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLI 482

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +A     +      G   SPN  +Y  +I+A C   ++  A + F +M    +     TY
Sbjct: 483 DAEIVLADMI----GRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTY 538

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            T++ GL R  R+     L   M   G  PD +    ++ GY ++
Sbjct: 539 NTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKS 583



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 254/516 (49%), Gaps = 15/516 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + ++G IEEAL    +++   V   +   N+LLNGL   G+ D   E  
Sbjct: 226 NTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVL 285

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G +       V  D   G GD      LFD    K I      Y IL++GLC  
Sbjct: 286 LEMEGSGFLPGGFLSFVFDDHSNGAGDD----GLFD---GKEIRIDERTYCILLNGLCRV 338

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +AE +   + E GV P+  +YN L++ YC+  DV +A+    +M    L+PN +TF
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++   C+ GE+  A  +   M + GV P +  YN LI+G+ + G+         EM+K
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P+V +Y  LI  LC   +L  AE +L  M   G+  N   YN LI+  C    ++ 
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     +M + G++  +VT+++LI+G  + G +  A  L+ +M  K   PDV+ + +LI 
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLIS 578

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G +K  N ++ L LY +M    I P+V T   LI+   K G ++  ++   ++  + D  
Sbjct: 579 GYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT--MDKMFQEMLQMD-- 634

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+  +Y  +I +   DG ++KA  L   M    +  D  TY +++   LR +R+ ++
Sbjct: 635 -LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEI 693

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             L+ DM   G+VP      ++++G  +  D   A+
Sbjct: 694 KHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAY 729



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 207/435 (47%), Gaps = 38/435 (8%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           +E   F P  F + +      G  ++ L+  ++I +         LLNGL + G+ +   
Sbjct: 288 MEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI--LLNGLCRVGRIEKAE 345

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   ++V  G+    ++Y +L++  C +GDV KA+   ++M ++G+EP  + +  +I   
Sbjct: 346 EVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKF 405

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   ++  AE+  R M E GV P + TYN+L++GY +     R  EF  EM    ++PNV
Sbjct: 406 CETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNV 465

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +++G L++ LCK  +L  A      M   GV PN  +YN LI+  C    L +A     E
Sbjct: 466 ISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDE 525

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  I   + TYN LI GL   G+++ AE L  +M  +G   +V+TYNSLI GY K  +
Sbjct: 526 MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVN 585

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA--------------------------- 377
            +K L +  +M   G++P V TF  LI   C+                            
Sbjct: 586 TQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNE 644

Query: 378 --------GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
                   GN+  AM L+ +MV + +  D V + +LI    +D  + E   L  +M    
Sbjct: 645 MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKG 704

Query: 430 ITPSVFTVSSLIHGL 444
           + P V T + LI GL
Sbjct: 705 LVPKVDTYNILIKGL 719



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 205/402 (50%), Gaps = 4/402 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ L+ A+ + G +++A+    ++E   + P     N +++   + G+ D    +   MV
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+   V TY  LI+    +G  ++     DEM   GI+P V+ Y  LI+ LC + K++
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLI 482

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +AE +   M   GV PN   YN L++  C ++ +  A  F+ EM+   +   +VT+  L+
Sbjct: 483 DAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLI 542

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GL + G ++ A + F+ MA  G  P++  YN LI G+ K+ N  + + L  +M+   I 
Sbjct: 543 NGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK 602

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V T++ LI   C    +   + + Q+M +  ++ +   YN +I  Y ++G++ KA+S+
Sbjct: 603 PTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSL 661

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             QM ++GV+ + VT++SLI    +   +     L  +M  K LVP V  +  LI GL  
Sbjct: 662 HQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCD 721

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
             +       Y+EM+E  +  +V     LI GL + G +  A
Sbjct: 722 LKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 222/467 (47%), Gaps = 34/467 (7%)

Query: 164 LCNENKMV-EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           LC+ +KM+ EA  ++ +MR+ G VP+  + N L+          + L  + +++    +P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           + V +G  +     + +L         M K G+ P++F YN ++ G CK   + +A  L 
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM +  + P+  TYN LI G C VG +E A G  ++M ++ +  N+VTYNSL++G C  
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 343 GDMEKALSVCSQMTEKGVEP----------------------------NVVTFSSLIDGQ 374
           G ++ A  V  +M   G  P                            +  T+  L++G 
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G I+ A  +  ++V   + P  + +  L++   ++G++K+ +   ++M E  + P+ 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +++I    + G + +A  +     +K      SP    Y ++I      G  ++  +
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKG----VSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
              +M    ++P+  +Y +++  L + ++++D  ++LADMI  G+ P+A I  +++    
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 555 ENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQDL 601
               LK AFR  + + +S I ++    +T  + LG     V K +DL
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGR-NGRVKKAEDL 557



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 183/383 (47%), Gaps = 39/383 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-LWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+T+I  F E G ++ A  WV R +E  V P ++  N+L+NG  +KG F   +EF 
Sbjct: 394 NRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFL 453

Query: 108 EEMVLCGLVADVVTYGVLIDCCC----------------GQG------------------ 133
           +EM   G+  +V++YG LI+C C                G+G                  
Sbjct: 454 DEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL 513

Query: 134 -DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
             +  A   FDEMI  GI+ T+V Y  LI+GL    ++ +AE +F  M   G  P++ TY
Sbjct: 514 SKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITY 573

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N+L+ GY K  +  + LE Y +M    ++P V TF  L+   C+   +      F  M +
Sbjct: 574 NSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQ 632

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             + P+ FVYN +I  + + GN+ +AMSL  +M    +  D  TYN LI       ++  
Sbjct: 633 MDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSE 692

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            + L+  M  +G++  V TYN LI G C   D   A     +M E+G+  NV     LI 
Sbjct: 693 IKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLIS 752

Query: 373 GQCKAGNIDAAMGLYTEMVIKSL 395
           G  + G +  A  + +E+ I  L
Sbjct: 753 GLREEGMLREAQIVSSELSIGGL 775


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/491 (32%), Positives = 258/491 (52%), Gaps = 14/491 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKA 138
           V P  +  N ++NGL K       +E  +EM     VA D+VTY  +I+  C QG++ +A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 139 LNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
             +  EM+ + G+ P VV YT ++ GLC + KM  A  M R M+  GV P+ +T++AL+ 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF--VHMAKFGV 255
           G+C    V+ AL+ Y E+L  + + + V+   L+ GLC+   +  A   F  + M + G 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 256 F-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  Y  LIDG CK+GNL +AM +   ME  +  P+V TY+ L+ GLC  G L+ A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L ++M  +G + NVVTY +LI G C    ++ A  +  +MT      + V++++L+DG 
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM-LEAKITPS 433
           C+ G I+ A  L+ EM  KS +PD + +T L+ G      ++E   L + M   A I P 
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T S ++ G  +  R   A  F  E   +      +PN V Y+++I  LC  G++  A 
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARN----VAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++  ++     +PD  TYT ++ GL    R  + + LL +M+   + P       ++   
Sbjct: 421 EVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 554 QENGDLKSAFR 564
              GD+  A++
Sbjct: 477 CRLGDMDEAWK 487



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 251/503 (49%), Gaps = 13/503 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-GLVADVVTYGVLIDCCCGQGDVMKA 138
           V P +   + ++NG  K+G+ D   E   EMV   G+  DVVTY  ++D  C  G + +A
Sbjct: 41  VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRA 100

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             +  EM  KG+EP    ++ LI G CN  K+ EA  +++ +       +  + +AL+ G
Sbjct: 101 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITG 160

Query: 199 YCKVADVNRALEFYHEMLHHN---LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            C+   +  A E + EM        +P+VVT+  L+DG CK G L  A      M     
Sbjct: 161 LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC 220

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y+ L+ G CKAG+L +A+ L   M      P+V TY  LI GLC   +++ A  
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ +M      A+ V+YN+L+DGYC+ G +E+A  +  +M  K   P+ +T++ L+ G C
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340

Query: 376 KAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            A  ++ A  L   M   + + PDVV ++ ++ G S+     E     +EM+   + P+ 
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T SSLI GL K GR+++A+   L+  DK       P+ V Y  +I+ LC   +  +A  
Sbjct: 401 VTYSSLIDGLCKAGRVNHAME-VLKNVDK-------PDVVTYTIVIEGLCGTDRTEEALT 452

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M +  + P   T+ +++  L R   M +   LL  M   G+ P  V    ++ G+ 
Sbjct: 453 LLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFS 512

Query: 555 ENGDLKSAFRCSEFLKESRIGSS 577
             G ++ A+   E ++     SS
Sbjct: 513 RTGRMEIAYELFEVMRRKAKKSS 535



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/531 (31%), Positives = 257/531 (48%), Gaps = 20/531 (3%)

Query: 21  VTENLLKSRKPHHVCYSVFN-ALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           V + L +  K    C  V    L  +E  KF    FS LI  +     ++EAL +Y++I 
Sbjct: 87  VVDGLCRDGKMDRACEMVREMKLKGVEPDKFT---FSALITGWCNARKVDEALKLYKEIL 143

Query: 80  V----LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQ 132
                L A+ + +AL+ GL ++ +    +E ++EM +        DVVTY  LID  C  
Sbjct: 144 TSSCRLDAVSS-SALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKS 202

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G++ KA+ +   M  +   P VV Y+ L+HGLC    + +A  +FR M   G VPN+ TY
Sbjct: 203 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 262

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+ G C    V+ A     EM       + V++  L+DG C++G +  A   F  MA 
Sbjct: 263 TTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAA 322

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLE 311
               P+   Y CL+ G C A  L EA  L   M+    I PDV TY+I++ G     +  
Sbjct: 323 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 382

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A   +Q+M    +  N VTY+SLIDG CK G +  A+ V   +     +P+VVT++ +I
Sbjct: 383 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVI 438

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C     + A+ L  EMV K + P V  F ++I  L + G+M E  +L   M    + 
Sbjct: 439 EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV---LYAAIIQALCYDGQ 488
           P + T ++L+ G  + GR+  A   F     K      + N V    ++A+I+ LC   +
Sbjct: 499 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKARE 558

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I KA  +  ++RS    P       ++ GLLRA R  +   L+  + K+G+
Sbjct: 559 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 215/398 (54%), Gaps = 14/398 (3%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVG 238
           MRE  V PN  TYN +++G CK    ++A E   EM    ++ P++VT+  +++G CK G
Sbjct: 1   MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59

Query: 239 ELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           E+  A      M  + G+ P++  Y  ++DG C+ G +  A  +  EM+   + PD FT+
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS--QM 355
           + LI G C   +++ A  L +++       + V+ ++LI G C+E  + +A  +    +M
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179

Query: 356 TEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
            E G  +P+VVT+++LIDG CK+GN++ AM +   M  +  VP+VV +++L+ GL K G+
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + + L L++ M      P+V T ++LIHGL    ++  A        D+     C  + V
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM----DEMTATCCPADTV 295

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y A++   C  G+I +A +LF +M + +  PD  TYT ++RG   A R+ +   LL +M
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355

Query: 535 -IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
               GI PD V   ++V GY      K     +EF++E
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRA---KRFVEAAEFIQE 390


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/410 (35%), Positives = 227/410 (55%), Gaps = 11/410 (2%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
           L +   NP     L+    ++G I +  +VY+++    + P + + N ++NGL K GK +
Sbjct: 126 LSVTSCNP-----LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV---MKALNLFDEMIDKGIEPTVVIYT 158
              +  E+M + G+ A+V+TY  LID  C  G +    KA  +  EM   GI P  V + 
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFN 240

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI G C +  +  A  +F  M   GV PN+ TYN+L++G C    VN A     +M++ 
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+PN++T   L++G CK   ++ AG  F  M K G+ PN+  YN LID +CK  N+ +A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            +L   M    + PDV TYN LI GLC  G LE A  L+ +M  + + A+++TYN LID 
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C +G+M+KAL +  +M  KG++P+ +T++++IDG CK GN+ AA+ L ++M     + +
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           V  +  LI G  K   +++   L  EMLE  + P+  T   +   + + G
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/444 (34%), Positives = 229/444 (51%), Gaps = 27/444 (6%)

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +E ++     GL   V +   L+      G++     ++ EMI + IEPT++ + I+I+G
Sbjct: 113 FEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVING 172

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN---RALEFYHEMLHHNL 220
           LC   K+ +A  +   M+  GV  N+ TYN L+DGYCK+  +    +A     EM    +
Sbjct: 173 LCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGI 232

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PN VTF +L+DG CK   + AA   F  M + GV PN+  YN LI+G C  G + EA +
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  +M    + P++ T+N L+ G C    ++ A  L   M K+GI  NV TYN LID YC
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC 352

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K+ +ME A ++   M  KGV P+V T++ LI G C+ G+++AA  L +EM  K L  D++
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLI 412

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--L 458
            +  LID L   G MK+ LRL  EM    + PS  T +++I G  K G +  ALN    +
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           EK  +        N   Y  +I+  C   ++  A+ L ++M    L P+  TY       
Sbjct: 473 EKVGRL------ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE------ 520

Query: 519 LRAKRMLDVMMLLADMIKMGIVPD 542
                     ++  +M++ G VPD
Sbjct: 521 ----------IVTEEMMEKGFVPD 534



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 210/389 (53%), Gaps = 7/389 (1%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F+   + G+  ++ + N LM G  KV ++      Y EM+   ++P +++F ++++GLCK
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA---GNLFEAMSLCSEMEKFEISPD 293
           VG+L  AG+    M   GV  N+  YN LIDG+CK    G +++A ++  EM    I P+
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T+NILI G C    +  A  +  +M ++G+  NVVTYNSLI+G C  G + +A ++  
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRD 295

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM    ++PN++T ++L++G CK   +  A  L+ +M  + + P+V  +  LID   KD 
Sbjct: 296 QMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDE 355

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           NM++   LY+ ML   + P V T + LI GL + G +  A N   E     D  +   + 
Sbjct: 356 NMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSE----MDTKHLKADL 411

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  +I +LC  G++ KA +L  +M    L+P   TY TM+ G  +   +   + L + 
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           M K+G + +     V+++G+ +   L+ A
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDA 500



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 214/419 (51%), Gaps = 7/419 (1%)

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F    D G++ +V     L+ GL    ++ + E +++ M    + P L ++N +++G CK
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRAAGNFFVHMAKFGVFPN 258
           V  +N+A +   +M    +  NV+T+  L+DG C   K+G++  A      M   G+ PN
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              +N LIDG CK  N+  AM + +EM +  + P+V TYN LI GLC  G++  A  L  
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRD 295

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M    +  N++T+N+L++G+CK   +++A  +   M ++G+ PNV T++ LID  CK  
Sbjct: 296 QMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDE 355

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           N++ A  LY  M+ K + PDV  +  LI GL + G+++    L  EM    +   + T +
Sbjct: 356 NMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYN 415

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI  L   G +  AL    E   K       P+ + Y  +I   C +G +  A  L S 
Sbjct: 416 ILIDSLCNKGEMKKALRLLDEMCRKG----LKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           M       +  TY  +++G  +  ++ D   LL +M++ G++P+ +  +++     E G
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/356 (33%), Positives = 184/356 (51%), Gaps = 24/356 (6%)

Query: 51  NPSVFSTLIIAFSEMGHI------EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           N   ++TLI  + +MG I      +  L   R   + P     N L++G  K     +  
Sbjct: 197 NVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAM 256

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + EM   G+  +VVTY  LI+  C  G V +A  L D+M++  ++P ++ +  L++G 
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316

Query: 165 CNENKMV-EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           C +NKMV +A  +F  M + G+ PN+ TYN L+D YCK  ++  A   Y  ML   + P+
Sbjct: 317 C-KNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD 375

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+  L+ GLC+ G+L AA N    M    +  ++  YN LID  C  G + +A+ L  
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +  + P   TYN +I G C  G L  A  L  +M K G LANV TYN LI G+CK+ 
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            +E A  + ++M EKG+ PN +T+  + +                EM+ K  VPD+
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEIVTE----------------EMMEKGFVPDI 535



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 207/397 (52%), Gaps = 8/397 (2%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y K        E +     + L+ +V +   LM GL KVGE+      +  M +  
Sbjct: 99  LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLE 311
           + P +  +N +I+G CK G L +A  +  +M+   +S +V TYN LI G C    +G++ 
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ +L++M  +GI  N VT+N LIDG+CK+ ++  A+ V ++M  +GV+PNVVT++SLI
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C  G ++ A  L  +MV   L P+++   AL++G  K+  +K+   L+ +M +  IT
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V T + LI    K+  + +A   +     K   G C P+   Y  +I  LC  G +  
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGK---GVC-PDVSTYNCLIAGLCRKGDLEA 394

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L S+M + +L+ D  TY  ++  L     M   + LL +M + G+ P  +    M+ 
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454

Query: 552 GYQENGDLKSAFRC-SEFLKESRIGSSETEGHTTRSF 587
           GY + G+L++A    S+  K  R+ +  T     + F
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGF 491



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 112/236 (47%), Gaps = 1/236 (0%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           AN +  + L+  Y K            + ++ G++ +V + + L+ G  K G I     +
Sbjct: 91  ANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFV 150

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           Y EM+ + + P ++ F  +I+GL K G + +   + ++M    ++ +V T ++LI G  K
Sbjct: 151 YKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G+I           +    G C PN V +  +I   C D  +  A K+F++M    ++P
Sbjct: 211 MGKIGKMYKADAILKEMRADGIC-PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  TY +++ GL    ++ +   L   M+   + P+ + +  ++ G+ +N  +K A
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 262/512 (51%), Gaps = 12/512 (2%)

Query: 66  GH-IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           GH +E+ ++ Y+     P +   +     L++ G  D   + +++M+  GL+  V +  +
Sbjct: 165 GHFVEQLIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNL 222

Query: 125 LIDCCCGQGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            I       D +K AL +F E  + G+      Y I+ H LC   ++VEA  +   M   
Sbjct: 223 FISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR 282

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G +P++ +Y+ +++GYC+V ++ R L+   EM    L+PN  T+  ++  LCK G++  A
Sbjct: 283 GCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEA 342

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M   G+ P+  +Y  LIDG CK GN+  A  L  EM+K +ISPD  TY  +I G
Sbjct: 343 ERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICG 402

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G++  A+ L  +M  + +  + VTY +LIDGYCKEG M++A S+ +QM + G+ PN
Sbjct: 403 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           +VT+++L DG CK G +D A  L  EM  K L  ++  + +L++GL K GN+ + ++L K
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 522

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M  A   P   T ++L+    K+  +  A     +  D+       P  V +  ++   
Sbjct: 523 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE----LQPTVVTFNVLMNGF 578

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G +    KL   M    + P+  TY ++++       M     +   M   G+VPD 
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
               ++++G+ +  ++K A+    FL    +G
Sbjct: 639 NTYNILIKGHCKARNMKEAW----FLHRDMVG 666



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 259/511 (50%), Gaps = 19/511 (3%)

Query: 81  LPAIQAC------NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
            P +  C      N + + L + G+     +   +M L G + DV++Y  +I+  C  G+
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + + L L +EM  KG++P    Y  +I  LC   K+ EAE + R M   G+ P+   Y  
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+DG+CK+ +V+ A   + EM    + P+ +T+  ++ GLC+ G +  A   F  M    
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+   Y  LIDG+CK G + EA SL ++M +  ++P++ TY  L  GLC  G+++ A 
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M ++G+  N+ TYNSL++G CK G++++A+ +   M   G  P+ VT+++L+D  
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+  +  A  L  +M+ + L P VV F  L++G    G +++  +L K MLE  I P+ 
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAAIIQALCYDGQIL 490
            T +SLI    K   I N     +  T +   G C+    P+   Y  +I+  C    + 
Sbjct: 604 TTYNSLI----KQYCIRNN----MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  L  DM          +Y  +++G  + K+ L+   L   M + G+V D  I  +  
Sbjct: 656 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFA 715

Query: 551 RGYQENGDLKSAFR-CSEFLKESRIGSSETE 580
               + G ++     C E +++  +G  +T+
Sbjct: 716 DINYDEGKMELTLELCDEAIEKCLVGDIQTK 746



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/406 (34%), Positives = 213/406 (52%), Gaps = 3/406 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +ST+I  + ++G ++  L +  ++++    P     N ++  L K GK         EM+
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D V Y  LID  C  G+V  A  LFDEM  + I P  + YT +I GLC   +++
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +F  M    + P+  TY AL+DGYCK   +  A   +++ML   L PN+VT+  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK GE+  A      M + G+  NI+ YN L++G CKAGN+ +A+ L  +ME     
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY  L+   C   ++  A  LL++M    +   VVT+N L++G+C  G +E    +
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M EKG+ PN  T++SLI   C   N+ A   +Y  M  K +VPD   +  LI G  K
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
             NMKE   L+++M+      +V + ++LI G +K  +   A   F
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/380 (36%), Positives = 197/380 (51%), Gaps = 3/380 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K NP  ++ +I+   + G + EA  V R++    + P       L++G  K G   S + 
Sbjct: 320 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 379

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM    +  D +TY  +I   C  G VM+A  LF EM+ K +EP  V YT LI G C
Sbjct: 380 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 439

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E KM EA S+   M + G+ PN+ TY AL DG CK  +V+ A E  HEM    L+ N+ 
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G +  A      M   G  P+   Y  L+D +CK+  +  A  L  +M
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              E+ P V T+N+L+ G C  G LE  E LL+ M ++GI+ N  TYNSLI  YC   +M
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                +   M  KGV P+  T++ LI G CKA N+  A  L+ +MV K     V  + AL
Sbjct: 620 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679

Query: 406 IDGLSKDGNMKETLRLYKEM 425
           I G  K     E   L+++M
Sbjct: 680 IKGFYKRKKFLEARELFEQM 699



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 243/465 (52%), Gaps = 7/465 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEF 106
           +N + ++ +  +  ++G + EA  +  ++E+   +P + + + ++NG  + G+   V + 
Sbjct: 251 WNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EEM + GL  +  TY  +I   C  G V +A  +  EMI +GI P  VIYT LI G C 
Sbjct: 311 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A  +F  M++  + P+  TY A++ G C+   V  A + +HEM+   L+P+ VT
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG CK G+++ A +    M + G+ PNI  Y  L DG CK G +  A  L  EM 
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +  +++TYN L+ GLC  G ++ A  L++ M   G   + VTY +L+D YCK  +M 
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 550

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  QM ++ ++P VVTF+ L++G C +G ++    L   M+ K ++P+   + +LI
Sbjct: 551 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 610

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                  NM+ T  +Y+ M    + P   T + LI G  K   +  A  +FL + D    
Sbjct: 611 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA--WFLHR-DMVGK 667

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           G+ +     Y A+I+      + L+A +LF  MR + L  D   Y
Sbjct: 668 GF-NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 192/377 (50%), Gaps = 3/377 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++TLI  F ++G++  A  ++   +K ++ P      A++ GL + G+     + + EM
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V   L  D VTY  LID  C +G + +A +L ++M+  G+ P +V YT L  GLC   ++
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G+  N+YTYN+L++G CK  ++++A++   +M      P+ VT+  L
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           MD  CK  E+  A      M    + P +  +N L++G C +G L +   L   M +  I
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TYN LIK  C    +     + + M  +G++ +  TYN LI G+CK  +M++A  
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M  KG    V ++++LI G  K      A  L+ +M  + LV D  ++    D   
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINY 719

Query: 411 KDGNMKETLRLYKEMLE 427
            +G M+ TL L  E +E
Sbjct: 720 DEGKMELTLELCDEAIE 736


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 251/495 (50%), Gaps = 11/495 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+T+I    + G ++EA+ V+ KI   ++ P      +L+ G  +  K D  +E ++ M
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   + VTY  LI+  C +G + +A+++ +EM +KGIEPTV  YT+ I  LC+  ++
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A ++ RSM + G  P++ TY A++ G  +   +  A+  YH+ML   L PN VT+  L
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC  G    A   F  M   G   N   YN +I G     ++ +AM + ++M K   
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP V TYN LI      G L  A   L  M +     +  TY  LI G+CK G ++ A S
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M + G+ PN  T++++IDG CK G ID A+ L+  M        +  + A+I GLS
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K     E  +   +M E  + P+  T +SLI+GL KN   + A   F E   K     C 
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN----CL 614

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y ++I  LC +G++  A +L      +   P   TY+T++ GL R  R  +   L
Sbjct: 615 PNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQL 670

Query: 531 LADMIKMGIVPDAVI 545
           + +M + G+ P   I
Sbjct: 671 VENMKEKGLSPSMEI 685



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/526 (31%), Positives = 250/526 (47%), Gaps = 11/526 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+TL++   +   +  A  VY +I    V P++   N ++N L KKGK       + ++ 
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              L  D  TY  LI   C    + KA  +FD M+  G  P  V Y+ LI+GLCNE ++ 
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  M   M E G+ P +YTY   +   C +  V+ A+     M      P+V T+  ++
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL + G++  A   +  M K G+ PN   YN LI+  C  G    A+ +   ME     
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            +  TYN +IKGL G+  +E A  +  KM K+G    VVTYN+LI    K G +  A   
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M E   EP+  T+  LI G CK G +D+A   + EM+   + P+   +TA+IDG  K
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G +   L L++ M E   + S+ T +++I GL K  R S A  F  + T++       P
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG----LQP 580

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + Y ++I  LC +     A K+F +M   N  P+  TYT+++ GL +  ++     L 
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLT 640

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            +    G  P       +V G    G    A +  E +KE  +  S
Sbjct: 641 EN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPS 682



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 240/474 (50%), Gaps = 13/474 (2%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V++    I +  ++G +++A+ + R   K    P++Q   A+++GL + GK +     
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGM 359

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y +M+  GLV + VTY  LI+  C +G    AL +FD M   G       Y  +I GL  
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            + + +A  +F  M + G  P + TYN L+    K   +N A  F + M   N +P+  T
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G CK G+L +A +FF  M K G+ PN + Y  +IDG+CK G +  A+SL   ME
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +   S  + TYN +I GL    +   AE    KM ++G+  N +TY SLI+G CK     
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +M +K   PN  T++SLI G C+ G +DAA  L TE       P +  ++ L+
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL-TE---NGCEPTIDTYSTLV 655

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL ++G   E  +L + M E  ++PS+    SL+    K+ ++  AL  F     K   
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK--- 712

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           G+  P+  +Y  +I ALC   +  +A  +F  +       D   +T ++ GLL+
Sbjct: 713 GF-QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 228/494 (46%), Gaps = 48/494 (9%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +PSV  ++ +I      G +E A+ +Y K+    ++P     NAL+N L  +G+F    +
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALK 393

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI---- 161
            ++ M   G +A+  TY  +I    G  D+ KA+ +F++M+  G  PTVV Y  LI    
Sbjct: 394 IFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453

Query: 162 -------------------------------HGLCNENKMVEAESMFRSMRECGVVPNLY 190
                                           G C   K+  A S F  M +CG+ PN +
Sbjct: 454 KRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQW 513

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY A++DGYCK   ++ AL  +  M  +    ++ T+  ++ GL K      A  F   M
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKM 573

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G+ PN   Y  LI+G CK      A  +  EMEK    P+  TY  LI GLC  G++
Sbjct: 574 TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + AE    ++ + G    + TY++L+ G C+EG   +A  +   M EKG+ P++  + SL
Sbjct: 634 DAAE----RLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSL 689

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +   CK+  +D A+ ++  M +K   P + ++  LI  L      +E L +++ +L+ + 
Sbjct: 690 LVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQW 749

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
              +   + L+ GL + G     + F      +     C+P+   Y  + + L   G+ +
Sbjct: 750 NSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN----CTPSLHTYIILARELSKVGKSI 805

Query: 491 KASKLFSDMRSDNL 504
              ++ + +R  +L
Sbjct: 806 GTDQIGNRLREVSL 819



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 214/443 (48%), Gaps = 31/443 (6%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T+  +  L+  L   + +  A++++  +   GV P+L T+N +++  CK   V  A+  +
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           +++   +L P+  T+  L+ G C+  +L  A   F  M K G  PN   Y+ LI+G C  
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EAM +  EM +  I P V+TY + I  LC +G+++ A  L++ M K+G   +V TY
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            ++I G  + G ME A+ +  +M ++G+ PN VT+++LI+  C  G    A+ ++  M  
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
              + +   +  +I GL    ++++ + ++ +ML+   +P+V T ++LI    K G ++N
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460

Query: 453 ALNFFL-------EKTDKTD----GGYC--------------------SPNHVLYAAIIQ 481
           A  F         E  ++T      G+C                    SPN   Y A+I 
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C +G+I  A  LF  M  +       TY  ++ GL +  R  +     A M + G+ P
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580

Query: 542 DAVINQVMVRGYQENGDLKSAFR 564
           + +    ++ G  +N     AF+
Sbjct: 581 NTITYTSLINGLCKNTATNLAFK 603



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 8/354 (2%)

Query: 229 VLMDGLCK-VGELRAAGNFF--VHMAKFGVFP-NIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +LM   C+   EL+   +F   +  +  G+F   ++ +N L+    K   +  A ++ ++
Sbjct: 128 ILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQ 187

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +    + P + T+N +I  LC  G+++ A  +  K+++  +  +  TY SLI G+C+   
Sbjct: 188 IFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRK 247

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++KA  V  +M + G  PN VT+S+LI+G C  G I  AM +  EM  K + P V  +T 
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I  L   G + + + L + M +   +PSV T +++I GLF+ G++  A+  + +   + 
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN V Y A+I  LC +G+   A K+F  M       +  TY  +++GL     +
Sbjct: 368 ----LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
              M++   M+K G  P  V    ++    + G L +A R    +KES     E
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDE 477


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 268/546 (49%), Gaps = 45/546 (8%)

Query: 58  LIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           L+  F E    +EAL   ++R  E+  +P + + + LL  L  +GK     +    M   
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 114 GLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           G V   DVV Y  +ID    +GDV KA +LF EM+ +GI P  V Y+ ++H LC    M 
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +AE+  R M   GV+PN +TYN L+ GY        A+  + EM   ++ P+VVTF +LM
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLFE-------- 277
             LCK G+++ A + F  MA  G  P++F YN +++G+   G      +LF+        
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 278 ---------------------AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
                                AM + +EM    + P+V TY  +I  LC +G+++ A   
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M  +G+  +   Y+ LI G+C  G + KA  + S++   G+  ++V FSS+I+  CK
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +  A  ++   V   L P  VV++ L+DG    G M++ LR++  M+ A I P+   
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             +L++G  K GRI   L+ F E   K       P+ +LY  II  L   G+ + A   F
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKG----IKPSTILYNIIIDGLFEAGRTVPAKVKF 627

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    +  + CTY+ +LRGL + +   + + L  ++  M +  D +    M+ G  + 
Sbjct: 628 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 687

Query: 557 GDLKSA 562
             ++ A
Sbjct: 688 RRVEEA 693



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 255/512 (49%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVVT+ +L+   C  G + +A ++FD M  KG  P V  Y I+++G   +  +
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 375

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P + T+N L+  Y     +++A+  ++EM  H ++PNV+T+  +
Sbjct: 376 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTV 435

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + Y+CLI G C  G+L +A  L SE+    +
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  ++ +I  LC +G++  A+ +       G+    V Y+ L+DGYC  G MEKAL 
Sbjct: 496 HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPN V + +L++G CK G ID  + L+ EM+ K + P  +++  +IDGL 
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I  +  T S ++ GLFKN                       
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR---------------------- 653

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ D  T  TM+ G+ + +R+ +   L
Sbjct: 654 -------------CFDEAIF----LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + + G+VP  V   +M+    + G ++ A
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEA 728



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 242/510 (47%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y+IL+  LC++ K  +A+ + R M E G V  P++  YN ++DG+ K 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P+ VT+  ++  LCK   +  A  F   M   GV PN + Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G+   G   EA+ +  EM +  I PDV T+N+L+  LC  G+++ A  +   M  
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 323 EGILANVVTYNSLIDGYCKEG---DM--------------------------------EK 347
           +G   +V +YN +++GY  +G   DM                                +K
Sbjct: 353 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDK 412

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+PNV+T++++I   C+ G +D AM  + +M+ + + PD   +  LI 
Sbjct: 413 AMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ 472

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +   SS+I+ L K GR+ +A N F    D T   
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF----DLTVNV 528

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  V+Y+ ++   C  G++ KA ++F  M S  + P++  Y T++ G  +  R+ + 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  E G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 257/517 (49%), Gaps = 7/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  +S  G  +EA+ V+   R+  +LP +   N L+  L K GK     + +
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M + G   DV +Y ++++    +G ++   +LFD M+  GI P +  + +LI    N 
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +F  MR+ GV PN+ TY  ++   C++  ++ A+E +++M+   + P+   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C  G L  A      +   G+  +I +++ +I+  CK G + +A ++      
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P    Y++L+ G C VG++E A  +   M   GI  N V Y +L++GYCK G +++
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            LS+  +M +KG++P+ + ++ +IDG  +AG    A   + EM    +  +   ++ ++ 
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K+    E + L+KE+    +   + T++++I G+F+  R+  A + F   +      
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG--- 704

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P  V Y+ +I  L  +G + +A  +FS M++    PD+     ++R LL+   ++  
Sbjct: 705 -LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              L+ + +     + +   ++V  +   G  +   R
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIR 800



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 224/478 (46%), Gaps = 48/478 (10%)

Query: 130 CGQGDVMKALNLFDEMIDKG-----IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           C  G  + A+ LF+    +      + PT   Y IL+      ++   A + F  +   G
Sbjct: 83  CRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 141

Query: 185 VVPNLYTYNALMDGYCKVADVNRALE-FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           +  ++   N L+ G+C+    + AL+   H        P+V ++ +L+  LC  G+   A
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201

Query: 244 GNFFVHMAKFGVF--PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            +    MA+ G    P++  YN +IDG  K G++ +A  L  EM +  I PD  TY+ ++
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC    ++ AE  L++M  +G+L N  TYN+LI GY   G  ++A+ V  +M  + + 
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 321

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV--------------------- 400
           P+VVTF+ L+   CK G I  A  ++  M +K   PDV                      
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 381

Query: 401 --------------VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
                          F  LI   +  G + + + ++ EM +  + P+V T +++I  L +
Sbjct: 382 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G++ +A+  F +  D+      +P+   Y  +IQ  C  G +LKA +L S++ ++ +  
Sbjct: 442 IGKMDDAMEKFNQMIDQG----VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           D   +++++  L +  R++D   +    + +G+ P AV+  +++ GY   G ++ A R
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  D+++   L+ G  +     E L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ S L+  L   G+   A +    +     G  CSP+ V Y  
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPDVVAYNT 224

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY++++  L +A+ M      L  M+  G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++P+      ++ GY   G  K A R  + ++   I
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 266/521 (51%), Gaps = 8/521 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI    + G   EAL +YR++    + P+++  +AL+    K+   ++V   
Sbjct: 192 LNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSL 251

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EEM   GL  ++ TY + I      G + +A  +   M D G  P VV YT+LI  LC 
Sbjct: 252 LEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCT 311

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A  +F  M+     P+  TY  ++D +    D+ R  EF+ EM      P+V+T
Sbjct: 312 AGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVIT 371

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L++ LCK G +  A +    M K GV PN+  YN LI G  +   L +A+ L + ME
Sbjct: 372 FTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNME 431

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P  +TY + I      G+ + A    +KM   GI  N+V  N+ +    + G + 
Sbjct: 432 TLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLR 491

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + +++   G+ P+ VT++ ++    KAG +D A+ L ++M      PD++V  +LI
Sbjct: 492 EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           + L K G + E  +++  + + K+ P+V T ++LI GL K G++  A+  F   T    G
Sbjct: 552 NTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMT----G 607

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN + +  I+  LC + ++  A K+   M + N  PD  T+ T++ GL+  KR+ D
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            + L   M KM + PD V    ++ G  +NG ++ AF+ +E
Sbjct: 668 AIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 262/610 (42%), Gaps = 84/610 (13%)

Query: 43  NSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKK 97
           + +E   + P V  F+ L+ A  + G+I+EA   L V RK  VLP +   N L++GL++ 
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            + D   + +  M   G+V    TY + ID     G   KAL  F++M  +GI P +V  
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
              ++ L    ++ EA+ +F  ++  G+ P+  TYN +M  Y K   V+ A+E   +M  
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537

Query: 218 HN-----------------------------------LQPNVVTFGVLMDGLCKVGELRA 242
           +                                    L P VVT+  L+ GL K G+++ 
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M   G  PN   +N ++D  CK   +  A+ +  +M      PDV T+N +I 
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ-------- 354
           GL    ++  A  L  +M K+ +  + VT  +L+ G  K G ME A  +           
Sbjct: 658 GLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVY 716

Query: 355 -------------MTEKGVEPNVVTFSSLIDGQ-CKAGNI---------DAAMGLYTEMV 391
                        +T+ G E  ++    L+ G+ CK G++              L  + V
Sbjct: 717 VDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSV 776

Query: 392 IKSLV------PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
                      P +  +  LI+G     N +    L+ EM  A   P VFT + L+    
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K+G+I    N   E  ++     C PN + +  II  L     + KA  LF D+ S +  
Sbjct: 837 KSGKI----NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFS 892

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P  CTY  +L GLL++ R+ +   L  +M+  G  P+  I  +++ G+ + GD+ +A  C
Sbjct: 893 PTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA--C 950

Query: 566 SEFLKESRIG 575
             F +  R G
Sbjct: 951 ELFKRMVREG 960



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 260/576 (45%), Gaps = 47/576 (8%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVYRKIEV---LPAIQACNALLNG 93
            +  N++E     P+ ++ ++    + + G  ++AL  + K+++    P I ACNA L  
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L + G+       +  +   GL  D VTY +++ C    G V +A+ L  +M +   EP 
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +++   LI+ L    ++ EA  MF  +++  + P + TYN L+ G  K   V RA+E + 
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M  +   PN +TF  ++D LCK  E+  A      M      P++  +N +I G     
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEK 663

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE---------- 323
            + +A+ L  +M+K  ++PD  T   L+ G+   G +E A  + +               
Sbjct: 664 RVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFW 722

Query: 324 -----GILANVVTYNSLIDG-------YCKEGDM-----------EKAL---SVCSQMT- 356
                GIL    T  +++ G        CK+G +           ++AL   SV  + T 
Sbjct: 723 EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK 782

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E GV+P + +++ LI+G     N + A  L+TEM      PDV  +  L+D   K G + 
Sbjct: 783 ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   LY++M+ +   P+  T + +I  L K+  +  AL+ F    D   G + SP    Y
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY---DLVSGDF-SPTPCTY 898

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++  L   G++ +A +LF +M     RP+N  Y  ++ G  +   +     L   M++
Sbjct: 899 GPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVR 958

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            GI PD      +V    E G +  A    E LK++
Sbjct: 959 EGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 7/457 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           GD++   NL    I   I+  +  Y I+  GL     + +    F  MRE G   N Y+Y
Sbjct: 141 GDMVVVFNLMQNQI---IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSY 197

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L+    +      ALE Y  M+   L+P++ TF  LM    K  +     +    M  
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES 257

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PNI+ Y   I    +AG + EA  +   ME     PDV TY +LI  LC  G+L+ 
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L  KM       + VTY +++D +   GD+ +     S+M   G  P+V+TF+ L++
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVN 377

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CKAGNID A  L   M  + ++P++  +  LI GL +   + + L L+  M    + P
Sbjct: 378 ALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           + +T    I    K+GR   AL  F EK  K  G   +PN V   A + +L   G++ +A
Sbjct: 438 TAYTYILFIDFYGKSGRSDKALETF-EKM-KIRG--IAPNIVACNASLYSLAEMGRLREA 493

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             +F+ ++S+ L PD+ TY  M++   +A ++ + + LL+DM +    PD ++   ++  
Sbjct: 494 KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINT 553

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
             + G +  A++    LK+ ++  +    +T  + LG
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 260/550 (47%), Gaps = 45/550 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI    + G ++EA  ++   + +++ P +   N L+ GL K+G+     E +  M
Sbjct: 546  VINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASM 605

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G   + +T+  ++DC C   +V  AL +  +M      P V+ +  +IHGL  E ++
Sbjct: 606  TGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRV 665

Query: 171  VEAESMFRSMRE---------CGVVPNLYTYNALMDGYCKVAD--VNRALEFYHEMLHHN 219
             +A  +F  M++         C ++P +   N LM+   K+A+  V+R   +       +
Sbjct: 666  SDAIWLFHQMKKMLTPDCVTLCTLLPGVVK-NGLMEDAFKIAEDFVHRLGVYVDRRFWED 724

Query: 220  LQPNVVT---------FG-------VLMDG---------LCKVGELRAAGNFFVHMAK-F 253
            L   ++T         FG       V  DG         LCK  +   A + F+   K  
Sbjct: 725  LMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL 784

Query: 254  GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            GV P +  YN LI+G     N   A +L +EM+    +PDVFTYN+L+      G++   
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L ++M       N +T+N +I    K   ++KAL +   +      P   T+  L+DG
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              K+G ++ A  L+ EMV     P+  ++  LI+G  K G++     L+K M+   I P 
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + + +SL+  L + GR+ +AL++F EK  +T G Y   + + Y  +I  L    +I +A 
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYF-EKLKQT-GLYL--DSIAYNLMIDGLGRSHRIEEAL 1020

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             L+ +M+S  + PD  TY +++  L  A  +     L  ++  +G+ P+      ++RGY
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080

Query: 554  QENGDLKSAF 563
              +G+  SA+
Sbjct: 1081 SMSGNSDSAY 1090



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 249/533 (46%), Gaps = 15/533 (2%)

Query: 38   VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
            +FN L S  +   +   ++ ++  +S+ G ++EA+ +   +   +  P I   N+L+N L
Sbjct: 496  IFNRLKSNGLAP-DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 95   IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
             K G+ D  W+ +  +    L   VVTY  LI     +G V +A+ LF  M   G  P  
Sbjct: 555  YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 155  VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            + +  ++  LC  +++  A  M   M     +P++ T+N ++ G      V+ A+  +H+
Sbjct: 615  ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 215  MLHHNLQPNVVTFGVLMDGLCKVGELRAA---GNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            M    L P+ VT   L+ G+ K G +  A      FVH  + GV+ +   +  L+ G   
Sbjct: 675  M-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVH--RLGVYVDRRFWEDLMGGILT 731

Query: 272  AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVV 330
                 + +     +    +  D      +IK LC   Q   A+ +  +  KE G+   + 
Sbjct: 732  QAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLE 791

Query: 331  TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            +YN LI+G+    + E A ++ ++M   G  P+V T++ L+D   K+G I+    LY +M
Sbjct: 792  SYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851

Query: 391  VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +  S  P+ +    +I  L K  ++ + L L+ +++    +P+  T   L+ GL K+GR+
Sbjct: 852  ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRL 911

Query: 451  SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
              A   F E  D      C PN+ +Y  +I      G +  A +LF  M  + +RPD  +
Sbjct: 912  EEAKELFEEMVDYG----CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKS 967

Query: 511  YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            YT+++  L  A R+ D +     + + G+  D++   +M+ G   +  ++ A 
Sbjct: 968  YTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 214/465 (46%), Gaps = 43/465 (9%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
             F+T+I        + +A+W++ +++  + P       LL G++K G  +  ++  E+ V
Sbjct: 651  TFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV 710

Query: 112  -----------------------------------LCGLV-ADVVTYGVLIDCCCGQGDV 135
                                               +CG V  D      +I   C     
Sbjct: 711  HRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQA 770

Query: 136  MKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
            + A ++F     + G++PT+  Y  LI G    +    A ++F  M+  G  P+++TYN 
Sbjct: 771  LVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNL 830

Query: 195  LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            L+D + K   +N   E Y +M+  + +PN +T  +++  L K   L  A + F  +    
Sbjct: 831  LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890

Query: 255  VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              P    Y  L+DG  K+G L EA  L  EM  +   P+   YNILI G    G +  A 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             L ++M +EGI  ++ +Y SL+   C+ G ++ AL    ++ + G+  + + ++ +IDG 
Sbjct: 951  ELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010

Query: 375  CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
             ++  I+ A+ LY EM  + + PD+  + +LI  L   G +++  +LY+E+    + P+V
Sbjct: 1011 GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNV 1070

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            FT ++LI G   +G   +A   +     +   G CSPN   +A +
Sbjct: 1071 FTYNALIRGYSMSGNSDSAYAVY----KRMMVGGCSPNTGTFAQL 1111


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 255/489 (52%), Gaps = 22/489 (4%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D V + Y EM+  G+V + V       C CG G   +A  +  EM+ KG  P    Y+ 
Sbjct: 406 LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSK 465

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I  LC+ +K+ +A S+F  M+  G+VP++YTY  L+D +CK   + +A +++ EMLH  
Sbjct: 466 VIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG 525

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             PNVVT+  L+    K  ++  A   F  M   G  PN+  Y  LIDGHCKAG + +A 
Sbjct: 526 CTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585

Query: 280 SL---------CSEMEK-FEIS------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +          S+M+K F++       P+V TY  L+ GLC   +++ A  LL  M   
Sbjct: 586 QIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAH 645

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   N + Y+++IDG+CK G ++ A  V ++M+E+G  PN+ T+SS ID   K   +D  
Sbjct: 646 GCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLV 705

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + + ++M+  S  P+VV++T ++DGL K G   E  +L  +M E    P+V T +++I G
Sbjct: 706 LKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K+G+I   L  F +   K     C+PN + Y  +I   C +G + +A KL  +M+   
Sbjct: 766 FGKSGKIEQCLELFRDMCSKG----CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                 ++  ++ G   ++  +  + LL ++ +   VP   + ++++  Y + G L+ A 
Sbjct: 822 WPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879

Query: 564 RCSEFLKES 572
              E +  S
Sbjct: 880 DLLEEISSS 888



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 250/524 (47%), Gaps = 32/524 (6%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    K +  +  +EEM   G+V  V TY +LID  C  G + +A  
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            FDEM+ KG  P VV YT LIH      +M  A+ +F  M   G  PN+ TY AL+DG+C
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 201 KVADVNRALEFYHEML---------------HHNLQ-PNVVTFGVLMDGLCKVGELRAAG 244
           K   + +A + Y  M                H+N + PNV+T+G L+DGLCK   ++ A 
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  PN  VY+ +IDG CK G L +A  + ++M +   SP+++TY+  I  L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
               +L+    +L KM +     NVV Y  ++DG CK G  ++A  +  +M EKG  PNV
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT++++IDG  K+G I+  + L+ +M  K   P+ + +  LI+    +G + E  +L  E
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M +      + +   +I G  +    S  L       D+       P   LY  +I    
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQEFITSIGL------LDELSENESVPVDSLYRILIDNYI 870

Query: 485 YDGQILKASKLFSDMRSD--NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
             G++  A  L  ++ S   +   +   Y +++  L  A ++   + L A MI   +VP+
Sbjct: 871 KAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPE 930

Query: 543 AVINQVMVRGYQENGDLKSAFRCSE--------FLKESRIGSSE 578
             I   +++G  +    + A + S+        +L+E   G +E
Sbjct: 931 LSILVHLIKGLIKVDKWQEALQLSDSICQMDIHWLQEKATGRTE 974



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 246/552 (44%), Gaps = 63/552 (11%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           + +P     N +++GL +   F+   +    M     + +VVTY +L+  C  +G + + 
Sbjct: 274 DFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRC 333

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             +   MI +G  P   I+  LIH  C       A  +F+ M +CG  P    YN  +  
Sbjct: 334 KRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGS 393

Query: 199 YCK-----------------------------------------VADVNRALEFYHEMLH 217
            C                                              ++A +   EM+ 
Sbjct: 394 VCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG 453

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               P+  T+  ++  LC   ++  A + F  M + G+ P+++ Y  LID  CKAG + +
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A     EM     +P+V TY  LI       Q+  A+ L + M  EG   NVVTY +LID
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573

Query: 338 GYCKEGDMEKALSVCSQMTEKGVE-----------------PNVVTFSSLIDGQCKAGNI 380
           G+CK G +EKA  + ++M    +E                 PNV+T+ +L+DG CKA  +
Sbjct: 574 GHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRV 632

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L   M+     P+ +V+ A+IDG  K G +++   ++ +M E   +P+++T SS 
Sbjct: 633 KEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSF 692

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I  LFK+ R    L+  L+   K     C+PN V+Y  ++  LC  G+  +A KL   M 
Sbjct: 693 IDCLFKDNR----LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKME 748

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                P+  TYT M+ G  ++ ++   + L  DM   G  P+ +  +V++     NG L 
Sbjct: 749 EKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLD 808

Query: 561 SAFRCSEFLKES 572
            A++  + +K++
Sbjct: 809 EAYKLLDEMKQT 820



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 254/510 (49%), Gaps = 27/510 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + S +S +I    +   +E+A  ++ +++   ++P++     L++   K G      +++
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  G   +VVTY  LI        +  A  LF+ M+ +G +P VV YT LI G C  
Sbjct: 519 DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578

Query: 168 NKMVEAESMFRSMRECGVV------------------PNLYTYNALMDGYCKVADVNRAL 209
            ++ +A  ++  MR  G +                  PN+ TY AL+DG CK   V  A 
Sbjct: 579 GQIEKACQIYARMR--GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E    ML H  +PN + +  ++DG CK+G+L+ A   F  M++ G  PN++ Y+  ID  
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            K   L   + + S+M +   +P+V  Y  ++ GLC +G+ + A  L+ KM ++G   NV
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY ++IDG+ K G +E+ L +   M  KG  PN +T+  LI+  C  G +D A  L  E
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M        ++    +I+G S++     ++ L  E+ E +  P       LI    K GR
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGR 874

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  AL+   E +  +   +   N  LYA++I+ L +  ++ KA +L++ M S N+ P+  
Sbjct: 875 LEVALDLLEEIS--SSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELS 932

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
               +++GL++  +  + + L   + +M I
Sbjct: 933 ILVHLIKGLIKVDKWQEALQLSDSICQMDI 962



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 216/493 (43%), Gaps = 59/493 (11%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM---- 180
           L+  CC  G    AL     + D G +P+   Y  LI      +K+  A  + R M    
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 181 ---------------------REC--------GVVPNLYTYNALMDGYCKVADVNRALEF 211
                                RE           VP+   YN ++ G C+ +    A++ 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDI 301

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            H M   +  PNVVT+ +L+ G  + G+L         M   G +PN  ++N LI  +CK
Sbjct: 302 LHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCK 361

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE--GLLQKMYKE----GI 325
           + +   A  L  +M K    P    YNI I  +C   +   ++   L++K Y E    G+
Sbjct: 362 SRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGV 421

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N V  ++     C  G  ++A  +  +M  KG  P+  T+S +I   C A  ++ A  
Sbjct: 422 VLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFS 481

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    +VP V  +T LID   K G +++  + + EML    TP+V T ++LIH   
Sbjct: 482 LFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYL 541

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD--- 502
           K  ++  A   F  +    +G  C PN V Y A+I   C  GQI KA ++++ MR D   
Sbjct: 542 KAKQMPVADELF--EMMLLEG--CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIES 597

Query: 503 -------NLRPDNC------TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
                   L  +NC      TY  ++ GL +A R+ +   LL  M+  G  P+ ++   +
Sbjct: 598 SDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAV 657

Query: 550 VRGYQENGDLKSA 562
           + G+ + G L+ A
Sbjct: 658 IDGFCKIGKLQDA 670


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 247/463 (53%), Gaps = 6/463 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++GL K+G+ +       EM   GL  DVV Y  LI   C +G + +   LFDEM++KG
Sbjct: 51  LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I P VV+Y+ LI+G C +    EA ++  +M E G+ P++YTY  ++ G CK     +AL
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + +  M     +P+ VT+ VL++GLCK G +  A   F  M + G    +  YN LI G 
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230

Query: 270 CKAGNLFEAMSLCSEM--EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           C  G L EAM L S +  +   + PDV T+N +I+GLC  G+L+ A  +   M + G   
Sbjct: 231 CNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG 290

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+ T + LI  Y K G ++KA+ +  ++ + G+ P+  T+S +IDG CK   ++ A GL+
Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           + M I  L P +  +  L+  L K+ ++++  RL++EM E+   P   + + +I G  K 
Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I +A        D    G  +P+   Y++ I  L   GQ+ +A   F  M +  + PD
Sbjct: 411 GDIHSAKELL---NDMQQMGL-TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPD 466

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           N  Y ++++G      + +V+ LL  M  MG++ D  I   ++
Sbjct: 467 NHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 252/487 (51%), Gaps = 6/487 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           ++I +LP I + N ++NGL K+ + +   +   EM       +  TY +L+D  C +G V
Sbjct: 2   KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A+ L  EM  KG+E  VV+Y+ LI G C++  +   +++F  M E G+ PN+  Y+ L
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++G+CK      A    H M    +QP+V T+  ++ GLCK G  R A + F  M + G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YN LI+G CK G + +A  +   M +     +V +YN LI GLC  G+L+ A  
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 316 LLQKMYKEG--ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           L   + ++G  +  +V+T+N++I G CKEG ++KA+ +   M E+G   N+ T   LI  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K+G ID AM L+  +    LVP    ++ +IDG  K   +     L+  M  + ++P+
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +F  ++L+  L K   +  A   F E  +      C P+ + +  +I      G I  A 
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESN----CEPDTISFNIMIDGTLKAGDIHSAK 417

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L +DM+   L PD  TY++ +  L +  +M +       MI  GI PD  +   +++G+
Sbjct: 418 ELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF 477

Query: 554 QENGDLK 560
             N +++
Sbjct: 478 GLNDEIE 484



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 233/450 (51%), Gaps = 6/450 (1%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           ++ D+V+Y  +I+  C +  + KA++L  EM     EP    Y IL+ GLC E ++ EA 
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   M+  G+  ++  Y+ L+ G+C    ++R    + EML   + PNVV +  L++G 
Sbjct: 66  RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G  R A      M + G+ P+++ Y C+I G CK G   +A+ L   M +    P  
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN+LI GLC  G +  A  + + M ++G    VV+YN+LI G C  G +++A+ + S 
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 355 MTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           + E G  VEP+V+TF+++I G CK G +D A+ +Y  M+ +    ++     LI    K 
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + + + L+K + +  + PS  T S +I G  K   ++ A   F     K  G   SP 
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM--KISG--LSPT 361

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  ++ +LC +  + +A +LF +M+  N  PD  ++  M+ G L+A  +     LL 
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           DM +MG+ PDA      +    + G ++ A
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 215/414 (51%), Gaps = 5/414 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+STLI  F   G ++    ++ ++    + P +   + L+NG  KKG +         M
Sbjct: 82  VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DV TY  +I   C  G   KAL+LFD M +KG EP+ V Y +LI+GLC E  +
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFG 228
            +A  +F +M E G    + +YN L+ G C    ++ A++ +  +L     ++P+V+TF 
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ GLCK G L  A   +  M + G F N+F  + LI  + K+G + +AM L   + K 
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P   TY+++I G C +  L  A+GL  +M   G+   +  YN+L+   CKE  +E+A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M E   EP+ ++F+ +IDG  KAG+I +A  L  +M    L PD   +++ I+ 
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           LSK G M+E    +  M+ + ITP      SLI G   N  I   +N   +  D
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMAD 495



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 211/445 (47%), Gaps = 36/445 (8%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M+   ++P++ +YN +++G CK   + +A++   EM   + +PN  T+ +LMDGLCK G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A      M + G+  ++ VY+ LI G C  G L    +L  EM +  ISP+V  Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G    A  +L  M + GI  +V TY  +I G CK+G   KAL +   MTEKG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            EP+ VT++ LI+G CK G I  A  ++  M+ K    +VV +  LI GL  +G + E +
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 420 RLYKEMLEAK--ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL-- 475
           +L+  +LE    + P V T +++I GL K GR+  A+  +    ++   G     H+L  
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 476 -----------------------------YAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
                                        Y+ +I   C    +  A  LFS M+   L P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
               Y T++  L +   +     L  +M +    PD +   +M+ G  + GD+ SA    
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA---K 417

Query: 567 EFLKESRIGSSETEGHTTRSFLGHL 591
           E L + +      + +T  SF+  L
Sbjct: 418 ELLNDMQQMGLTPDAYTYSSFINRL 442



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 169/327 (51%), Gaps = 2/327 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+    N L+NGL K+G     ++ +E M+  G   +VV+Y  LI   C  G + +A+ L
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242

Query: 142 FDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           F  +++ G  +EP V+ +  +I GLC E ++ +A  ++ +M E G   NL+T + L+  Y
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEY 302

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K   +++A+E +  +    L P+  T+ V++DG CK+  L  A   F  M   G+ P +
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN L+   CK  +L +A  L  EM++    PD  ++NI+I G    G +  A+ LL  
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G+  +  TY+S I+   K G ME+A      M   G+ P+   + SLI G      
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALI 406
           I+  + L  +M    ++ D+ +  +++
Sbjct: 483 IEEVINLLRQMADMGVILDLEITNSIL 509



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 5/295 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           ++TLI+     G ++EA+ ++  +      V P +   N ++ GL K+G+ D   E Y+ 
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G   ++ T  +LI      G + KA+ L+  +   G+ P+   Y+++I G C  + 
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A+ +F  M+  G+ P L+ YN LM   CK + + +A   + EM   N +P+ ++F +
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DG  K G++ +A      M + G+ P+ + Y+  I+   K G + EA      M    
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           I+PD   Y+ LIKG     ++E    LL++M   G++ ++   NS++   C   +
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAE 517



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 3/227 (1%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           LI  + + G I++A+ +++++  L   P+    + +++G  K    +     +  M + G
Sbjct: 298 LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           L   +  Y  L+   C +  + +A  LF EM +   EP  + + I+I G      +  A+
Sbjct: 358 LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAK 417

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   M++ G+ P+ YTY++ ++   K+  +  A   +  M+   + P+   +  L+ G 
Sbjct: 418 ELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF 477

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
               E+    N    MA  GV  ++ + N ++   C +      M L
Sbjct: 478 GLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMEL 524


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 249/463 (53%), Gaps = 5/463 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V +F   M+       ++ +  ++D          A++L   +  KGI+P ++   IL
Sbjct: 42  DAVSQF-NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  ++    S+   + + G  P+  T N L+ G C    V +AL F+ ++L    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           Q N V++  L++G+CK+G+ RAA  F   +      P++ +YN +ID  CK   + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L SEM    IS DV TYN LI G C VG+L+ A GLL +M  + I  NV TYN L+D  C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A SV + M +  V+P+V+T+S+L+DG      +  A  ++  M +  + PDV 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T LI+G  K+  + E L L+KEM +  + P + T SSLI GL K+GRIS   +   E 
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D+        + + Y+++I  LC +G + +A  LF+ M+   +RP+  T+T +L GL +
Sbjct: 401 RDRGQPA----DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             R+ D   +  D++  G   +     VM+ G+ + G L+ A 
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 265/514 (51%), Gaps = 11/514 (2%)

Query: 44  SLEIPKFNP----SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK 96
           SL IP F+     S  S        + ++++A+  + ++  +   P I   N +L+   K
Sbjct: 12  SLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAK 71

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
              + +       + L G+  D++T  +LI+C C  G +    ++  +++ +G  P  V 
Sbjct: 72  MKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVT 131

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
              LI GLC + ++ +A      +   G   N  +Y  L++G CK+ D   A++F  ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID 191

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               +P+VV +  ++D +CK   +  A   F  MA  G+  ++  YN LI G C  G L 
Sbjct: 192 GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ L +EM    I+P+V+TYNIL+  LC  G+++ A+ +L  M K  +  +V+TY++L+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY    +++KA  V + M+  GV P+V T++ LI+G CK   +D A+ L+ EM  K++V
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +++LIDGL K G +     L  EM +      V T SSLI GL KNG +  A+  
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F +  D+       PN   +  ++  LC  G++  A ++F D+ +     +  TY  M+ 
Sbjct: 432 FNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           G  +   + + + +L+ M   G +P+A   + ++
Sbjct: 488 GHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 246/473 (52%), Gaps = 21/473 (4%)

Query: 43  NSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK 97
           + LE+    P + +   LI  F  MG I     V  KI      P     N L+ GL  K
Sbjct: 83  HRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLK 142

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+      F+++++  G   + V+Y  LI+  C  GD   A+    ++  +  +P VV+Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMY 202

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
             +I  +C    + EA  +F  M   G+  ++ TYN L+ G+C V  +  A+   +EM+ 
Sbjct: 203 NTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVL 262

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC------K 271
             + PNV T+ +L+D LCK G+++ A +    M K  V P++  Y+ L+DG+       K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A ++F AMSL        ++PDV TY ILI G C    ++ A  L ++M+++ ++  +VT
Sbjct: 323 AQHVFNAMSLMG------VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLIDG CK G +     +  +M ++G   +V+T+SSLIDG CK G++D A+ L+ +M 
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P++  FT L+DGL K G +K+   +++++L      +V+T + +I+G  K G + 
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            AL        K +   C PN   +  II AL    +  KA KL   M +  L
Sbjct: 497 EALTML----SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 201/386 (52%), Gaps = 38/386 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   ++TLI    ++G    A+   RKI+     P +   N +++ + K       + 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM + G+ ADVVTY  LI   C  G + +A+ L +EM+ K I P V  Y IL+  LC
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 166 NENKMVEAESM-----------------------------------FRSMRECGVVPNLY 190
            E K+ EA+S+                                   F +M   GV P+++
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY  L++G+CK   V+ AL  + EM   N+ P +VT+  L+DGLCK G +    +    M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G   ++  Y+ LIDG CK G+L  A++L ++M+  EI P++FT+ IL+ GLC  G+L
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+ + Q +  +G   NV TYN +I+G+CK+G +E+AL++ S+M + G  PN  TF ++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV 396
           I    K    D A  L  +M+ + L+
Sbjct: 521 IIALFKKDENDKAEKLLRQMIARGLL 546


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 263/516 (50%), Gaps = 12/516 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFYE 108
            F+++I A  + G++ EAL +  K +++   ++ N     +L+ G   +G   S      
Sbjct: 112 TFTSVITACVKEGNVAEALRL--KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 169

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E+   GLV + VTY VLID CC  G++ KA   + EM  KGI  +V     ++ G     
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 229

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
               A +MF    E G+  N++T+N L+   CK   +N A   + E++   + PNVV++ 
Sbjct: 230 SWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G C+   + AA   +  M   G  PN   +  L+DG+ K G++  A S+   M+  
Sbjct: 289 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I P   T  I+IKGLC  G+      L  K   +G +   + YN++IDG+ KEG++  A
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            +V  +M E G+ P+ VT++SLIDG CK  NID A+ L  +M  K L  D+  +  LIDG
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K  +MK    L  E+  A ++P+ F  +S+I G      +  A++ +  K    +G  
Sbjct: 469 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY--KKMVNEGIP 526

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C      Y ++I  L   G++L AS + ++M S  + PD+  +T ++ GL    +  +  
Sbjct: 527 CDLK--TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 584

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +L DM    ++P  +I   ++ G+ + G+L+ AFR
Sbjct: 585 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 244/474 (51%), Gaps = 8/474 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI    + G+IE+A   Y +++   +  ++ + N++L G +K   + + +  +
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 238

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            + +  GL A+V T+  L+   C +G + +A NL+DE+I KGI P VV Y  +I G C +
Sbjct: 239 NDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK 297

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           + +  A  +++ M + G  PN  T+  LMDGY K  D+  A   +H M   N+ P   T 
Sbjct: 298 DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 357

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G+++ GLCK G      + F      G  P    YN +IDG  K GN+  A ++  EM +
Sbjct: 358 GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE 417

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I+P   TY  LI G C    ++ A  LL  M ++G+  ++  Y +LIDG+CK  DM+ 
Sbjct: 418 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 477

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + +++   G+ PN   ++S+I G     N++ A+ LY +MV + +  D+  +T+LID
Sbjct: 478 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 537

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K G +     ++ EML   I P     + LI+GL   G+  NA        +  +G 
Sbjct: 538 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL----EDMNGK 593

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
              P+ ++Y  +I     +G + +A +L  +M    L PDN TY  ++ G  + 
Sbjct: 594 NMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 647



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 248/492 (50%), Gaps = 8/492 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+IQ  N LL  +++K       E + +M+L G+  D  T  V++  C  +G++++A   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +   +G+E     Y+I +H LC +     A S+ R MR  G +P   T+ +++    K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V  AL    +M++     N+     LM G C  G LR+A      +++ G+ PN   
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LIDG CK GN+ +A    SEM+   I   V++ N +++G       + A  +     
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G LANV T+N+L+   CKEG M +A ++  ++  KG+ PNVV+++++I G C+  NI+
Sbjct: 243 ESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           AA  +Y EM+     P+ V FT L+DG  K G+++    ++  M +A I P+  T+  +I
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K GR     + F +   +     C P    Y  II     +G I  AS ++ +M  
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMP----YNTIIDGFIKEGNINLASNVYREMCE 417

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + P   TYT+++ G  +   +   + LL DM + G+  D      ++ G+ +  D+KS
Sbjct: 418 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 477

Query: 562 AFRCSEFLKESR 573
           A    E L E R
Sbjct: 478 A---HELLNELR 486



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 234/459 (50%), Gaps = 7/459 (1%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           FY     K  +++   +  + E  LK +   +  +++FN  ++LE    N   F+TL+  
Sbjct: 202 FYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNA-FTMFN--DALESGLANVFTFNTLLSW 258

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
             + G + EA  ++ ++    + P + + N ++ G  +K   ++  + Y+EM+  G   +
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 318

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
            VT+ +L+D    +GD+  A ++F  M D  I PT     I+I GLC   +  E   +F 
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
                G VP    YN ++DG+ K  ++N A   Y EM    + P+ VT+  L+DG CK  
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A      M + G+  +I  Y  LIDG CK  ++  A  L +E+    +SP+ F YN
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            +I G   +  +E A  L +KM  EGI  ++ TY SLIDG  K G +  A  + ++M  K
Sbjct: 499 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 558

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+    + LI+G C  G  + A  +  +M  K+++P V+++  LI G  K+GN++E 
Sbjct: 559 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 618

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNF 456
            RL+ EML+  + P   T   L++G FK +G  S  L F
Sbjct: 619 FRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 657



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 171/373 (45%), Gaps = 5/373 (1%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + P++   N L+    +      A E +++ML   +  +  T  V++    K G +  A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F+     GV  +   Y+  +   C   N   A+SL  EM      P   T+  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G +  A  L   M   G   N+    SL+ GYC +G++  AL + ++++E G+ PN 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+S LIDG CK GNI+ A   Y+EM  K +   V    ++++G  K  + +    ++ +
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
            LE+ +  +VFT ++L+  L K G+++ A N + E   K      SPN V Y  II   C
Sbjct: 241 ALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG----ISPNVVSYNNIILGHC 295

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
               I  A K++ +M  +   P+  T+T ++ G  +   + +   +   M    I+P   
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 545 INQVMVRGYQENG 557
              ++++G  + G
Sbjct: 356 TLGIIIKGLCKAG 368



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 171/360 (47%), Gaps = 5/360 (1%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           + P++    +L+  + +      A      M   GV  + F  + ++    K GN+ EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
               + +   +  D   Y+I +  LC       A  LL++M   G +    T+ S+I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            KEG++ +AL +   M   G   N+   +SL+ G C  GN+ +A+ L  E+    LVP+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V ++ LIDG  K+GN+++    Y EM    I  SV++++S++ G  K     NA   F  
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF-- 238

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D  + G    N   +  ++  LC +G++ +A  L+ ++ +  + P+  +Y  ++ G  
Sbjct: 239 -NDALESGL--ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           R   +     +  +M+  G  P+AV   +++ GY + GD+++AF     +K++ I  ++T
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 249/488 (51%), Gaps = 4/488 (0%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           +++  P+    N LL  + K     ++     +M   G+  ++ T  +LI+  C    V 
Sbjct: 54  RMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVG 113

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            A ++  +++  G +P    +T LI G+  E K+ EA  +F  M   G  P++ TY  L+
Sbjct: 114 FAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLI 173

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +G CKV + + A+     M+  N QPNV  +  ++D LCK  ++  A N F  M   G+ 
Sbjct: 174 NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+IF YN LI   C         +L +EM   +I PDV ++N ++  LC  G++  A  +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + KM + G+  NVVTY +L+DG+C   +M++A+ V   M  KG  PNV+++++LI+G CK
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              ID AM L+ EM  + L+PD V ++ LI GL     +++ + L+ EM+     P++ T
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
              L+  L KN  ++ A+          +G    P+  +    I  +C  G++  A  LF
Sbjct: 414 YRILLDYLCKNRYLAEAMALL----KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           S++ S  L+PD  TY+ M+ GL R   + +   L  +M + G   +  I   + RG+  N
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529

Query: 557 GDLKSAFR 564
            +   A +
Sbjct: 530 NETSRAIQ 537



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 214/412 (51%), Gaps = 3/412 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TLI      G I EAL ++ K+      P +     L+NGL K G   +     
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV      +V  Y  +ID  C    V +A NLF EM+ KGI P +  Y  LIH LCN 
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +     ++   M +  ++P++ ++N ++D  CK   V  A +   +M+   ++PNVVT+
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LMDG C + E+  A   F  M   G  PN+  YN LI+G+CK   + +AM L  EM +
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            E+ PD  TY+ LI GLC V +L+ A  L  +M     + N+VTY  L+D  CK   + +
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+++   +    ++P++   +  IDG C+AG ++AA  L++ +  K L PDV  ++ +I+
Sbjct: 430 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 489

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           GL + G + E  +L++EM E   T +    +++  G  +N   S A+    E
Sbjct: 490 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQE 541



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 202/378 (53%), Gaps = 8/378 (2%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
            P+VF+  T+I +  +   + EA  ++ ++    + P I   N+L++ L    ++  V  
Sbjct: 198 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 257

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EMV   ++ DVV++  ++D  C +G V +A ++ D+MI +G+EP VV YT L+ G C
Sbjct: 258 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC 317

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             ++M EA  +F +M   G +PN+ +YN L++GYCK+  +++A+  + EM    L P+ V
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 377

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ GLC V  L+ A   F  M      PN+  Y  L+D  CK   L EAM+L   +
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 437

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E   + PD+   NI I G+C  G+LE A  L   +  +G+  +V TY+ +I+G C+ G +
Sbjct: 438 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 497

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M E G   N   ++++  G  +      A+ L  EMV +    D    T  
Sbjct: 498 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 557

Query: 406 IDGLSKDG---NMKETLR 420
           +  LS DG   ++K+ LR
Sbjct: 558 VKMLSDDGLDQSLKQILR 575



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 203/404 (50%), Gaps = 5/404 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  + TLI    ++G+   A+ +   +      P + A N +++ L K  +    +
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + EMV  G+  D+ TY  LI   C   +      L +EM+D  I P VV +  ++  L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E K+ EA  +   M + GV PN+ TY ALMDG+C +++++ A++ +  M+     PNV
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +++  L++G CK+  +  A   F  M +  + P+   Y+ LI G C    L +A++L  E
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M      P++ TY IL+  LC    L  A  LL+ +    +  ++   N  IDG C+ G+
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A  + S ++ KG++P+V T+S +I+G C+ G +D A  L+ EM       +  ++  
Sbjct: 462 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 521

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +  G  ++      ++L +EM+    +    T++  +  L  +G
Sbjct: 522 ITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 214/425 (50%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ F+ M+     P+ V +  L+  +          S+   M   G+ PN+YT + L++
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V  A     ++L    QP+  TF  L+ G+   G++  A + F  M   G  P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y  LI+G CK GN   A+ L   M +    P+VF YN +I  LC   Q+  A  L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M +  + P+VV+F++++D  CK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +  +M+ + + P+VV +TAL+DG      M E ++++  M+     P+V + 
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI+G  K  RI  A+  F E   +       P+ V Y+ +I  LC+  ++  A  LF 
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQE----LIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M + +  P+  TY  +L  L + + + + M LL  +    + PD  +N + + G    G
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460

Query: 558 DLKSA 562
           +L++A
Sbjct: 461 ELEAA 465



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 184/383 (48%), Gaps = 4/383 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N +  A S F  M      P+   +N L+    K+   +  L   H+M    + PN+ T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++  C +  +  A +    + K G  P+   +  LI G    G + EA+ L  +M  
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDV TY  LI GLC VG    A  LL  M ++    NV  YN++ID  CK+  + +
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE 219

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ S+M  KG+ P++ T++SLI   C          L  EMV   ++PDVV F  ++D
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G + E   +  +M++  + P+V T ++L+ G      +  A+  F    D     
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF----DTMVCK 335

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C PN + Y  +I   C   +I KA  LF +M    L PD  TY+T++ GL   +R+ D 
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395

Query: 528 MMLLADMIKMGIVPDAVINQVMV 550
           + L  +M+    +P+ V  ++++
Sbjct: 396 IALFHEMVACSQIPNLVTYRILL 418



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 40/325 (12%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           V   LN +   K  P V  F+T++ A  + G + EA  V  K+    V P +    AL++
Sbjct: 255 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G     + D   + ++ MV  G + +V++Y  LI+  C    + KA+ LF EM  + + P
Sbjct: 315 GHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 374

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD--------------- 197
             V Y+ LIHGLC+  ++ +A ++F  M  C  +PNL TY  L+D               
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434

Query: 198 --------------------GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
                               G C+  ++  A + +  +    LQP+V T+ ++++GLC+ 
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 494

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A   F  M + G   N  +YN +  G  +      A+ L  EM     S D  T 
Sbjct: 495 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTM 554

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYK 322
            + +K L   G  +  + +L++  +
Sbjct: 555 TLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 265/519 (51%), Gaps = 15/519 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    +   ++ A  V++ +    V P       L++G +  GK+  V +  
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  D   Y VL+D  C  G   +A N+FD +I KGI+P V IY IL+HG   E
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATE 320

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + E  S    M   GV P+ + +N +   Y K A ++ A+  + +M    L PN+VT+
Sbjct: 321 GSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTY 380

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+D LCK+G +  A   F  M   G+ P+IFV++ L+ G C      +A  L  E+  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLD 440

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N L+  LC  G++  A+ L+  M + G+  +V++YN+L+DG+C  G +++
Sbjct: 441 QGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDE 500

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   +   G++P+ VT+++L+ G CKA  ID A  L+ EM++K L PDVV +  ++ 
Sbjct: 501 AAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 560

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL + G   E   LY  M+ ++   +++T + +I+GL KN  +  A   F          
Sbjct: 561 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMF--------HS 612

Query: 468 YCSPN---HVLYAAI-IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            CS +    +  A I I AL   G+   A  LF+ + +  L PD  TY  +   L++   
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + ++  L + M + G  P++ +   +VR     GD+  A
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 245/540 (45%), Gaps = 18/540 (3%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACN------ 88
           S+FN +      K  PS F+   LI  F  MG ++     +  I  L      N      
Sbjct: 75  SLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLI--LKTGWRVNDTVIFS 132

Query: 89  ALLNGLIKKGKFDSVWE-FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            LL GL    + D   +     M   G   DV +Y +L+   C +    +AL L   M D
Sbjct: 133 QLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMAD 192

Query: 148 KGI---EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
            G     P VV YT +I GLC    +  A+ +F+ M + GV PN +TY  L+ GY  +  
Sbjct: 193 DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGK 252

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
               ++   EM  H LQP+   + VL+D LCK G    A N F  + + G+ PN+ +Y  
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGI 312

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+ G+   G+L E  S    M    +SPD   +NI+         ++ A  +  KM ++ 
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  N+VTY +LID  CK G ++ A+   +QM ++G+ P++  FSSL+ G C     + A 
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ E++ + +  D V F  L+  L ++G + E  RL   ML   + P V + ++L+ G 
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH 492

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              GRI  A        D        P+ V Y  ++   C   +I  A  LF +M    L
Sbjct: 493 CLTGRIDEAAKLL----DVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            PD  TY T+L GL +  R  +   L   MI      +     +++ G  +N  +  AF+
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 211/471 (44%), Gaps = 50/471 (10%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE---SMF-RSMRECG--VVPNLYT 191
           AL LFDEM+      +V  +  L+  +        +E   S+F R +REC   V P+ +T
Sbjct: 35  ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFT 94

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPN-VVTFGVLMDGLCKVGELRAAGNFFVH- 249
           Y  L+  +C++  +      +  +L    + N  V F  L+ GLC    +  A +  +  
Sbjct: 95  YTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRR 154

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK---FEISPDVFTYNILIKGLCG 306
           M +FG  P++F Y+ L+ G C      EA+ L S M        +P+V TY  +I GLC 
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
              ++ A+G+ Q M  +G+  N  TY  LI GY   G  ++ + +  +M+  G++P+   
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ L+D  CK G    A  ++  ++ K + P+V ++  L+ G + +G++ E       M+
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              ++P     + +     K   I  A++ F    DK      SPN V Y A+I ALC  
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIF----DKMRQQRLSPNIVTYGALIDALCKL 390

Query: 487 GQI-----------------------------------LKASKLFSDMRSDNLRPDNCTY 511
           G++                                    KA +LF ++    +R D   +
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            T++  L R  R+++   L+  M+++G+ PD +    +V G+   G +  A
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 190/391 (48%), Gaps = 3/391 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+ +  A+++   I+EA+ ++   R+  + P I    AL++ L K G+ D     + +M
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  D+  +  L+   C      KA  LF E++D+GI    V +  L+  LC E ++
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           +EA+ +   M   GV P++ +YN L+DG+C    ++ A +    ++   L+P+ VT+  L
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTL 523

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK   +  A + F  M   G+ P++  YN ++ G  + G   EA  L   M     
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +++TYNI+I GLC    ++ A  +   +  + +  ++ T N +I    K G  E A+ 
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + ++  G+ P+V T+  + +   K G+++    L++ M      P+  +  AL+  L 
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             G++        ++ E   +    T S LI
Sbjct: 704 HRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 161/375 (42%), Gaps = 38/375 (10%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +N AL+ + EML H    +V  F  L+  + +     +A    V +       N  +  C
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLF------NRMIREC 84

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            I                      +++P  FTY ILI   C +G+L+        + K G
Sbjct: 85  SI----------------------KVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTG 122

Query: 325 ILAN-VVTYNSLIDGYCKEGDMEKALSVC-SQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
              N  V ++ L+ G C    +++A  +   +M E G  P+V ++S L+ G C     + 
Sbjct: 123 WRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEE 182

Query: 383 AMGLYTEMVIK---SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           A+ L + M      S  P+VV +T +IDGL K   +     +++ M++  + P+  T + 
Sbjct: 183 ALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LIHG    G+    +    E +  T G    P+  +YA ++  LC +G+  +A  +F  +
Sbjct: 243 LIHGYLSIGKWKEVVQMLQEMS--THG--LQPDCYIYAVLLDYLCKNGRCTEARNIFDSV 298

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               ++P+   Y  +L G      + ++   L  M+  G+ PD  I  +M   Y +   +
Sbjct: 299 IRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMI 358

Query: 560 KSAFRCSEFLKESRI 574
             A    + +++ R+
Sbjct: 359 DEAMHIFDKMRQQRL 373


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 258/553 (46%), Gaps = 45/553 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   ++T+I +       +EAL + +++        P + + N +++G  K+G+      
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EMV  G+  DVVTY  ++D  C    + KA  +  +M+DKG+EP  + YT +IHG  
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 E+  MFR M   G++P + T+N+ M   CK      A E +  M      P++V
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+ G    G      N F  MA  G+  N   +N LI  H K G + EAM + +EM
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +   + PDV TY+ LI   C +G+L  A     +M   G+  N V Y+SLI G+C  GD+
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525

Query: 346 EKALSVCSQMTEKGV------------------------------------EPNVVTFSS 369
            KA  + S+M  KG+                                     P +VTF+S
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNS 585

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C  G ++ A G+   MV   + PDVV +  L+ G  K G + + L L++EML  K
Sbjct: 586 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           + P+  T S ++ GLF  GR S A   F E  D       + +   Y  +++ LC +   
Sbjct: 646 VKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG----TAVDIDTYKILLKGLCRNDLT 701

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A  LF  + + + + D     T++  L + +R  +   L A +   G+VP+     VM
Sbjct: 702 DEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVM 761

Query: 550 VRGYQENGDLKSA 562
           +    + G ++ A
Sbjct: 762 IHNLLKEGSVEEA 774



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 227/479 (47%), Gaps = 41/479 (8%)

Query: 119 VVTYGVLIDCCC-------GQGDVMKALN-----------------------------LF 142
           V TYG+L+DCCC       G     + L                              L 
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYTYNALMDGYC 200
             M D G  P  + Y  +I  LC +++  EA  M + M + G    P++ ++N ++ G+ 
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  +V++A    +EM+   ++P+VVT+  ++D LCK   +  A      M   GV P+  
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  +I G+  +G+  E+  +  +M    + P + T+N  +  LC  G+ + AE + Q M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G + ++V+Y+ L+ GY  EG      ++   M +KG+  N   F+ LI    K G +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D AM ++TEM  + + PDVV ++ LI    + G + + +  + +M+   + P+     SL
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG   +G +  A     E   K   G   PN V +++II +LC +G+++ A  +F+ + 
Sbjct: 516 IHGFCMHGDLVKAKELVSEMMSK---GIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVI 572

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               RP   T+ +++ G     +M     +L  M+ +GI PD V    +V GY ++G +
Sbjct: 573 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 191/382 (50%), Gaps = 8/382 (2%)

Query: 185 VVP-NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           V P +++TY  LMD  C+    +    F+  +L   L+   +     +  LC       A
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 244 GNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK--FEISPDVFTYNIL 300
            +  +H M+  G  PN   YN +I   C      EA+ +   M K     SPDV ++N +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G    G++  A  L+ +M ++G+  +VVTYNS++D  CK   M+KA  V  QM +KGV
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EP+ +T++++I G   +G+   +  ++ +M  K L+P +V F + +  L K G  K+   
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           +++ M      P + + S L+HG    GR ++  N F    DK     C   ++L    I
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL----I 446

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A    G + +A  +F++M+   +RPD  TY+T++    R  R+ D M   + MI +G+ 
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           P+ V+   ++ G+  +GDL  A
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKA 528



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 193/378 (51%), Gaps = 2/378 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   K+G  D     + EM   G+  DVVTY  LI   C  G +  A+  F +MI 
Sbjct: 443 NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMIS 502

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVADVN 206
            G+EP  V+Y  LIHG C    +V+A+ +   M   G+  PN+  +++++   C    V 
Sbjct: 503 IGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVM 562

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A + ++ ++H   +P +VTF  L+DG C VG++  A      M   G+ P++  YN L+
Sbjct: 563 DAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+CK+G + + + L  EM   ++ P   TY+I++ GL   G+   A+ +  +M   G  
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            ++ TY  L+ G C+    ++A+++  ++     + ++   +++I+   K    + A  L
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           +  +    LVP+V  +  +I  L K+G+++E   ++  M ++   PS   ++ +I  L +
Sbjct: 743 FAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 802

Query: 447 NGRISNALNFFLEKTDKT 464
            G I  A  +++ K D T
Sbjct: 803 KGDIVKA-GYYMSKVDGT 819



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 192/407 (47%), Gaps = 41/407 (10%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI A ++ G ++EA+ V+ +++   V P +   + L++   + G+     E + +M+
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKM 170
             GL  + V Y  LI   C  GD++KA  L  EM+ KGI  P +V ++ +IH LCNE ++
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 171 VEAESMFR-----------------------------------SMRECGVVPNLYTYNAL 195
           ++A  +F                                    +M   G+ P++ TYN L
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + GYCK   ++  L  + EMLH  ++P  VT+ +++DGL   G   AA   F  M   G 
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +I  Y  L+ G C+     EA++L  ++   +   D+   N +I  L  V + E A  
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L   +   G++ NV TY  +I    KEG +E+A ++ S M + G  P+    + +I    
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL-SKDGNMKETLRL 421
           + G+I  A G Y   V  +++      T+L+  L S  G  +E ++ 
Sbjct: 802 QKGDIVKA-GYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 167/578 (28%), Positives = 279/578 (48%), Gaps = 41/578 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   +  ++  +  MG  E+A  +   ++   + P +     L+ G  K G+ +    
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 106 FYEEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +EM   G +V D V YG++I+  C +G +  A  + +EM D GI   + +Y  +I+GL
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +M E + + + M + G+ P+ Y+YN L+DGYC+   + +A E    M+ + L    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L+ G C +  +  A   +  M K GV PN    + L+DG  KAG   +A++L  E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
                ++ +V T+N +I GLC +G++  AE LL +M +     + +TY +L DGYCK G 
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A  + ++M   G  P+V  F+S I G   A        +++EM  + L P++V + A
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK---- 460
           LI G  K+GN+ E   LY EM+   + P+VF  S+L+   +K G++  A N  L+K    
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLVLQKLVNI 668

Query: 461 ------------TDK--------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
                        DK         DG   S N V++  II  LC  G+I  A  LF  +R
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSAN-VMWNVIIFGLCKSGRIADAKSLFESLR 727

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +    PDN TY++++ G   +  + +   L   M+  G+ P+ +    ++ G  ++G L 
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787

Query: 561 SAFRCSEFLKESRIGSSE-----------TEGHTTRSF 587
            A      L+   I  +             EG TT +F
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 276/567 (48%), Gaps = 19/567 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIP-KFNPSVFSTLI 59
           + ++LA A+ + +AR L        L S  PH     +F  L  +     F+   F  L+
Sbjct: 106 LLHILARARRFHDARAL--------LSSLPPH--AEPLFPHLAEVYRDFTFSAVSFDLLL 155

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A ++ G +  AL V+    K+   P++++CN LLN L++ G        Y +M + G++
Sbjct: 156 RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D  T  ++    C  G V +A+   +EM   G+E  +V Y  ++   C      +A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLC 235
             S++  G+ PN+ TY  L+ GYCK   +  A     EM    ++  + V +G++++G C
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G +  A      M   G+  N+FVYN +I+G CK G + E   +  EME   + PD +
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +YN LI G C  G +  A  + + M + G+ A  +TYN+L+ G+C    ++ AL +   M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++GV PN ++ S+L+DG  KAG  + A+ L+ E + + L  +V+ F  +I+GL K G M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E   L   M E +  P   T  +L  G  K G++  A +      +K +    +P+  +
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM----NKMEHLGFAPSVEM 571

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           + + I       Q  K + + S+M +  L P+  TY  ++ G  +   + +   L  +M+
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSA 562
             G+ P+  I   ++  + + G +  A
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEA 658



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 257/552 (46%), Gaps = 49/552 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  +I  + + G +++A  V    R   +   +   N ++NGL K G+ + V +  +EM
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D  +Y  LID  C +G + KA  +   M+  G+  T + Y  L+ G C+ + +
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  ++  M + GV PN  + + L+DG  K     +AL  + E L   L  NV+TF  +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK+G +  A      M +    P+   Y  L DG+CK G L  A  L ++ME    
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P V  +N  I G     Q      +  +M   G+  N+VTY +LI G+CKEG++ +A +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID--- 407
           +  +M   G+ PNV   S+L+    K G +D A  +  ++V   ++P   + T  ID   
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 408 -----------------------GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                                  GL K G + +   L++ +   +  P  FT SSLIHG 
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             +G I  A +      D       +PN + Y ++I  LC  G++ +A  LF+ ++S  +
Sbjct: 746 AASGSIDEAFSL----RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 505 RPDNCTYTTML----------------RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
            P+  TY T++                + ++    M + + LL  MI+  + P+ +    
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCT 861

Query: 549 MVRGYQENGDLK 560
           ++ GY ++G+++
Sbjct: 862 LIHGYIKSGNME 873



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 216/451 (47%), Gaps = 45/451 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  F  +  I++AL ++    K  V P   +C+ LL+GL K GK +     ++E 
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  +V+T+  +I+  C  G + +A  L D M +    P  + Y  L  G C   ++
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G  P++  +N+ + G+      ++  + + EM    L PN+VT+G L
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA------------ 278
           + G CK G L  A N +  M   G+ PN+F+ + L+    K G + EA            
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670

Query: 279 MSLCS----EMEKFEISPDVFT----------YNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +  CS    E++K     D             +N++I GLC  G++  A+ L + +  + 
Sbjct: 671 IPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKR 730

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            L +  TY+SLI G    G +++A S+   M   G+ PN++T++SLI G CK+G +  A+
Sbjct: 731 FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAV 790

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGN----------------MKETLRLYKEMLEA 428
            L+ ++  K + P+ + +  LID   K+G                 M+E ++L  +M+E 
Sbjct: 791 NLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIEN 850

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
            + P+  T  +LIHG  K+G +      + E
Sbjct: 851 NVDPNYITYCTLIHGYIKSGNMEEISKLYDE 881



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TL   + ++G +  A  +  K+E L   P+++  N+ + G     ++  V + + EM
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  ++VTYG LI   C +G++ +A NL+ EM++ G+ P V I + L+     E K+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + +    ++P        +D    V D          +   N     V + V+
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT---------IADGNPHSANVMWNVI 706

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G +  A + F  +      P+ F Y+ LI G   +G++ EA SL   M    +
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD------ 344
           +P++ TYN LI GLC  G+L  A  L  K+  +GI  N +TYN+LID YCKEG       
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 345 ----------MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
                     ME+A+ +  QM E  V+PN +T+ +LI G  K+GN++    LY EM I+ 
Sbjct: 827 LKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 886

Query: 395 LVP----------DVVVFTALIDGLSKDGNMK 416
           L+P          D VV     +   KDG+MK
Sbjct: 887 LLPTNWIGNWKRSDPVVVN---NWNRKDGHMK 915



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 220/474 (46%), Gaps = 48/474 (10%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNL-- 189
           D   AL+LF     +   P++V +  L+H L    +  +A ++  S+      + P+L  
Sbjct: 83  DPDAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAE 139

Query: 190 ----YTYNA-----LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
               +T++A     L+  +     ++ AL  +  M     +P++ +   L++ L + G+ 
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   +  M   GV P+ F    +   +C+ G + +A+    EME   +  ++  Y+ +
Sbjct: 200 GMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAV 259

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG- 359
           +   CG+G  E A  +L+ + ++G+  NVVTY  L+ GYCK+G ME+A  V  +M E G 
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +  + V +  +I+G C+ G +D A  +  EM    +  ++ V+  +I+GL K G M+E  
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF-------FLEKTDKTDG----GY 468
           ++ +EM +  + P  ++ ++LI G  + G +  A           L  T  T      G+
Sbjct: 380 KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439

Query: 469 CS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           CS                    PN +  + ++  L   G+  +A  L+ +  +  L  + 
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            T+ T++ GL +  RM +   LL  M ++   PD++  + +  GY + G L +A
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 44  SLEIPKFNPSVF--STLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKG 98
           SL   +F P  F  S+LI   +  G I+EA     V     + P I   N+L+ GL K G
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA----------------LNLF 142
           K       + ++   G+  + +TY  LID  C +G   +A                + L 
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLL 844

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D+MI+  ++P  + Y  LIHG      M E   ++  M   G++P  +  N        V
Sbjct: 845 DQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVV 904

Query: 203 ADVNR 207
            + NR
Sbjct: 905 NNWNR 909


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 243/472 (51%), Gaps = 4/472 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   + N ++ GL + GK     + ++EMV  G+V + +TY  +ID     GD+     L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D+M+  G +P +V Y +L+ GLC   +M E   +   M    + P+ +TY+ L DG  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +    L  + E L   +     T  +L++GLCK G++  A      +   G+ P   +
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G+C+  +L  A  +  +M+   I PD  TYN LI GLC +  +  AE L+ +M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G+  +V T+N+LID Y   G +EK  +V S M +KG++ +V++F S++   CK G I 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ +  +M+ K + P+  V+ ++ID   + G+ ++   L ++M  + ++ S+ T + L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL ++ +I  A       T +  G    P+ V Y  II A C  G   KA +L  +M  
Sbjct: 374 KGLCRSSQIDEAEELIY--TLRNQG--LRPDVVSYNTIISACCNKGDTDKALELLQEMNK 429

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             +RP   TY T++  L  A R+ D+  L   M+   + P + I  +MV  Y
Sbjct: 430 YGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 481



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P    Y ++I GL    K  +A  +F  M + GVVPN  TYN ++DG+ K  D+      
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +MLH   +PN+VT+ VL+ GLC+ G +         MA   +FP+ F Y+ L DG  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G     +SL +E  K  +    +T +IL+ GLC  G++  AE +L+ +   G++   V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI+GYC+  D+  A  +  QM  + + P+ +T+++LI+G CK   +  A  L  EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              + P V  F  LID     G +++   +  +M +  I   V +  S++    KNG+I 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A+    +   K      +PN  +Y +II A    G   +A  L   M++  +     TY
Sbjct: 314 EAVAILDDMIYKD----VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 369

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             +L+GL R+ ++ +   L+  +   G+ PD V    ++      GD   A    E L+E
Sbjct: 370 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL---ELLQE 426



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 3/380 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    +  G     L ++    K  V+     C+ LLNGL K GK     +  E +
Sbjct: 123 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 182

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GLV   V Y  LI+  C   D+  A  +F++M  + I P  + Y  LI+GLC    +
Sbjct: 183 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMV 242

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M + GV P++ T+N L+D Y     + +      +M    ++ +V++FG +
Sbjct: 243 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 302

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK G++  A      M    V PN  VYN +ID + ++G+  +A  L  +M+   +
Sbjct: 303 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 362

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S  + TYN+L+KGLC   Q++ AE L+  +  +G+  +VV+YN++I   C +GD +KAL 
Sbjct: 363 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 422

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G+ P + T+ +L+     AG +     LY +M+ K++ P   ++  ++D   
Sbjct: 423 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 482

Query: 411 KDGNMKETLRLYKEMLEAKI 430
           +  N  +   L KEM E  I
Sbjct: 483 RCENDSKVASLKKEMSEKGI 502



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           +E    P+  +++ +I G  ++G    A+ ++ EMV   +VP+ + +  +IDG  K G++
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +   RL  +ML     P++ T + L+ GL + GR+        E    +      P+   
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS----MFPDGFT 123

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y+ +   L   G+      LF++     +     T + +L GL +  ++     +L  ++
Sbjct: 124 YSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLV 183

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             G+VP  VI   ++ GY +  DL+ AF   E +K   I
Sbjct: 184 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 222


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 251/485 (51%), Gaps = 18/485 (3%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   LL+GL K   +  V+  Y +M L G+  D  T  +L++C C    V + L +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++ +G  P +V YT LI GLC E+++ +A  +F  M++ G  PN  TY  LM G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 202 VADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
             +++ AL+ + EML+       N +P V+++ +++D LCK      A + F  M   G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +  Y  L+          EA  L +EM    + P+V T+N+LI  LC  G++  A+ 
Sbjct: 274 TPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL+ M + GI+ N++TYNSLI+G+C  GD+  A  +   M  KG EP+V+ ++ LI+G C
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++ AM LY  M+     PDV  + AL+ GL + G + +  +L+  M    I   ++
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 445

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
                ++GL KNG +  A+  F    +K        +   +  +I  LC  G++  A +L
Sbjct: 446 IYGIFLNGLCKNGCLFEAMELF----NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 501

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +  + L+PD  TY  M+    R  +++   +L   M K G  PD +    ++RG+ E
Sbjct: 502 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFE 561

Query: 556 NGDLK 560
           +  L+
Sbjct: 562 SKKLE 566



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 207/393 (52%), Gaps = 17/393 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFD 101
           N   + TL+      G+I  AL ++++         I   P + + + +++ L K  + D
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + +EEM + G+   V++Y  L+          +A  LF+EM+++G++P VV + +LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLI 311

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC E K++EA+ +   M + G+VPNL TYN+L++G+C V D+N A E +  M     +
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+ + VL++G CK  ++  A   +  M + G  P++  Y  L+ G  + G + +A  L
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M+ + I  D++ Y I + GLC  G L  A  L  K+    I  ++  +N LIDG CK
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E A  +  ++ ++ ++P+VVT++ +I   C+ G +  A  L+ +M      PD + 
Sbjct: 492 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 551

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           +  LI G  +   +++ + L   M++  ++  V
Sbjct: 552 YATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 212/413 (51%), Gaps = 17/413 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI        I +A  ++ +++ L   P       L+ GL + G      + ++EM
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227

Query: 111 V----LCGL--VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +    L G+     V++Y ++ID  C      +A +LF+EM  +G+ PTV+ YT L+   
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--- 284

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                  EA+ +F  M   GV PN+ T+N L+D  CK   V  A +    M+   + PN+
Sbjct: 285 -----WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNL 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L++G C VG+L +A   FV M   G  P++  Y  LI+G+CK   + EAM L + 
Sbjct: 340 LTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +    PDV TY  L+ GL   G++  A+ L   M   GI  ++  Y   ++G CK G 
Sbjct: 400 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 459

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A+ + +++    ++ ++  F+ LIDG CKAG ++ A  L+ ++  + L PDVV +  
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +I    + G + +   L+++M +   TP   T ++LI G F++ ++   +   
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 572



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 39/410 (9%)

Query: 200 CKVADVN--RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           CK  ++   +A +F+H M++ N  P + +F  L+ GL K+         +  M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    N L++  C    + E +++ + + +    PD+ TY  LIKGLC   ++  A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG------VEPNVVTFSSLI 371
            +M K G   N +TY +L+ G C+ G++  AL +  +M           +P V+++S +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLV---------------------------PDVVVFTA 404
           D  CK    D A  L+ EM ++ +                            P+VV F  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNV 309

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LID L K+G + E   L + M++  I P++ T +SLI G    G +++A   F+    K 
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C P+ + Y  +I   C   ++ +A KL++ M     RPD  TY  +L GL +  ++
Sbjct: 370 ----CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            D   L   M   GI  D  I  + + G  +NG L  A      LK   I
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 267/546 (48%), Gaps = 27/546 (4%)

Query: 45  LEIPKFNPSVFSTLIIA----FSEMGH------------IEEALWVYRKI---EVLPAIQ 85
           L  P  +P  F T +++    FS + H            +++AL  + ++      P+  
Sbjct: 11  LTRPCSSPPGFGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTV 70

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
             N LL  + K  ++ +V+    +M   G+  DV T  +LI+  C    +  A ++  ++
Sbjct: 71  DFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKI 130

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  G +P    +T LI GLC E K+ +A  +F  M   G  PN+ TY  L++G CKV + 
Sbjct: 131 LKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 190

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N A+     M   N QP+VV +  ++D LCK  ++  A N F  M   G+ P+IF Y  L
Sbjct: 191 NAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSL 250

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I   C         +L ++M   +I PDV  ++ ++  LC  G++  A  ++  M   G+
Sbjct: 251 IHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 310

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVVTYN+L+DG+C + +M++A+ V   M   G  PNV+++++LI+G CK   +D A  
Sbjct: 311 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 370

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM  K L+P+ V +  L+      G +++ + L+ EM+     P + T   L+  L 
Sbjct: 371 LFEEMCQKELIPNTVTYNTLMHXCHV-GRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   +  A+          +G    P+  +Y  +I  +C  G++  A  +FS++ S  LR
Sbjct: 430 KKSHLDEAMALL----KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  TYT M+ GL R   + +   L  +M   G  PD      + +G  +N   K A R 
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRA 542

Query: 566 SEFLKE 571
            + L+E
Sbjct: 543 IQLLQE 548



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 264/512 (51%), Gaps = 13/512 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +   +S+ N ++S  IP   P V++   LI +F  +  +  A  V  KI  L   P  
Sbjct: 83  KQYPTVFSLSNQMDSFGIP---PDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDT 139

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL  +GK       +++M+  G   +VVTYG LI+  C  G+   A+ L   
Sbjct: 140 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 199

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M     +P VV+YT +I  LC + ++ EA ++F  M   G+ P+++TY +L+   C + +
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   ++M++  + P+VV F  ++D LCK G++  A +    M   GV PN+  YN 
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M     +P+V +YN LI G C + +++ A  L ++M ++ 
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           ++ N VTYN+L+   C  G ++ A+++  +M   G  P++ T+  L+D  CK  ++D AM
Sbjct: 380 LIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 438

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L   +   ++ PD+ ++T +IDG+ + G ++    ++  +    + P+V T + +I+GL
Sbjct: 439 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            + G +  A   F+E     DG  CSP+   Y  I Q L  + + L+A +L  +M +   
Sbjct: 499 CRRGLLDEANKLFME----MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGF 554

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             D  T T ++  L   K    V  +L++ ++
Sbjct: 555 SADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 167/578 (28%), Positives = 279/578 (48%), Gaps = 41/578 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   +  ++  +  MG  E+A  +   ++   + P +     L+ G  K G+ +    
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 106 FYEEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +EM   G +V D V YG++I+  C +G +  A  + +EM D GI   + +Y  +I+GL
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +M E + + + M + G+ P+ Y+YN L+DGYC+   + +A E    M+ + L    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L+ G C +  +  A   +  M K GV PN    + L+DG  KAG   +A++L  E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
                ++ +V T+N +I GLC +G++  AE LL +M +     + +TY +L DGYCK G 
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A  + ++M   G  P+V  F+S I G   A        +++EM  + L P++V + A
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK---- 460
           LI G  K+GN+ E   LY EM+   + P+VF  S+L+   +K G++  A N  L+K    
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLVLQKLVNI 668

Query: 461 ------------TDK--------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
                        DK         DG   S N V++  II  LC  G+I  A  LF  +R
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSAN-VMWNVIIFGLCKSGRIADAKSLFESLR 727

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +    PDN TY++++ G   +  + +   L   M+  G+ P+ +    ++ G  ++G L 
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787

Query: 561 SAFRCSEFLKESRIGSSE-----------TEGHTTRSF 587
            A      L+   I  +             EG TT +F
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 276/567 (48%), Gaps = 19/567 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIP-KFNPSVFSTLI 59
           + ++LA A+ + +AR L        L S  PH     +F  L  +     F+   F  L+
Sbjct: 106 LLHILARARRFHDARAL--------LSSLPPH--AEPLFPHLAEVYRDFTFSAVSFDLLL 155

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A ++ G +  AL V+    K+   P++++CN LLN L++ G        Y +M + G++
Sbjct: 156 RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D  T  ++    C  G V +A+   +EM   G+E  +V Y  ++   C      +A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLC 235
             S++  G+ PN+ TY  L+ GYCK   +  A     EM    ++  + V +G++++G C
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G +  A      M   G+  N+FVYN +I+G CK G + E   +  EME   + PD +
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +YN LI G C  G +  A  + + M + G+ A  +TYN+L+ G+C    ++ AL +   M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++GV PN ++ S+L+DG  KAG  + A+ L+ E + + L  +V+ F  +I+GL K G M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E   L   M E +  P   T  +L  G  K G++  A +      +K +    +P+  +
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM----NKMEHLGFAPSVEM 571

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           + + I       Q  K + + S+M +  L P+  TY  ++ G  +   + +   L  +M+
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSA 562
             G+ P+  I   ++  + + G +  A
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEA 658



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 259/550 (47%), Gaps = 33/550 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  +I  + + G +++A  V    R   +   +   N ++NGL K G+ + V +  +EM
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D  +Y  LID  C +G + KA  +   M+  G+  T + Y  L+ G C+ + +
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  ++  M + GV PN  + + L+DG  K     +AL  + E L   L  NV+TF  +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK+G +  A      M +    P+   Y  L DG+CK G L  A  L ++ME    
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P V  +N  I G     Q      +  +M   G+  N+VTY +LI G+CKEG++ +A +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID--- 407
           +  +M   G+ PNV   S+L+    K G +D A  +  ++V   ++P   + T  ID   
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 408 -----------------------GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                                  GL K G + +   L++ +   +  P  FT SSLIHG 
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
             +G I  A  F L     + G   +PN + Y ++I  LC  G++ +A  LF+ ++S  +
Sbjct: 746 AASGSIDEA--FSLRDVMLSAG--LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P+  TY T++    +  +  +   L   M++ GI P  +   +++ G    G ++ A +
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861

Query: 565 CSEFLKESRI 574
             + + E+ +
Sbjct: 862 LLDQMIENNV 871



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 262/536 (48%), Gaps = 33/536 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++T+I    ++G +EE   V +++E   + P   + N L++G  ++G     +E    M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL A  +TY  L+   C    +  AL L+  M+ +G+ P  +  + L+ GL    K 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A ++++     G+  N+ T+N +++G CK+  +  A E    M      P+ +T+  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            DG CK+G+L  A +    M   G  P++ ++N  I GH  A    +   + SEM    +
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TY  LI G C  G L  A  L  +M   G+  NV   ++L+  + KEG +++A  
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 351 VCSQMTEKGVEPNV--------------------------VTFSSLIDGQCKAGNIDAAM 384
           V  ++    + P                            V ++ +I G CK+G I  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+  +  K  +PD   +++LI G +  G++ E   L   ML A +TP++ T +SLI+GL
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+G++S A+N F    +K      SPN + Y  +I   C +G+  +A KL   M  + +
Sbjct: 781 CKSGKLSRAVNLF----NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGI 836

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +P   TY+ ++ GL     M + + LL  MI+  + P+ +    ++ GY ++G+++
Sbjct: 837 QPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 217/470 (46%), Gaps = 64/470 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  F  +  I++AL ++    K  V P   +C+ LL+GL K GK +     ++E 
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---- 166
           +  GL  +V+T+  +I+  C  G + +A  L D M +    P  + Y  L  G C     
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 167 ------ENKM-----VEAESMFRS--------------------MRECGVVPNLYTYNAL 195
                  NKM       +  MF S                    M   G+ PNL TY AL
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G+CK  +++ A   Y EM+++ + PNV     LM    K G++  A      +    +
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670

Query: 256 FPNIFV--------------------------YNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            P   +                          +N +I G CK+G + +A SL   +    
Sbjct: 671 IPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKR 730

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD FTY+ LI G    G ++ A  L   M   G+  N++TYNSLI G CK G + +A+
Sbjct: 731 FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAV 790

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ +++  KG+ PN +T+++LID  CK G    A  L  +MV + + P V+ ++ LI GL
Sbjct: 791 NLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
              G M+E ++L  +M+E  + P+  T  +LIHG  K+G +      + E
Sbjct: 851 CTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE 900



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 199/383 (51%), Gaps = 12/383 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TL   + ++G +  A  +  K+E L   P+++  N+ + G     ++  V + + EM
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  ++VTYG LI   C +G++ +A NL+ EM++ G+ P V I + L+     E K+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + +    ++P        +D    V D          +   N     V + V+
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT---------IADGNPHSANVMWNVI 706

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK G +  A + F  +      P+ F Y+ LI G   +G++ EA SL   M    +
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P++ TYN LI GLC  G+L  A  L  K+  +GI  N +TYN+LID YCKEG   +A  
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+G++P V+T+S LI G C  G ++ A+ L  +M+  ++ P+ + +  LI G  
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYI 886

Query: 411 KDGNMKETLRLYKEMLEAKITPS 433
           K GNM+E  +LY EM    + P+
Sbjct: 887 KSGNMEEISKLYDEMHIRGLLPT 909



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 164/315 (52%), Gaps = 12/315 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  LI  + + G++ EA  +Y ++    + P +  C+AL++   K+GK D      
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA---- 658

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +VL      +V   ++  C     ++ K  ++ D + D       V++ ++I GLC  
Sbjct: 659 -NLVL----QKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKS 713

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A+S+F S+R    +P+ +TY++L+ G      ++ A      ML   L PN++T+
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLCK G+L  A N F  +   G+ PN   YN LID +CK G   EA  L  +M +
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P V TY+ILI GLC  G +E A  LL +M +  +  N +TY +LI GY K G+ME+
Sbjct: 834 EGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 893

Query: 348 ALSVCSQMTEKGVEP 362
              +  +M  +G+ P
Sbjct: 894 ISKLYDEMHIRGLLP 908



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 220/474 (46%), Gaps = 48/474 (10%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNL-- 189
           D   AL+LF     +   P++V +  L+H L    +  +A ++  S+      + P+L  
Sbjct: 83  DPDAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAE 139

Query: 190 ----YTYNA-----LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
               +T++A     L+  +     ++ AL  +  M     +P++ +   L++ L + G+ 
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   +  M   GV P+ F    +   +C+ G + +A+    EME   +  ++  Y+ +
Sbjct: 200 GMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAV 259

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG- 359
           +   CG+G  E A  +L+ + ++G+  NVVTY  L+ GYCK+G ME+A  V  +M E G 
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +  + V +  +I+G C+ G +D A  +  EM    +  ++ V+  +I+GL K G M+E  
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF-------FLEKTDKTDG----GY 468
           ++ +EM +  + P  ++ ++LI G  + G +  A           L  T  T      G+
Sbjct: 380 KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439

Query: 469 CS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           CS                    PN +  + ++  L   G+  +A  L+ +  +  L  + 
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            T+ T++ GL +  RM +   LL  M ++   PD++  + +  GY + G L +A
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 3/213 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I    + G I +A  ++   R    LP     ++L++G    G  D  +   + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  +++TY  LI   C  G + +A+NLF+++  KGI P  + Y  LI   C E K 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M E G+ P + TY+ L+ G C    +  A++   +M+ +N+ PN +T+  L
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           + G  K G +      +  M   G+ P  ++ N
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 263/520 (50%), Gaps = 12/520 (2%)

Query: 27  KSRKPHHVCYSVFNALNSL--EIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVL 81
           ++++PH    S    LN++  +  + N   + T++  F E  +  EA  ++    +I + 
Sbjct: 158 RTKRPH----SALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIF 213

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N LL+ L KKG+         +++  G+ +++ T+ + I   C +G +  A+++
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D +I +G+ P VV Y  LI GLC  + +VEAE     +   G+ P+ +TYN L+DGYCK
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +  +  A +     +     P+  T+  L++GLC+  E+  A   F      G+ P + +
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C+ G + +A+ + +EM +   S D++TYN++I GLC +G +  A  L+    
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G + +V T+N+LIDGYCK+  ME  + + ++M   GV P+V+T++S+++G  KA   +
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             M  +  MV K  VP+ + +  L + L K G + E L L  E+L   ITP   + +++I
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G   NG +  A   F    ++      S     Y  +I A      +    KLF +M +
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYK---VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGA 630

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
               PD  TY  M+ G             L +MI+ G +P
Sbjct: 631 GGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIP 670



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 264/530 (49%), Gaps = 12/530 (2%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           ++   G ++EA+ V+ +++     P++ + NA++N L++ G F    + +  M   G+V 
Sbjct: 85  SYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVP 144

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DV T+ + I   C       AL L + M+ +G +   V Y  ++ G   EN  VEA  +F
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ P++ T+N L+   CK  +V  +    +++L   +  N+ TF + + GLC+ 
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A +    + + G+ P++  YN LI G CK  N+ EA     ++    + PD FTY
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G C +G L+ AE +LQ    +G + +  TY SLI+G C+  ++++AL++ +    
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG++P V+ ++ LI G C+ G I  A+ +  EM       D+  +  +I+GL K G + +
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L  + +     P VFT ++LI G  K  ++   +       +K      +P+ + Y 
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQIL----NKMWSHGVTPDVITYN 500

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           +++  L    +     + F  M      P+  TY  +   L +A ++ + + L+ +++  
Sbjct: 501 SVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNK 560

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           GI PD V    ++ G+  NGDLK A++        R+G      HTT ++
Sbjct: 561 GITPDTVSFATIISGFANNGDLKGAYQLFR-----RMGEQYKVSHTTATY 605



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 192/386 (49%), Gaps = 6/386 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++TLI  + +MG ++ A  + +    K  V      C +L+NGL +  + D     +  
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYC-SLINGLCQNDEIDRALALFNA 381

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            +  GL   V+ Y +LI   C +G +++AL + +EM + G    +  Y ++I+GLC    
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A ++       G VP+++T+N L+DGYCK   +   ++  ++M  H + P+V+T+  
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GL K  +       F  M + G  PN   YN L +  CKAG + EA+ L  E+    
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKA 348
           I+PD  ++  +I G    G L+GA  L ++M ++  +     TYN +I+ + ++ D+   
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMG 621

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M   G  P+  T+  +IDG C  GN D+      EM+ K  +P +  F  +I+ 
Sbjct: 622 EKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSV 434
           L     + E + +   M+   I P V
Sbjct: 682 LCVQHRVHEAVDIIHFMVHNGIVPEV 707



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 37/457 (8%)

Query: 132 QGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR---ECGVVP 187
           Q D +KAL +F+++  + G + +++ Y  +I  L      V  E++    R   +  ++ 
Sbjct: 17  QKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLE 76

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
            +Y     M  Y +   V  A++ +  M  +N +P+V+++  +M+ L + G  + A   F
Sbjct: 77  GVYI--GAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVF 134

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           + M   G+ P+++ +   I   C+      A+ L + M       +   Y  ++ G    
Sbjct: 135 LRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEE 194

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
                A  L   M + GI  +V T+N L+   CK+G+++++  + +++ +KG+  N+ TF
Sbjct: 195 NYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTF 254

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +  I G C+ G +  AM +   ++ + L PDVV +  LI GL K+ N+ E  +   +++ 
Sbjct: 255 NIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVN 314

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFF---------------------LEKTDKTD- 465
             + P  FT ++LI G  K G + NA                         L + D+ D 
Sbjct: 315 GGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDR 374

Query: 466 ---------GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                    G    P  +LY  +I+ LC +G IL+A ++ ++M  +    D  TY  ++ 
Sbjct: 375 ALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVIN 434

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           GL +   + D   L+ D I  G VPD      ++ GY
Sbjct: 435 GLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 170/374 (45%), Gaps = 11/374 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI    + G I +AL +  ++        I   N ++NGL K G        
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             + +  G V DV T+  LID  C Q  +   + + ++M   G+ P V+ Y  +++GL  
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  +    F +M E G VPN  TYN L +  CK   VN AL+   E+L+  + P+ V+
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           F  ++ G    G+L+ A   F  M  ++ V      YN +I+   +  +L     L  EM
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                +PD +TY ++I G C  G  +     L +M ++G + ++ T+  +I+  C +  +
Sbjct: 629 GAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRV 688

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+ +   M   G+ P VV   S  D +     + AA  +  E ++K        +  L
Sbjct: 689 HEAVDIIHFMVHNGIVPEVVNSISEADKK-----VVAAPKIVVEDLLKRSCITYYAYELL 743

Query: 406 IDGLSKDGNMKETL 419
            DG+      K+ L
Sbjct: 744 YDGIRDKKTQKQKL 757


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 252/474 (53%), Gaps = 12/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+ TLI A  ++G + E L +  ++ +   +P +   N  ++GL K  +     +  
Sbjct: 251 NAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 310

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+L G   +  TYGVL+   C  G V +A  L +++ +    P VV++  LI+G  + 
Sbjct: 311 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSR 366

Query: 168 NKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ EA++ M  SM   G  P+++TYN L+ G CK   +  A E  +EM     +PNV+T
Sbjct: 367 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+D  CK G L  A N    M+  G+  N   YNCLI   CK   + +A+++  +M 
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+FT+N LI GLC V + E A GL Q M  EG++AN +TYN+LI  + + G M+
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL + + M  +G   + +T++ LI   C+AGNI+  + L+ +M+ K L P+ +    LI
Sbjct: 547 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL + GN++  L   ++M+   +TP + T +SLI+GL K GR   ALN F    DK   
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF----DKLQV 662

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               P+ + Y  +I   C +G    A  L S        P+  T+  ++   ++
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 256/521 (49%), Gaps = 11/521 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L+ L+       V   + EM+  G+   V T+GV++   C   +V  A  L
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  ++Y  LIH L    ++ E   +   M   G +P++ T+N  + G CK
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +  ++ A +    ML     PN  T+GVLM GLC++G++  A      +      PN+ +
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVL 355

Query: 262 YNCLIDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +N LI+G+   G L EA ++  E M      PD+FTYN LI GLC  G L  A  L+ +M
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   NV+TY  LID +CKEG +E+A +V  +M+ KG+  N V ++ LI   CK   +
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ ++ +M  K   PD+  F +LI GL K    +E L LY++ML   +  +  T ++L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH   + G +  AL    +   +     C  + + Y  +I+ALC  G I K   LF DM 
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRG----CPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           S  L P+N +   ++ GL R   +   +  L DMI  G+ PD V    ++ G  + G  +
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQDL 601
            A    + L+   I       +T  S+  H K  ++ +  L
Sbjct: 652 EALNLFDKLQVEGICPDAITYNTLISW--HCKEGMFDDAHL 690



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 4/402 (0%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-F 106
           F P+ F+   L+     MG ++EA  +  K+   P +   N L+NG + +G+ D      
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-PNVVLFNTLINGYVSRGRLDEAKAVM 376

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E M+  G   D+ TY  LI   C +G ++ A  L +EM  KG EP V+ YTILI   C 
Sbjct: 377 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 436

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E ++ EA ++   M   G+  N   YN L+   CK   V  AL  + +M     +P++ T
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+ GLCKV +   A   +  M   GV  N   YN LI    + G + EA+ L ++M 
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D  TYN LIK LC  G +E    L + M  +G+  N ++ N LI+G C+ G+++
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL     M  +G+ P++VT++SLI+G CK G    A+ L+ ++ ++ + PD + +  LI
Sbjct: 617 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
               K+G   +   L    +++   P+  T   L+    K G
Sbjct: 677 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 200/375 (53%), Gaps = 4/375 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK----IEVLPAIQACNALLNGLIKKGKFD 101
           ++P  N  +F+TLI  +   G ++EA  V  +    +   P I   N L+ GL KKG   
Sbjct: 347 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           S  E   EM + G   +V+TY +LID  C +G + +A N+ DEM  KG+    V Y  LI
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC + K+ +A +MF  M   G  P+++T+N+L+ G CKV     AL  Y +ML   + 
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N +T+  L+    + G ++ A      M   G   +   YN LI   C+AGN+ + ++L
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    ++P+  + NILI GLC  G ++ A   L+ M   G+  ++VTYNSLI+G CK
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G  ++AL++  ++  +G+ P+ +T+++LI   CK G  D A  L +  V    +P+ V 
Sbjct: 647 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 706

Query: 402 FTALIDGLSKDGNMK 416
           +  L+    K+G+ +
Sbjct: 707 WYILVSNFIKEGDQE 721



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 31/376 (8%)

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           L+ +     GYC + DV                     + +L+D L   GE +      +
Sbjct: 97  LFQWAGTQKGYCHMFDV---------------------YYMLIDKLGAAGEFKTIDALLM 135

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNILIKGLCGV 307
            M + G+     ++  ++  + +AG   +A  L  +M   +   P   +YN+++  L   
Sbjct: 136 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG 195

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
              +    +  +M  +GI   V T+  ++   C   +++ A ++   MT  G  PN + +
Sbjct: 196 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 255

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            +LI    K G ++  + L  EM++   +PDV  F   I GL K   + E  +L   ML 
Sbjct: 256 QTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 315

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
              TP+ FT   L+HGL + G++  A    L K         +PN VL+  +I      G
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEA-RMLLNKVP-------NPNVVLFNTLINGYVSRG 367

Query: 488 QILKASKLFSD-MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           ++ +A  +  + M S    PD  TY T++ GL +   ++    L+ +M   G  P+ +  
Sbjct: 368 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 427

Query: 547 QVMVRGYQENGDLKSA 562
            +++  + + G L+ A
Sbjct: 428 TILIDRFCKEGRLEEA 443


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 260/497 (52%), Gaps = 8/497 (1%)

Query: 66  GHIEEALWVYRKI--EVLPAIQAC--NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G ++EA+ + R++  +  PA  A   N ++ GL K G      + ++EM    +V + +T
Sbjct: 166 GDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHIT 225

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +ID    +GD+     L+ +M+  G++P V+ Y +L+ GLC   +M E  ++   M 
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMA 285

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              +VP+ +TY+ L DG+ +  D    L  + E +   ++    T  +L++GLCK G++ 
Sbjct: 286 SRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKIS 345

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      +   G+     +YN LI+G+C+ G+L  A S+  +M+   I PD  TYN LI
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GL  V ++  A  L+ +M K G+  +V T+N+LID Y + G +EK   + S M EKG++
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVV++ S+++  CK G I  A+ +  +M IK ++P   V+ A+ID   + G+  +   L
Sbjct: 466 PNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML 525

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++M  + + PS+ T + LI GL K  +IS A        D       +P+ + Y  +I 
Sbjct: 526 AEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELL----DSLRNYGLAPDVISYNTLIS 581

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A CY     +A +L  +M    ++P   TY  +   L  A R+ ++  L   M+   +VP
Sbjct: 582 ACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVP 641

Query: 542 DAVINQVMVRGYQENGD 558
            + I  +MV  Y + G+
Sbjct: 642 CSGIYNIMVDAYAKCGE 658



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 265/558 (47%), Gaps = 26/558 (4%)

Query: 20  DVTENLLKSRKP---------HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE 70
           DV ++LL S +P         H +  +   +    + P F     S L++A + +   + 
Sbjct: 40  DVAKSLLISSQPPAASVPDLYHALASAAAASPGDPQAPSFLCDAASALVVASARLRLPDG 99

Query: 71  ALWVYRKIEVLPAIQA-------CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           AL   R + +L   +A       CN LL  L+  G+   V   +E +V      D  T+ 
Sbjct: 100 AL---RLLSLLADARAPLPSLSSCNLLLESLLSLGRHADVRGAFELLVAARARPDTFTWN 156

Query: 124 VLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +  C   GD+ +A+ +   M  D    P    Y ++I GL       +A  +F  M E
Sbjct: 157 KAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPE 216

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
             VVPN  TYN ++DG+ K  D+      + +ML H L+PNV+T+ VL+ GLC+ G +  
Sbjct: 217 KAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGE 276

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
                  MA   + P+ F Y+ L DGH + G+    +SL  E  K  +    +T +IL+ 
Sbjct: 277 TAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLN 336

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC  G++  AE +LQ +   G+L   V YN+LI+GYC+ GD+E A S+  QM  + + P
Sbjct: 337 GLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRP 396

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + +T+++LI+G  K   I  A  L  EM    + P V  F  LID   + G +++   + 
Sbjct: 397 DHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIIL 456

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M E  + P+V +  S+++   KNG+I  A+    +   K       P   +Y AII A
Sbjct: 457 SDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD----VLPGAQVYNAIIDA 512

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
               G   +A  L   M+S  + P   TY  +++GL +  ++ +   LL  +   G+ PD
Sbjct: 513 YIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572

Query: 543 AVINQVMVRG--YQENGD 558
            +    ++    Y+ N D
Sbjct: 573 VISYNTLISACCYRSNTD 590



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 3/386 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L    S  G  +  L ++    K  V      C+ LLNGL K GK     E  + +
Sbjct: 295 TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL 354

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL+   V Y  LI+  C  GD+  A ++F +M  + I P  + Y  LI+GL    ++
Sbjct: 355 VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERI 414

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M + GV P++ T+N L+D Y +   + +      +M    L+PNVV++G +
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++  CK G++  A      M    V P   VYN +ID + + G+  +A  L  +M+   +
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P + TYN+LIKGLC   Q+  AE LL  +   G+  +V++YN+LI   C   + ++AL 
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M + G++P+  T+  L      AG +     LY +M+ K +VP   ++  ++D  +
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFT 436
           K G   +   L KEM +  I    +T
Sbjct: 655 KCGEESKVEALRKEMSDKGIAVGDYT 680



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 38/451 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    + G +E    ++ ++    + P +   N LL+GL + G+        
Sbjct: 222 NHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVL 281

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    +V D  TY +L D     GD    L+LF+E + KG++      +IL++GLC +
Sbjct: 282 DEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKD 341

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +AE + +++   G++     YN L++GYC++ D+  A   + +M    ++P+ +T+
Sbjct: 342 GKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITY 401

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++GL KV  +  A +  + M K GV P++  +N LID + +AG L +   + S+M++
Sbjct: 402 NALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQE 461

Query: 288 FEISPDVFTYNILIKGLCGVGQ----------------LEGAE----------------- 314
             + P+V +Y  ++   C  G+                L GA+                 
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQ 521

Query: 315 --GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              L +KM   G+  ++VTYN LI G CK+  + +A  +   +   G+ P+V+++++LI 
Sbjct: 522 AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLIS 581

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             C   N D A+ L  EM    + P    +  L   L   G + E   LY++ML+  + P
Sbjct: 582 ACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVP 641

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
                + ++    K G  S       E +DK
Sbjct: 642 CSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 203/422 (48%), Gaps = 5/422 (1%)

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYNALMDGYC 200
           F+ ++     P    +   +        + EA  M R M   G   PN ++YN ++ G  
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K      A++ + EM    + PN +T+  ++DG  K G+L +    +  M + G+ PN+ 
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G C+AG + E  ++  EM   ++ PD FTY+IL  G    G  +    L ++ 
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K+G+     T + L++G CK+G + KA  V   +   G+    V +++LI+G C+ G++
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  ++ +M  + + PD + + ALI+GL K   + E   L  EM +  + PSV T ++L
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I    + G++      F+  +D  + G   PN V Y +I+ A C +G+IL+A  +  DM 
Sbjct: 440 IDAYGRAGQLEKC---FIILSDMQEKGL-KPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             ++ P    Y  ++   +         ML   M   G+ P  V   ++++G  +   + 
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555

Query: 561 SA 562
            A
Sbjct: 556 EA 557



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 196/392 (50%), Gaps = 5/392 (1%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           P+ +T+N  +       D++ A+     M       PN  ++ V++ GL K G    A  
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M +  V PN   YN +IDGH K G+L     L S+M +  + P+V TYN+L+ GLC
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G++     +L +M    ++ +  TY+ L DG+ + GD +  LS+  +  +KGV+    
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T S L++G CK G I  A  +   +V   L+   V++  LI+G  + G+++    ++++M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
               I P   T ++LI+GL K  RI+ A +  +E     +    +P+   +  +I A   
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIE----MEKNGVNPSVETFNTLIDAYGR 445

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            GQ+ K   + SDM+   L+P+  +Y +++    +  ++L+ + +L DM    ++P A +
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
              ++  Y E G    AF  +E +K S +  S
Sbjct: 506 YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 26/310 (8%)

Query: 13  NARCLIKDVTENL-----LKSR--KPHHVCY-SVFNALNS-------------LEIPKFN 51
           N  C I D+         +KSR  +P H+ Y ++ N L               +E    N
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F+TLI A+   G +E+   +   ++   + P + +  +++N   K GK       
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            ++M +  ++     Y  +ID     G   +A  L ++M   G+ P++V Y +LI GLC 
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           ++++ EAE +  S+R  G+ P++ +YN L+   C  ++ +RALE   EM    ++P+  T
Sbjct: 551 QSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRT 610

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L   L   G +    N +  M    V P   +YN ++D + K G   +  +L  EM 
Sbjct: 611 YRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMS 670

Query: 287 KFEISPDVFT 296
              I+   +T
Sbjct: 671 DKGIAVGDYT 680


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 242/456 (53%), Gaps = 12/456 (2%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           +P   P   +TLI  F  MG   +A  +   +E    +P +   N +++G  K G+ ++ 
Sbjct: 134 VPDIIPC--TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               + M    +  DVVTY  ++   C  G + +A+ + D M+ +   P V+ YTILI  
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C ++ + +A  +   MR+ G  P++ TYN L++G CK   ++ A++F ++M     QPN
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+T  +++  +C  G    A      M + G  P++  +N LI+  C+ G L  A+ +  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M K    P+  +YN L+ G C   +++ A   L++M   G   ++VTYN+++   CK+G
Sbjct: 369 KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E A+ + +Q++ KG  P ++T++++IDG  KAG    A+ L  EM  K L PD + ++
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+ GLS++G + E ++ + E     + P+  T +S++ GL K  +   A++F +   ++
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                C P    Y  +I+ L Y+G   +A +L +++
Sbjct: 549 G----CKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 239/468 (51%), Gaps = 7/468 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I  C  L+ G  + GK     +  E +   G V DV+TY V+I   C  G++  AL+
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALS 193

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D M    + P VV Y  ++  LC+  K+ +A  +   M +    P++ TY  L++  C
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           + + V +A++   EM      P+VVT+ VL++G+CK G L  A  F   M   G  PN+ 
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N ++   C  G   +A  L ++M +   SP V T+NILI  LC  G L  A  +L+KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K G   N ++YN L+ G+CKE  M++A+    +M  +G  P++VT+++++   CK G +
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ +  ++  K   P ++ +  +IDGL+K G   + ++L  EM    + P   T SSL
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL + G++  A+ FF E     +     PN V + +I+  LC   Q  +A      M 
Sbjct: 491 VGGLSREGKVDEAIKFFHE----FERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMI 546

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +   +P   +YT ++ GL       + + LL ++   G++  +   QV
Sbjct: 547 NRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 243/484 (50%), Gaps = 10/484 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L++ G+ +  ++F E MV  G V D++    LI   C  G   KA  + + +  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P V+ Y ++I G C   ++  A S+   M    V P++ TYN ++   C    + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E    ML  +  P+V+T+ +L++  C+   +  A      M   G  P++  YN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G L EA+   ++M      P+V T+NI+++ +C  G+   AE LL  M ++G   
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVT+N LI+  C++G + +A+ +  +M + G +PN ++++ L+ G CK   +D A+   
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             MV +   PD+V +  ++  L KDG +++ + +  ++     +P + T +++I GL K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G+   A+    E   K       P+ + Y++++  L  +G++ +A K F +     +RP+
Sbjct: 463 GKTGKAIKLLDEMRAKD----LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPN 518

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T+ +++ GL + ++    +  L  MI  G  P      +++ G    G  K A    E
Sbjct: 519 AVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL---E 575

Query: 568 FLKE 571
            L E
Sbjct: 576 LLNE 579



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 200/410 (48%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ +I  + + G I  AL V  ++ V P +   N +L  L   GK     E  + M+  
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C    V +A+ L DEM D+G  P VV Y +L++G+C E ++ EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 M   G  PN+ T+N ++   C       A +   +ML     P+VVTF +L++ 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L  A +    M K G  PN   YN L+ G CK   +  A+     M      PD
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN ++  LC  G++E A  +L ++  +G    ++TYN++IDG  K G   KA+ +  
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  K ++P+ +T+SSL+ G  + G +D A+  + E     + P+ V F +++ GL K  
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
                +     M+     P+  + + LI GL   G    AL    E  +K
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 212/443 (47%), Gaps = 15/443 (3%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+      +  L  G  N N        F S     V+ ++ + N L     +  ++   
Sbjct: 67  GLNGRAQKFDTLASGHSNSN----GNGHFSSANSSFVLEDVESNNHLRQ-LVRTGELEEG 121

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +F   M++H   P+++    L+ G C++G+ R A      +   G  P++  YN +I G
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISG 181

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CKAG +  A+S+   +++  +SPDV TYN +++ LC  G+L+ A  +L +M +     +
Sbjct: 182 YCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V+TY  LI+  C++  + +A+ +  +M ++G  P+VVT++ L++G CK G +D A+    
Sbjct: 239 VITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M      P+V+    ++  +   G   +  +L  +ML    +PSV T + LI+ L + G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +  A++  LEK  K     C PN + Y  ++   C + ++ +A +    M S    PD 
Sbjct: 359 LLGRAID-ILEKMPKHG---CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TY TML  L +  ++ D + +L  +   G  P  +    ++ G  + G    A +    
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK---L 471

Query: 569 LKESRIGSSETEGHTTRSFLGHL 591
           L E R    + +  T  S +G L
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGL 494



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
           LN L     +P +  ++T+I   ++ G   +A+ +    R  ++ P     ++L+ GL +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +GK D   +F+ E    G+  + VT+  ++   C      +A++    MI++G +PT   
Sbjct: 497 EGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETS 556

Query: 157 YTILIHGLCNENKMVEA 173
           YTILI GL  E    EA
Sbjct: 557 YTILIEGLAYEGMAKEA 573


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 268/551 (48%), Gaps = 16/551 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +  +  P   PS   F+ L+ + ++M H    L +  +++   + P +   N L+
Sbjct: 136 SSFNRMLHMHPP---PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      +    +    +++  G   D  T+  LI   C +G + +AL+LFD+ I +G +
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y  L++GLC       A  + RSM +    PN+  YN ++D  CK   V  A   
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+   + P++ T+  L+  LC + E +        M    + PN+ V++ ++D  CK
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  +   M K  + PDV TY  L+ G C   +++ A  +   M  +G + NV +
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 432

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN LI+GYC+   M+KA+ +  QM+ +G+  + VT+++LI G C  G +  A+ L+ EMV
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
               +PD+V +  L+D L K+ ++ E + L K +  + +   +   +  I G+ + G + 
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A + F   + K       P+   Y  +I  LC  G + +A+KLF  M  +    D C Y
Sbjct: 553 AARDLFSNLSSKG----LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIY 608

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            T++RG LR+        LL +M+  G   D     ++V    ++G L  +F   E L+ 
Sbjct: 609 NTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQSF---ERLRL 664

Query: 572 SRIGSSETEGH 582
             +G  + E H
Sbjct: 665 RGVGEEDRELH 675



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 251/494 (50%), Gaps = 12/494 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +    S+   ++S  IP   P V++   LI +F  +  +  A  V  K+  L   P  
Sbjct: 164 KHYSTVLSLSTQMDSFGIP---PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDN 220

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              N L+ GL  +GK       +++ +  G   DVVTYG L++  C  G+   A+ L   
Sbjct: 221 TTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS 280

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ K   P V+ Y  +I  LC + ++ EA ++F  M   G+ P+++TYN+L+   C + +
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   +EM++  + PNVV F  ++D LCK G +  A +    M K GV P++  Y  
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 400

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M      P+V +YNILI G C + +++ A GLL++M  +G
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 460

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           ++A+ VTYN+LI G C  G ++ A+++  +M   G  P++VT+  L+D  CK  ++  AM
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 520

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L   +   +L  D++V+   IDG+ + G ++    L+  +    + P V T + +IHGL
Sbjct: 521 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 580

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G +  A   F     K D   CS +  +Y  II+      +   A++L  +M ++  
Sbjct: 581 CKRGLLDEANKLF----RKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGF 636

Query: 505 RPDNCTYTTMLRGL 518
             D  T T ++  L
Sbjct: 637 SADVSTTTLIVEML 650



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 209/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ M+     P+ V +T L+  +          S+   M   G+ P++YT N L++
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 193

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  +  A     ++L    QP+  TF  L+ GLC  G++  A + F      G  P
Sbjct: 194 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 253

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y  L++G CK GN   A+ L   M +    P+V  YN +I  LC   Q+  A  L 
Sbjct: 254 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M    + PNVV FS+++D  CK 
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 373

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  +   M+ + + PDVV +TAL+DG      M E ++++  M+     P+V + 
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI+G  +  R+  A+    + + +   G  + + V Y  +I  LC+ G++  A  LF 
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQ---GLIA-DTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  TY  +L  L +   + + M+LL  +    +  D ++  + + G    G
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549

Query: 558 DLKSA 562
           +L++A
Sbjct: 550 ELEAA 554



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 183/395 (46%), Gaps = 4/395 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  M      P+   +  L+    K+   +  L    +M    + P+V T 
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++  C +  L  A +    + K G  P+   +N LI G C  G + EA+ L  +   
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDV TY  L+ GLC VG    A  LL+ M ++    NV+ YN++ID  CK+  + +
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ S+M  KG+ P++ T++SLI   C          L  EMV   ++P+VVVF+ ++D
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G +     +   M++  + P V T ++L+ G      +  A+  F     K    
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG--- 425

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C PN   Y  +I   C   ++ KA  L   M    L  D  TY T++ GL    R+   
Sbjct: 426 -CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 484

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + L  +M+  G +PD V  ++++    +N  L  A
Sbjct: 485 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 519


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 239/470 (50%), Gaps = 7/470 (1%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P       L+ G+  +       + ++EM   GL+ D  TYG+LI+  C       A+ L
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL 1073

Query: 142  FDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
             ++M  KG  +  V  Y ++I  LC +    EA  MF  M   G++P++  Y++LMDG C
Sbjct: 1074 HEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            +   +  ALEF+ EM    +  +V T+  L+ GL + G  +    F   M   G  P+ F
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             +  LIDG CK G + EA  +   M      PD+ TYN L+ GLC VGQLE A  L + +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
               GI  NV +YN LI+GYCK+  +++A     +M  KG++P+ VT+++LI   C++G +
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
              A  L+ EM        +  +  L+DGL K+G+++E + L++ + + +  P++   S L
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            + G+ + G++  A   F    D+       P+ + Y  +I  LC  G + +A KL   M 
Sbjct: 1372 LDGMCRAGKLEEAWKQF----DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427

Query: 501  SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                 PD+ T+  +++ LL+   + + + LL +M      PD  +  +++
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 250/486 (51%), Gaps = 5/486 (1%)

Query: 79   EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
            E +P     N LL  + K G + +V+  Y ++   G+  D+ T  +LI CCC    V   
Sbjct: 941  EPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCG 1000

Query: 139  LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
              +F   + +G EP  V  T L+ G+  EN + +A  +F  M + G++ +  TY  L++G
Sbjct: 1001 FGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILING 1060

Query: 199  YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             CK      A++  HE +  N + +V T+G+++D LCK G    A + F  M   G+ P+
Sbjct: 1061 LCKARKTGLAIKL-HEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPD 1119

Query: 259  IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            + VY+ L+DG C+ G L EA+    EME   IS DV+TYN LI GL   G  +     L 
Sbjct: 1120 VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 1179

Query: 319  KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
             M   G   +  T+  LIDG CKEG + +A  +   M  KG EP+++T+++L++G C  G
Sbjct: 1180 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVG 1239

Query: 379  NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             ++ A  L+  +  + +  +V  +  LI+G  KD  + E  R ++EM    + PS  T +
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299

Query: 439  SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +LI  L ++GR+  A   F+E   +T G +   +   Y  ++  LC +G + +A  LF  
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEM--QTCGQFLKLS--TYCVLLDGLCKNGHLEEAMDLFQS 1355

Query: 499  MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            ++    +P+   ++ +L G+ RA ++ +      ++ K G+ PD +   +++ G    G 
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415

Query: 559  LKSAFR 564
            L  A +
Sbjct: 1416 LSEAVK 1421



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 198/399 (49%), Gaps = 4/399 (1%)

Query: 90   LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
            +++ L K G      + + EM+  G++ DVV Y  L+D  C  G + +AL  F EM  +G
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150

Query: 150  IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            I   V  Y  LIHGL       E       M + G  P+ +T+  L+DG CK   V  A 
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210

Query: 210  EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            +    M H   +P+++T+  LM+GLC VG+L  A   F  +A  G+  N+F YN LI+G+
Sbjct: 1211 QILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 1270

Query: 270  CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            CK   + EA     EM    + P   TYN LI  LC  G++  A+ L  +M   G    +
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 1330

Query: 330  VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             TY  L+DG CK G +E+A+ +   + +   +PN+  FS L+DG C+AG ++ A   + E
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 1390

Query: 390  MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
            +    L PD + +  LI+GL   G + E ++L  +M E    P   T + +I  L K   
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450

Query: 450  ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I  A+    E  ++      SP+  + + ++    +D Q
Sbjct: 1451 IHEAIQLLEEMRNRN----FSPDEAVTSMLLCLASFDPQ 1485



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 199/356 (55%), Gaps = 3/356 (0%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V+S+L+      G ++EAL  ++++E   +   +   N+L++GL + G +  V  F   M
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            V  G   D  T+ +LID  C +G V +A  + + M  KG EP ++ Y  L++GLC   ++
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             +A  +F S+ + G+  N+++YN L++GYCK   ++ A  F+ EM    L+P+ VT+  L
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301

Query: 231  MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            +  LC+ G +R A   FV M   G F  +  Y  L+DG CK G+L EAM L   ++K E 
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361

Query: 291  SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             P++  ++IL+ G+C  G+LE A     ++ K G+  + + YN LI+G C +G + +A+ 
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 1421

Query: 351  VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            +  QM EKG  P+ +TF+ +I    K   I  A+ L  EM  ++  PD  V + L+
Sbjct: 1422 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 194/410 (47%), Gaps = 10/410 (2%)

Query: 184  GVVPNLYTYNALMDGYCK--VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
            G   +L  +   +   C+  +  +N A++ +   L     P   TF  L+  + K+G   
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 242  AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                 +  +   G+ P+++  N LI   C    +     +     K    PD  T   L+
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 302  KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            KG+     +  A  L  +M K+G+L +  TY  LI+G CK      A+ +  +M +   +
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCK 1082

Query: 362  PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
             +V T+  +ID  CK G    A+ +++EM+   ++PDVVV+++L+DGL + G +KE L  
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 422  YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            +KEM    I+  V+T +SLIHGL + G +   + +FL      D G+ SP+   +  +I 
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAG-LWKEVTWFLNLM--VDRGF-SPDAFTFTILID 1198

Query: 482  ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             LC +G++ +A ++   MR     PD  TY T++ GL    ++ D   L   +   GI  
Sbjct: 1199 GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258

Query: 542  DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            +     +++ GY ++  +  AFR   F +E R    +    T  + +G L
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFR---FFEEMRPKGLKPSTVTYNTLIGAL 1305



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 19/327 (5%)

Query: 252  KFGVFPNIFVYNCLIDGHCKAG--------NLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            K G   ++  +   +   C+ G         LF+  SLCSE       P   T+N L+  
Sbjct: 902  KIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDR-SLCSEP-----MPCTDTFNHLLAS 955

Query: 304  LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            +  +G       + +K+   GI  ++ T N LI   C    +     V     ++G EP+
Sbjct: 956  VAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPD 1015

Query: 364  VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             VT ++L+ G      I  A+ L+ EM  K L+ D   +  LI+GL K       ++L++
Sbjct: 1016 AVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHE 1075

Query: 424  EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            +M +      VFT   +I  L K+G  + AL+ F E      G    P+ V+Y++++  L
Sbjct: 1076 KM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMI----GAGILPDVVVYSSLMDGL 1130

Query: 484  CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
            C  G++ +A + F +M    +  D  TY +++ GL RA    +V   L  M+  G  PDA
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 544  VINQVMVRGYQENGDLKSAFRCSEFLK 570
                +++ G  + G +  A +  E ++
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMR 1217



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 53   SVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            S +  L+    + GH+EEA+ ++   +K E  P I+  + LL+G+ + GK +  W+ ++E
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 1390

Query: 110  MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            +   GL  D + Y +LI+  C +G + +A+ L  +M +KG  P  + + ++I  L  EN+
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450

Query: 170  MVEAESMFRSMRECGVVPN 188
            + EA  +   MR     P+
Sbjct: 1451 IHEAIQLLEEMRNRNFSPD 1469


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 174/573 (30%), Positives = 272/573 (47%), Gaps = 77/573 (13%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           SV +TL+  F  +G   EAL V R +    V P + +   LL  L++ G + SVW+ +++
Sbjct: 178 SVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKD 237

Query: 110 MV--------------LCGLV---------------------ADVVTYGVLIDCCCGQGD 134
           M+              +CG                        DVVT+ +LI+ CC  G 
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              A++    M+  G+EP+V  +T ++H LC E  +VEA  +F  +++ G+ PN   YN 
Sbjct: 298 TWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           LMDGY K  +V +A   Y EM    + P+ VTF +L+ G  K G +  +      +   G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM----------------------------- 285
           +F +  +Y+ ++   C AG L EAM L  E+                             
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477

Query: 286 EKFEI------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           E + I      +P   T N L+ GLC  G L+ A  LL +M ++G   N V Y  L+DGY
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGY 537

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            K  ++E A  +  +M E+G+ P+ V F++LIDG  KAGN++ A  ++ EM     VP+ 
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             + +LI GL   G + E L+L KEM +  +    FT + +I G  + G++  A+  FL 
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFL- 656

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D    G   P+   +  +I   C    ++ A ++ + M S  L PD  TY T + G  
Sbjct: 657 --DMQRIGLL-PDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYC 713

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           R ++M   +++L  +I  GIVPD V    M+ G
Sbjct: 714 RMRKMNQAVIILDQLISAGIVPDTVTYNTMLSG 746



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 238/494 (48%), Gaps = 16/494 (3%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEV 80
           N++++RK       +F+ +  + I   N ++++TL+  + +   + +A  +Y   R   V
Sbjct: 332 NVVEARK-------LFDGIQDMGIAP-NAAIYNTLMDGYFKAREVAQASLLYEEMRTTGV 383

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P     N L+ G  K G+ +      +++++ GL  D   Y V++   C  G + +A+ 
Sbjct: 384 SPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMK 443

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L  E+++KG+  +VV +  LI          +A   +R M  CG  P+  T N+L+ G C
Sbjct: 444 LLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLC 503

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   +  A    + ML      N V + VL+DG  K+  L  A   +  M + G++P+  
Sbjct: 504 RKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAV 563

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  LIDG  KAGN+ EA  +  EM      P+ F YN LI+GLC  G++  A  L ++M
Sbjct: 564 AFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEM 623

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            ++G+L++  T+N +IDG+C+ G M+ A+     M   G+ P++ TF+ LI G CKA ++
Sbjct: 624 RQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDM 683

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  +  +M    L PD+  +   + G  +   M + + +  +++ A I P   T +++
Sbjct: 684 VGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTM 743

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G+      S+ L+  +  T K       PN +    ++   C  G   KA      +R
Sbjct: 744 LSGI-----CSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLR 798

Query: 501 SDNLRPDNCTYTTM 514
             +   D  +Y  +
Sbjct: 799 EISFGFDEISYRIL 812



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 170/358 (47%), Gaps = 37/358 (10%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F++LI A+S  G  ++A   YR   +    P+   CN+LL GL +KG           M+
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRML 519

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   + V Y VL+D      ++  A  L+ EM ++GI P  V +T LI GL     + 
Sbjct: 520 EKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVE 579

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M   G VPN + YN+L+ G C    V  AL+   EM    L  +  TF +++
Sbjct: 580 EAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG C+ G+++ A   F+ M + G+ P+IF +N LI G+CKA ++  A  + ++M    + 
Sbjct: 640 DGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLD 699

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG------------- 338
           PD+ TYN  + G C + ++  A  +L ++   GI+ + VTYN+++ G             
Sbjct: 700 PDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILT 759

Query: 339 ---------------------YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
                                +CK+G  EKAL    ++ E     + +++  L    C
Sbjct: 760 AKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 192/425 (45%), Gaps = 6/425 (1%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           E    +   L+ G  N     EA  + R MR  GV P L +   L+    ++ D     +
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            + +M+    +P+ +TF  ++ G C+   +    +    M KF   P++  +N LI+  C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G  + A+     M +  + P V T+  ++  LC  G +  A  L   +   GI  N  
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            YN+L+DGY K  ++ +A  +  +M   GV P+ VTF+ L+ G  K G I+ +  L  ++
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           ++  L  D  ++  ++  L   G + E ++L +E+LE  +T SV   +SLI    + G  
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A   F         G+ +P+     +++  LC  G + +A  L   M       +   
Sbjct: 474 DKA---FEAYRIMVRCGF-TPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVA 529

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           YT +L G  +   +     L  +M + GI PDAV    ++ G  + G+++ A+    FL+
Sbjct: 530 YTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEV--FLE 587

Query: 571 ESRIG 575
            S IG
Sbjct: 588 MSAIG 592



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 200/435 (45%), Gaps = 4/435 (0%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL +   M   G+ P +   TIL+  L           +F+ M   G  P+  T+NA++
Sbjct: 195 EALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMI 254

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+C+   V       H M      P+VVTF +L++  C  G    A ++   M + GV 
Sbjct: 255 CGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE 314

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  +  ++   C+ GN+ EA  L   ++   I+P+   YN L+ G     ++  A  L
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLL 374

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M   G+  + VT+N L+ G+ K G +E +  +   +   G+  +   +  ++   C 
Sbjct: 375 YEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCW 434

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG +D AM L  E++ K L   VV F +LI   S+ G   +    Y+ M+    TPS  T
Sbjct: 435 AGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SL+ GL + G +  A        +K   G+   N V Y  ++        +  A  L+
Sbjct: 495 CNSLLMGLCRKGWLQEARILLYRMLEK---GF-PINKVAYTVLLDGYFKMNNLEGAQFLW 550

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M+   + PD   +T ++ GL +A  + +   +  +M  +G VP+      ++RG  + 
Sbjct: 551 KEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDC 610

Query: 557 GDLKSAFRCSEFLKE 571
           G +  A +  + +++
Sbjct: 611 GRVTEALKLEKEMRQ 625


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 145/427 (33%), Positives = 232/427 (54%), Gaps = 12/427 (2%)

Query: 66  GHIEEALWVYRKIEVLPAIQAC------NALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           GH+  A  + RK   L +   C      + +++G  K G+ D      +EM   G+  + 
Sbjct: 111 GHLLPAAELLRK--ALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNA 168

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
             Y  L+D    Q +  +   +  EM   G+EPTV  YTIL+ GL     + + ES+F  
Sbjct: 169 CCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDE 228

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           ++   V  ++Y Y+A+++ YC+  +V RA E + E + + ++PN  T+G L++G CK+G+
Sbjct: 229 IKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQ 288

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           + AA      M   GV  N  ++N +IDG+C+ G + +A+ + + ME+  I  DV+TYN 
Sbjct: 289 IEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNT 348

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L  GLC V ++E A+ LL  M + G+ +N V+Y +LI  + KEGDM +A  +   M  KG
Sbjct: 349 LACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG 408

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+VVT++ +IDG  K+G+I  A     EM  K LVPDV  + AL+ G   +G +   L
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVAL 468

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           RL++EM +    P+V   ++LI GL K GR   A  F+    D       +P+  LY+ +
Sbjct: 469 RLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFY----DNMLAAGLTPDDTLYSML 524

Query: 480 IQALCYD 486
           + +L  D
Sbjct: 525 VGSLHTD 531



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 205/398 (51%), Gaps = 4/398 (1%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T +  ++++ G C   +M +A  +   M   GV  N   YN L+D Y +  +  R  E  
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM    ++P V T+ +L+DGL   G++    + F  + +  V  +++ Y+ +I+ +C+A
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN+  A  +  E     I P+  TY  LI G C +GQ+E AE LL  M   G+  N + +
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDGYC+ G ++KAL + + M   G++ +V T+++L  G C+   ++ A  L   M  
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             +  + V +T LI   SK+G+M E  RL+++M      PSV T + +I G  K+G I  
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIRE 431

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  F  E   K       P+   YAA++   C +G++  A +LF +M+    +P+   YT
Sbjct: 432 AERFKKEMEKKG----LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            ++ GL +  R  +      +M+  G+ PD  +  ++V
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 186/372 (50%), Gaps = 3/372 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ L+  ++   +      V +++E   V P +     L++GL   G    V  
Sbjct: 165 KLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVES 224

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++E+    +  DV  Y  +I+  C  G+V +A  +FDE +  GIEP    Y  LI+G C
Sbjct: 225 VFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFC 284

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++  AE +   M+  GV  N   +N ++DGYC+   V++ALE    M    +Q +V 
Sbjct: 285 KIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVY 344

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L  GLC+V  +  A      M + GV  N   Y  LI  H K G++ EA  L  +M
Sbjct: 345 TYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDM 404

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E     P V TYN++I G    G +  AE   ++M K+G++ +V TY +L+ G+C  G +
Sbjct: 405 EGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKV 464

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + AL +  +M ++G +PNVV +++LI G  K G  + A   Y  M+   L PD  +++ L
Sbjct: 465 DVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSML 524

Query: 406 IDGLSKDGNMKE 417
           +  L  D    E
Sbjct: 525 VGSLHTDKRKDE 536



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 4/347 (1%)

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           ++  V++DG CK G +  A      M + GV  N   YN L+D + +  N      +  E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME   + P V TY IL+ GL   G +   E +  ++ ++ +  +V  Y+++I+ YC+ G+
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A  V  +    G+EPN  T+ +LI+G CK G I+AA  L T+M ++ +  + ++F  
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +IDG  + G + + L +   M    I   V+T ++L  GL +  R+ +A       T+  
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                  N+V Y  +I     +G +++A +LF DM     RP   TY  M+ G +++  +
Sbjct: 374 ----VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSI 429

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +      +M K G+VPD      +V G+  NG +  A R  E +K+
Sbjct: 430 REAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQ 476



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 16/222 (7%)

Query: 345 MEKALSVCSQMTEKGVEPNVVT---FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           + KAL+ C         P  +T    S ++DG CKAG +D A  L  EM    +  +   
Sbjct: 120 LRKALASC---------PGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACC 170

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  L+D  ++  N      + KEM    + P+V T + L+ GL   G IS   + F E  
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K   G    +   Y+A+I A C  G + +AS++F +   + + P+  TY  ++ G  + 
Sbjct: 231 RKNVAG----DVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKI 286

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++    MLL DM   G+  + +I   M+ GY  +G +  A 
Sbjct: 287 GQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKAL 328


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 170/617 (27%), Positives = 288/617 (46%), Gaps = 72/617 (11%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y +A+ +++ + +  + S+       S+F AL ++  +    PSVF  LI  
Sbjct: 120 HILVKARMYDSAKSILRHLCQMGIGSK-------SIFGALMDTYPLCNSIPSVFDLLIRV 172

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           + + G I+ A+  +  + ++   P++  CN +L  ++K  + + VW  + EM   G+  +
Sbjct: 173 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 232

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G++ KA NL  +M + G  PT+V Y  L++  C + +   A  +  
Sbjct: 233 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 292

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+  ++ TYN  +D  C      +A     +M    + PN VT+  L++G  K G
Sbjct: 293 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 352

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-------- 290
           ++  A   F  M+KF + PN   YN LI GHC  G+  EA+ L   ME   +        
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNV 412

Query: 291 ---------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
                            D FT N+L+  LC  G+L  AE  L  M + G++ N +TY+ +
Sbjct: 413 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 472

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+GY   GD   A S    M + G  P+  T+ SL+ G CK GN+  A      +     
Sbjct: 473 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 532

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
             D V++  L+    K GN+ E + L+ +M++  + P  +T SSL+ GL + G+   A+ 
Sbjct: 533 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 592

Query: 456 FFLEKTDKTDGGYCSPNHVLYA-----------------------------------AII 480
            F     +   G   PNHV+Y                                    AII
Sbjct: 593 LFGTAMGR---GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 649

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            +    GQ++KA+  FS MR   + P+  TY  +L G  + + +L  + L + M++ GI 
Sbjct: 650 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 709

Query: 541 PDAVINQVMVRGYQENG 557
           PD +    ++ G  ++G
Sbjct: 710 PDKLTFHSLILGLSKSG 726



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 175/599 (29%), Positives = 287/599 (47%), Gaps = 45/599 (7%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQA 86
           K   + +S+F  ++   I   N   F+ LI      G++++A  + +++E    +P I  
Sbjct: 212 KRTELVWSLFREMSDKGICP-NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            N LLN   KKG++ +  E  + M+  G+ ADV TY V ID  C      KA  L  +M 
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            + I P  V Y  LI+G   E K+  A  +F  M +  + PN  TYNAL+ G+C V D  
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 207 RALEFYHEM----LHHNLQPNVV-------------------TFGVLMDGLCKVGELRAA 243
            AL     M    L  N   NV                    T  VL+  LC+ G+L  A
Sbjct: 391 EALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 450

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
             F  HM++ G+ PN   Y+C+I+G+   G+   A S   +M K    P  FTY  L+KG
Sbjct: 451 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 510

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G L  A+  L +++      + V YN+L+   CK G++ +A+++  +M +  V P+
Sbjct: 511 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 570

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLY-TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
             T+SSL+ G C+ G    A+ L+ T M   +L P+ V++T L+DGLSK G+ K     +
Sbjct: 571 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 630

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM++    P     +++I    + G++  A +FF   +     G C PN   Y  ++  
Sbjct: 631 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF---STMRWWGVC-PNLATYNILLHG 686

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK------RMLDVMML------ 530
                 +L+   L+S M  + + PD  T+ +++ GL ++       ++L  M++      
Sbjct: 687 FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVV 746

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE-TEGHTTRSFL 588
           L +M++ G++P       ++ G    GD++ AF+  + ++    GS E  E    R  L
Sbjct: 747 LHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 235/522 (45%), Gaps = 34/522 (6%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  + P     N L+NG +K+GK     + + EM    L  + VTY  LI   C  GD 
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 136 MKALNLFDEMIDKGIE--------PTVVIYTI---------------LIHGLCNENKMVE 172
            +AL L D M   G+           + +Y +               L+  LC + K+ E
Sbjct: 390 EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 449

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           AE     M   G+VPN  TY+ +++GY  + D   A  F+ +M+     P+  T+G L+ 
Sbjct: 450 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 509

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK G L  A  F   +       +  +YN L+   CK+GNL EA++L  +M +  + P
Sbjct: 510 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 569

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSV 351
           D +TY+ L+ GLC  G+   A  L       G L  N V Y  L+DG  K G  + A   
Sbjct: 570 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 629

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M +KG  P+ V F+++ID   + G +  A   ++ M    + P++  +  L+ G SK
Sbjct: 630 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 689

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF----LEKT-----D 462
              +   L LY  M+   I P   T  SLI GL K+G     +       +E++     +
Sbjct: 690 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHE 749

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
             + G   P H  Y  +I  +C  G I  A KL  +M +          + M+RGLL   
Sbjct: 750 MLENGVI-PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 808

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +  D M++L  M++M ++P       ++  +  +  +  A +
Sbjct: 809 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 850



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 243/532 (45%), Gaps = 55/532 (10%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           +  +E G++ EA+ VY  +           CN L++ L + GK     +F   M   GLV
Sbjct: 404 LRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE-- 174
            + +TY  +I+     GD + A + FD+MI  G  P+   Y  L+ GLC    +VEA+  
Sbjct: 464 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 175 ---------------------------------SMFRSMRECGVVPNLYTYNALMDGYCK 201
                                            ++F  M +  V+P+ YTY++L+ G C+
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 202 VADVNRAL-EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                 A+  F   M    L PN V +  L+DGL K G  +AA  FF  M K G  P+  
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 643

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N +ID   + G + +A    S M  + + P++ TYNIL+ G      L     L   M
Sbjct: 644 AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 703

Query: 321 YKEGILANVVTYNSLIDGYCKEGD------------MEKALSVCSQMTEKGVEPNVVTFS 368
            +EGI  + +T++SLI G  K G             ME++  V  +M E GV P    + 
Sbjct: 704 MREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYI 763

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LI+G C+ G+I  A  L  EM         V  +A++ GL   G  ++ + +   ML  
Sbjct: 764 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRM 823

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           ++ P++ T ++L+H   ++ +I+ AL   L+   +  G     + V Y  +I  +C +G 
Sbjct: 824 RLLPTIATFTTLMHRFCRDAKIAEALK--LKGVMELCG--LKLDVVAYNVLIMGMCANGD 879

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
              A +L+ +MR  +L P+  TY  ++  +  A  ++    LL D+ + G++
Sbjct: 880 SAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 204/467 (43%), Gaps = 63/467 (13%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           ++ +LI     E  +  A   F  +   G  P++YT N ++    K          + EM
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + PNV TF +L++GLC  G L+ AGN    M + G  P I  YN L++ +CK G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A+ L   M    I  DV TYN+ I  LC   +   A  LL+KM KE I  N VTYN+L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC-------------------- 375
           I+G+ KEG +  A  V ++M++  + PN VT+++LI G C                    
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 376 ---KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE--------------- 417
              + GN+  AM +Y  M       D      L+  L +DG + E               
Sbjct: 405 RLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 464

Query: 418 --------------------TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
                                   + +M++    PS FT  SL+ GL K G +  A   F
Sbjct: 465 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK-F 523

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           L +     G   + + V+Y  ++   C  G + +A  LF  M  +N+ PD+ TY+++L G
Sbjct: 524 LNRLHYIPG---AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 580

Query: 518 LLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQENGDLKSAF 563
           L R  + +  + L    +  G + P+ V+   +V G  + G  K+AF
Sbjct: 581 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 627



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 196/404 (48%), Gaps = 18/404 (4%)

Query: 42  LNSLE-IPKFNPSV-FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN L  IP    SV ++TL+    + G++ EA+ ++ K+    VLP     ++LL GL +
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 97  KGK-FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           KGK   +V  F   M    L  + V Y  L+D     G    A   F+EM+ KG  P  V
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 643

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            +  +I       +M++A   F +MR  GV PNL TYN L+ G+ K   + R L  Y  M
Sbjct: 644 AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 703

Query: 216 LHHNLQPNVVTFGVLMDGLCKVG----ELRAAGNFFVH--------MAKFGVFPNIFVYN 263
           +   + P+ +TF  L+ GL K G     ++  G   +         M + GV P    Y 
Sbjct: 704 MREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYI 763

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI+G C+ G++  A  L  EME           + +++GL   G+ E A  +L  M + 
Sbjct: 764 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRM 823

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            +L  + T+ +L+  +C++  + +AL +   M   G++ +VV ++ LI G C  G+  AA
Sbjct: 824 RLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAA 883

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             LY EM  + L P++  +  L+D +S   N+ +  +L  ++ E
Sbjct: 884 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 927



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 15/292 (5%)

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVV--TYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +++ LC +G   G++ +   +     L N +   ++ LI  Y KEG ++ A+     +  
Sbjct: 134 ILRHLCQMGI--GSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 191

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G +P+V T + ++    K    +    L+ EM  K + P+V  F  LI+GL  +GN+K+
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHV 474
              L K+M E    P++ T ++L++   K GR   A+   ++ + K  + D   C+    
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEAD--VCT---- 305

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y   I  LC + +  KA  L   MR + + P+  TY T++ G ++  ++     +  +M
Sbjct: 306 -YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM 364

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
            K  + P+ V    ++ G+   GD + A R  + ++ + +  +E  G+ T +
Sbjct: 365 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE-HGNVTEA 415



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 129/327 (39%), Gaps = 50/327 (15%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ L+   S+ GH + A + +    K    P   A NA+++   ++G+     +F+
Sbjct: 606 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 665

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP--------------- 152
             M   G+  ++ TY +L+     +  +++ L+L+  M+ +GI P               
Sbjct: 666 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 725

Query: 153 ------------------TVVI--------------YTILIHGLCNENKMVEAESMFRSM 180
                             TVV+              Y  LI+G+C    +  A  +   M
Sbjct: 726 GIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 785

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G   +    +A++ G         A+     ML   L P + TF  LM   C+  ++
Sbjct: 786 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 845

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M   G+  ++  YN LI G C  G+   A  L  EM   ++ P++ TY +L
Sbjct: 846 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 905

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILA 327
           +  +     L   E LL  + + G+++
Sbjct: 906 VDAISAANNLIQGEKLLTDLQERGLIS 932


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 160/518 (30%), Positives = 268/518 (51%), Gaps = 8/518 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +STL+  +  +  +++A  V+  +    V P + + N ++NG  K  + D    
Sbjct: 235 KSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALN 294

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM+L      ++ +  ++D          A++L   +  KGI+P +    ILI+  C
Sbjct: 295 LFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           +  ++    S+   + + G  P+  T N L+ G C    V +AL F+ ++L    Q N V
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 413

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L++G+CK+G+ R A      +      PN+ +Y+ +ID  CK   + EA  L SEM
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               IS DV TY+ LI G C VG+L+ A GLL +M  + I  +V TY  L+D   KEG +
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A SV + M +  V+P+V T+++L++G      +  A  ++  M +  + PDV  +T L
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  K   + E L L+KEM +  + P   T SSL+ GL K+GRIS   +   E  D+  
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ 653

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                 + + Y ++I  LC +G + KA  LF+ M+   +RP+  T+T +L GL +  R+ 
Sbjct: 654 PA----DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           D   +  D++  G   D  I  VM+ G+ + G L+ A 
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 282/598 (47%), Gaps = 76/598 (12%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   ++TLI     +G    A+   RKI+     P ++  N +++ L K       + 
Sbjct: 95  QLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYG 154

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM + G+ A+VVTY  LI   C  G + +AL L + M+ K I P V  Y IL+  LC
Sbjct: 155 LFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALC 214

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ EA+S+   M +  V  N+ TY+ LMDGY  V +V +A   ++ M    + P+V 
Sbjct: 215 KEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 274

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHM--AKF------------------------------ 253
           ++ ++++G CK+  +  A N F  M  ++F                              
Sbjct: 275 SYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 334

Query: 254 --GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+ P++F  N LI+  C  G +    S+ +++ K    P   T N LIKGLC  GQ++
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVK 394

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL---------------------- 349
            A     K+  +G   N V+Y +LI+G CK GD   A+                      
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII 454

Query: 350 -SVC------------SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            ++C            S+MT KG+  +VVT+S+LI G C  G +  A+GL  EMV+K++ 
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN 514

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDV  +T L+D L K+G +KE   +   ML+A + P VFT ++L++G      +  A + 
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F    +       +P+   Y  +I   C    + +A  LF +M   N+ PD  TY++++ 
Sbjct: 575 F----NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           GL ++ R+  V  L+ +M   G   D +    ++ G  +NG L  A      +K+  I
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 271/528 (51%), Gaps = 15/528 (2%)

Query: 29  RKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRK--IEVLPAI 84
           +K  HV    FNA++ + +    P V  ++ +I  F ++  +++AL ++++  +   P I
Sbjct: 255 KKAQHV----FNAMSLMGV---TPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPI 307

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              N +L+   K   + +       + L G+  D+ T  +LI+C C  G +    ++  +
Sbjct: 308 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 367

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           ++ +G  P+ V    LI GLC + ++ +A      +   G   N  +Y  L++G CK+ D
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD 427

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
              A++   ++     +PNV  +  ++D LCK   +  A   F  M   G+  ++  Y+ 
Sbjct: 428 TRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYST 487

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI G C  G L EA+ L +EM    I+PDV TY IL+  L   G+++ A+ +L  M K  
Sbjct: 488 LIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC 547

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +V TYN+L++GY    +++KA  V + M+  GV P+V T++ LI+G CK+  +D A+
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM  K++VPD V +++L+DGL K G +     L  EM +      V T +SLI GL
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            KNG +  A+  F +  D+       PN   +  ++  LC  G++  A ++F D+ +   
Sbjct: 668 CKNGHLDKAIALFNKMKDQG----IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             D   Y  M+ G  +   + + + +L+ M + G +P+AV   +++  
Sbjct: 724 HLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 247/473 (52%), Gaps = 21/473 (4%)

Query: 43  NSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK 97
           + LE+    P +F+   LI  F  MG I     V  KI      P+    N L+ GL  K
Sbjct: 331 HRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLK 390

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+      F+++++  G   + V+Y  LI+  C  GD   A+ L  ++  +  +P V +Y
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 450

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I  LC    + EA  +F  M   G+  ++ TY+ L+ G+C V  +  A+   +EM+ 
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC------K 271
             + P+V T+ +L+D L K G+++ A +    M K  V P++F YN L++G+       K
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A ++F AMSL        ++PDV TY ILI G C    ++ A  L ++M+++ ++ + VT
Sbjct: 571 AQHVFNAMSLMG------VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SL+DG CK G +     +  +M ++G   +V+T++SLIDG CK G++D A+ L+ +M 
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P+   FT L+DGL K G +K+   +++++L       V+  + +I+G  K G + 
Sbjct: 685 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLE 744

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            AL        K +   C PN V +  II AL    +  KA KL   M +  L
Sbjct: 745 EALTML----SKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 243/490 (49%), Gaps = 23/490 (4%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+ GL  KG+      F+++++  G   + V+Y  LI+  C  GD   A+  
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             ++  +  +P V +Y  +I  LC    + EA  +F  M   G+  N+ TY+ L+ G+C 
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  +  AL   + M+   + PNV T+ +L+D LCK G+++ A +    M K  V  N+  
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 262 YNCLIDGHC------KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
           Y+ L+DG+       KA ++F AMSL        ++PDV +YNI+I G C + +++ A  
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMG------VTPDVHSYNIMINGFCKIKRVDKALN 294

Query: 316 LLQKMYKEGILAN---VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           L    +KE IL+    ++ +N ++D + K      A+S+  ++  KG++P++ T + LI+
Sbjct: 295 L----FKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILIN 350

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             C  G I     +  +++ +   P  V    LI GL   G +K+ L  + ++L      
Sbjct: 351 CFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 410

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  + ++LI+G+ K G    A+        K DG    PN  +Y+ II ALC    + +A
Sbjct: 411 NQVSYATLINGVCKIGDTRGAIKLL----RKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             LFS+M    +  D  TY+T++ G     ++ + + LL +M+   I PD     ++V  
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 553 YQENGDLKSA 562
             + G +K A
Sbjct: 527 LGKEGKVKEA 536



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 201/386 (52%), Gaps = 38/386 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   ++TLI    ++G    A+ + RKI+     P ++  + +++ L K       + 
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM + G+ ADVVTY  LI   C  G + +A+ L +EM+ K I P V  YTIL+  L 
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 166 NENKMVEAESM-----------------------------------FRSMRECGVVPNLY 190
            E K+ EA+S+                                   F +M   GV P+++
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVH 588

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY  L++G+CK   V+ AL  + EM   N+ P+ VT+  L+DGLCK G +    +    M
Sbjct: 589 TYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G   ++  YN LIDG CK G+L +A++L ++M+   I P+ FT+ IL+ GLC  G+L
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 708

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+ + Q +  +G   +V  YN +I G+CK+G +E+AL++ S+M E G  PN VTF  +
Sbjct: 709 KDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDII 768

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV 396
           I+   K    D A  L  +M+ + L+
Sbjct: 769 INALFKKDENDKAEKLLRQMIARGLL 794


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/403 (34%), Positives = 228/403 (56%), Gaps = 4/403 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A + +++GL K G+ D      ++M   G+  + + Y  L+DC   Q D  +   + + M
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 238

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GIE TV  YTIL+  L     + + E++F  M+   VV ++Y Y A+++ YC+  ++
Sbjct: 239 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 298

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA +   E + + ++PN  T+GVL++G CK+G++ AA      M   GV  N  ++N +
Sbjct: 299 RRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+ G + +A+ + + MEK  +  D++TYN L  GLC V +L+ A+ LL  M + G+
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 418

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N VTY +LI  +CK+GDM +A  +  +M EKG  P+VVT++ +IDG  K G+I  A  
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K  VPDV  + +L+ G   +G +   L+L++EM +    P+V   ++LI GL 
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           K GR   A   +    D    G   P+  LY+A++ +L  D +
Sbjct: 539 KEGRSEAAFQLY---DDMLKAGLI-PDDSLYSALVGSLHTDNR 577



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 208/393 (52%), Gaps = 4/393 (1%)

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           ++++ GLC   ++ +A  +   M   GV  N   YN+L+D Y +  D  R  E    M +
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++  V T+ +L+D L    ++      F  M    V  ++++Y  +I+ +C+AGN+  
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  E     + P+  TY +LI G C +GQ+E AE LL  M  +G+  N + +N++ID
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           GYC++G ++ AL + + M + GVE ++ T+++L  G C+   +D A  L   M+   +VP
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + V +T LI    KDG+M E  RL++EM E   TPSV T + +I G  K G I  A  F 
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFR 480

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   K   G+  P+   YA+++   C +G++  A KLF +M+     P+   YT ++ G
Sbjct: 481 KEMEKK---GFV-PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           L +  R      L  DM+K G++PD  +   +V
Sbjct: 537 LAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 180/347 (51%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++E L +     +   +     L++ L        V   + EM    +V DV  Y  +
Sbjct: 229 GRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAV 288

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+  C  G++ +A  + DE +  G+EP    Y +LI+G C   +M  AE +   M+  GV
Sbjct: 289 INAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGV 348

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             N   +N ++DGYC+   V+ AL+    M    ++ ++ T+  L  GLC+V  L  A  
Sbjct: 349 GLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKT 408

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M + GV PN   Y  LI  HCK G++ EA  L  EM +   +P V TYN++I G  
Sbjct: 409 LLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYT 468

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +  AE   ++M K+G + +V TY SL+ G+C  G ++ AL +  +M ++G EPNVV
Sbjct: 469 KKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 528

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +++LI G  K G  +AA  LY +M+   L+PD  +++AL+  L  D
Sbjct: 529 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTD 575



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 10/346 (2%)

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           V++DGLCK G +  A      M + GV  N   YN L+D + +  +      +   ME  
Sbjct: 182 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 241

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I   V TY IL+  L     +   E L  +M    ++ +V  Y ++I+ YC+ G+M +A
Sbjct: 242 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 301

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V  +    GVEPN  T+  LI+G CK G ++AA  L  +M  + +  + ++F  +IDG
Sbjct: 302 AKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTD 465
             + G + + L++   M +  +   ++T ++L  GL +  R+  A   L+  +E      
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG---- 417

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN+V Y  +I   C DG +++A +LF +M      P   TY  M+ G  +   + 
Sbjct: 418 ---VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +      +M K G VPD      +V G+  NG +  A +  E +K+
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 520



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            PSV  ++ +I  +++ G I EA    +++E    +P +    +L++G    GK D   +
Sbjct: 454 TPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALK 513

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   G   +VV Y  LI     +G    A  L+D+M+  G+ P   +Y+ L+  L 
Sbjct: 514 LFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 573

Query: 166 NENK 169
            +N+
Sbjct: 574 TDNR 577


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 263/513 (51%), Gaps = 7/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+I  S +G     +  Y ++    V P +   NA++N L K G         +++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  TY  +I   C + D+  AL +F++M  +G EP  V Y+ LI+GLC+  ++
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + R M   G++P  +T    +   C +     A   + +M +   +PNV T+  L
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L+ A   F  M++ GVFPN   YN LI+   +   +  A  + + M +  +
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             ++ TYN +IKG C +G  + A  ++  M + G  AN+VTYN++I GYC  G+   AL 
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M + G +P+  +++ LI G CK   +++A GL+ EMV   L P+ V +TALIDG  
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           KD  +     L + M  +   P+V T + LIHGL K    S A    L K    +G +  
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE--LCKVMIEEGIF-- 767

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y A+I  LC +G    A ++F+ M      P+  TY++++R L +  ++ +   L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            A++ + G++PD +    M+  Y  +G ++ AF
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 256/504 (50%), Gaps = 7/504 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I A  + G++ +A  + +K+   E+ P      +++ G  +K   DS  + + +M
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   + VTY  LI+  C  G V +A +L  EMI  GI PT    T  I  LC+    
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F  M+  G  PN+YTY AL+ G C    +  A+  +H M    + PN VT+  L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ L +   ++ A      M + G+F NI  YN +I G+C  G+  +AM + + M +   
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S ++ TYN +IKG C  G    A  +L  M   G   +  +Y  LI G+CK   ME A  
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M + G+ PN VT+++LIDG CK   +D A  L   M      P+V  +  LI GL+
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K  N      L K M+E  I P+V T +++I GL KNG  S AL  F +  ++     C 
Sbjct: 747 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG----CL 802

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y+++I+AL  +G++ +A  LF+++    L PD  TY  M+   + + ++      
Sbjct: 803 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 862

Query: 531 LADMIKMGIVPDAVINQVMVRGYQ 554
           L  MIK G  P      V+++G +
Sbjct: 863 LGRMIKAGCQPTLWTYGVLIKGLK 886



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 246/504 (48%), Gaps = 17/504 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+       ++ AL V+ ++      P     + L+NGL   G+ +  ++   EM
Sbjct: 422 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G++    T    I   C  G    A  LF +M +KG EP V  YT LI GLC    +
Sbjct: 482 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M   GV PN  TYNAL++   +   +  A    + M  + L  N+VT+  +
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C +G+ + A     +M + G   N+  YN +I G+C +GN   A+ +   M     
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD ++Y  LI G C + ++E A GL  +M  +G+  N VTY +LIDGYCK+  ++ A S
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 721

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G  PNV T++ LI G  K  N   A  L   M+ + + P+VV +TA+IDGL 
Sbjct: 722 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+G+    L ++ +M+E    P++ T SSLI  L + G++  A N F E           
Sbjct: 782 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG----LI 837

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y  +I+A    G++  A      M     +P   TY  +++GL           L
Sbjct: 838 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE-------YL 890

Query: 531 LADMIKMGIVPDAVINQVMVRGYQ 554
           LAD  ++  +PD V N     GYQ
Sbjct: 891 LADQ-RLAALPDVVPNCSF--GYQ 911



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 190/425 (44%), Gaps = 27/425 (6%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N   ++T+I  + + G+   AL +    R     P   +   L+ G  K  K +S +  +
Sbjct: 629  NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             EMV  GL  + VTY  LID  C    +  A +L + M   G  P V  Y +LIHGL  +
Sbjct: 689  NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            N    AE + + M E G+ PN+ TY A++DG CK    + ALE +++M+     PN++T+
Sbjct: 749  NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              L+  L + G++  A N F  + + G+ P+   Y  +I+ +  +G +  A +    M K
Sbjct: 809  SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868

Query: 288  FEISPDVFTYNILIKGL--------------------CGVG----QLEGAEGLLQKMYKE 323
                P ++TY +LIKGL                    C  G      +    +  K+ + 
Sbjct: 869  AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 928

Query: 324  GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
                +V   N+L+      G   +A  +   M  +G+ P+   ++SL+    +  N+D A
Sbjct: 929  DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 988

Query: 384  MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
            MG++  M  +     +  +  LI  L +    KE    ++ ML     P     + LI G
Sbjct: 989  MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 1048

Query: 444  LFKNG 448
            L ++G
Sbjct: 1049 LLRDG 1053



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 24/354 (6%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P +Q  N L++GL K+  F    E  + M+  G+  +VVTY  +ID  C  G    AL +
Sbjct: 733  PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 142  FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            F++MI++G  P ++ Y+ LI  L  E K+ EAE++F  +   G++P+  TY  +++ Y  
Sbjct: 793  FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 202  VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL--------------------CKVG--- 238
               V  A  F   M+    QP + T+GVL+ GL                    C  G   
Sbjct: 853  SGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQT 912

Query: 239  -ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A       +A+     ++ V N L+     AG  FEA  L   M    + PD   Y
Sbjct: 913  TDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 972

Query: 298  NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            N L+  L  V  ++ A G+ + M  +G   ++  Y  LI   C+    ++A      M  
Sbjct: 973  NSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 1032

Query: 358  KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            +   P+ V  + LIDG  + G  D  M     M  +  +P   ++T L    SK
Sbjct: 1033 RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 247/469 (52%), Gaps = 10/469 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +V+S L+  +     +  AL +  +I++L   P++  CN+LL  L++  + D  W+  E 
Sbjct: 185 TVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEG 244

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+  +     + I+  C +G++     +  EM + GI+  V+ YTI+I  LC  + 
Sbjct: 245 MQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISC 304

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A S+   M  CG+  +  + ++++DGYCK    ++A+   +     N++PN+  +  
Sbjct: 305 VKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLN---FFNVRPNIFVYSS 361

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            M  LCK G +  A   F  M++FG++P+ F Y  +I G+CK G++ +A     EM KF 
Sbjct: 362 FMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFG 421

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I+P V TY +LI   C  G +  AE LLQ+M  EG++ +VVT+N LIDG+ K+G ++KA 
Sbjct: 422 ITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAF 481

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M   G+ P+ VT+++LI      G  + A  +  E++ + L PDV+ FT +IDG 
Sbjct: 482 ELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGF 541

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           SK GN +E   ++  M E  + P V T S+L++G  +  R+  A   FL+  D       
Sbjct: 542 SKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAG----L 597

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            P+ VLY  +I   C  G +  A  L + M  D   P+  T+     G 
Sbjct: 598 KPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF 646



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 205/449 (45%), Gaps = 42/449 (9%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G +    +Y++L+     E+K+  A ++   ++   + P++   N+L+    +   ++ A
Sbjct: 179 GTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLA 238

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID- 267
            +    M    +  N     + ++  C  G +++     + M  +G+  ++  Y  +ID 
Sbjct: 239 WDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDA 298

Query: 268 ----------------------------------GHCKAGNLFEAMSLCSEMEKFEISPD 293
                                             G+CK G   +A++L   +  F + P+
Sbjct: 299 LCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINL---LNFFNVRPN 355

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           +F Y+  +  LC  G +  A    Q+M + G+  +   Y  +I GYCK GD+ KA     
Sbjct: 356 IFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLG 415

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M + G+ P+V T++ LI+  CK+G++  A  L   M+++ L+PDVV F  LIDG  K G
Sbjct: 416 EMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKG 475

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +++   L   M  A ++P   T ++LIH L   G  + A +   E   +      SP+ 
Sbjct: 476 YLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRG----LSPDV 531

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + +  +I      G   +A  ++S M   +++PD  T + +L G  RA+RM +   L   
Sbjct: 532 MTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLK 591

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           M+  G+ PD V+   ++ G+   G++ +A
Sbjct: 592 MLDAGLKPDLVLYNNLIHGFCSAGNMNAA 620



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 223/457 (48%), Gaps = 16/457 (3%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL-----IHGLCNENKMVEAESMFRS 179
           L  CC G    +++L     ++  G     V+  IL     I G   E ++ +   +F+ 
Sbjct: 115 LSQCCSGLEHTIRSLCRLIHILVYGKRNYRVMDLILFLVRNIGGAVGEEELCDL--LFKL 172

Query: 180 MRECGV-VPNLYT-YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           + + G    +L T Y+ L+D Y   + V+ AL   HE+   N+ P++     L+  L + 
Sbjct: 173 VYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRS 232

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            +L  A +    M  FG+  N  + +  I+ +C  GN+     +  EM+ + I  DV  Y
Sbjct: 233 HQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAY 292

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I+I  LC +  ++ A  LL KM   GI  + V+ +S+IDGYCK+G  +KA+++ +    
Sbjct: 293 TIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFN- 351

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             V PN+  +SS +   CK GN+  A   + EM    L PD   +T +I G  K G++ +
Sbjct: 352 --VRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINK 409

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             +   EML+  ITPSV T + LI+   K+G ++ A  + L++    +G    P+ V + 
Sbjct: 410 AFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMA-EYLLQRM-MLEG--LIPDVVTFN 465

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I      G + KA +L   MRS  + PD  TY  ++  L+      +   +L ++I+ 
Sbjct: 466 CLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRR 525

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           G+ PD +    ++ G+ + G+ + AF    ++ E  +
Sbjct: 526 GLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHV 562



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 5/307 (1%)

Query: 41  ALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQAC---NALLNGLI 95
           A+N L      P++F  S+ +    + G++ EA   ++++        C     ++ G  
Sbjct: 343 AINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYC 402

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K G  +  +++  EM+  G+   V TY +LI+ CC  GD+  A  L   M+ +G+ P VV
Sbjct: 403 KVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVV 462

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            +  LI G   +  + +A  +   MR  G+ P+  TYNAL+         N A +  HE+
Sbjct: 463 TFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHEL 522

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +   L P+V+TF  ++DG  K G    A   + +M++  V P++   + L++G+C+A  +
Sbjct: 523 IRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRM 582

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA +L  +M    + PD+  YN LI G C  G +  A  L+  M  +G L N+ T+ + 
Sbjct: 583 DEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAF 642

Query: 336 IDGYCKE 342
             G+ K+
Sbjct: 643 ALGFEKK 649


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 265/536 (49%), Gaps = 31/536 (5%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK------FDSV 103
           ++F++L+ A+ +      A  + +K+E     P     N L+  +   G+      F+  
Sbjct: 379 TIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELA 438

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            + Y EM+  G V + V       C CG G   KA  +  EM+  G  P    Y+ +I  
Sbjct: 439 EKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGF 498

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LCN +++  A  +F+ M+  GVVP++YTY  L+D + K   + +A  +  EM+    +P 
Sbjct: 499 LCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPT 558

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+  L+    K  ++  A   F  M   G FPN+  Y  LIDG+CK+GN+ +A  + +
Sbjct: 559 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 618

Query: 284 EMEK----------FEI------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            M            F+I       P+V TY  L+ GLC   +++ A  LL+ M+ +G   
Sbjct: 619 RMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N + Y++LIDG+CK   +++A  V  +M E+G  PNV T+SSLID   K   +D  + + 
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           ++M+  S  P++V++T +IDGLSK     E  +L   M E    P+V T +++I G  K 
Sbjct: 739 SKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 798

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G++   L  F E   K     C+PN V Y  +I   C  G + +A  L  +M+       
Sbjct: 799 GKVDKCLELFREMGSKG----CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +Y  ++ G  R    +  + LL ++ K G  P  ++ +V++  + + G L+ A 
Sbjct: 855 VSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVAL 908



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 245/508 (48%), Gaps = 51/508 (10%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    + ++ +  ++EM   G+V DV TY +LIDC    G + +A N
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
             DEM+  G EPTVV YT LIH      K+  A  +F  M   G  PN+ TY AL+DGYC
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 201 KVADVNRALEFYHEM--------------LHHNL--QPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++ +A + Y  M              + +N+  +PNVVT+G L+DGLCK  +++ A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           +    M   G  PN  VY+ LIDG CKA  L EA  +  +M +   +P+V+TY+ LI  L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
               +L+    +L KM +     N+V Y  +IDG  K    ++A  +   M EKG +PNV
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT++++IDG  KAG +D  + L+ EM  K   P+ V +T LI+     G++ E   L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 425 MLEAKI---------------------------------TPSVFTVSSLIHGLFKNGRIS 451
           M +                                     P++     LI    K GR+ 
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLE 905

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL    E    +       N  LY ++I +  Y  +I  A +LF DM  D + PD  T+
Sbjct: 906 VALELHKEVISASMSMTAKKN--LYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGI 539
             +L GL+R +R  + + L   + +M I
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 248/569 (43%), Gaps = 61/569 (10%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A  ++G   EAL +  K + +P     N +++GL +   F+   +F   M     + +V 
Sbjct: 285 ALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +L+  C  +  + +   +   MI +G  P+  I+  L+H  C  +    A  + + M
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 181 RECGVVPNLYTYNALMDGYCKVADV----------------------------------- 205
            +C   P    YN L+   C   ++                                   
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 206 ------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                  +A +  HEM+ +   P+  T+  ++  LC    +  A   F  M   GV P++
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y  LID   KAG + +A +   EM +    P V TY  LI       ++  A  L + 
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPN 363
           M  +G   NV+TY +LIDGYCK G++EKA  + ++M                     +PN
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+ +L+DG CKA  +  A  L   M +    P+ +V+ ALIDG  K   + E   ++ 
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+E    P+V+T SSLI  LFK+ R    L+  L+   K     C+PN V+Y  +I  L
Sbjct: 705 KMVERGYNPNVYTYSSLIDRLFKDKR----LDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
               +  +A KL   M     +P+  TYT M+ G  +A ++   + L  +M   G  P+ 
Sbjct: 761 SKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNF 820

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKES 572
           V   V++      G L  A+   E +K++
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQT 849



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 246/563 (43%), Gaps = 73/563 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           +A  E+G +++  + Y+     P     NAL+   ++  K D+    + EM   GL  D 
Sbjct: 224 VALEELGRLKD--FGYK-----PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T G      C  G   +AL+L ++   +   P  ++Y  +I GLC  +   EA      
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY  L+ G      + R       M+     P+   F  L+   CK  +
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDD 393

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL-----FE----------------- 277
              A      M K    P   VYN LI   C  G L     FE                 
Sbjct: 394 FSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN 453

Query: 278 -------AMSLCSEMEKFEIS-------------PDVFTYNILIKGLCGVGQLEGAEGLL 317
                  A  LC    KFE +             PD  TY+ +I  LC   ++E A  L 
Sbjct: 454 KVNVVSFARCLCG-FGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   G++ +V TY  LID + K G +++A +   +M   G EP VVT+++LI    KA
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKIT----- 431
             +  A  L+  M+ K   P+V+ +TALIDG  K GN+++  ++Y  M  +A I      
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632

Query: 432 ----------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
                     P+V T  +L+ GL K  ++ +A +  L +T   DG  C PN ++Y A+I 
Sbjct: 633 FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD--LLETMFVDG--CEPNTIVYDALID 688

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C   ++ +A ++F  M      P+  TY++++  L + KR+  V+ +L+ M++    P
Sbjct: 689 GFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748

Query: 542 DAVINQVMVRGYQENGDLKSAFR 564
           + VI   M+ G  +      A++
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYK 771



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 240/554 (43%), Gaps = 76/554 (13%)

Query: 72  LWVYRKI--EVLPAIQACNALLNGLIKKGKFDSV-WEFYEEM------VLCGLVADVVTY 122
           LW  R+I  +  PA+    ALL+ + ++G +D V  EF  E+      VL  L+      
Sbjct: 159 LWAGRQIGYDHTPAVYI--ALLD-VFERGSYDRVPEEFLREIRGDDKEVLGKLL------ 209

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            VLI  CC  G    AL     + D G +PT + Y  L+      +K+  A+ + R M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 183 CGV--------------------------------VPNLYTYNALMDGYCKVADVNRALE 210
            G+                                VPN   YN ++ G C+ +    A++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F + M   +  PNV T+ +L+ G     +L         M   G +P+  ++N L+  +C
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG------AEGLLQKMYKEG 324
           K+ +   A  L  +MEK E  P    YNILI  +C  G+L G      AE    +M   G
Sbjct: 390 KSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAG 449

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N V   S     C  G  EKA  V  +M   G  P+  T+S +I   C A  ++ A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM    +VPDV  +T LID  SK G +K+      EM+     P+V T ++LIH  
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-- 502
            K  ++S A   F     K     C PN + Y A+I   C  G I KA ++++ MR D  
Sbjct: 570 LKAKKVSVANELFELMIAKG----CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 503 ------------NL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
                       N+  +P+  TY  ++ GL +A ++ D   LL  M   G  P+ ++   
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 549 MVRGYQENGDLKSA 562
           ++ G+ +   L  A
Sbjct: 686 LIDGFCKAAKLDEA 699



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 7/246 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I   S++   +EA  +   +E     P +    A+++G  K GK D   E +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY VLI+ CC  G + +A  L +EM        V  Y  +I G   E
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT- 226
              + +  +   + + G  P +  Y  L+D + K   +  ALE + E++  ++       
Sbjct: 869 --FILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKN 926

Query: 227 -FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+       ++  A   F  M + GV P++  +  L+ G  +     EA+ L   +
Sbjct: 927 LYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986

Query: 286 EKFEIS 291
            + +I+
Sbjct: 987 CQMDIN 992


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 258/497 (51%), Gaps = 12/497 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + T++  F E G  + A  ++ ++    + P +   N L++ L KKG        +
Sbjct: 259 NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLF 318

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++++  G+  ++ T+ + I   C +G + +A+ L   +  +G+ P VV Y  +I GLC +
Sbjct: 319 DKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRK 378

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK---VADVNRALEFYHEMLHHNLQPNV 224
           +++VEAE     M   G  PN +TYN+++DGYCK   V D NR L+   + +    +P+ 
Sbjct: 379 SRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK---DAVFKGFKPDE 435

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  L++G C+ G+   A   F      G+ P+I VYN LI G C+ G +  A+ L +E
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +    PD++TYN++I GLC +G L  A  L+     +G + ++ TYN+L+DGYC++  
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A+ + ++M  +G+ P+V+T+++L++G CK    +  M ++  M  K   P+++ +  
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+ L     + E + L  EM    +TP V +  +LI G  K G +  A   F     + 
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           D    S     Y  II A      +  A +LFS+M+ +   PDN TY  ++ G  +   +
Sbjct: 676 D---VSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNV 732

Query: 525 LDVMMLLADMIKMGIVP 541
                 L + I+ G +P
Sbjct: 733 NQGYKFLLENIEKGFIP 749



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 273/577 (47%), Gaps = 78/577 (13%)

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+EA+  + ++++    P++ + NA++N L++ G F+   + Y  M    + +D
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 119 VVTYGVLIDCCCGQG-----------------------------------DVMKALNLFD 143
           V TY + I   C  G                                   D  +A  LFD
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM++  + P V  +  L+H LC +  ++E+E +F  + + GV PNL+T+N  + G CK  
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            ++RA+     +    L+P+VVT+  ++ GLC+   +  A      M   G  PN F YN
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +IDG+CK G + +A  +  +       PD FTY  L+ G C  G  + A  + +    +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  +++ YN+LI G C++G +  AL + ++M EKG +P++ T++ +I+G CK G +  A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L  + + K  +PD+  +  L+DG  +   +   + L   M    +TP V T ++L++G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K  +    +  F   T+K     C+PN + Y  II++LC   ++ +A  L  +M+S  
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKG----CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640

Query: 504 LRPDNCTYTTMLRGLLRA-------------KRMLDV----------------------- 527
           L PD  ++ T++ G  +              ++  DV                       
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMA 700

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + L ++M K G  PD    +V++ G+ + G++   ++
Sbjct: 701 LRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYK 737



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 197/364 (54%), Gaps = 4/364 (1%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +L+NG  + G  D     +++ +  GL   ++ Y  LI   C QG ++ AL L +EM +K
Sbjct: 440 SLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK 499

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G +P +  Y ++I+GLC    + +A  +       G +P+++TYN L+DGYC+   ++ A
Sbjct: 500 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 559

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E  + M    + P+V+T+  L++GLCK  +       F  M + G  PNI  YN +I+ 
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILA 327
            C +  + EA+ L  EM+   ++PDV ++  LI G C VG L+GA GL + M K+  +  
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
              TYN +I  + ++ +M+ AL + S+M + G +P+  T+  LIDG CK GN++      
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E + K  +P +  F  +++ L  +  ++E + +   M++  I P   TV+++     K 
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEAD-KK 796

Query: 448 GRIS 451
           G I+
Sbjct: 797 GHIT 800



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 39/443 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+  I    + G ++ A   L    +  + P +   N ++ GL +K +     E  
Sbjct: 329 NLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECL 388

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV  G   +  TY  +ID  C +G V+ A  +  + + KG +P    Y  L++G C +
Sbjct: 389 HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD 448

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               +A ++F+     G+ P++  YN L+ G C+   +  AL+  +EM     +P++ T+
Sbjct: 449 GDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTY 508

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            ++++GLCK+G L  A +        G  P+IF YN L+DG+C+   L  A+ L + M  
Sbjct: 509 NLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS 568

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PDV TYN L+ GLC   + E    + + M ++G   N++TYN++I+  C    + +
Sbjct: 569 QGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNE 628

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY-------------------- 387
           A+ +  +M  KG+ P+VV+F +LI G CK G++D A GL+                    
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688

Query: 388 ----------------TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                           +EM      PD   +  LIDG  K GN+ +  +   E +E    
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748

Query: 432 PSVFTVSSLIHGLFKNGRISNAL 454
           PS+ T   +++ L    ++  A+
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAV 771



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 178/377 (47%), Gaps = 9/377 (2%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL---CKVGEL 240
           G    L+TY +++         N       EM   NL  N +  GV ++ +    + G++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEM-RSNLD-NTLLEGVYVEAMRFYGRKGKI 171

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
           + A + F  M  F   P+++ YN +++   + G   +A  +   M+  ++  DV+TY I 
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           IK  C  G+   A  LL+ M   G  +N V Y +++ G+ + GD ++A  +  +M E  +
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+V TF+ L+   CK G +  +  L+ +++ + + P++  F   I GL K+G++   +R
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L   +    + P V T +++I GL +  R+  A     E   K   G   PN   Y +II
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE----ECLHKMVNGGFEPNDFTYNSII 407

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
              C  G ++ A+++  D      +PD  TY +++ G  +       M +  D +  G+ 
Sbjct: 408 DGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR 467

Query: 541 PDAVINQVMVRGYQENG 557
           P  ++   +++G  + G
Sbjct: 468 PSIIVYNTLIKGLCQQG 484


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 276/554 (49%), Gaps = 20/554 (3%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI    + G   EAL VYR++    + P+++  +AL+  L KK   + V   
Sbjct: 190 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVL 249

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   GL  +V T+ + I      G + +A  +F  M D+G  P +V YT+LI  LCN
Sbjct: 250 LKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 309

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++  A+ +F  M+  G  P+   Y  L+D +    D++   EF+ +M      P+VVT
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L+D LCK  +   A   F  M K G+ PN+  YN LI G  +AG + +A+ L   ME
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P  +TYNI I      G+   A    +KM  +GI+ N+V  N+ +    + G + 
Sbjct: 430 SVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLR 489

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A ++ + + E G+ P+ VT++ ++    K G +D A+ L +EM+     PDV+V  +LI
Sbjct: 490 EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L K G + E  +++  M + K++P+V T ++L+ GL K GR+  A+  F    +K   
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK-- 607

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             CSPN + +  ++   C + ++  A K+FS M   + +PD  TY T++ GL++  ++  
Sbjct: 608 --CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA------------FRCSEFLKESRI 574
                  + K  + PD V    ++ G  + G +  A            FR +    E  +
Sbjct: 666 AFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 575 GSSETEGHTTRSFL 588
           G +  E    ++ +
Sbjct: 725 GGTLVEAEMDKAII 738



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 242/531 (45%), Gaps = 9/531 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFD 101
           +I + +   + T+  A S  G + +   V  K+     VL A  + N L++ LI+ G   
Sbjct: 151 KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAY-SYNGLIHLLIQSGFCG 209

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              E Y  MV  GL   + TY  L+     + D    + L  EM D G+ P V  +TI I
Sbjct: 210 EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICI 269

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             L    K+ EA  +FR M + G  P+L TY  L+D  C    +  A E + +M  +  +
Sbjct: 270 RVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHK 329

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+ V +  L+D     G+L     F+  M   G  P++  +  L+D  CKA +  EA + 
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M K  I P++ TYN LI GL   G++E A  LL  M   G+     TYN  ID + K
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G+  KA+    +M  KG+ PN+V  ++ +    + G +  A  ++  +    L PD V 
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  ++   SK G + E + L  EM+     P V  V+SLI  L+K GR+  A   F    
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF---- 565

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+      SP  V Y  ++  L  +G++ KA +LF  M      P+  ++ T+L    + 
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             +   + + + M  M   PD +    ++ G  +   +  AF     LK+S
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS 676



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 242/530 (45%), Gaps = 16/530 (3%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           L ++E     P+ ++    I  F + G   +A+  + K++   ++P I ACNA L  L +
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+       +  +   GL  D VTY +++ C    G V +A+NL  EMI  G EP V++
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
              LI  L    ++ EA  MF  M++  + P + TYN L+ G  K   V +A+E +  M+
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                PN ++F  L+D  CK  E+  A   F  M      P++  YN +I G  K   + 
Sbjct: 605 EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILANVVTYNSL 335
            A     +++K  + PD  T   L+ GL   GQ+  A  + +  MY+     N   +  L
Sbjct: 665 HAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-S 394
           + G   E +M+KA+    ++   G+         L+   CK      A  ++ +   K  
Sbjct: 724 MGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL--IHGLFKNGRISN 452
           + P +  +  LI  L +    ++   L+K+M      P  FT + L  +HG  K+G+I+ 
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG--KSGKITE 841

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
               + E   +     C P+ + Y  +I +L     + KA   F D+ S + RP   TY 
Sbjct: 842 LFELYKEMISRR----CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++ GL +  R+ + M L  +M   G  P+  I  +++ GY + GD ++A
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 248/529 (46%), Gaps = 45/529 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++ ++  +S++G ++EA+ +  ++      P +   N+L++ L K G+ D  W+ ++ M
Sbjct: 509  TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                L   VVTY  L+     +G V KA+ LF+ MI+K   P  + +  L+   C  +++
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              A  MF  M      P++ TYN ++ G  K   VN A  F+H+ L  ++ P+ VT   L
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTL 687

Query: 231  MDGLCKVGELRAA---GNFFVHMAKFGVFPN-------------------IFVYNCLIDG 268
            + GL K G++  A      F++  +F V  +                   IF    +++G
Sbjct: 688  LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 269  HCKAGNLFEAMS--LCSE-------------MEKFEISPDVFTYNILIKGLCGVGQLEGA 313
             C+  +    +   LC                +K  ISP + +YN LI  L  V   E A
Sbjct: 748  ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L + M   G   +  T+N L+  + K G + +   +  +M  +  +P+ +T++ +I  
Sbjct: 808  WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              K+ N+D A+  + ++V     P    +  LIDGL+K G ++E +RL++EM +    P+
Sbjct: 868  LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
                + LI+G  K G    A   F    ++       P+   Y  ++  LC  G++ +A 
Sbjct: 928  CAIFNILINGYGKIGDTETACQLFKRMVNEG----IRPDLKSYTILVDCLCLAGRVDEAL 983

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
              F++++S  L PD   Y  ++ GL +++RM + + L  +M   GIVPD
Sbjct: 984  YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 223/464 (48%), Gaps = 12/464 (2%)

Query: 21   VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---- 76
            V   L+K  K +H  +  F+ L     P  +     TL+    + G I +A+ + R    
Sbjct: 653  VIYGLIKENKVNHA-FWFFHQLKKSMHP--DHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 77   KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
            ++           L+ G + + + D    F EE+VL G+  +      L+   C     +
Sbjct: 710  QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 137  KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  +FD+   K GI PT+  Y  LI  L   +   +A  +F+ M+  G  P+ +T+N L
Sbjct: 770  YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            +  + K   +    E Y EM+    +P+ +T+ +++  L K   L  A +FF  +     
Sbjct: 830  LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 256  FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             P    Y  LIDG  K G L EAM L  EM  +   P+   +NILI G   +G  E A  
Sbjct: 890  RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949

Query: 316  LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L ++M  EGI  ++ +Y  L+D  C  G +++AL   +++   G++P+ + ++ +I+G  
Sbjct: 950  LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 376  KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            K+  ++ A+ LY EM  + +VPD+  + +L+  L   G +++  R+Y+E+  A + P VF
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVF 1069

Query: 436  TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            T ++LI G   +    +A   +  K    DG  C+PN   YA +
Sbjct: 1070 TYNALIRGYSLSENPEHAYTVY--KNMMVDG--CNPNIGTYAQL 1109



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 216/449 (48%), Gaps = 4/449 (0%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +F+ M  K I   +  Y  +   L     + +  ++   MR+ G V N Y+YN L+    
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +      ALE Y  M+   L+P++ T+  LM  L K  +          M   G+ PN++
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +   I    +AG + EA  +   M+     PD+ TY +LI  LC  GQLE A+ L  KM
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   + V Y +L+D +   GD++      SQM   G  P+VVTF+ L+D  CKA + 
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A   +  M  + ++P++  +  LI GL + G +++ L+L   M    + P+ +T +  
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I    K+G    A+  F    +K       PN V   A + +L   G++ +A  +F+ +R
Sbjct: 444 IDYFGKSGETGKAVETF----EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            + L PD+ TY  M++   +  ++ + + LL++MI+ G  PD ++   ++    + G + 
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLG 589
            A++  + +K+ ++  +    +T  S LG
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 256/555 (46%), Gaps = 55/555 (9%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI +  + G ++EA  ++   + +++ P +   N LL+GL K+G+     E +E M
Sbjct: 544  VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +      + +++  L+DC C   +V  AL +F +M     +P V+ Y  +I+GL  ENK+
Sbjct: 604  IEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663

Query: 171  VEAESMFRSMRE---------CGVVPNLYT--------------------------YNAL 195
              A   F  +++         C ++P L                            +  L
Sbjct: 664  NHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK-VGELRAAGNFFVHMAKFG 254
            M G    A++++A+ F  E++ + +         L+  LCK   EL A   F     K G
Sbjct: 724  MGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 255  VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            + P +  YNCLI    +     +A  L  +M+    +PD FT+N+L+      G++    
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             L ++M       + +TYN +I    K  +++KAL     +      P   T+  LIDG 
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 375  CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
             K G ++ AM L+ EM      P+  +F  LI+G  K G+ +   +L+K M+   I P +
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             + + L+  L   GR+  AL +F E   K+ G    P+ + Y  II  L    ++ +A  
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNEL--KSTG--LDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 495  LFSDMRSDNLRPDNCTYTTM-----LRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQV 548
            L+++MR+  + PD  TY ++     L G++ +AKRM + + L       G+ PD      
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL------AGLEPDVFTYNA 1073

Query: 549  MVRGYQENGDLKSAF 563
            ++RGY  + + + A+
Sbjct: 1074 LIRGYSLSENPEHAY 1088



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 154/619 (24%), Positives = 269/619 (43%), Gaps = 64/619 (10%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCY----SVFNALNSLEIPK----------F 50
           L NA   +NA+ L   +  N     KP  V Y      FN    L+  K          +
Sbjct: 307 LCNAGQLENAKELFVKMKAN---GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            P V  F+ L+    +    +EA   +   RK  +LP +   N L+ GL++ G+ +   +
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
               M   G+     TY + ID     G+  KA+  F++M  KGI P +V     ++ L 
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA++MF  +RE G+ P+  TYN +M  Y KV  V+ A+    EM+ +  +P+V+
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
               L+D L K G +  A   F  M    + P +  YN L+ G  K G + +A+ L   M
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + + SP+  ++N L+   C   ++E A  +  KM       +V+TYN++I G  KE  +
Sbjct: 604 IEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-------VIKSLVPD 398
             A     Q+ +K + P+ VT  +L+ G  K G I  A+ +  +        V +S   D
Sbjct: 664 NHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722

Query: 399 V-------------VVFTA--LIDGLSKDGNM---------KETLRLYKEMLEAK----- 429
           +             ++F    +++G+ ++ +          K    LY   +  K     
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKL 782

Query: 430 -ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I+P++ + + LI  L +      A + F  K  K  G  C+P+   +  ++      G+
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLF--KDMKNVG--CAPDAFTFNMLLAVHGKSGK 838

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           I +  +L+ +M S   +PD  TY  ++  L ++  +   +    D++     P       
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 549 MVRGYQENGDLKSAFRCSE 567
           ++ G  + G L+ A R  E
Sbjct: 899 LIDGLAKVGRLEEAMRLFE 917



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 221/494 (44%), Gaps = 4/494 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           VL   + CN +L  L    K + +   +E M    +  D+ TY  +      +G + +  
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            + ++M   G       Y  LIH L       EA  ++R M   G+ P+L TY+ALM   
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D    +    EM    L+PNV TF + +  L + G++  A   F  M   G  P++
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  LID  C AG L  A  L  +M+     PD   Y  L+      G L+  +    +
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G + +VVT+  L+D  CK  D ++A +    M ++G+ PN+ T+++LI G  +AG 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I+ A+ L   M    + P    +   ID   K G   + +  +++M    I P++   ++
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            ++ L + GR+  A   F     + +G   +P+ V Y  +++     GQ+ +A  L S+M
Sbjct: 478 SLYSLAEMGRLREAKTMF--NGLRENG--LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
             +   PD     +++  L +A R+ +   +   M  M + P  V    ++ G  + G +
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRV 593

Query: 560 KSAFRCSEFLKESR 573
           + A    E + E +
Sbjct: 594 QKAIELFESMIEKK 607


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 273/514 (53%), Gaps = 10/514 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  L  A+S    + +AL+V  K++ L    +IQ  N+LL  L      + +W+ Y E+
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHS---NIMWDVYNEI 237

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + G      T  +++D  C Q     A+  F +   K  +P+VV +  ++   C    +
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+S F  M + G++P+ Y+YN L+ G C    +  AL+  ++M +H L+P++VT+ +L
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
             G   +G +  A N    M   G  PN+  Y  LI GHC+ GN+ EA+ L  EM     
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              + +  +L+  LC   Q++ A  L  +M   G+  +++TY++LI G CK+G++++A+ 
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M    + PN +   +++ G C+ G I  A   +  ++  +L  D++++  +IDG  
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN +E ++LYK++ E  I+P++ T +SL++G   N ++S A    L  T K  G    
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARR--LLDTIKLHG--LE 593

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y  ++   C +G +    +L S+M++  + P + TYT +++GL +  ++ +   L
Sbjct: 594 PNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQL 653

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L DM  +G+ PD V    +++ + +  D++ AF+
Sbjct: 654 LEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQ 687



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 257/512 (50%), Gaps = 7/512 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI      G + EAL +   +E   + P +   N L  G    G  +  W   ++M+
Sbjct: 319 YNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKML 378

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           + G   ++VTY VLI   C  G+V +AL L+ EMI  G + +++  T+L+  LC   ++ 
Sbjct: 379 IKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVD 438

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +F  M   G+ P+L TY+ L+ G CK  +V +A+  Y +M  + + PN +  G ++
Sbjct: 439 VAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+ G++  A  +F ++    +  +I +YN +IDG+ K GN  EA+ L  ++ +  IS
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P + T+N L+ G C   +L  A  LL  +   G+  N VTY +L++ YC+EG+M+  L +
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S+M  K + P  +T++ +I G CK   +  +  L  +M    L PD V +  +I    K
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             +M++  +LY +ML   + P+  T + LI+G    G + +A N  +   ++      + 
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRK----VNL 734

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  II+A C  G + KA   F  M           Y+ ++  L +   + +     
Sbjct: 735 NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             M+  G+ PD  + +V++  + + G L S F
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEF 826



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 237/450 (52%), Gaps = 19/450 (4%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  AL +  +M D     ++  Y  L++ L + N M +   ++  ++  G   + YT + 
Sbjct: 195 VHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD---VYNEIKVSGTPQSEYTSSI 251

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++DG C+ +    A+ F+ +      QP+VV+F  +M   CK+G +  A +FF  M K G
Sbjct: 252 VVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHG 311

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+ + YN LI G C AG++ EA+ L ++ME   + PD+ TYNIL KG   +G + GA 
Sbjct: 312 LLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAW 371

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            ++QKM  +G   N+VTY  LI G+C+ G++E+AL +  +M   G + ++++ + L+   
Sbjct: 372 NIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSL 431

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+  +D A  L+ EM    L PD++ ++ LI GL K G +++ + LY++M   +I P+ 
Sbjct: 432 CKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNS 491

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
               +++ GL + G+IS A  +F    D       S + +LY  +I      G   +A K
Sbjct: 492 LIHGAILMGLCEKGKISQARMYF----DYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 495 LFSDMRSDNLRPDNCTYTTML------RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           L+  +    + P   T+ +++      R L +A+R+LD + L       G+ P+AV    
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL------HGLEPNAVTYTT 601

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           ++  Y E G+++S       +K   IG + 
Sbjct: 602 LMNVYCEEGNMQSLLELLSEMKAKAIGPTH 631



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 199/378 (52%), Gaps = 3/378 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI    + G +++A+ +Y K+    ++P      A+L GL +KGK      +++ +
Sbjct: 458 TYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYL 517

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   L  D++ Y ++ID    +G+  +A+ L+ ++ +KGI PT+V +  L++G C   K+
Sbjct: 518 ITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKL 577

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +  +++  G+ PN  TY  LM+ YC+  ++   LE   EM    + P  +T+ V+
Sbjct: 578 SQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVV 637

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK  +L+ +      M   G+ P+   YN +I   CKA ++ +A  L  +M    +
Sbjct: 638 IKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNL 697

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P   TYNILI G C  G L+ A+ LL  +    +  N   Y ++I  +C +GD++KA+ 
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              QM EKG E ++  +S++I   CK   +  A   +  M+   + PD  +F  L++   
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817

Query: 411 KDGNMKETLRLYKEMLEA 428
           + G++     L  EM+++
Sbjct: 818 QCGHLNSEFELLAEMIKS 835



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 219/461 (47%), Gaps = 40/461 (8%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNG 93
           +N +  + I   NP++  ++ LI    ++G++EEAL +Y+++       +I +   LL  
Sbjct: 371 WNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGS 430

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  + D  ++ + EM   GL  D++TY  LI   C QG+V +A+ L+++M    I P 
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            +I+  ++ GLC + K+ +A   F  +    +  ++  YN ++DGY K  +   A++ Y 
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           ++    + P +VTF  LM G C   +L  A      +   G+ PN   Y  L++ +C+ G
Sbjct: 551 QLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEG 610

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM------------- 320
           N+   + L SEM+   I P   TY ++IKGLC   +L+ +  LL+ M             
Sbjct: 611 NMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYN 670

Query: 321 ------------------YKEGILANV----VTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
                             Y + +L N+    VTYN LI+G+C  GD++ A ++   +  +
Sbjct: 671 TIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            V  N   ++++I   C  G++D A+  + +MV K     +  ++A+I  L K   + E 
Sbjct: 731 KVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEA 790

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
              +  ML   + P       L++   + G +++      E
Sbjct: 791 KYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAE 831



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 201/423 (47%), Gaps = 7/423 (1%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +  + + V++ +L         + +A  +   M++   + ++ TYN+L+     +   N 
Sbjct: 173 RSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLL---YNLRHSNI 229

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
             + Y+E+       +  T  +++DGLC+    + A  FF         P++  +N ++ 
Sbjct: 230 MWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMS 289

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +CK G +  A S    M K  + PD ++YNILI GLC  G +  A  L   M   G+  
Sbjct: 290 RYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEP 349

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++VTYN L  G+   G +  A ++  +M  KG  PN+VT++ LI G C+ GN++ A+ LY
Sbjct: 350 DMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY 409

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+       ++  T L+  L K   +    +L+ EM    + P + T S+LIHGL K 
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +  A+  +    +K       PN +++ AI+  LC  G+I +A   F  + + NL  D
Sbjct: 470 GEVQQAILLY----EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLD 525

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
              Y  M+ G ++     + + L   + + GI P  V    ++ G+  N  L  A R  +
Sbjct: 526 IILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLD 585

Query: 568 FLK 570
            +K
Sbjct: 586 TIK 588



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 160/311 (51%), Gaps = 7/311 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I  + + G+  EA+ +Y+++    + P I   N+L+ G     K        + +
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI 587

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            L GL  + VTY  L++  C +G++   L L  EM  K I PT + YT++I GLC + K+
Sbjct: 588 KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKL 647

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E+  +   M   G+ P+  +YN ++  +CK  D+ +A + Y +ML HNL+P  VT+ +L
Sbjct: 648 QESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKF 288
           ++G C  G+L+ A N  V +    V  N + Y  +I  HC  G++ +A+    +M  + F
Sbjct: 708 INGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           E+S  +  Y+ +I  LC    +  A+     M  +G+  +   +  L++ + + G +   
Sbjct: 768 EVS--IRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSE 825

Query: 349 LSVCSQMTEKG 359
             + ++M + G
Sbjct: 826 FELLAEMIKSG 836



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 192/401 (47%), Gaps = 12/401 (2%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           FRS     VV     ++ L   Y + A V+ AL    +M   N   ++ T+  L+  L  
Sbjct: 172 FRSWDSSNVV-----WDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRH 226

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
              +    N    +   G   + +  + ++DG C+     +A+    + E  E  P V +
Sbjct: 227 SNIMWDVYN---EIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVS 283

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N ++   C +G ++ A+     M K G+L +  +YN LI G C  G M +AL + + M 
Sbjct: 284 FNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDME 343

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G+EP++VT++ L  G    G I+ A  +  +M+IK   P++V +T LI G  + GN++
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E L+LYKEM+      S+ + + L+  L K+ ++  A   F E     +     P+ + Y
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCE----MEANGLRPDLITY 459

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           + +I  LC  G++ +A  L+  M S+ + P++  +  +L GL    ++    M    +I 
Sbjct: 460 STLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLIT 519

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             +  D ++  +M+ GY + G+ + A +  + L E  I  +
Sbjct: 520 SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/592 (29%), Positives = 292/592 (49%), Gaps = 43/592 (7%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           +  ++ ++ L++ A  +I  +     +  K      S F+ L  +   + N   +S+L++
Sbjct: 109 LLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLM 168

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           + +++     A   YR++E    +  +     ++N L K G  ++   F  +++  G + 
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLL 228

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMVEAESM 176
           D      L+   C   ++  AL +FD M  +G   P  V Y+ILIHGLC   ++ EA  +
Sbjct: 229 DSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGL 288

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M E G  P+  TY  L+   C    +++A   + EM+    +PNV T+ VL+DGLC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR 348

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G++  A      M K G+FP++  YN LI+G+CK G +  A  L + MEK    P+V T
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N L++GLC VG+   A  LL++M   G+  ++V+YN LIDG C+EG M  A  + + M 
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG-------- 408
              +EP+ +TF+++I+  CK G  D A      M+ K +  D V  T LIDG        
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528

Query: 409 ---------------------------LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
                                      LSK   +KE L +  ++ +  + PSV T ++L+
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL ++G IS +  F + +  K  G  C PN   Y  II  LC  G++ +A KL S M+ 
Sbjct: 589 DGLIRSGDISGS--FRMLELMKLSG--CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             + P++ TYT M++G +   ++   +  +  M++ G   +  I   ++RG+
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 250/478 (52%), Gaps = 8/478 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            +  + ++L++ F    ++ +AL V+    R+    P   + + L++GL + G+ +  + 
Sbjct: 228 LDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFG 287

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++M   G      TY VLI   C +G + KA NLFDEMI +G +P V  YT+LI GLC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLC 347

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + K+ EA  + R M + G+ P++ TYNAL++GYCK   V  A E    M     +PNV 
Sbjct: 348 RDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TF  LM+GLC+VG+   A +    M   G+ P+I  YN LIDG C+ G++  A  L + M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM 467

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             F++ PD  T+  +I   C  G+ + A   L  M ++GI  + VT  +LIDG C  G  
Sbjct: 468 NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL +   + +  +     + + ++D   K   +   + +  ++    LVP VV +T L
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DGL + G++  + R+ + M  +   P+V+  + +I+GL + GR+  A       +   D
Sbjct: 588 VDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL---SAMQD 644

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            G  SPNHV Y  +++    +G++ +A +    M       ++  Y+++LRG + +++
Sbjct: 645 SGV-SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 223/493 (45%), Gaps = 40/493 (8%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y  M   G V  ++ Y  +++  C  G    A     +++  G      I T L+ G C 
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 167 ENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              + +A  +F  M RE    PN  +Y+ L+ G C+V  +  A     +M     QP+  
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ VL+  LC  G +  A N F  M   G  PN+  Y  LIDG C+ G + EA  +C +M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  I P V TYN LI G C  G++  A  LL  M K     NV T+N L++G C+ G  
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA+ +  +M + G+ P++V+++ LIDG C+ G+++ A  L T M    L PD + FTA+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+   K G           ML   I+    T ++LI G+   G+  +AL F LE   K  
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL-FILETLVKMR 541

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK--- 522
               +  H L   I+  L    ++ +   +   +    L P   TYTT++ GL+R+    
Sbjct: 542 --MLTTPHSL-NVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598

Query: 523 ---RMLDVM-----------------------------MLLADMIKMGIVPDAVINQVMV 550
              RML++M                              LL+ M   G+ P+ V   VMV
Sbjct: 599 GSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 551 RGYQENGDLKSAF 563
           +GY  NG L  A 
Sbjct: 659 KGYVNNGKLDRAL 671



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 216/436 (49%), Gaps = 13/436 (2%)

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR-SMRECGVVPNLYTYNALMDGYC 200
           +  M   G    ++ Y  +++ LC +N   EA  MF   + + G + + +   +L+ G+C
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALC-KNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFC 241

Query: 201 KVADVNRALEFYHEMLHHNL-QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           +  ++  AL+ +  M       PN V++ +L+ GLC+VG L  A      M + G  P+ 
Sbjct: 242 RGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  LI   C  G + +A +L  EM      P+V TY +LI GLC  G++E A G+ +K
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K+GI  +V+TYN+LI+GYCK+G +  A  + + M ++  +PNV TF+ L++G C+ G 
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A+ L   M+   L PD+V +  LIDGL ++G+M    +L   M    + P   T ++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481

Query: 440 LIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           +I+   K G+   A   L   L K    D        V    +I  +C  G+   A  + 
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLD-------EVTGTTLIDGVCNVGKTRDALFIL 534

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             +    +     +   +L  L +  ++ + + +L  + K+G+VP  V    +V G   +
Sbjct: 535 ETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594

Query: 557 GDLKSAFRCSEFLKES 572
           GD+  +FR  E +K S
Sbjct: 595 GDISGSFRMLELMKLS 610



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 198/410 (48%), Gaps = 6/410 (1%)

Query: 167 ENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           E +M++  S F  +RE  G   N   Y++L+    K+     A   Y  M        ++
Sbjct: 137 EKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  +++ LCK G   AA  F   + K G   +  +   L+ G C+  NL +A+ +   M
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLM 256

Query: 286 EK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
            +    +P+  +Y+ILI GLC VG+LE A GL  +M ++G   +  TY  LI   C  G 
Sbjct: 257 SREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++KA ++  +M  +G +PNV T++ LIDG C+ G I+ A G+  +MV   + P V+ + A
Sbjct: 317 IDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+G  KDG +     L   M +    P+V T + L+ GL + G+   A++      D  
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SP+ V Y  +I  LC +G +  A KL + M S +L PD  T+T ++    +  + 
Sbjct: 437 ----LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKA 492

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                 L  M++ GI  D V    ++ G    G  + A    E L + R+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 197/492 (40%), Gaps = 112/492 (22%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ LI      G IEEA  V RK+    + P++   NAL+NG  K G+    +E
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFE 392

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
               M       +V T+  L++  C  G   KA++L   M+D G+ P +V Y +LI GLC
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  M  A  +  SM    + P+  T+ A+++ +CK    + A  F   ML   +  + V
Sbjct: 453 REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512

Query: 226 TFGVLMDGLCKVGELRAAG------------------NFFVHMA---------------- 251
           T   L+DG+C VG+ R A                   N  + M                 
Sbjct: 513 TGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKI 572

Query: 252 -KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G+ P++  Y  L+DG  ++G++  +  +   M+     P+V+ Y I+I GLC  G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS- 369
           E AE LL  M   G+  N VTY  ++ GY   G +++AL     M E+G E N   +SS 
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692

Query: 370 ---------------------------------------LIDGQCKAGNIDAAMGLYTE- 389
                                                  L+   CK G  D + GL    
Sbjct: 693 LRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTI 752

Query: 390 --------------------------------MVIKS-LVPDVVVFTALIDGLSKDGNMK 416
                                           +V+KS  VP    F  +I GL K+G+ +
Sbjct: 753 LKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTE 812

Query: 417 ETLRLYKEMLEA 428
               L  E+L +
Sbjct: 813 RARELVMELLTS 824


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/503 (31%), Positives = 258/503 (51%), Gaps = 24/503 (4%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D   + YEEM++   V + +       C CG G   KA  +  EM+ KG  P    YT 
Sbjct: 398 LDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTK 457

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I  LC   ++ +A  +F+ M++ GV P++YTY  L+D +CK   + +A  ++ EM    
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG 517

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             PNVVT+  L+    K  +L  A + F  M     +PN   Y+ LIDG CKAG + +A 
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577

Query: 280 SLCSEM----------------EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            + +++                +   ISP+V TY  L+ GLC   ++  A  LL  M   
Sbjct: 578 EVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA 637

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   N + Y++L+DG+CK G+++ A  V  +MT+ G  P+V T++SLID   K G +D A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M + ++M+  S  P+VV +TA++DGL K G  ++ L L   M +   +P+V T ++LI G
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDG 757

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K G++   L  F++   KT G  C+PN+V Y  +I   C  G +  A  L  +M+  +
Sbjct: 758 LGKAGKVDAGLELFMQM--KTKG--CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTH 813

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                  Y T ++G   +KR L  + LL +M      P A +  +++  + + G L++A 
Sbjct: 814 WPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETAL 871

Query: 564 RCSEFLKE--SRIGSSETEGHTT 584
              + + E  S +  +  + HT+
Sbjct: 872 ELHKEMMEVSSSLNMASKDMHTS 894



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 258/523 (49%), Gaps = 30/523 (5%)

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +G  E+A  + +++     +P       ++  L +  + D  +  ++EM   G+  DV T
Sbjct: 430 VGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYT 489

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y +LID  C  G + +A + FDEM   G  P VV YT L+H      ++ +A  +F  M 
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML----------------HHNLQPNVV 225
                PN  TY+AL+DG CK  ++ +A E Y +++                   + PNVV
Sbjct: 550 GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVV 609

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G L++GLCK  ++  A +    M   G  PN  VY+ L+DG CK G +  A  +   M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    P V TY  LI  +   G+L+ A  +L +M K+    NVVTY +++DG CK G+ 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           EKAL++ S M +KG  PNVVT+++LIDG  KAG +DA + L+ +M  K   P+ V +  L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+     G + +   L  EM +      +    + + G  K    S  L   LE+ +  D
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGL---LEEMESHD 846

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM----RSDNLRPDNCTYTTMLRGLLRA 521
               +P   +Y  +I +    G++  A +L  +M     S N+   +  +T++++ L  +
Sbjct: 847 TAPIAP---VYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD-MHTSLIQALCLS 902

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            ++ + + L ++M + GIVPD      +V+G  E      A +
Sbjct: 903 SQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQ 945



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/538 (27%), Positives = 238/538 (44%), Gaps = 31/538 (5%)

Query: 40  NALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL 94
           +AL+ LE   F  +  + + +I    E     EA+    ++     +P +     LL G 
Sbjct: 257 DALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           +KK +          M+  G       +  L+   C   D   A  LF+ M   G  P  
Sbjct: 317 LKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGY 376

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           V+Y I I  +C   ++        AE ++  M     V N           C V    +A
Sbjct: 377 VVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM+     P+  T+  ++  LC+   +  A   F  M K GV P+++ Y  LID 
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A S   EM     SP+V TY  L+       QL  A  +  +M  +    N
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQM--TEKGVE--------------PNVVTFSSLID 372
            +TY++LIDG CK G+++KA  V +++  T   +E              PNVVT+ +L++
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVN 616

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKA  +  A  L   M+     P+ +V+ AL+DG  K G +     ++  M +    P
Sbjct: 617 GLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLP 676

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T +SLI  +FK+GR+  A+    +    +    C+PN V Y A++  LC  G+  KA
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS----CNPNVVTYTAMVDGLCKTGETEKA 732

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
             L S M      P+  TYT ++ GL +A ++   + L   M   G  P+ V  ++++
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 237/560 (42%), Gaps = 71/560 (12%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A  E+G +++  + YR     P+    NAL+  L   G+ +  +   +EM   G   D  
Sbjct: 188 ALEELGRLKD--FGYR-----PSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRS 240

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T G      C +G    AL+L +    +  +   V+ T +I GL   +   EA S    M
Sbjct: 241 TVGSFAQALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R    +PN+ TY  L+ G+ K   +       + M+     P+   F  L+   C   + 
Sbjct: 298 RCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDY 357

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDG-------------------------------- 268
             A   F  M   G  P   VYN  I                                  
Sbjct: 358 AYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNK 417

Query: 269 ---------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
                     C  G   +A  +  EM +    PD  TY  +I  LC   +++ A  L Q+
Sbjct: 418 INTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE 477

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K G+  +V TY  LID +CK G +E+A S   +M   G  PNVVT+++L+    K+  
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML------------E 427
           +  A  ++  MV  +  P+ + ++ALIDGL K G +++   +Y +++            E
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597

Query: 428 AK----ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            K    I+P+V T  +L++GL K  ++S+A +      D      C PN ++Y A++   
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLL----DAMLAAGCEPNQIVYDALVDGF 653

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+I  A ++F  M      P   TYT+++  + +  R+   M +L+ M+K    P+ 
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNV 713

Query: 544 VINQVMVRGYQENGDLKSAF 563
           V    MV G  + G+ + A 
Sbjct: 714 VTYTAMVDGLCKTGETEKAL 733



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 230/512 (44%), Gaps = 35/512 (6%)

Query: 90  LLNGLIKKGKFDSVW-EFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           LLN L+++     +W E  EE+      G     VTY  L+      G V  A  +  EM
Sbjct: 171 LLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEM 230

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
              G              LC E +  +A  +    RE   +  +     ++ G  + +  
Sbjct: 231 SASGFCMDRSTVGSFAQALCKEGRWGDALDLLE--REDFKLDTVLC-TQMISGLMEASLF 287

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N A+ F H M  ++  PNVVT+  L+ G  K  +L         M   G  P+  ++N L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE--GLLQKMYKE 323
           +  +C A +   A  L + M      P    YNI I  +CG  +L   E   L +K+Y+E
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEE 407

Query: 324 GILA----NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
            ++A    N +   +     C  G  EKA  +  +M  KG  P+  T++ +I   C+A  
Sbjct: 408 MLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKR 467

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A  L+ EM    + PDV  +T LID   K G +++    + EM  A  +P+V T ++
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+H   K+ ++  A + F     +  G  C PN + Y+A+I  LC  G+I KA ++++ +
Sbjct: 528 LLHAYLKSKQLYQANDIF----HRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583

Query: 500 ----------------RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
                            +D + P+  TY  ++ GL +A+++ D   LL  M+  G  P+ 
Sbjct: 584 IGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQ 643

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
           ++   +V G+ + G++ SA     FL+ ++ G
Sbjct: 644 IVYDALVDGFCKVGEIDSAQEV--FLRMTKCG 673


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 263/546 (48%), Gaps = 40/546 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN--------------- 92
           NP  F        E+GH+ EA  +  K+    ++  + +CNA L+               
Sbjct: 189 NPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKV 248

Query: 93  ------------------GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
                              L + GK         +M       DVV+Y  +ID  C  G+
Sbjct: 249 FCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE 308

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + KAL L D+M  KG++P    Y  +I  LC   K  EAE + R M    ++P+   Y  
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+ K+  V  A +++ EML   + P+ +T+  L+ G  + G++    N F  M   G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+   Y  LID +CKAG +  A SL +EM +  ++P++ TY  LI GLC  G+L+ A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M K+G+  NV  YNS+++G CK G++E+A+ +  +M   G++P+ +T++++ID  
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G+ID A  L  EM+ + L P VV F  L++G    G +++  RL   MLE  I P  
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++L+    K   I N++N   +   +      +P+   Y  +I+  C    + +A  
Sbjct: 609 ITYNTLM----KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+ +M      P   +Y  +++   + ++  +   L  +M   G+V D  I    V    
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 555 ENGDLK 560
           E GD++
Sbjct: 725 EEGDVE 730



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 195/377 (51%), Gaps = 3/377 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TLI  F ++GH+  A   + ++   ++ P       L+ G  + GK       + EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  D VTY  LID  C  G+++ A +L +EM+  G+ P +V Y  LI GLC   ++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   MR+ G+  N+  YN++++G CK  ++ +A++   EM    + P+ +T+  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D  C++G++  A      M   G+ P +  +N L++G C  G L +   L   M +  I
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYN L+K  C    +     + ++M  +G+  +  TYN LI G+CK  ++++A  
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EKG  P V ++++LI    K      A  L+ EM    LV D  ++   +D   
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCY 724

Query: 411 KDGNMKETLRLYKEMLE 427
           ++G+++ TL L  E +E
Sbjct: 725 EEGDVEITLNLCDEAIE 741



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 182/353 (51%), Gaps = 5/353 (1%)

Query: 49  KFNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           K +P    ++TLI  F + G + E   ++ ++    + P       L++   K G+  + 
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +  + EMV  G+  ++VTYG LID  C  G++  A  L DEM  KG++  V IY  +++G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           +C    + +A  + + M   G+ P+  TY  ++D YC++ D+++A +   EML   LQP 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVTF VLM+G C +G L         M + G+ P+   YN L+  HC   ++     +  
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M    ++PD  TYNILIKG C    L+ A  L ++M ++G +  V +YN+LI  + K+ 
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              +A  +  +M   G+  +   ++  +D   + G+++  + L  E + K L+
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 213/424 (50%), Gaps = 8/424 (1%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  + + I    L     + EA  +   +   G+V  + + NA +    ++A+ +  +E 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEM 244

Query: 212 YHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
             ++   + +  N  ++ +++  LC++G+++ A    + M      P++  Y+ +IDG+C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G L +A+ L  +M+   + P+ +TYN +I  LC +G+   AE +L++M  + I+ + V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y +LI G+ K G +  A     +M  K + P+ +T+++LI G  + G +     L+ EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + + L PD V +T LID   K G M     L+ EM++  +TP++ T  +LI GL K+G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A N  L++  K        N  +Y +++  +C  G I +A KL  +M    + PD  T
Sbjct: 485 DTA-NELLDEMRKKG---LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           YTT++    R   +     LL +M+  G+ P  V   V++ G+   G L+   R   ++ 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 571 ESRI 574
           E  I
Sbjct: 601 EKGI 604



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 182/372 (48%), Gaps = 19/372 (5%)

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +A V+  L   HE++H     + +  GV M             +  ++  K+   PN   
Sbjct: 143 IAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFT---------HRLIYTYKYWG-PNPIA 192

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           ++       + G+L EA  L  ++  + +   V + N  +  +      EG E  ++   
Sbjct: 193 FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN--NSEGIEMAIKVFC 250

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + GI  N  +YN +I   C+ G +++A  +  QM  +   P+VV++S++IDG C  G + 
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L  +M IK L P+   + ++I  L K G   E  ++ +EM+  KI P     ++LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HG FK G +  A  +F E   K      SP+++ Y  +IQ     G++++   LF +M S
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKK----ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L+PD  TYTT++    +A  M++   L  +M++MG+ P+ V    ++ G  ++G+L +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486

Query: 562 AFRCSEFLKESR 573
           A   +E L E R
Sbjct: 487 A---NELLDEMR 495


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 252/491 (51%), Gaps = 14/491 (2%)

Query: 66  GHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +EE L    ++     +P + AC +L+ G  + GK        E +   G V DV+TY
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMFRSM- 180
            VLI   C  G++ KAL + + M    + P VV Y  ++  LC+  K+ EA E + R M 
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQ 237

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           REC   P++ TY  L++  C  + V +A++   EM     +P+VVT+ VL++G+CK G L
Sbjct: 238 REC--YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A  F  +M  +G  PN+  +N ++   C  G   +A  L ++M +   SP V T+NIL
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC    L  A  +L+KM K G + N ++YN L+ G+C+E  M++A+     M  +G 
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P++VT+++L+   CK G  DAA+ +  ++  K   P ++ +  +IDGL+K G  +    
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L +EM    + P + T S+L+ GL   G++  A+  F +     +G    P+ V Y AI+
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD----MEGLSIKPSAVTYNAIM 531

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC   Q  +A    + M     +P   TYT ++ G+       + + LL ++   G V
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFV 591

Query: 541 PDAVINQVMVR 551
             +   QV V+
Sbjct: 592 KKSSAEQVAVK 602



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 223/431 (51%), Gaps = 10/431 (2%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           ++LI  F   G   +A  +   +E    +P +   N L+ G  K G+ D   +  E M  
Sbjct: 146 TSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM-- 203

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +  DVVTY  ++   C  G + +A+ + D  + +   P V+ YTILI   CN++ + +
Sbjct: 204 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ 262

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +   MR+ G  P++ TYN L++G CK   ++ A++F + M  +  QPNV+T  +++ 
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            +C  G    A      M + G  P++  +N LI+  C+   L  A+ +  +M K    P
Sbjct: 323 SMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  +YN L+ G C   +++ A   L+ M   G   ++VTYN+L+   CK+G  + A+ + 
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           +Q++ KG  P ++T++++IDG  K G  + A  L  EM  K L PD++ ++ L+ GL  +
Sbjct: 443 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCE 502

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E ++++ +M    I PS  T ++++ GL K  + S A++F     +K     C P 
Sbjct: 503 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG----CKPT 558

Query: 473 HVLYAAIIQAL 483
              Y  +I+ +
Sbjct: 559 KATYTILIEGI 569



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 196/391 (50%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ LI  + + G I++AL V  ++ V P +   N +L  L   GK     E  +  +  
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR 238

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C    V +A+ L DEM  KG +P VV Y +LI+G+C E ++ EA
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                +M   G  PN+ T+N ++   C       A     +ML     P+VVTF +L++ 
Sbjct: 299 IKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINF 358

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+   L  A +    M K G  PN   YN L+ G C+   +  A+     M      PD
Sbjct: 359 LCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 418

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+  LC  G+ + A  +L ++  +G    ++TYN++IDG  K G  E A  +  
Sbjct: 419 IVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+S+L+ G    G +D A+ ++ +M   S+ P  V + A++ GL K  
Sbjct: 479 EMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQ 538

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                +     M+E    P+  T + LI G+
Sbjct: 539 QTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 198/409 (48%), Gaps = 13/409 (3%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           I +  L    ++ E       M   G +P++    +L+ G+C+     +A      + + 
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              P+V+T+ VL+ G CK GE+  A      M+   V P++  YN ++   C +G L EA
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEA 228

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           M +     + E  PDV TY ILI+  C   GVGQ   A  LL +M K+G   +VVTYN L
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ---AMKLLDEMRKKGCKPDVVTYNVL 285

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G CKEG +++A+   + M   G +PNV+T + ++   C  G    A  L  +M+ K  
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P VV F  LI+ L +   +   + + ++M +    P+  + + L+HG  +  ++  A+ 
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +      +     C P+ V Y  ++ ALC DG+   A ++ + + S    P   TY T++
Sbjct: 406 YLEIMVSRG----CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            GL +  +      LL +M + G+ PD +    ++RG    G +  A +
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 7/256 (2%)

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           F  NI ++ L   G+LE     L++M  +G + +V+   SLI G+C+ G   KA  +   
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +   G  P+V+T++ LI G CK+G ID A+ +   M   S+ PDVV +  ++  L   G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +KE + +    ++ +  P V T + LI     +  +  A+    E   K     C P+ V
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG----CKPDVV 280

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I  +C +G++ +A K  ++M     +P+  T+  +LR +    R +D   LLADM
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM 340

Query: 535 IKMGIVPDAVINQVMV 550
           ++ G  P  V   +++
Sbjct: 341 LRKGCSPSVVTFNILI 356


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 269/546 (49%), Gaps = 27/546 (4%)

Query: 2   FY-VLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           FY VL N  +  N   L++    ++++ R  H V                  S F+ LI 
Sbjct: 170 FYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDV------------------STFNILIK 211

Query: 61  AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  +   +  A+ +  ++    + P       ++ G I+ G  D      E+MV  G   
Sbjct: 212 ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPC 271

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
             VT  VLI+  C QG + +AL+   E + +G  P    Y  L++GLC       A  + 
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            +M   G+ P++YTYN+L+ G CK+ ++  A++   +M+  +  PN VT+  ++  LCK 
Sbjct: 332 DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKE 391

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A      +   G+ P++  +N LI G C + N   AM L  EM+     PD FTY
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N+LI  LC   +LE A  LL++M   G   NVV YN+LIDG+CK   +E+A  +  +M  
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +GV  + VT+++LIDG CK+  ++ A  L  +M+++ L PD   + +L+    K G++K+
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              + + M  +   P + T ++LI GL K GR+  A      ++ +  G   +P+   Y 
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL--RSIQMKGMVLTPHA--YN 627

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML-DVMMLLADMIK 536
            +IQAL    +  +A +LF +M   +  PD  TY  + RGL      + + +    +MI+
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIE 687

Query: 537 MGIVPD 542
            G +P+
Sbjct: 688 RGNIPE 693



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 244/487 (50%), Gaps = 16/487 (3%)

Query: 56  STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  F + G I++AL   ++       P     N L+NGL K G      E  + M+L
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL  D+ TY  LI   C  G++ +A+ + D+M+ +   P  V Y  +I  LC EN++ E
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   G++P++ T+N+L+ G C  ++   A++ + EM     +P+  T+ +L+D
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID 456

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC   +L  A N    M   G   N+ +YN LIDG CK   + EA  +  EME   +S 
Sbjct: 457 SLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSR 516

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  TYN LI GLC   ++E A  L+ +M  EG+  +  TYNSL+  +CK GD++KA  + 
Sbjct: 517 DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G  P++VT+++LI G CKAG +  A  L   + +K +V     +  +I  L K 
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKR 636

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
               E +RL++EML+    P   T   +  GL    G I  A++F +E  ++ +     P
Sbjct: 637 NRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGN----IP 692

Query: 472 NHVLYAAIIQALC---YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
               +  + + LC    D  ++K   +  +    + R       + +RG L+ ++  D +
Sbjct: 693 EFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSERE-----ISTIRGFLKIRKFQDAL 747

Query: 529 MLLADMI 535
             L  ++
Sbjct: 748 STLGGIL 754



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 250/524 (47%), Gaps = 20/524 (3%)

Query: 48  PKFNP-SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P F P  +  TL     E+  +    W  ++   +P+      +L  L K G F+ +   
Sbjct: 60  PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 119

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI--------DKGIEPTVVIYT 158
            EEM L G   D   + + ++             L+DE++        +  I+P    Y 
Sbjct: 120 LEEMKLSGCEFDRGIFLIFVES-------YGKFELYDEVVGIVKVMEDEYRIKPDTRFYN 172

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +L++ L + NK+   ES   SM    +  ++ T+N L+   CK   V  A+    EM  +
Sbjct: 173 VLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSY 232

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L P+  TF  +M G  + G L  A      M ++G        N LI+G CK G + +A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +S   E       PD FTYN L+ GLC +G  + A  ++  M   G+  ++ TYNSLI G
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G++E+A+ +  QM  +   PN VT++++I   CK   +D A  +   +  K ++PD
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPD 412

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  F +LI GL    N K  + L++EM      P  FT + LI  L  + ++  ALN   
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   + +G  C+ N V+Y  +I   C + +I +A ++F +M    +  D+ TY T++ GL
Sbjct: 473 EM--ELNG--CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++KR+ D   L+  MI  G+ PD      ++  + + GD+K A
Sbjct: 529 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKA 572



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 245/500 (49%), Gaps = 4/500 (0%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           +V   +++  +++  +E A     +  +   +   N L+  L K  +        EEM  
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL  D  T+  ++      G++  AL + ++M++ G   T V   +LI+G C + ++ +
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A S  +     G  P+ +TYN L++G CK+     A+E    ML   L P++ T+  L+ 
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLIS 351

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK+GE+  A      M      PN   YN +I   CK   + EA  +   +    I P
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV T+N LI+GLC     + A  L ++M  +G   +  TYN LID  C    +E+AL++ 
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M   G   NVV +++LIDG CK   I+ A  ++ EM ++ +  D V +  LIDGL K 
Sbjct: 472 KEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             +++  +L  +M+   + P  FT +SL+    K G I  A +    +T  + G  C+P+
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV--QTMTSSG--CNPD 587

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V YA +I  LC  G++  AS+L   ++   +      Y  +++ L +  R  + M L  
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 533 DMIKMGIVPDAVINQVMVRG 552
           +M+     PDA+  +++ RG
Sbjct: 648 EMLDKSEPPDAITYKIVYRG 667



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 243/496 (48%), Gaps = 8/496 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVW 104
           +F+  +F   + ++ +    +E + + + +E    + P  +  N LLN L+   K   V 
Sbjct: 129 EFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVE 188

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +  MV   +  DV T+ +LI   C    V  A+ + +EM   G+ P    +T ++ G 
Sbjct: 189 SAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGY 248

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                +  A  +   M E G      T N L++G+CK   +++AL F  E +    +P+ 
Sbjct: 249 IEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQ 308

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  L++GLCK+G  + A      M   G+ P+I+ YN LI G CK G + EA+ +  +
Sbjct: 309 FTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQ 368

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   + SP+  TYN +I  LC   +++ A  + + +  +GIL +V T+NSLI G C   +
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A+ +  +M  KG  P+  T++ LID  C +  ++ A+ L  EM +     +VV++  
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG  K+  ++E   ++ EM    ++    T ++LI GL K+ R+ +A        D+ 
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLM----DQM 544

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 P+   Y +++   C  G I KA+ +   M S    PD  TY T++ GL +A R+
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604

Query: 525 LDVMMLLADMIKMGIV 540
                LL  +   G+V
Sbjct: 605 QVASRLLRSIQMKGMV 620



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 170/387 (43%), Gaps = 6/387 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAG 244
           +P  +T   L++   +  D   AL  ++      N  P+   +  ++  L K G      
Sbjct: 58  LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKG 303
                M   G   +  ++   ++ + K     E + +   ME ++ I PD   YN+L+  
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           L    +L+  E     M +  I  +V T+N LI   CK   +  A+ +  +M   G+ P+
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             TF++++ G  + GN+D A+ +  +MV        V    LI+G  K G + + L   +
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           E +     P  FT ++L++GL K G   +A+    E  D    G   P+   Y ++I  L
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM----EVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+I +A K+   M S +  P+  TY  ++  L +  R+ +   +   +   GI+PD 
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLK 570
                +++G   + + KSA    E +K
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMK 440



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 13/338 (3%)

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLF 276
           H+L P+  T   L++ L +  +  AA   F   +K   F P+  VY  ++    KAG+ F
Sbjct: 56  HHLPPDF-TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGS-F 113

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE---GLLQKMYKE-GILANVVTY 332
           E M     +E+ ++S   F   I +  +   G+ E  +   G+++ M  E  I  +   Y
Sbjct: 114 EYMRRV--LEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFY 171

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N L++       ++   S  S M  + +  +V TF+ LI   CKA  +  A+ +  EM  
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             L PD   FT ++ G  + GN+   LR+ ++M+E     +  TV+ LI+G  K GRI  
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           AL+F  E   +   G+  P+   Y  ++  LC  G    A ++   M    L PD  TY 
Sbjct: 292 ALSFIQEAVSE---GF-RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +++ GL +   + + + +L  M+     P+AV    ++
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAII 385



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 47/101 (46%)

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  ++  L    ++       S M    +R D  T+  +++ L +A ++   +++
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + +M   G+ PD      +++GY E G+L  A R  E + E
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 243/456 (53%), Gaps = 12/456 (2%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           +P   P   +TLI  F  +G   +A  +   +E    +P +   N +++G  K G+ ++ 
Sbjct: 134 VPDIIPC--TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               + M    +  DVVTY  ++   C  G + +A+ + D M+ +   P V+ YTILI  
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C ++ +  A  +   MR+ G  P++ TYN L++G CK   ++ A++F ++M     QPN
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+T  +++  +C  G    A      M + G  P++  +N LI+  C+ G L  A+ +  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M +    P+  +YN L+ G C   +++ A   L++M   G   ++VTYN+++   CK+G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E A+ + +Q++ KG  P ++T++++IDG  KAG    A+ L  EM  K L PD + ++
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+ GLS++G + E ++ + E     I P+  T +S++ GL K+ +   A++F +   ++
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                C PN   Y  +I+ L Y+G   +A +L +++
Sbjct: 549 G----CKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 239/468 (51%), Gaps = 7/468 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I  C  L+ G  + GK     +  E +   G V DV+TY V+I   C  G++  AL+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D M    + P VV Y  ++  LC+  K+ +A  +   M +    P++ TY  L++  C
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           + + V  A++   EM      P+VVT+ VL++G+CK G L  A  F   M   G  PN+ 
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N ++   C  G   +A  L ++M +   SP V T+NILI  LC  G L  A  +L+KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G   N ++YN L+ G+CKE  M++A+    +M  +G  P++VT+++++   CK G +
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ +  ++  K   P ++ +  +IDGL+K G   + ++L  EM    + P   T SSL
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL + G++  A+ FF E     +     PN V + +I+  LC   Q  +A      M 
Sbjct: 491 VGGLSREGKVDEAIKFFHE----FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +   +P+  +YT ++ GL       + + LL ++   G++  +   QV
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 245/484 (50%), Gaps = 10/484 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  +++ G+ +  ++F E MV  G V D++    LI   C  G   KA  + + +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P V+ Y ++I G C   ++  A S+   M    V P++ TYN ++   C    + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E    ML  +  P+V+T+ +L++  C+   +  A      M   G  P++  YN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK G L EA+   ++M      P+V T+NI+++ +C  G+   AE LL  M ++G   
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VVT+N LI+  C++G + +A+ +  +M + G +PN ++++ L+ G CK   +D A+   
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             MV +   PD+V +  ++  L KDG +++ + +  ++     +P + T +++I GL K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G+   A+    E   K       P+ + Y++++  L  +G++ +A K F +     +RP+
Sbjct: 463 GKTGKAIKLLDEMRAKD----LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T+ +++ GL ++++    +  L  MI  G  P+     +++ G    G  K A    E
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL---E 575

Query: 568 FLKE 571
            L E
Sbjct: 576 LLNE 579



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 199/410 (48%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ +I  + + G I  AL V  ++ V P +   N +L  L   GK     E  + M+  
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
               DV+TY +LI+  C    V  A+ L DEM D+G  P VV Y +L++G+C E ++ EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 M   G  PN+ T+N ++   C       A +   +ML     P+VVTF +L++ 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L  A +    M + G  PN   YN L+ G CK   +  A+     M      PD
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN ++  LC  G++E A  +L ++  +G    ++TYN++IDG  K G   KA+ +  
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  K ++P+ +T+SSL+ G  + G +D A+  + E     + P+ V F +++ GL K  
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
                +     M+     P+  + + LI GL   G    AL    E  +K
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 173/334 (51%)

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           S +GH  + L   R     P +   N L+NG+ K+G+ D   +F  +M   G   +V+T+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +++   C  G  M A  L  +M+ KG  P+VV + ILI+ LC +  +  A  +   M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G  PN  +YN L+ G+CK   ++RA+E+   M+     P++VT+  ++  LCK G++  
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      ++  G  P +  YN +IDG  KAG   +A+ L  EM   ++ PD  TY+ L+ 
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G+++ A     +  + GI  N VT+NS++ G CK    ++A+     M  +G +P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           N  +++ LI+G    G    A+ L  E+  K L+
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 195/391 (49%), Gaps = 10/391 (2%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  ++    +F   M++H   P+++    L+ G C++G+ R A      +   G  P++ 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN +I G+CKAG +  A+S+   +++  +SPDV TYN +++ LC  G+L+ A  +L +M
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            +     +V+TY  LI+  C++  +  A+ +  +M ++G  P+VVT++ L++G CK G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+    +M      P+V+    ++  +   G   +  +L  +ML    +PSV T + L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+ L + G +  A++  LEK  +     C PN + Y  ++   C + ++ +A +    M 
Sbjct: 351 INFLCRKGLLGRAID-ILEKMPQHG---CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           S    PD  TY TML  L +  ++ D + +L  +   G  P  +    ++ G  + G   
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            A +    L E R    + +  T  S +G L
Sbjct: 467 KAIK---LLDEMRAKDLKPDTITYSSLVGGL 494



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 7/228 (3%)

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V  N+ +    + G++E+       M   G  P+++  ++LI G C+ G    A  +   
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +     VPDV+ +  +I G  K G +   L +   M    ++P V T ++++  L  +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A+   L++  + D   C P+ + Y  +I+A C D  +  A KL  +MR     PD  
Sbjct: 220 LKQAME-VLDRMLQRD---CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           TY  ++ G+ +  R+ + +  L DM   G  P+ + + +++R     G
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 42/558 (7%)

Query: 46  EIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
           EI    P++  ++TLI A+ +   +EE+  +Y+K+    ++P +  C+++L G  + GK 
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
                 + EM   GL  + V+Y  +I+     G VM+A NL  +M+ +GI   +V  T +
Sbjct: 373 TEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           + GL    K  EAE +F ++ +  + PN  TY+AL+DGYCK+  +  A     +M   ++
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PNV+TF  +++G  K G L  A +    M +  V PN  VY  LIDG+ KAG    A  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
            C EM+   +      ++IL+  L  VG+++ A  L+  MY +GI  ++V Y SLIDGY 
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYF 612

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG+   ALS+  +M EK +  +VV +++LI G  + G  D    + + M+   L PD +
Sbjct: 613 KEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCI 671

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF-FL- 458
            +  +I+     G  ++ L +  EM    I P+  T + LI GL K G +   +   FL 
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLV 731

Query: 459 ------EKTDKTDGGY------------------------CSPNHVLYAAIIQALCYDGQ 488
                 EK DK    +                         S + V Y A+I+  C    
Sbjct: 732 KAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSH 791

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGL----LRAKRMLDVMMLLADMIKMGIVPDAV 544
           + KA K +S M  D + P+  TY T+L GL    L  + M +   L+++M + G+VP+A 
Sbjct: 792 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAA 851

Query: 545 INQVMVRGYQENGDLKSA 562
              ++V GY   G+ K  
Sbjct: 852 TYDILVSGYGRVGNRKKT 869



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 262/542 (48%), Gaps = 28/542 (5%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  F+  G + +   +Y  +    V+P + + N L++ L K G  D    +     
Sbjct: 97  WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND 156

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +  +  D VTY  +I   C +G V +   L  EM+ +G+    +   IL+ G C    + 
Sbjct: 157 VVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +  ++ + GV  ++   N L+DGYC+   +++A E        +++ ++VT+  L+
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 232 DGLCKVGELRAAGNFFVHMAKF-------------------GVFPNIFVYNCLIDGHCKA 272
              CK G+L  A + F  +  F                    + P +  Y  LI  +CK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + E+ SL  +M    I PDV T + ++ G C  G+L  A  L ++MY+ G+  N V+Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            ++I+   K G + +A ++ SQM  +G+  ++VT ++++DG  K G    A  ++  ++ 
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            +L P+ V ++AL+DG  K G M+    + ++M +  + P+V T SS+I+G  K G +S 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A++   E   +       PN ++YA +I      G+   A     +M+S  L   N  + 
Sbjct: 515 AVDVLREMVQRN----VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 570

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +L  L R  RM +   L+ DM   GI PD V    ++ GY + G+  +A    + +KE 
Sbjct: 571 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630

Query: 573 RI 574
            I
Sbjct: 631 NI 632



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 256/541 (47%), Gaps = 26/541 (4%)

Query: 52  PSVFSTLIIAFS--EMGHIEEALWVYRKIEVLPAIQAC-NALLNGLIKKGKFDSVWEFYE 108
           P VFS  ++  S  ++G ++ AL   R  +V+       N ++ G  +KG  D  +    
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLS 186

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EMV  GL  D +T  +L+   C  G V  A  +   ++D G+   V+    LI G C   
Sbjct: 187 EMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAV 246

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH----------- 217
            M +A  +  +     V  ++ TYN L+  +CK  D+ RA   ++E+L            
Sbjct: 247 LMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306

Query: 218 --------HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                    NLQP +VT+  L+   CK   +  + + +  M   G+ P++   + ++ G 
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C+ G L EA  L  EM +  + P+  +Y  +I  L   G++  A  L  +M   GI  ++
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT  +++DG  K G  ++A  V   + +  + PN VT+S+L+DG CK G ++ A  +  +
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + + P+V+ F+++I+G +K G + + + + +EM++  + P+    + LI G FK G 
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
              A +F  E   +        ++V++  ++  L   G++ +A  L  DM S  + PD  
Sbjct: 547 QDVADDFCKEMKSRR----LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIV 602

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            Y +++ G  +    L  + ++ +M +  I  D V    +++G    G     + CS  +
Sbjct: 603 NYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI 662

Query: 570 K 570
           +
Sbjct: 663 E 663



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 229/458 (50%), Gaps = 51/458 (11%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+  + ++G +E A  V +K+E   V P +   ++++NG  KKG      +  
Sbjct: 460 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 519

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV   ++ + + Y +LID     G+   A +   EM  + +E + VI+ IL++ L   
Sbjct: 520 REMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 579

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA S+   M   G+ P++  Y +L+DGY K  +   AL    EM   N++ +VV +
Sbjct: 580 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 639

Query: 228 GVLMDGLCKVGELRAAGNFFV--HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             L+ GL ++G+       +V   M + G+ P+   YN +I+ +C  G   +A+ + +EM
Sbjct: 640 NALIKGLLRLGKYDPR---YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696

Query: 286 EKFEISPDVFTYNILIKGLCGVG----------------QLEGAEGLLQ----------- 318
           + + I P+  TYNILI GLC  G                + E A+ +LQ           
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 756

Query: 319 ---------KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                    +M K GI A++VTYN+LI GYC    +EKAL   SQM   G+ PN+ T+++
Sbjct: 757 LKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 816

Query: 370 LIDGQCKAG----NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           L+ G   AG     ++    L +EM  + LVP+   +  L+ G  + GN K+T+ L+ EM
Sbjct: 817 LLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEM 876

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEK 460
           +     P++ T + LI    K+G++  A   LN  L K
Sbjct: 877 ITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 914



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 216/437 (49%), Gaps = 30/437 (6%)

Query: 150 IEPT-----VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           I PT     V  +  LI      ++   A + F  MR  G+VP L  +N L+  +     
Sbjct: 50  IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V++    Y +ML   + P+V +  VL+  LCKVG+L  A  +  +     +  +   YN 
Sbjct: 110 VSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNT 167

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I G C+ G + +   L SEM K  +  D  T NIL+KG C +G ++ AE ++  +   G
Sbjct: 168 VIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGG 227

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +V+  N+LIDGYC+   M +A  +        V+ ++VT+++L+   CK G++  A 
Sbjct: 228 VTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287

Query: 385 GLYTEMV-------------------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            L+ E++                   IK+L P +V +T LI    K   ++E+  LYK+M
Sbjct: 288 SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   I P V T SS+++G  ++G+++ A   F E  +        PNHV YA II +L  
Sbjct: 348 IMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG----LDPNHVSYATIINSLFK 403

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G++++A  L S M    +  D  T TT++ GL +  +  +   +   ++K+ + P+ V 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 546 NQVMVRGYQENGDLKSA 562
              ++ GY + G ++ A
Sbjct: 464 YSALLDGYCKLGKMELA 480



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 244/499 (48%), Gaps = 27/499 (5%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +F +    +  M   GLV  +  +  L+      G V +   ++ +M+  G+ P V    
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVP-NLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           +L+H LC   K+ + +     +R   VV  +  TYN ++ G+C+   V++      EM+ 
Sbjct: 134 VLVHSLC---KVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVK 190

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L  + +T  +L+ G C++G ++ A     ++   GV  ++   N LIDG+C+A  + +
Sbjct: 191 RGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQ 250

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM---YKE----------- 323
           A  L     + ++  D+ TYN L+K  C  G L  AE L  ++   +K+           
Sbjct: 251 ATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVT 310

Query: 324 -----GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                 +   +VTY +LI  YCK   +E++ S+  +M   G+ P+VVT SS++ G C+ G
Sbjct: 311 QNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHG 370

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L+ EM    L P+ V +  +I+ L K G + E   L  +M+   I+  + T +
Sbjct: 371 KLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCT 430

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +++ GLFK G+   A   F E   K +    +PN V Y+A++   C  G++  A  +   
Sbjct: 431 TVMDGLFKVGKTKEAEEVF-ETILKLN---LAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M  +++ P+  T+++++ G  +   +   + +L +M++  ++P+ ++  +++ GY + G+
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 559 LKSAFRCSEFLKESRIGSS 577
              A    + +K  R+  S
Sbjct: 547 QDVADDFCKEMKSRRLEES 565



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 158/341 (46%), Gaps = 47/341 (13%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++LI  + + G+   AL + ++++   +   + A NAL+ GL++ GK+D  +     M+
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMI 662

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN----- 166
             GL  D +TY  +I+  C +G    AL++ +EM   GI P  V Y ILI GLC      
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVP 722

Query: 167 ------------------------ENKMVEA-------ESMFRSMRECGVVPNLYTYNAL 195
                                     K+V +       + +   M + G+  +L TYNAL
Sbjct: 723 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNAL 782

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG----ELRAAGNFFVHMA 251
           + GYC  + V +AL+ Y +M    + PN+ T+  L+ GL   G     +         M 
Sbjct: 783 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 842

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G+ PN   Y+ L+ G+ + GN  + + L  EM      P + TYN+LI      G++ 
Sbjct: 843 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 902

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCK---EGDMEKAL 349
            A  LL  +  +G + N  TY+ L  G+     E +++++L
Sbjct: 903 EARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSL 943



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKG----KFDSVWEFY 107
           ++ LI  +    H+E+AL  Y ++ V    P I   N LL GL   G      +   +  
Sbjct: 779 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 838

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GLV +  TY +L+      G+  K + L  EMI KG  PT+  Y +LI      
Sbjct: 839 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 898

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA---DVNRALEFYHEM 215
            KM+EA  +   +   G +PN +TY+ L  G+  ++   +++R+L+  +E+
Sbjct: 899 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEI 949


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 299/648 (46%), Gaps = 123/648 (18%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII----------AFSEMGHIEEALWV 74
           LLKS K  H   S+F+++         P VF  ++           A+++    ++AL +
Sbjct: 16  LLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDI 75

Query: 75  YRKIEVL----PAIQACNALLNGLIKKGKFD---SVWEFYEEMVLC-------------- 113
           ++++  +    P I++ N+LLN LI+  K+D   S + ++E M L               
Sbjct: 76  FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 135

Query: 114 ------------------GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
                             G   DV +YG LI+     G +  AL LFDEM ++G+ P V 
Sbjct: 136 RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195

Query: 156 IYTILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            Y ILI G   +  ++ A  ++ R ++   V PN+ +YN +++G CK    + + E +H 
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 255

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  +    ++ T+  L+ GLC  G L  A   +  MA+ GV P++ VYN +++G+ +AG 
Sbjct: 256 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315

Query: 275 LFEAMSLCSEMEK----------------------------FEISP------DVFTYNIL 300
           + E + L   MEK                            +E+ P      D  TY +L
Sbjct: 316 IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 375

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           + GLC  G L  A  +L++        +   Y+S+I+G C+EG +++   V  QMT+ G 
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 435

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +PN    +++I+G  +A  ++ A+  +  MV K   P VV +  LI+GLSK     E   
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 495

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L KEML+    P++ T S L++GL +  ++  ALN + +  +K   G+  P+  ++  II
Sbjct: 496 LVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK---GF-KPDVKMHNIII 551

Query: 481 QALCYDGQILKASKLFSDMRSDN-----------------------------------LR 505
             LC  G++  A +L+S+M+  N                                   L+
Sbjct: 552 HGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQ 611

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           PD  +Y   L+GL    R+ D +  L D +  G++P A+   ++V+GY
Sbjct: 612 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 217/429 (50%), Gaps = 7/429 (1%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +AL++F  M +  G +P +  Y  L++ L   NK  EAES F      G+ PNL TYN L
Sbjct: 71  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNIL 130

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C+    ++A E  + M      P+V ++G L++ L K G +  A   F  M + GV
Sbjct: 131 IKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGV 190

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNILIKGLCGVGQLEGAE 314
            P++  YN LIDG  K G++  A  +   + K   + P++ +YN++I GLC  G+ + + 
Sbjct: 191 TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESF 250

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +  +M K     ++ TY++LI G C  G+++ A  V  +M E GV P+VV ++++++G 
Sbjct: 251 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 310

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            +AG I+  + L+  M  K     VV +  LI GL ++  + E + +++ + E       
Sbjct: 311 LRAGRIEECLELWKVME-KEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 369

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T   L+HGL KNG ++ AL+      ++ + G    +   Y+++I  LC +G++ + + 
Sbjct: 370 MTYGVLVHGLCKNGYLNKALSIL----EEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 425

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +   M     +P+      ++ G +RA ++ D +    +M+  G  P  V    ++ G  
Sbjct: 426 VLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 485

Query: 555 ENGDLKSAF 563
           +      A+
Sbjct: 486 KAERFSEAY 494



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A ++++NGL ++G+ D V    ++M   G   +      +I+       +  AL  F  M
Sbjct: 406 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           + KG  PTVV Y  LI+GL    +  EA ++ + M + G  PN+ TY+ LM+G C+   +
Sbjct: 466 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKL 525

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + AL  + + L    +P+V    +++ GLC  G++  A   +  M +    PN+  +N L
Sbjct: 526 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL 585

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++G  K  +   A  +   + ++ + PD+ +YNI +KGLC   ++  A G L      G+
Sbjct: 586 MEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGV 645

Query: 326 LANVVTYNSLIDGYCK-EGDMEKALSVCSQMTEKGVE 361
           L   +T+N L+ GY   +G ME      S     G++
Sbjct: 646 LPTAITWNILVQGYLALKGYMEPVFVPASMKGNPGMQ 682


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 250/462 (54%), Gaps = 7/462 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I     LLN + K  KFD V    + + + G+  D+ T  +L++C C       A +
Sbjct: 69  LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +M+  G EP +V +T LI+G C  N+M EA SM   M E G+ P++  Y  ++D  C
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   VN AL  + +M ++ ++P+VV +  L++GLC  G  R A +    M K  + P++ 
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LID   K G   +A  L +EM +  I+P++FTY  LI G C  G ++ A  +   M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VV Y SLI+G+CK   ++ A+ +  +M++KG+  N +T+++LI G  + G  
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTV 437
           + A  +++ MV + + P++  +  L+  L  +G +K+ L ++++M + +   + P+++T 
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + L+HGL  NG++  AL  F +   +          + Y  IIQ +C  G++  A  LF 
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKRE----MDIGIITYTIIIQGMCKAGKVKNAVNLFC 484

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
            + S  ++P+  TYTTM+ GL R     +  +L   M + G+
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 253/496 (51%), Gaps = 6/496 (1%)

Query: 66  GHIEEALWVYRKIEVLPAIQA-CN---ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G+  +AL   R +++   ++A CN    L NGL    +F+   + +  MV    +  ++ 
Sbjct: 16  GNSGKALSFSRLLDLSFWVRAFCNYREILRNGL-HSLQFNEALDLFTHMVESRPLPSIID 74

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +  L++           +NL D +   G+   +    +L++  C  ++   A S    M 
Sbjct: 75  FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G  P++ T+ +L++G+C    +  A+   ++M+   ++P+VV +  ++D LCK G + 
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A + F  M  +G+ P++ +Y  L++G C +G   +A SL   M K +I PDV T+N LI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
                 G+   AE L  +M +  I  N+ TY SLI+G+C EG +++A  +   M  KG  
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VV ++SLI+G CK   +D AM ++ EM  K L  + + +T LI G  + G       +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  M+   + P++ T + L+H L  NG++  AL  F E   K +    +PN   Y  ++ 
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF-EDMQKREMDGVAPNIWTYNVLLH 433

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LCY+G++ KA  +F DMR   +     TYT +++G+ +A ++ + + L   +   G+ P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493

Query: 542 DAVINQVMVRGYQENG 557
           + V    M+ G    G
Sbjct: 494 NVVTYTTMISGLFREG 509



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 190/343 (55%), Gaps = 6/343 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++T+I +  + GH+  AL ++ ++E   + P +    +L+NGL   G++         M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  DV+T+  LID    +G  + A  L++EMI   I P +  YT LI+G C E  +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  MF  M   G  P++  Y +L++G+CK   V+ A++ ++EM    L  N +T+  L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE- 289
           + G  +VG+   A   F HM   GV PNI  YN L+   C  G + +A+ +  +M+K E 
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418

Query: 290 --ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++P+++TYN+L+ GLC  G+LE A  + + M K  +   ++TY  +I G CK G ++ 
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           A+++   +  KGV+PNVVT++++I G  + G    A  L+ +M
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 4/369 (1%)

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N AL+ +  M+     P+++ F  L++ + K+ +     N   H+   GV  +++  N L
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++  C++   + A S   +M K    PD+ T+  LI G C   ++E A  ++ +M + GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             +VV Y ++ID  CK G +  ALS+  QM   G+ P+VV ++SL++G C +G    A  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L   M  + + PDV+ F ALID   K+G   +   LY EM+   I P++FT +SLI+G  
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G +  A   F     K     C P+ V Y ++I   C   ++  A K+F +M    L 
Sbjct: 294 MEGCVDEARQMFYLMETKG----CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
            +  TYTT+++G  +  +      + + M+  G+ P+     V++     NG +K A   
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409

Query: 566 SEFLKESRI 574
            E +++  +
Sbjct: 410 FEDMQKREM 418



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 37/315 (11%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-----------------NSLEI 47
           L N+  +++A  L++ +T+   +  KP  +    FNAL                 N +  
Sbjct: 222 LCNSGRWRDADSLLRGMTK---RKIKPDVI---TFNALIDAFVKEGKFLDAEELYNEMIR 275

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDS 102
               P++F+  +LI  F   G ++EA  ++  +E     P + A  +L+NG  K  K D 
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTI 159
             + + EM   GL  + +TY  LI    G G V K   A  +F  M+ +G+ P +  Y +
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQ---GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392

Query: 160 LIHGLCNENKMVEAESMFRSMREC---GVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           L+H LC   K+ +A  +F  M++    GV PN++TYN L+ G C    + +AL  + +M 
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +   ++T+ +++ G+CK G+++ A N F  +   GV PN+  Y  +I G  + G   
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512

Query: 277 EAMSLCSEMEKFEIS 291
           EA  L  +M++  +S
Sbjct: 513 EAHVLFRKMKEDGVS 527



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           IL  GL  + Q   A  L   M +   L +++ +  L++   K    +  +++C  +   
Sbjct: 43  ILRNGLHSL-QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           GV  ++ T + L++  C++     A     +M+     PD+V FT+LI+G      M+E 
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + +  +M+E  I P V   +++I  L KNG ++ AL+ F    D+ +     P+ V+Y +
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF----DQMENYGIRPDVVMYTS 217

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC  G+   A  L   M    ++PD  T+  ++   ++  + LD   L  +MI+M 
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           I P+      ++ G+   G +  A R   +L E++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEA-RQMFYLMETK 311


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 239/470 (50%), Gaps = 7/470 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P       L+ G+  +       + ++EM   GL  D  TYG+LI+  C       A+ L
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 142 FDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            ++M  KG  +  V  Y ++I  LC +    EA  MF  M   G++P++  Y++LMDG C
Sbjct: 135 HEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   +  ALEF+ EM    +  +V T+  L+ GL + G  +    F   M   G  P+ F
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  LIDG CK G + EA  +   M      PD+ TYN L+ GLC VGQLE A  L + +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              GI  NV +YN LI+GYCK+  +++A  +  +M  KG++P+ VT+++LI   C++G +
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRV 372

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L+ EM        +  +  L+DGL K+G+++E + L++ + + +  P++   S L
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSIL 432

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G+ + G++  A   F    D+       P+ + Y  +I  LC  G + +A KL   M 
Sbjct: 433 LDGMCRAGKLEEAWKQF----DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                PD+ T+  +++ LL+   + + + LL +M      PD  +  +++
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 238/466 (51%), Gaps = 5/466 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   D VT   L+     +  +  A+ LFDEM +KG+      Y ILI+GLC   K   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +   M+      +++TY  ++D  CK      AL+ + EM+   + P+VV +  LMDG
Sbjct: 132 IKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L+ A  FF  M   G+  +++ YN LI G  +AG   E     + M     SPD
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
            FT+ ILI GLC  G++  A+ +L+ M+ +G   +++TYN+L++G C  G +E A  +  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            + ++G++ NV +++ LI+G CK   ID A  L+ EM  K L P  V +  LI  L + G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++   +L+ EM        + T   L+ GL KNG +  A++ F +   KT+     PN 
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF-QSIKKTEH---KPNI 426

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
            +++ ++  +C  G++ +A K F ++  + L PD   Y  ++ GL     + + + LL  
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           M + G +PD++   V+++   +  ++  A +  E ++       E 
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 220/419 (52%), Gaps = 5/419 (1%)

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           + +G EP  V  T L+ G+  EN + +A  +F  M E G+  +  TY  L++G CK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             A++  HE +  N + +V T+G+++D LCK G    A + F  M   G+ P++ VY+ L
Sbjct: 129 GLAIKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           +DG C+ G L EA+    EME   IS DV+TYN LI GL   G  +     L  M   G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             +  T+  LIDG CKEG + +A  +   M  KG EP+++T+++L++G C  G ++ A  
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+  +  + +  +V  +  LI+G  KD  + E  RL++EM    + PS  T ++LI  L 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           ++GR+  A   F+E   +T G +   +   Y  ++  LC +G + +A  LF  ++    +
Sbjct: 368 QSGRVRTAQKLFVEM--QTCGQFLKLS--TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           P+   ++ +L G+ RA ++ +      ++ K G+ PD +   +++ G    G L  A +
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +++ L K G      + + EM+  G++ DVV Y  L+D  C  G + +AL  F EM  +G
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   V  Y  LIHGL       E       M + G  P+ +T+  L+DG CK   V  A 
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +    M H   +P+++T+  LM+GLC VG+L  A   F  +A  G+  N+F YN LI+G+
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK   + EA  L  EM    + P   TYN LI  LC  G++  A+ L  +M   G    +
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TY  L+DG CK G +E+A+ +   + +   +PN+  FS L+DG C+AG ++ A   + E
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 451

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +    L PD + +  LI+GL   G + E ++L  +M E    P   T + +I  L K   
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           I  A+    E  ++      SP+  + + ++    +D Q
Sbjct: 512 IHEAIQLLEEMRNRN----FSPDEAVTSMLLCLASFDPQ 546



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 198/356 (55%), Gaps = 3/356 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+S+L+      G ++EAL  ++++E   +   +   N+L++GL + G +  V  F   M
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 242

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D  T+ +LID  C +G V +A  + + M  KG EP ++ Y  L++GLC   ++
Sbjct: 243 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQL 302

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F S+ + G+  N+++YN L++GYCK   ++ A   + EM    L+P+ VT+  L
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC+ G +R A   FV M   G F  +  Y  L+DG CK G+L EA+ L   ++K E 
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++  ++IL+ G+C  G+LE A     ++ K G+  + + YN LI+G C +G + +A+ 
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +  QM EKG  P+ +TF+ +I    K   I  A+ L  EM  ++  PD  V + L+
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 201/391 (51%), Gaps = 3/391 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  +I +  + G   EAL ++ ++    +LP +   ++L++GL + G+     EF++EM
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 207

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+ ADV TY  LI      G   +     + M+D+G  P    +TILI GLC E K+
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 267

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ +   M   G  P++ TYN LM+G C V  +  A + +  +    ++ NV ++ +L
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK  ++  A   F  M   G+ P+   YN LI   C++G +  A  L  EM+    
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              + TY +L+ GLC  G LE A  L Q + K     N+  ++ L+DG C+ G +E+A  
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              ++++ G+EP+ + ++ LI+G C  G +  A+ L  +M  K  +PD + F  +I  L 
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           K+  + E ++L +EM     +P     S L+
Sbjct: 508 KENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S +  L+    + GH+EEA+ ++   +K E  P I+  + LL+G+ + GK +  W+ ++E
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 451

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           +   GL  D + Y +LI+  C +G + +A+ L  +M +KG  P  + + ++I  L  EN+
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511

Query: 170 MVEAESMFRSMRECGVVPN 188
           + EA  +   MR     P+
Sbjct: 512 IHEAIQLLEEMRNRNFSPD 530


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 290/556 (52%), Gaps = 16/556 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + +VL N+K Y +A  ++ ++    +    P  V  ++   ++S +I K +P+VF  L+ 
Sbjct: 47  VIHVLVNSKRYDDALFIMGNLMN--VNGISPLEVLDAL---ISSYDICKSSPAVFDALVR 101

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
             +++G  E A  V  K+++      + A N  L+ L+K    +  W+ Y+EMV  G + 
Sbjct: 102 TCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIE 161

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +V T+ ++I     +G +++A+++    +  GI P VV + ++I G      M  A  + 
Sbjct: 162 NVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLV 221

Query: 178 RSMR---ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           R M     C V P+  TYN+ ++G+CK+ ++  A EF  EML   ++PNV T+  L+DG 
Sbjct: 222 RKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGY 281

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            +VG L  A      + + G+ PN  +YN +I      G++  A  L S+M    I PD 
Sbjct: 282 TRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQ 341

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           FTY+I+I+GLC  G L  A   LQ + +  ++ +  ++N +I+  C+  ++  A  + + 
Sbjct: 342 FTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLAN 401

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  +G+ P+VVTF +LID  CK G ++ A+ +Y +M+     P+++++ ++I+G +K+G+
Sbjct: 402 MYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGS 461

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
               + L   +    +   V T ++LIHG    G+I  A   F E   +  G   S  HV
Sbjct: 462 FDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEM--RNSGILAS--HV 516

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I +LC  G +L+A +L   M    L PD  TYT ++    +     +V+ L   M
Sbjct: 517 TYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYM 576

Query: 535 IKMGIVPDAVINQVMV 550
           +  G+VPD    Q MV
Sbjct: 577 VLKGVVPDRQTYQTMV 592



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 210/459 (45%), Gaps = 34/459 (7%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMV 171
           C LV  V+        C  Q     AL   D +++K  +  ++    ++IH L N  +  
Sbjct: 7   CSLVGRVI--------CKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYD 58

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +  ++     +  L   +AL+  Y    D+ ++             P V  F  L+
Sbjct: 59  DALFIMGNLMNVNGISPLEVLDALISSY----DICKS------------SPAV--FDALV 100

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
               ++G    A      +   G +  +  +N  +    K  ++     +  EM  +   
Sbjct: 101 RTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYI 160

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            +V T+N++I  L   G+L  A  ++ +  K GI  NVVT+N +IDG  K G M+ AL +
Sbjct: 161 ENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKL 220

Query: 352 CSQM---TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +M   +   V+P+ VT++S ++G CK GN+  A     EM+ K + P+V  +  L+DG
Sbjct: 221 VRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDG 280

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            ++ G+++   RL  E++E  + P+    +S+IH L   G +  A     +  DK     
Sbjct: 281 YTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKR---- 336

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+   Y+ +I+ LC +G + +A K    +   +L  D  ++  ++  L R+  +    
Sbjct: 337 IYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAK 396

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            LLA+M   G+VPD V    ++  + ++G +++A +  E
Sbjct: 397 QLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYE 435



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 46/260 (17%)

Query: 319 KMYKE----GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           KMYKE    G + NV T+N +I    KEG + +A+SV  +  + G+ PNVVTF+ +IDG 
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208

Query: 375 CKAGNIDAAMGLYTEMVIKS---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            K G +D A+ L  +M + S   + PD V + + ++G  K GN+       KEML  +I 
Sbjct: 209 IKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIE 268

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V T ++L+ G  + G + NA     E  +K       PN V+Y +II  L  +G +  
Sbjct: 269 PNVRTYATLVDGYTRVGSLENAFRLCDELVEKG----LLPNSVIYNSIIHWLSMEGDMEG 324

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           AS                                   +LL+DMI   I PD     +++ 
Sbjct: 325 AS-----------------------------------LLLSDMIDKRIYPDQFTYSIVIE 349

Query: 552 GYQENGDLKSAFRCSEFLKE 571
           G   NG L  AF+  + + E
Sbjct: 350 GLCRNGYLNEAFKFLQMILE 369


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 269/555 (48%), Gaps = 45/555 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL--WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVW 104
           + +  + S L+  F E    +EAL   ++R  E+  +P + + N LL  L  +GK     
Sbjct: 145 RVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQAD 204

Query: 105 EFYEEMVLCGLV--ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    M   G V   DVV Y  +ID    +GDV KA +LF EM+ +GI P +V Y+ ++H
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC    M +AE+  R M   GV+P+ +TYN L+ GY        A+  + EM   ++ P
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 324

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLF 276
           +VV    LM  LCK G+++ A + F  MA  G  P++F Y  +++G+   G      +LF
Sbjct: 325 DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF 384

Query: 277 E-----------------------------AMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           +                             AM + +EM    + P V TY  +I  LC +
Sbjct: 385 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI 444

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A     +M  +G++ +   Y+ LI G+C  G + KA  + S++   G+  ++V F
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            S+I+  CK G +  A  ++   V   L PD VV+  L+DG    G M++ LR++  M+ 
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A I P+V    +L++G  K GRI   L+ F E   K       P+ +LY  II  L   G
Sbjct: 565 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG----IKPSTILYNIIIDGLFEAG 620

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + + A   F +M    +  + CTY+ +LRGL + +   + + L  ++  M +  D +   
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680

Query: 548 VMVRGYQENGDLKSA 562
            M+ G  +   ++ A
Sbjct: 681 TMIAGMFQTRRVEEA 695



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 255/512 (49%), Gaps = 42/512 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+++ A  +   +++A    R++    VLP     N L+ G    G++      ++EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DVV    L+   C  G + +A ++FD M  KG  P V  YTI+++G   +  +
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+   +F  M   G+ P + T+N L+  Y     +++A+  ++EM  H ++P+VVT+  +
Sbjct: 378 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC++G++  A   F  M   GV P+ + Y+CLI G C  G+L +A  L SE+    +
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  +  +I  LC +G++  A+ +       G+  + V YN L+DGYC  G MEKAL 
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G+EPNVV + +L++G CK G ID  + L+ EM+ K + P  +++  +IDGL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G        + EM E+ I  +  T S ++ GLFKN                       
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN----------------------- 654

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                        C+D  I     LF ++R+ N++ D  T  TM+ G+ + +R+ +   L
Sbjct: 655 ------------RCFDEAIF----LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A + + G+VP AV   +M+    + G ++ A
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLIKEGLVEEA 730



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 257/514 (50%), Gaps = 7/514 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI  +S  G  +EA+ V+   R+  +LP + A N L+  L K GK     + ++ M
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM 352

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + G   DV +Y ++++    +G ++   +LFD M+  GI P +  + +LI    N   +
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 412

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F  MR+ GV P++ TY  ++   C++  ++ A+E +++M+   + P+   +  L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C  G L  A      +   G+  +I  +  +I+  CK G + +A ++        +
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD   YN+L+ G C VG++E A  +   M   GI  NVV Y +L++GYCK G +++ LS
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +KG++P+ + ++ +IDG  +AG    A   + EM    +  +   ++ ++ GL 
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 652

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+    E + L+KE+    +   + T++++I G+F+  R+  A + F   +         
Sbjct: 653 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG----LV 708

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P  V Y+ +I  L  +G + +A  +FS M++    PD+     ++R LL+   ++     
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L+ + +     + +   ++V  +   G  +   R
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIR 802



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 233/510 (45%), Gaps = 77/510 (15%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIE----------------------------- 151
           TY +L+DCC        AL  F +++  G+                              
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDGYCKV 202
                  P V  Y IL+  LCN+ K  +A+ + R M E G V  P++  YN ++DG+ K 
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKE 234

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            DVN+A + + EM+   + P++VT+  ++  LCK   +  A  F   M   GV P+ + Y
Sbjct: 235 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTY 294

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE-------- 314
           N LI G+   G   EA+ +  EM +  I PDV   N L+  LC  G+++ A         
Sbjct: 295 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM 354

Query: 315 ---------------------------GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                                       L   M  +GI   + T+N LI  Y   G ++K
Sbjct: 355 KGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDK 414

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ + ++M + GV+P+VVT+ ++I   C+ G +D AM  + +M+ + +VPD   +  LI 
Sbjct: 415 AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQ 474

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G    G++ +   L  E++   +   +    S+I+ L K GR+ +A N F    D T   
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF----DLTVNV 530

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V+Y  ++   C  G++ KA ++F  M S  + P+   Y T++ G  +  R+ + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + L  +M++ GI P  ++  +++ G  E G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 187/377 (49%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P   T+ +LMD   +      A  FF  + + G+  +  + + L+ G C+A    EA+
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--ANVVTYNSLI 336
             L     +    PDVF+YNIL+K LC  G+   A+ LL+ M + G +   +VV YN++I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  +  +M ++G+ P++VT+SS++   CKA  +D A     +MV K ++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   +  LI G S  G  KE +R++KEM    I P V  +++L+  L K G+I  A + 
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 457 F----------------------------LEKTDKTD---GGYCSPNHVLYAAIIQALCY 485
           F                            ++ TD  D   G   +P    +  +I+A   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + KA  +F++MR   ++P   TY T++  L R  +M D M     MI  G+VPD   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +G L  A
Sbjct: 469 YHCLIQGFCTHGSLLKA 485



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P   T++ L+D   +A   + A+  + +++   L  D ++ + L+ G  +     E L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L     E    P VF+ + L+  L   G+   A +    +     G  CSP+ V Y  
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLL--RMMAEGGTVCSPDVVAYNT 226

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I     +G + KA  LF +M    + PD  TY++++  L +A+ M      L  M+  G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++PD      ++ GY   G  K A R  + ++   I
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFY 107
           N   +S ++    +    +EA+++++++  +     I   N ++ G+ +  + +   + +
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +   GLV   VTY ++I     +G V +A ++F  M + G EP   +   ++  L  +
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759

Query: 168 NKMVEAESMFRSMRE 182
           N++V A +    + E
Sbjct: 760 NEIVRAGAYLSKIDE 774


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/547 (30%), Positives = 272/547 (49%), Gaps = 10/547 (1%)

Query: 21   VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE- 79
            +  +++K ++   V +S+F  ++   I   N   F+ LI      G++++A  + +++E 
Sbjct: 955  ILASMVKDKRTELV-WSLFREMSDKGICP-NVGTFNILINGLCVEGNLKKAGNLLKQMEE 1012

Query: 80   --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
               +P I   N LLN   KKG++ +  E  + M+  G+ ADV TY V ID  C      K
Sbjct: 1013 NGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAK 1072

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A  L  +M  + I P  V Y  LI+G   E K+  A  +F  M +  + PN  TYNAL+ 
Sbjct: 1073 AYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 1132

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            G+C V D   AL     M    L+ N VT+G L++GLCK  +   A      M    +  
Sbjct: 1133 GHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVV 1192

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
                Y  LIDG CK G L EA+ L   M K  ++PDV TY+ LI G C VG ++ A+ ++
Sbjct: 1193 GHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             +MY+ G++ N + Y++LI  +C+ G++ +A+ V + M   G   +  T + L+   C+ 
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312

Query: 378  GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            G +  A      M    LVP+ + +  +I+G    G+       + +M++    PS FT 
Sbjct: 1313 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 1372

Query: 438  SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
             SL+ GL K G +  A   FL +     G     + V+Y  ++   C  G + +A  LF 
Sbjct: 1373 GSLLKGLCKGGNLVEAKK-FLNRLHYIPGAV---DSVMYNTLLAETCKSGNLHEAVALFD 1428

Query: 498  DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQEN 556
             M  +N+ PD+ TY+++L GL R  + +  + L    +  G + P+ V+   +V G  + 
Sbjct: 1429 KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKA 1488

Query: 557  GDLKSAF 563
            G  K+AF
Sbjct: 1489 GHPKAAF 1495



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 282/564 (50%), Gaps = 15/564 (2%)

Query: 3    YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
            ++L  A++Y +A+ +++ + +  + S+       S+F AL ++  +    PSVF  LI  
Sbjct: 871  HILVKARMYDSAKSILRHLCQMGIGSK-------SIFGALMDTYPLCNSIPSVFDLLIRV 923

Query: 62   FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
            + + G I+ A+  +  + ++   P++  CN +L  ++K  + + VW  + EM   G+  +
Sbjct: 924  YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 983

Query: 119  VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
            V T+ +LI+  C +G++ KA NL  +M + G  PT+V Y  L++  C + +   A  +  
Sbjct: 984  VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 1043

Query: 179  SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
             M   G+  ++ TYN  +D  C      +A     +M    + PN VT+  L++G  K G
Sbjct: 1044 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 1103

Query: 239  ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            ++  A   F  M+KF + PN   YN LI GHC  G+  EA+ L   ME   +  +  TY 
Sbjct: 1104 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 1163

Query: 299  ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
             L+ GLC   + E A+ LL++M    ++   + Y  LIDG CK G +++A+ +   M + 
Sbjct: 1164 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 1223

Query: 359  GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            GV P+V+T+SSLI+G C+ GNI +A  +   M    LV + ++++ LI    + GN+ E 
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283

Query: 419  LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            +++Y  M         FT + L+  L ++G++  A  F    +         PN + Y  
Sbjct: 1284 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG----LVPNSITYDC 1339

Query: 479  IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            II      G  L A   F DM      P   TY ++L+GL +   +++    L  +  + 
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 1399

Query: 539  IVPDAVINQVMVRGYQENGDLKSA 562
               D+V+   ++    ++G+L  A
Sbjct: 1400 GAVDSVMYNTLLAETCKSGNLHEA 1423



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 244/517 (47%), Gaps = 38/517 (7%)

Query: 76   RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
            RK  + P     N L+NG +K+GK     + + EM    L  + VTY  LI   C  GD 
Sbjct: 1081 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 1140

Query: 136  MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             +AL L D M   G+    V Y  L++GLC   K   A+ +   MR   +V     Y  L
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 1200

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            +DG CK   ++ A++    M    + P+V+T+  L++G C+VG +++A      M + G+
Sbjct: 1201 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260

Query: 256  FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
              N  +Y+ LI   C+ GN+ EAM + + M       D FT N+L+  LC  G+L  AE 
Sbjct: 1261 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320

Query: 316  LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             L  M + G++ N +TY+ +I+GY   GD   A S    M + G  P+  T+ SL+ G C
Sbjct: 1321 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380

Query: 376  KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            K GN+  A      +       D V++  L+    K GN+ E + L+ +M++  + P  +
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440

Query: 436  TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL------------ 483
            T SSL+ GL + G+   A+  F     +   G   PNHV+Y  ++  L            
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGR---GTLFPNHVMYTCLVDGLSKAGHPKAAFYF 1497

Query: 484  ---------CYD--------------GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                     C D              GQ++KA+  FS MR   + P+  TY  +L G  +
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 521  AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             + +L  + L + M++ GI PD +    ++ G  ++G
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 1594



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 241/519 (46%), Gaps = 8/519 (1%)

Query: 50   FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEF 106
             N  ++STLI  F + G++ EA+ VY  +           CN L++ L + GK     +F
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
               M   GLV + +TY  +I+     GD + A + FD+MI  G  P+   Y  L+ GLC 
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
               +VEA+     +       +   YN L+   CK  +++ A+  + +M+ +N+ P+  T
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 227  FGVLMDGLCKVGELRAAGNFF-VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+ GLC+ G+   A   F   M +  +FPN  +Y CL+DG  KAG+   A     EM
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 286  EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             K    PD   +N +I      GQ+  A      M   G+  N+ TYN L+ G+ K+  +
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 1561

Query: 346  EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             + LS+ S M  +G+ P+ +TF SLI G  K+G  D  + L  +M+++  + D   F  L
Sbjct: 1562 LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNIL 1621

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            I+  S+ G M++   L   M    + P   T + + +GL K      +     E  +   
Sbjct: 1622 INKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG- 1680

Query: 466  GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                 P H  Y  +I  +C  G I  A KL  +M +          + M+RGLL   +  
Sbjct: 1681 ---VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 526  DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            D M++L  M++M ++P       ++  +  +  +  A +
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 273/627 (43%), Gaps = 74/627 (11%)

Query: 34   VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNA 89
            V   VFN ++  ++   N   ++ LI     +G  EEAL +   +E     L  +     
Sbjct: 1107 VAAQVFNEMSKFDLSP-NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY-GT 1164

Query: 90   LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
            LLNGL K  KF+      E M +  +V   + Y VLID  C  G + +A+ L   M   G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 150  IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            + P V+ Y+ LI+G C    +  A+ +   M   G+V N   Y+ L+  +C+  +V  A+
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 210  EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            + Y  M  +    +  T  VL+  LC+ G+L  A  F  HM++ G+ PN   Y+C+I+G+
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344

Query: 270  CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
               G+   A S   +M K    P  FTY  L+KGLC  G L  A+  L +++      + 
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404

Query: 330  VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC-------------- 375
            V YN+L+   CK G++ +A+++  +M +  V P+  T+SSL+ G C              
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 376  ----------------------KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
                                  KAG+  AA   + EM+ K   PD V F A+ID  S+ G
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 414  NMKETLRLYKEMLEAKITPSVFTVSSLIHG----------------LFKNGRISNALNFF 457
             M +    +  M    + P++ T + L+HG                + + G   + L F 
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 458  -----LEKTDKTDGGY----------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
                 L K+   D G              +   +  +I      G++ KA  L + M + 
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 503  NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             + PD  TY  +  GL +     +  ++L +M++ G++P       ++ G    GD++ A
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 1704

Query: 563  FRCSEFLKESRIGSSE-TEGHTTRSFL 588
            F+  + ++    GS E  E    R  L
Sbjct: 1705 FKLKDEMEALGFGSHEVAESAMVRGLL 1731



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 224/495 (45%), Gaps = 40/495 (8%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P+     +LL GL K G      +F   +       D V Y  L+   C  G++ +A+ L
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 1426

Query: 142  FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYC 200
            FD+M+   + P    Y+ L+ GLC + K V A  +F  +M    + PN   Y  L+DG  
Sbjct: 1427 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 1486

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            K      A  F+ EM+     P+ V F  ++D   + G++  A +FF  M  +GV PN+ 
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 1546

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             YN L+ G  K   L   +SL S M +  I PD  T++ LI GL   G  +    LL KM
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 1606

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALS------------------------------ 350
              EG LA+  T+N LI+ Y + G M KA                                
Sbjct: 1607 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 1666

Query: 351  -----VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                 V  +M E GV P    + +LI+G C+ G+I  A  L  EM         V  +A+
Sbjct: 1667 RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 1726

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            + GL   G  ++ + +   ML  ++ P++ T ++L+H   ++ +I+ AL   L+   +  
Sbjct: 1727 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK--LKGVMELC 1784

Query: 466  GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G     + V Y  +I  +C +G    A +L+ +MR  +L P+  TY  ++  +  A  ++
Sbjct: 1785 G--LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 1842

Query: 526  DVMMLLADMIKMGIV 540
                LL D+ + G++
Sbjct: 1843 QGEKLLTDLQERGLI 1857



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 202/398 (50%), Gaps = 10/398 (2%)

Query: 171  VEAESMFRSMRE----CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            + ++S+F ++ +    C  +P+++  + L+  Y K   ++ A+E +  +     +P+V T
Sbjct: 894  IGSKSIFGALMDTYPLCNSIPSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYT 951

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              +++  + K        + F  M+  G+ PN+  +N LI+G C  GNL +A +L  +ME
Sbjct: 952  CNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME 1011

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            +    P + TYN L+   C  G+ + A  L+  M  +GI A+V TYN  ID  C      
Sbjct: 1012 ENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSA 1071

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            KA  +  +M ++ + PN VT+++LI+G  K G I  A  ++ EM    L P+ V + ALI
Sbjct: 1072 KAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALI 1131

Query: 407  DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             G    G+ +E LRL   M  A +  +  T  +L++GL K+ +   A    LE+    D 
Sbjct: 1132 GGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELA-KRLLERMRVND- 1189

Query: 467  GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                  H+ Y  +I  LC +G + +A +L  +M  D + PD  TY++++ G  R   +  
Sbjct: 1190 --MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 1247

Query: 527  VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
               ++  M + G+V + +I   ++  + ++G++  A +
Sbjct: 1248 AKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 12/298 (4%)

Query: 273  GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
            G L +   LC+ +      P VF  ++LI+     G ++ A    + +   G   +V T 
Sbjct: 901  GALMDTYPLCNSI------PSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTC 952

Query: 333  NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            N ++    K+   E   S+  +M++KG+ PNV TF+ LI+G C  GN+  A  L  +M  
Sbjct: 953  NMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEE 1012

Query: 393  KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               VP +V +  L++   K G  K  + L   M+   I   V T +  I  L  N R + 
Sbjct: 1013 NGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAK 1072

Query: 453  ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            A    L+K  K      SPN V Y  +I     +G+I  A+++F++M   +L P+  TY 
Sbjct: 1073 AY-LLLKKMRKE---MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 1128

Query: 513  TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
             ++ G        + + LL  M   G+  + V    ++ G  ++   + A R  E ++
Sbjct: 1129 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 129/270 (47%), Gaps = 14/270 (5%)

Query: 300  LIKGLCGVGQLEGAEGLLQKMYKEGILANVV--TYNSLIDGYCKEGDMEKALSVCSQMTE 357
            +++ LC +G   G++ +   +     L N +   ++ LI  Y KEG ++ A+     +  
Sbjct: 885  ILRHLCQMGI--GSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 942

Query: 358  KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             G +P+V T + ++    K    +    L+ EM  K + P+V  F  LI+GL  +GN+K+
Sbjct: 943  VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 1002

Query: 418  TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHV 474
               L K+M E    P++ T ++L++   K GR   A+   ++ + K  + D   C+    
Sbjct: 1003 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEAD--VCT---- 1056

Query: 475  LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             Y   I  LC + +  KA  L   MR + + P+  TY T++ G ++  ++     +  +M
Sbjct: 1057 -YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM 1115

Query: 535  IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             K  + P+ V    ++ G+   GD + A R
Sbjct: 1116 SKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 126/315 (40%), Gaps = 38/315 (12%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N + ++ L+  FS+   +   L +Y  +    + P     ++L+ GL K G  D   +  
Sbjct: 1544 NLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLL 1603

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD------------------------ 143
             +M++ G +AD  T+ +LI+     G + KA +L +                        
Sbjct: 1604 GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 1663

Query: 144  -----------EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                       EM++ G+ P    Y  LI+G+C    +  A  +   M   G   +    
Sbjct: 1664 SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 1723

Query: 193  NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            +A++ G         A+     ML   L P + TF  LM   C+  ++  A      M  
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783

Query: 253  FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             G+  ++  YN LI G C  G+   A  L  EM   ++ P++ TY +L+  +     L  
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843

Query: 313  AEGLLQKMYKEGILA 327
             E LL  + + G+++
Sbjct: 1844 GEKLLTDLQERGLIS 1858



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 4/183 (2%)

Query: 401  VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            VF  LI    K+G +   +  ++ +      PSV+T + ++  + K+ R     + F E 
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 461  TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +DK   G C PN   +  +I  LC +G + KA  L   M  +   P   TY T+L    +
Sbjct: 976  SDK---GIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCK 1031

Query: 521  AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
              R    + L+  MI  GI  D     V +     N     A+   + +++  I  +E  
Sbjct: 1032 KGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVT 1091

Query: 581  GHT 583
             +T
Sbjct: 1092 YNT 1094


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 225/421 (53%), Gaps = 18/421 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+ LI    + G+ ++A+ ++  +E   V P I   N +++GL K G  +   E  EEM
Sbjct: 99  IFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEM 158

Query: 111 VLCG--LVADVVTYGVLIDC-CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +  G     D+VTY  LI+   C  GDV +AL + D M   G  P V+ Y  +IH LC  
Sbjct: 159 IRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVA 218

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++VEA  + ++M  C   P+L T+N L+DG+CK   + RALE   EM   N+ P+V+T+
Sbjct: 219 GRVVEAAEILKTM-SCS--PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 275

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++GLC+VG+++ A      + + G  P++  Y  L+DG CK+G + EA  L  EM  
Sbjct: 276 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSA 335

Query: 288 FEI---------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            EI          P +FTYNI++ GL   G +  A  L+  +   G + +VVTYN+LIDG
Sbjct: 336 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 395

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK   + +A  +  +M   G  PN VT  S++ G C+ G +D A  L  EM  K   P+
Sbjct: 396 LCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 455

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VVV+T+LIDGL K   M +   +   M    +    F    LI  +   GR++ A+  + 
Sbjct: 456 VVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYD 515

Query: 459 E 459
           E
Sbjct: 516 E 516



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 259/517 (50%), Gaps = 48/517 (9%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + + N LL+ L+K G      + Y++++  G   ++VT+ +LI   C  G   +AL    
Sbjct: 27  VHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLR 86

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
            + +  + P V I+  LIHGL  +    +A  +F +M    V P+++TYN ++ G CK  
Sbjct: 87  ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSG 146

Query: 204 DVNRALEFYHEMLHHNLQ--PNVVTFGVLMD-GLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++ +A E   EM+    +  P++VT+  L++ G+CK G++  A      M   G  P++ 
Sbjct: 147 NLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVI 206

Query: 261 VYNCLI--------------------------------DGHCKAGNLFEAMSLCSEMEKF 288
            YN +I                                DG CKAG L  A+ +  EM + 
Sbjct: 207 TYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PDV TY IL+ GLC VGQ++ A  LL+++ ++G + +V+ Y SL+DG CK G++E+A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326

Query: 349 LSVCSQMTEKGV---------EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
             +  +M+ + +          P + T++ ++ G  K G+I  A+ L +++V +  VPDV
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  LIDGL K   ++E   L  EM      P+  T+ S++ GL + GR+ +A +  +E
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
            + K      +PN V+Y ++I  LC   ++  A  +   MR   +  D+  Y  ++  ++
Sbjct: 447 MSRKRH----APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMI 502

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              R+ + M +  +M+  G +PD   ++ +      N
Sbjct: 503 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 239/451 (52%), Gaps = 19/451 (4%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV +Y  L+D     G   +   ++ +++  G  P +V + ILI G C   +   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
               R++ E  V P++Y +N L+ G  K  + ++A++ +  M    + P++ T+  ++ G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 234 LCKVGELRAAGNFFVHMAKFG--VFPNIFVYNCLID-GHCKAGNLFEAMSLCSEMEKFEI 290
           LCK G L  A      M + G    P+I  YN LI+ G CK G++ EA+ +   M+    
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PDV TYN +I  LC  G++  A  +L+ M       ++VT+N+L+DG+CK G + +AL 
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M  + + P+V+T++ L++G C+ G +  A  L  E+V +  +PDV+ +T+L+DGL 
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 411 KDGNMKETLRLYKEMLEAKI---------TPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           K G ++E  +L KEM   +I          P +FT + ++ GL K+G IS A++     +
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI---S 375

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D    GY  P+ V Y  +I  LC   ++ +A  L  +M S    P++ T  +++ GL R 
Sbjct: 376 DLVARGYV-PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRV 434

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            R+ D   L+ +M +    P+ V+   ++ G
Sbjct: 435 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 465



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 202/446 (45%), Gaps = 69/446 (15%)

Query: 44  SLEIPKFNPSVFS--TLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLN-GLI 95
           ++E  + NP +F+  T+I    + G++E+A       + R  +  P I   N L+N G+ 
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM------------------- 136
           K G  +   E  + M L G   DV+TY  +I   C  G V+                   
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFN 241

Query: 137 -------------KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
                        +AL + +EM  + I P V+ YTIL++GLC   ++  A  +   +   
Sbjct: 242 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ 301

Query: 184 GVVPNLYTYNALMDGYCKVADVNRA---------LEFYHEMLHHNLQPNVVTFGVLMDGL 234
           G +P++  Y +L+DG CK  ++  A          E   EM+  N+ P + T+ +++ GL
Sbjct: 302 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGL 361

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K G +  A +    +   G  P++  YN LIDG CKA  + EA  L  EM      P+ 
Sbjct: 362 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPND 421

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T   ++ GLC VG+++ A  L+ +M ++    NVV Y SLIDG CK   M+ A  V   
Sbjct: 422 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDA 481

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  +GV  +   +  LI      G +  AM +Y EMV +  +P              DG+
Sbjct: 482 MRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP--------------DGS 527

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSL 440
             +TL       EA ++ SVF  ++L
Sbjct: 528 TSKTLE------EAAMSNSVFEWTNL 547



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 165/310 (53%), Gaps = 10/310 (3%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN L+D   K+G+ F    +  ++     SP++ T+ ILI+G C  GQ   A   L
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + + +  +  +V  +N LI G  K+G+ ++A+ +   M    V P++ T++++I G CK+
Sbjct: 86  RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKS 145

Query: 378 GNIDAAMGLYTEMVIKS--LVPDVVVFTALID-GLSKDGNMKETLRLYKEMLEAKITPSV 434
           GN++ A  L  EM+ +     PD+V +  LI+ G+ KDG+++E L +   M  A   P V
Sbjct: 146 GNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDV 205

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +S+IH L   GR+  A       +       CSP+ V +  ++   C  G + +A +
Sbjct: 206 ITYNSIIHALCVAGRVVEAAEILKTMS-------CSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +  +M  +N+ PD  TYT ++ GL R  ++     LL ++++ G +PD +    +V G  
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 555 ENGDLKSAFR 564
           ++G+++ A +
Sbjct: 319 KSGEIEEAHK 328



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 6/247 (2%)

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++G   +V +YN L+D   K G   +   V   +   G  PN+VTF  LI G CKAG   
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+     +   S+ PDV +F  LI GL KDGN  + ++L++ M  +++ P +FT +++I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA-LCYDGQILKASKLFSDMR 500
            GL K+G +  A     E   +  GG  +P+ V Y  +I A +C DG + +A ++   M+
Sbjct: 140 SGLCKSGNLEKARELLEEMIRR--GGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                PD  TY +++  L  A R+++   +L     M   PD V    ++ G+ + G L 
Sbjct: 198 LAGPAPDVITYNSIIHALCVAGRVVEAAEILK---TMSCSPDLVTFNTLLDGFCKAGMLP 254

Query: 561 SAFRCSE 567
            A    E
Sbjct: 255 RALEVLE 261



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 3/129 (2%)

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           ++ R   A+ FF    ++   GY    H  Y  ++  L   G   +  K++ D+      
Sbjct: 3   RSSRPDLAIQFFDWAGEQD--GYKHDVHS-YNHLLDILVKSGHQFRTGKVYKDLLHSGCS 59

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  T+  ++RG  +A +    +  L  + +  + PD  I   ++ G  ++G+   A + 
Sbjct: 60  PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119

Query: 566 SEFLKESRI 574
            E ++ SR+
Sbjct: 120 FENMESSRV 128


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 250/483 (51%), Gaps = 9/483 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L+ L+           + EM+  G++  V T+GV++   C   +V  A +L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  V+Y  LIH L   +++ EA  +   M   G +P++ T+N ++ G C+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +  ++   +    ML     PN +T+GVLM+GLC+VG++  A      +      PN   
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVH 346

Query: 262 YNCLIDGHCKAGNLFEAMS-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +  LI+G+ K+G L EA + L  +M K    PDVFT+N LI GLC  G +  A  ++  M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   N++TY +L+DG+CK+  +E+A  V ++M+ KG E N++ ++ L+   CK G +
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ +  EM  K   PD+  F  LI GL K    ++ L LY++ML   +  +  T ++L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH   + G I  AL       D    G C  + + Y  +I+A C  G   KA  LF +M 
Sbjct: 527 IHAFLRGGAIQEALKLV---NDMLFRG-CPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             +L P N +   ++ GL R  ++ + + LL DMI  G+ PD V    ++ G  + G+++
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIR 642

Query: 561 SAF 563
            AF
Sbjct: 643 EAF 645



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 259/516 (50%), Gaps = 52/516 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+ TLI A S+   + EAL +  ++ +   LP +   N ++ GL +  +     +  
Sbjct: 242 NSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLV 301

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+  G   + +TYGVL++  C  G V +A      +++K   P  V +TILI+G    
Sbjct: 302 DRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKS 357

Query: 168 NKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ EA + ++  M + G  P+++T+N L+ G CK   +  A++  ++M  +   PN++T
Sbjct: 358 GRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLIT 417

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG CK  +L  AG     M+  G   NI  YN L+   CK G + +A+ +  EM 
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+FT+N LI GLC V + E A  L + M  +G++AN VTYN+LI  + + G ++
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL + + M  +G   + +T++ LI   CK G  + A+GL+ EMV K LVP  +    LI
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL + G +   L L ++M+   + P V T +SLI+GL K G I  A N           
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN----------- 646

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                                       LF+ ++++ ++PD  TY T++    RA    D
Sbjct: 647 ----------------------------LFNKLQAEGIQPDAITYNTLICWHCRAGMFDD 678

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGY-----QENG 557
             +LL   ++   +P+ V   ++V  +     +ENG
Sbjct: 679 AYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 201/410 (49%), Gaps = 4/410 (0%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF- 106
           F P+   +  L+     +G ++EA  +  K+   P       L+NG +K G+ D    F 
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT-PNDVHFTILINGYVKSGRLDEANAFL 367

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y++M+  G   DV T+  LI   C +G +  A+++ ++M   G  P ++ YT L+ G C 
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           +N++ EA  +   M   G   N+  YN L+   CK   V +AL+   EM     +P++ T
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+ GLCKV     A   +  M   GV  N   YN LI    + G + EA+ L ++M 
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D  TYN LIK  C +G  E A GL  +M ++ ++ + ++ N LI+G C+ G + 
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL +   M  +G+ P+VVT++SLI+G CK GNI  A  L+ ++  + + PD + +  LI
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
               + G   +   L    +E    P+  T   L+    K     N ++F
Sbjct: 668 CWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISF 717



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 204/393 (51%), Gaps = 8/393 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEA-LWVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
           ++P  N   F+ LI  + + G ++EA  ++Y K+      P +   N L++GL KKG   
Sbjct: 338 KVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMG 397

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           S  +   +M   G   +++TY  L+D  C +  + +A  + +EM  KG E  ++ Y +L+
Sbjct: 398 SAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLL 457

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC   K+ +A  M   M + G  P+++T+N L+ G CKV     AL  Y +ML   + 
Sbjct: 458 RALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVI 517

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N VT+  L+    + G ++ A      M   G   +   YN LI   CK G   +A+ L
Sbjct: 518 ANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGL 577

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM + ++ P   + N+LI GLC VG++  A  LL+ M   G+  +VVTYNSLI+G CK
Sbjct: 578 FDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCK 637

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G++ +A ++ +++  +G++P+ +T+++LI   C+AG  D A  L    V  + +P+ V 
Sbjct: 638 MGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVT 697

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           +  L+    K+   +  +        AK+ PS+
Sbjct: 698 WYILVSNFIKEIGKENGISFGT----AKVIPSI 726



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 186/379 (49%), Gaps = 9/379 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P   +YN ++D        + A   ++EML   + P V TFGV+M  LC V E+  A + 
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M K G  PN  VY  LI    K   + EA+ L  EM      PDV T+N +I GLC 
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           + ++     L+ +M   G   N +TY  L++G C+ G +++A      +  K   PN V 
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVH 346

Query: 367 FSSLIDGQCKAGNIDAAMG-LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           F+ LI+G  K+G +D A   LY +M+     PDV  F  LI GL K G M   + +  +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                TP++ T ++L+ G  K  ++  A     E + K   G+   N + Y  +++ALC 
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK---GF-ELNIMGYNVLLRALCK 462

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G++ KA  +  +M     +PD  T+ T++ GL +  R  D + L  DM+  G++ + V 
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522

Query: 546 NQVMVRGYQENGDLKSAFR 564
              ++  +   G ++ A +
Sbjct: 523 YNTLIHAFLRGGAIQEALK 541


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 254/529 (48%), Gaps = 12/529 (2%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
            NP     + +I      G +  AL VYR++     P       L++GL K  +     +
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV    V D  T  V++   C    V  A  L +EM+ +G+    + Y+ L+ GLC
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA ++  +M E G  P + TYN+++ G+C+   V+ A  F  +M+     P+++
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G CK  ++         + + G  P+I  Y+ +IDG CKAG L +A+ +  EM
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                +P   TYN LI G C  G ++ A  LL KM  +    +VVTY +L+  +CK G +
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + A  +  QM    + P+VVTF+SL+DG C  G ++ A+ L  E+  +   P +  +  +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DG  K   +++   L  +       P+  T + L+ G  + GR   AL +  +    ++
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL--NSE 415

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           GG C  +  +YA I+ ALC DG+   A + + +M      P   T+ T++  L +A +  
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
               LL +MIK G  P       +V  Y   G ++ A    E   E R+
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA---DELASELRL 521



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 40/275 (14%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  +   G ++EA+ +  K+   +  P +     L++   K G+ D  +E +++M
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V   L  DVVT+  L+D  CG+G +  AL L +E+  +G  PT+  Y  ++ G C  N++
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE-------------------- 210
            +AE +    R  G VPN  TYN L+ G C+    ++AL+                    
Sbjct: 368 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 427

Query: 211 -----------------FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
                            FY EM+     P   TF  ++  LCK  + + A      M K+
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           G  P     + ++  +C+AG + +A  L SE+  +
Sbjct: 488 GHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 254/514 (49%), Gaps = 7/514 (1%)

Query: 47  IPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           + +F P VF  +++I  + + G ++   +     +    + +   ++ GL    + D   
Sbjct: 69  LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEAC 128

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E +EE+   G   +VV Y  +ID     G +   L  F+EM      PT   YT++I GL
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + +A  +F  M + G VP+  TY  L+DG+ K + ++ A +    ML    +P  
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+G ++ G CK+  +  A      M + G  P +F++  L+  +   G   EA  + +E
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     +PDV  Y  LI  L   G++  A  +   M ++G   + +TY ++I  + K G+
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E A  +   M + GV P+   ++SL+DG  K   +D A G+Y  MV   + P+ V F  
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428

Query: 405 LIDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           L+ GL KDG       L+KEMLE  ++ P++ + + LI GL K GR+S A   FL+  + 
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA---FLQFQEM 485

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            D G     H  Y ++I +L   G+I +A KL  DM    + PD   Y+ ++ GL+ +  
Sbjct: 486 IDRGIIPECHT-YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM 544

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +     +  +M+K G  P+ V  +V+ RG++  G
Sbjct: 545 VDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 233/477 (48%), Gaps = 8/477 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I   ++   I+EA  ++ +++     P + A  A+++GL+K G+ +   + +EEM 
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
               V    TY V+ID  C    +  A  +F++M+ KG  P  + YT LI G    +KM 
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M   G  P   TY +++ G+CK+  +N A E   +M     +P +  F  L+
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
                 G    A      M   G  P++ +Y  LID     G + EA  +   M +   +
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY  +I+    +G +E A  +L+ M K G+  +   YNSL+DGY K   +++A  V
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV-FTALIDGLS 410
             +M   G++PN VTF+ L+ G  K G  D A  L+ EM+ K  VP  +V +T LIDGL 
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E    ++EM++  I P   T +SLI+ L K GRI  A        D    G  +
Sbjct: 471 KAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV---EDMVKLG-VN 526

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           P+   Y+A+I  L     +  A  +F +M      P+  TY  + RG   A R LD+
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 583



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 241/549 (43%), Gaps = 71/549 (12%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I + N +++GL    K D  ++F+  M+  G   DV+ +  LI   C  G       L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 142 FDEMIDKGIEPTVVIYTILIHGLC--------------------------------NENK 169
            ++ + K   P V +YT +IHG C                                +  +
Sbjct: 65  LNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKR 123

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  +F  ++  G  PN+  Y A++DG  K   +   L+ + EM   +  P   T+ V
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DGLCK   L  A   F  M + G  P+   Y  LIDG  KA  + EA  L   M    
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P   TY  ++ G C +  +  A+ ++ +M + G    +  + SL+  Y  +G  E+A 
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V ++MT +G  P+V+ ++SLID     G +  A  ++  M+ K   PD + +  +I   
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 410 SKDGNMK-----------------------------------ETLRLYKEMLEAKITPSV 434
           SK GN++                                   +   +Y  M+ + I P+ 
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + L+HGLFK+G+   A + F E  +K +     P  V Y  +I  L   G++ +A  
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKEE---VPPTLVSYTILIDGLGKAGRVSEAFL 480

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F +M    + P+  TYT+++  L +A R+ +   L+ DM+K+G+ PD      ++ G  
Sbjct: 481 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 540

Query: 555 ENGDLKSAF 563
           ++  + +A+
Sbjct: 541 DSSMVDTAW 549



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 202/396 (51%), Gaps = 16/396 (4%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P + +YN ++ G   +  ++ A +F++ M+ +  +P+V+ F  L+ G CK G+ +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV- 60

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL----FEAMSLCSEMEKFEISPDVFTYNI 299
           G+  ++ A     P++F+Y  +I G+CKAG+L    F A++        + S DV +Y  
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTP-------KASLDVISYTT 113

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +IKGL    +++ A  L +++   G   NVV Y ++IDG  K G +E  L    +M+   
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P   T++ +IDG CKA  +  A  ++ +MV K  VPD + +T LIDG SK   M E  
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           +L   ML     P+  T  S++HG  K   I+ A     +  ++     C P   ++ ++
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG----CEPGLFIFTSL 289

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +      G+  +A ++ ++M +    PD   YT+++  L    R+ +   +   MI+ G 
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            PDA+    +++ + + G++++A    E + +S +G
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 5/276 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++++LI      G + EA  V+  +      P       ++    K G  ++  E  E M
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D   Y  L+D       V +A  ++D M+  GI+P  V + +L+HGL  + K 
Sbjct: 380 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 439

Query: 171 VEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             A S+F+ M E   V P L +Y  L+DG  K   V+ A   + EM+   + P   T+  
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTS 499

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  L K G +  A      M K GV P++  Y+ LI G   +  +  A  +  EM K  
Sbjct: 500 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 559

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
            +P+  TY +L +G    G+    E + Q  + +G+
Sbjct: 560 CAPNEVTYKVLRRGFRAAGRALDLEAVKQH-FSQGV 594


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 267/538 (49%), Gaps = 9/538 (1%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQA 86
           K   + +S+F  ++   I   N   F+ LI      G++++A  + +++E    +P I  
Sbjct: 212 KRTELVWSLFREMSDKGICP-NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            N LLN   KKG++ +  E  + M+  G+ ADV TY V ID  C      KA  L  +M 
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            + I P  V Y  LI+G   E K+  A  +F  M +  + PN  TYNAL+ G+C V D  
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            AL     M    L+ N VT+G L++GLCK  +   A      M    +      Y  LI
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG CK G L EA+ L   M K  ++PDV TY+ LI G C VG ++ A+ ++ +MY+ G++
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N + Y++LI  +C+ G++ +A+ V + M   G   +  T + L+   C+ G +  A   
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              M    LVP+ + +  +I+G    G+       + +M++    PS FT  SL+ GL K
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G +  A   FL +     G   + + V+Y  ++   C  G + +A  LF  M  +N+ P
Sbjct: 631 GGNLVEAKK-FLNRLHYIPG---AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 686

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQENGDLKSAF 563
           D+ TY+++L GL R  + +  + L    +  G + P+ V+   +V G  + G  K+AF
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 282/564 (50%), Gaps = 15/564 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
           ++L  A++Y +A+ +++ + +  + S+       S+F AL ++  +    PSVF  LI  
Sbjct: 120 HILVKARMYDSAKSILRHLCQMGIGSK-------SIFGALMDTYPLCNSIPSVFDLLIRV 172

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           + + G I+ A+  +  + ++   P++  CN +L  ++K  + + VW  + EM   G+  +
Sbjct: 173 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 232

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +LI+  C +G++ KA NL  +M + G  PT+V Y  L++  C + +   A  +  
Sbjct: 233 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 292

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+  ++ TYN  +D  C      +A     +M    + PN VT+  L++G  K G
Sbjct: 293 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 352

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A   F  M+KF + PN   YN LI GHC  G+  EA+ L   ME   +  +  TY 
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 412

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GLC   + E A+ LL++M    ++   + Y  LIDG CK G +++A+ +   M + 
Sbjct: 413 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 472

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           GV P+V+T+SSLI+G C+ GNI +A  +   M    LV + ++++ LI    + GN+ E 
Sbjct: 473 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           +++Y  M         FT + L+  L ++G++  A  F    +         PN + Y  
Sbjct: 533 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG----LVPNSITYDC 588

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           II      G  L A   F DM      P   TY ++L+GL +   +++    L  +  + 
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 648

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
              D+V+   ++    ++G+L  A
Sbjct: 649 GAVDSVMYNTLLAETCKSGNLHEA 672



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 244/517 (47%), Gaps = 38/517 (7%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  + P     N L+NG +K+GK     + + EM    L  + VTY  LI   C  GD 
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L D M   G+    V Y  L++GLC   K   A+ +   MR   +V     Y  L
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 449

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG CK   ++ A++    M    + P+V+T+  L++G C+VG +++A      M + G+
Sbjct: 450 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N  +Y+ LI   C+ GN+ EAM + + M       D FT N+L+  LC  G+L  AE 
Sbjct: 510 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 569

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L  M + G++ N +TY+ +I+GY   GD   A S    M + G  P+  T+ SL+ G C
Sbjct: 570 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K GN+  A      +       D V++  L+    K GN+ E + L+ +M++  + P  +
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL------------ 483
           T SSL+ GL + G+   A+  F     +   G   PNHV+Y  ++  L            
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGR---GTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746

Query: 484 ---------CYD--------------GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                    C D              GQ++KA+  FS MR   + P+  TY  +L G  +
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            + +L  + L + M++ GI PD +    ++ G  ++G
Sbjct: 807 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 843



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 241/519 (46%), Gaps = 8/519 (1%)

Query: 50   FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEF 106
             N  ++STLI  F + G++ EA+ VY  +           CN L++ L + GK     +F
Sbjct: 511  LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
               M   GLV + +TY  +I+     GD + A + FD+MI  G  P+   Y  L+ GLC 
Sbjct: 571  LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
               +VEA+     +       +   YN L+   CK  +++ A+  + +M+ +N+ P+  T
Sbjct: 631  GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690

Query: 227  FGVLMDGLCKVGELRAAGNFF-VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+ GLC+ G+   A   F   M +  +FPN  +Y CL+DG  KAG+   A     EM
Sbjct: 691  YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 750

Query: 286  EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             K    PD   +N +I      GQ+  A      M   G+  N+ TYN L+ G+ K+  +
Sbjct: 751  MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 810

Query: 346  EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             + LS+ S M  +G+ P+ +TF SLI G  K+G  D  + L  +M+++  + D   F  L
Sbjct: 811  LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNIL 870

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            I+  S+ G M++   L   M    + P   T + + +GL K      +     E  +   
Sbjct: 871  INKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG- 929

Query: 466  GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                 P H  Y  +I  +C  G I  A KL  +M +          + M+RGLL   +  
Sbjct: 930  ---VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 526  DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            D M++L  M++M ++P       ++  +  +  +  A +
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 273/627 (43%), Gaps = 74/627 (11%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNA 89
           V   VFN ++  ++   N   ++ LI     +G  EEAL +   +E     L  +     
Sbjct: 356 VAAQVFNEMSKFDLSP-NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY-GT 413

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLNGL K  KF+      E M +  +V   + Y VLID  C  G + +A+ L   M   G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P V+ Y+ LI+G C    +  A+ +   M   G+V N   Y+ L+  +C+  +V  A+
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + Y  M  +    +  T  VL+  LC+ G+L  A  F  HM++ G+ PN   Y+C+I+G+
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
              G+   A S   +M K    P  FTY  L+KGLC  G L  A+  L +++      + 
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC-------------- 375
           V YN+L+   CK G++ +A+++  +M +  V P+  T+SSL+ G C              
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 376 ----------------------KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
                                 KAG+  AA   + EM+ K   PD V F A+ID  S+ G
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHG----------------LFKNGRISNALNFF 457
            M +    +  M    + P++ T + L+HG                + + G   + L F 
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 458 -----LEKTDKTDGGY----------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
                L K+   D G              +   +  +I      G++ KA  L + M + 
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + PD  TY  +  GL +     +  ++L +M++ G++P       ++ G    GD++ A
Sbjct: 894 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 953

Query: 563 FRCSEFLKESRIGSSE-TEGHTTRSFL 588
           F+  + ++    GS E  E    R  L
Sbjct: 954 FKLKDEMEALGFGSHEVAESAMVRGLL 980



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 224/495 (45%), Gaps = 40/495 (8%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P+     +LL GL K G      +F   +       D V Y  L+   C  G++ +A+ L
Sbjct: 616  PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 675

Query: 142  FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYC 200
            FD+M+   + P    Y+ L+ GLC + K V A  +F  +M    + PN   Y  L+DG  
Sbjct: 676  FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 735

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            K      A  F+ EM+     P+ V F  ++D   + G++  A +FF  M  +GV PN+ 
Sbjct: 736  KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 795

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             YN L+ G  K   L   +SL S M +  I PD  T++ LI GL   G  +    LL KM
Sbjct: 796  TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 855

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALS------------------------------ 350
              EG LA+  T+N LI+ Y + G M KA                                
Sbjct: 856  IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 915

Query: 351  -----VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                 V  +M E GV P    + +LI+G C+ G+I  A  L  EM         V  +A+
Sbjct: 916  RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 975

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            + GL   G  ++ + +   ML  ++ P++ T ++L+H   ++ +I+ AL   L+   +  
Sbjct: 976  VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK--LKGVMELC 1033

Query: 466  GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G     + V Y  +I  +C +G    A +L+ +MR  +L P+  TY  ++  +  A  ++
Sbjct: 1034 G--LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 1091

Query: 526  DVMMLLADMIKMGIV 540
                LL D+ + G++
Sbjct: 1092 QGEKLLTDLQERGLI 1106



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 202/398 (50%), Gaps = 10/398 (2%)

Query: 171 VEAESMFRSMRE----CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + ++S+F ++ +    C  +P+++  + L+  Y K   ++ A+E +  +     +P+V T
Sbjct: 143 IGSKSIFGALMDTYPLCNSIPSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYT 200

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             +++  + K        + F  M+  G+ PN+  +N LI+G C  GNL +A +L  +ME
Sbjct: 201 CNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME 260

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P + TYN L+   C  G+ + A  L+  M  +GI A+V TYN  ID  C      
Sbjct: 261 ENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSA 320

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  +  +M ++ + PN VT+++LI+G  K G I  A  ++ EM    L P+ V + ALI
Sbjct: 321 KAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALI 380

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G    G+ +E LRL   M  A +  +  T  +L++GL K+ +   A    LE+    D 
Sbjct: 381 GGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELA-KRLLERMRVND- 438

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                 H+ Y  +I  LC +G + +A +L  +M  D + PD  TY++++ G  R   +  
Sbjct: 439 --MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 496

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              ++  M + G+V + +I   ++  + ++G++  A +
Sbjct: 497 AKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 12/298 (4%)

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L +   LC+ +      P VF  ++LI+     G ++ A    + +   G   +V T 
Sbjct: 150 GALMDTYPLCNSI------PSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTC 201

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N ++    K+   E   S+  +M++KG+ PNV TF+ LI+G C  GN+  A  L  +M  
Sbjct: 202 NMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEE 261

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
              VP +V +  L++   K G  K  + L   M+   I   V T +  I  L  N R + 
Sbjct: 262 NGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAK 321

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A    L+K  K      SPN V Y  +I     +G+I  A+++F++M   +L P+  TY 
Sbjct: 322 AY-LLLKKMRKE---MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 377

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            ++ G        + + LL  M   G+  + V    ++ G  ++   + A R  E ++
Sbjct: 378 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 129/270 (47%), Gaps = 14/270 (5%)

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVV--TYNSLIDGYCKEGDMEKALSVCSQMTE 357
           +++ LC +G   G++ +   +     L N +   ++ LI  Y KEG ++ A+     +  
Sbjct: 134 ILRHLCQMGI--GSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 191

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G +P+V T + ++    K    +    L+ EM  K + P+V  F  LI+GL  +GN+K+
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHV 474
              L K+M E    P++ T ++L++   K GR   A+   ++ + K  + D   C+    
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEAD--VCT---- 305

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y   I  LC + +  KA  L   MR + + P+  TY T++ G ++  ++     +  +M
Sbjct: 306 -YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM 364

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            K  + P+ V    ++ G+   GD + A R
Sbjct: 365 SKFDLSPNCVTYNALIGGHCHVGDFEEALR 394



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 126/315 (40%), Gaps = 38/315 (12%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N + ++ L+  FS+   +   L +Y  +    + P     ++L+ GL K G  D   +  
Sbjct: 793  NLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLL 852

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD------------------------ 143
             +M++ G +AD  T+ +LI+     G + KA +L +                        
Sbjct: 853  GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 912

Query: 144  -----------EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                       EM++ G+ P    Y  LI+G+C    +  A  +   M   G   +    
Sbjct: 913  SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 972

Query: 193  NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            +A++ G         A+     ML   L P + TF  LM   C+  ++  A      M  
Sbjct: 973  SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1032

Query: 253  FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             G+  ++  YN LI G C  G+   A  L  EM   ++ P++ TY +L+  +     L  
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092

Query: 313  AEGLLQKMYKEGILA 327
             E LL  + + G+++
Sbjct: 1093 GEKLLTDLQERGLIS 1107



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 4/183 (2%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           VF  LI    K+G +   +  ++ +      PSV+T + ++  + K+ R     + F E 
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           +DK   G C PN   +  +I  LC +G + KA  L   M  +   P   TY T+L    +
Sbjct: 225 SDK---GIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCK 280

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             R    + L+  MI  GI  D     V +     N     A+   + +++  I  +E  
Sbjct: 281 KGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVT 340

Query: 581 GHT 583
            +T
Sbjct: 341 YNT 343


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 235/453 (51%), Gaps = 4/453 (0%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M L GL  +  T  +LI+C C    V    ++  + I  G++PT+V +T LI+GL    K
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             +A  +F  M   G  P+ YTY  +++G CK+ +   A   + +M     Q NVVT+  
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  LCK   +  A + F +M    + P IF Y  LI G C      EA +L +EM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I P+V T+N+L+   C  G++  AEG+L+ M + G+  +VVTYNSL+ GY    ++ +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M  KG +P+V ++S LI+G CKA  ID A  L+ EM+ +   P+ V +  LI GL
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G ++E   L+K M      P+++T + L+ G  K G +  A   F          Y 
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLF----RAMQSTYL 356

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN V+Y  ++ A+C  G +  A +LFS++    L+P+   YTT++ GL +   + + + 
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +M   G  PD     V++RG+ ++ D   A
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 232/463 (50%), Gaps = 7/463 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N    + LI  F ++  ++    V  K   + + P I     L+NGL K GKF    E +
Sbjct: 9   NTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELF 68

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  G   D  TY  +I+  C  G+   A  LF +M + G +  VV Y+ LIH LC  
Sbjct: 69  DDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKY 128

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA  +F  M+   + P ++TY +L+ G C  +    A    +EM   N+ PNVVTF
Sbjct: 129 RRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF 188

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+D  CK G++ AA      M + GV P++  YN L+ G+     + EA  L   M  
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDVF+Y+ILI G C   +++ A+ L  +M  +G   N V+YN+LI G C+ G + +
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M   G  PN+ T++ L+DG CK G +  A  L+  M    L P++V++  L++
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            + K GN+K+   L+ E+    + P+V   +++I+GL K G +  AL  F    D  DG 
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED--DG- 425

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            C P+   Y  II+         +A  L  +MR      D  T
Sbjct: 426 -CPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 4/298 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNG 93
           ++ N + SL I   N   F+ L+  F + G +   E  L    ++ V P +   N+L+ G
Sbjct: 171 ALLNEMTSLNIMP-NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
                +     + ++ M+  G   DV +Y +LI+  C    + +A  LF+EMI +G  P 
Sbjct: 230 YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  LIHGLC   ++ EA+ +F++M   G +PNLYTY  L+DG+CK   + +A   + 
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M    L+PN+V + +L++ +CK G L+ A   F  +   G+ PN+ +Y  +I+G CK G
Sbjct: 350 AMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEG 409

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            L EA+     ME     PD F+YN++I+G         A  L+ +M   G + +  T
Sbjct: 410 LLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 275/529 (51%), Gaps = 10/529 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNG 93
           ++F++L   ++   +   +STL+   ++   ++ AL +  ++    V P +   NALL G
Sbjct: 179 TLFDSLRRRQVAP-DRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGG 237

Query: 94  LIKKGKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
             K G+F+ V   ++++V   G   ++ TY V++D  C  G   +   +++ M+   ++P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V+ Y ILIHGLC    +  A  ++  + + G+V +   YN+L+ G+C+   V  A +F+
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCK 271
                  L+ N+ T+ +++ GL   G +  A   +  + K     P+   +  LI G C+
Sbjct: 358 DSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQ 416

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G   +A ++  E        DVF+Y+ +I GLC VG+L  A  + +KM K+G   N   
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHI 476

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LI G+C+      A+ + S+M + G  P V+T+++LIDG CKA     A  +  EMV
Sbjct: 477 YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                PD+  + +LI GL  D  + + L ++K++L   +   V   + LIHGL   G++ 
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL+ F +  +K +   C PN V Y  ++  L   G I KA+ L++ +  D L PD  +Y
Sbjct: 597 EALHVFSDMKEKKN---CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            T ++GL    R+ + + LL +++  GI+P  +   ++VR   + G ++
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 210/446 (47%), Gaps = 48/446 (10%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG----VVPNLYTYNALMDGYCKVAD 204
           G  P +  +  L+       +  +A++ F S+        + PNL TYN ++   C   D
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 205 VNR-----------------------------------ALEFYHEMLHHNLQPNVVTFGV 229
           ++R                                   AL+   EM    +QP+VV +  
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 230 LMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           L+ G  K GE       +  + K  G  PN+  YN ++DG CK G   E   +   M   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + PDV TY ILI GLC  G ++GA  +  ++ K G++ +   YNSL+ G+C+ G +++A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL--VPDVVVFTALI 406
                     G+  N+ T++ +I G   +G +D A+ L+ +++ K +  +PD V F  LI
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLI 411

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL ++G   +   +++E   +     VF+ SS+I+GL   GR+ +A+  + EK DK DG
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY-EKMDK-DG 469

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN  +Y A+I   C   +   A +++S M  +   P   TY T++ GL +A++  +
Sbjct: 470 --CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRG 552
              +  +M++ G  PD      ++RG
Sbjct: 528 ASSVAREMVENGFTPDITTYGSLIRG 553



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 175/353 (49%), Gaps = 30/353 (8%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK----FEISPDVFTYNILIKGLCGVG 308
            G  P I  +N L+D   +A    +A +  + +        I+P++ TYNI+++ LC  G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            L+ A  L   + +  +  + +TY++L+ G  K+  ++ AL +  +M    V+P+VV ++
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +L+ G  KAG  +  M ++ ++V      P++  +  ++DGL K G  KE   +++ M+ 
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGYCSPNHVLYAAIIQALCY 485
             + P V T   LIHGL ++G +  A   + E  KT          +  +Y ++++  C 
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV------IDAAMYNSLVKGFCQ 346

Query: 486 DGQILKASKL-----FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI- 539
            G++ +A K      F+ +R  NLR    TY  M++GL  +  M+D  + L D+++  + 
Sbjct: 347 AGRVQEAWKFWDSAGFAGLR--NLR----TYNIMIKGLFDSG-MVDEAIELWDLLEKDVA 399

Query: 540 -VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            +PD V    ++ G  +NG    AF      +E+R+   + +  +  S +  L
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAF---TIFEEARVSGKQLDVFSYSSMINGL 449


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/365 (35%), Positives = 213/365 (58%), Gaps = 5/365 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F P+V  ++T+I  +S  G+IE A  +   + V    P      +L++G+ K+G+ +   
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +++MV  GLV + VTY  LID  C +GD+ +A +  DEM+ KGI P+V  Y +L+H L
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             E +M EA+ M + MR+ G++P+  TYN L++GY +  +  RA + ++EML   ++P  
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+  L +   ++ A + F  +   GV P++ ++N +IDGHC  GN+  A  L  E
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++  + PD  T+N L++G C  G++E A  LL +M   GI  + ++YN+LI GY + GD
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  V  +M   G  P ++T+++LI   CK    D A  L  EMV K + PD   + +
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 563

Query: 405 LIDGL 409
           LI+G+
Sbjct: 564 LIEGM 568



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 204/387 (52%), Gaps = 4/387 (1%)

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +GK     EF   M   G   +VV+Y  +I     +G++  A  + D M  KGIEP    
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI G+C E ++ EA  +F  M E G+VPN  TYN L+DGYC   D+ RA  +  EM+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+V T+ +L+  L   G +  A +    M K G+ P+   YN LI+G+ + GN  
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L +EM    I P   TY  LI  L    +++ A+ L +K+  +G+  +V+ +N++I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+C  G++E+A  +  +M  K V P+ VTF++L+ G+C+ G ++ A  L  EM  + + 
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD + +  LI G  + G++K+   +  EML     P++ T ++LI  L KN     A   
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQAL 483
             E  +K      SP+   Y ++I+ +
Sbjct: 546 LKEMVNKG----ISPDDSTYLSLIEGM 568



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 4/326 (1%)

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+L+ A  F   M   G  PN+  YN +I G+   GN+  A  +   M    I PD +TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI G+C  G+LE A GL  KM + G++ N VTYN+LIDGYC +GD+E+A S   +M +
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+ P+V T++ L+      G +  A  +  EM  K ++PD + +  LI+G S+ GN K 
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L+ EML   I P+  T +SLI+ L +  R+  A + F +  D+      SP+ +++ 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG----VSPDVIMFN 422

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I   C +G + +A  L  +M   ++ PD  T+ T+++G  R  ++ +  MLL +M   
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAF 563
           GI PD +    ++ GY   GD+K AF
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAF 508



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 201/387 (51%), Gaps = 4/387 (1%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +G + KA      M   G +P VV Y  +IHG  +   +  A  +  +MR  G+ P+ YT
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y +L+ G CK   +  A   + +M+   L PN VT+  L+DG C  G+L  A ++   M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K G+ P++  YN L+      G + EA  +  EM K  I PD  TYNILI G    G  +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L  +M  +GI    VTY SLI    +   M++A  +  ++ ++GV P+V+ F+++I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG C  GN++ A  L  EM  KS+ PD V F  L+ G  ++G ++E   L  EM    I 
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P   + ++LI G  + G I +A   F  + +    G+ +P  + Y A+I+ LC + +   
Sbjct: 486 PDHISYNTLISGYGRRGDIKDA---FXVRDEMLSIGF-NPTLLTYNALIKCLCKNQEGDL 541

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           A +L  +M +  + PD+ TY +++ G+
Sbjct: 542 AEELLKEMVNKGISPDDSTYLSLIEGM 568


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 261/510 (51%), Gaps = 16/510 (3%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV-FSTLIIA 61
           ++L + KL  +A+ LI  +  N + S  P     S+ + L   + P    ++ + ++I A
Sbjct: 46  HLLDHHKL-PHAQSLILQILSNKISS--PFFTVPSLLHHLTQNQNPSMTTALLYESIINA 102

Query: 62  FSEMGHIEEALWVY-----RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             +   +++AL  +     + +   P I   N+LL  L++   F+  W F+ E+    + 
Sbjct: 103 HLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFNELKE-RVK 159

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            DV ++G++I  CC  G++ K+  L   + D G+ P VVIYT LI G C    +  A   
Sbjct: 160 FDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLF 219

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F  M E G+V N YT+  L++G  K        + + +M  + L PN+ T+  LM+  C 
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G++  A + F  M + GV  N+  YN LI G C+   ++EA  L  +M+K  +SP++ T
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI G C VG L+ A  LL ++   G+  ++VTYN LI+GY K G+ +    +  +M 
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G+ P+ VT + LID   +   ++ A  +Y+ M    LVPDV V+  LI GL   GNMK
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E+ +L++ M E  + PS    +++IHG  K      AL    E   K       PN   Y
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKG----LVPNVASY 515

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           ++II  LC DG+  +A  L   M    L+P
Sbjct: 516 SSIIGVLCKDGKWEEAEVLLDKMIELQLKP 545



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 212/408 (51%), Gaps = 9/408 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           KAL  F+EM+DKG+     I+  L+  L   N   +A   F  ++E  V  ++Y++  ++
Sbjct: 111 KALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKE-RVKFDVYSFGIMI 169

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C+  +++++ +    +    L PNVV +  L+DG CK G++  A  FF  M + G+ 
Sbjct: 170 KGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLV 229

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            N + +  LI+G  K G   +   L  +M+   + P+++TYN L+   CG G++  A  L
Sbjct: 230 ANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDL 289

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M + G+ ANVVTYN+LI G C+E  + +A  +  QM +  V PN++T+++LI G C 
Sbjct: 290 FDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCD 349

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN+D A  L  ++    L P +V +  LI+G SK GN K    L +EM    I+PS  T
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409

Query: 437 VSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            + LI    +   +  A   +  +EK          P+  +Y  +I  LC  G + ++SK
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLV------PDVYVYGVLIHGLCMKGNMKESSK 463

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LF  M   ++ P +  Y TM+ G  +       + LL +M   G+VP+
Sbjct: 464 LFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPN 511



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 219/466 (46%), Gaps = 30/466 (6%)

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT---- 191
           ++AL+LF+  I +G + T    + L+  L + +K+  A+S+   +    +    +T    
Sbjct: 19  LQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSL 78

Query: 192 -----------------YNALMDGYCKVADVNRALEFYHEMLHHNL--QPNVVTFGVLMD 232
                            Y ++++ + K   +++AL F++EM+   L  +PN+  F  L+ 
Sbjct: 79  LHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLG 136

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            L +      A  FF  + +   F +++ +  +I G C+ GNL ++  L   ++   +SP
Sbjct: 137 SLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSP 195

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V  Y  LI G C  G +E A     KM + G++AN  T+  LI+G  K+G  +    + 
Sbjct: 196 NVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLF 255

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M   G+ PN+ T++ L++  C  G I  A  L+ EM  + +  +VV +  LI G+ ++
Sbjct: 256 EKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCRE 315

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + E  +L  +M +A ++P++ T ++LI G    G +  A +      D+      SP+
Sbjct: 316 ERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLL----DQLKSNGLSPS 371

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I+     G     + L  +M    + P   T T ++   +R + M     + +
Sbjct: 372 LVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYS 431

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            M K G+VPD  +  V++ G    G++K + +    + E  +  S+
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 236/470 (50%), Gaps = 8/470 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N+L+ G  +  + D   + +++M L G   DVV+Y  LI+  C  G + +A+ L
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM     +P + +Y  L+ GLCN  +  E   M R M+E G  P+   Y A++D  C+
Sbjct: 68  FGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A E   EM    L P VVT   +++  CK G +  A      M   G  PN++ 
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G C  G + +AM+L ++M    ++PD  TYN+LI+G C  G +E A  LL+ M 
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G++A+  TYN+LI+  CK+G  ++A S+   +  +G++PN VTF+SLI+G CK+G  D
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A     +MV     PD   +++ I+ L K    +E L    EML+  + PS    + +I
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           H L K          + E         C+P+ V Y   ++A C +G++ +A  +  +M  
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSG----CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 419

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + +  D   Y T++ G     +    + +L  M  +  VP+     +++R
Sbjct: 420 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 240/527 (45%), Gaps = 24/527 (4%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           E+ + +  +++ L+         EE L + R+++ L   P+ +A  A+++   ++ K   
Sbjct: 70  EMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKE 129

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             E  +EM   GL   VVT   +I+  C +G +  AL + + M  +G +P V  Y  L+ 
Sbjct: 130 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 189

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G CNE K+ +A ++   MR CGV P+  TYN L+ G C    +  A      M    L  
Sbjct: 190 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 249

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +  T+  L++ LCK G    A + F  +   G+ PN   +N LI+G CK+G    A    
Sbjct: 250 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 309

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +M     +PD +TY+  I+ LC +   +     + +M ++ +  + V Y  +I    KE
Sbjct: 310 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 369

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
            +         +M   G  P+VVT+++ +   C  G ++ A  +  EM    +  D + +
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 429

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH-----------------GLF 445
             L+DG +  G     + + K+M      P+ FT   L+                  G++
Sbjct: 430 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 489

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   +++    F    D        PN   Y++I++    DG+  +A+ L S M+ D++ 
Sbjct: 490 KAIELTDVFGLF----DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 545

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +   YT ++    ++KR LD  +L+  MI+ G +P  +  Q ++ G
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSG 592



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 219/491 (44%), Gaps = 56/491 (11%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C A++N   K+G+        E M L G   +V TY  L+   C +G V KA+ L
Sbjct: 144 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 203

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++M   G+ P  V Y +LI G C +  +  A  + R M   G++ + YTYNAL++  CK
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 263

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               ++A   +  +    ++PN VTF  L++GLCK G+   A  F   M   G  P+ + 
Sbjct: 264 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 323

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEI------------------------------- 290
           Y+  I+  CK     E +S   EM + ++                               
Sbjct: 324 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 383

Query: 291 ----SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PDV TY   ++  C  G+L  AE +L +M K G+  + + YN+L+DG+   G  +
Sbjct: 384 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 443

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLID-----------------GQCKAGNIDAAMGLYTE 389
            A+S+  QMT     PN  T+  L+                  G  KA  +    GL+  
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 503

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M     +P+   ++++++G S+DG  +E   L   M E  I+ +    ++L+    K+ R
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKR 563

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
               L+ ++        G+  P  + Y  ++  L  +GQ  KA ++F + R  +  PD  
Sbjct: 564 Y---LDAWVLVCSMIQHGFI-PQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 619

Query: 510 TYTTMLRGLLR 520
            +  ++ GL++
Sbjct: 620 VWKVIIDGLIK 630



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 183/365 (50%), Gaps = 8/365 (2%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  P+ YT+N+L+ GYC+   V+ A + + +M       +VV++  L++GLC+ G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A   F  M +    P++ +Y  L+ G C A    E + +   M++    P    Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++   C   + + AE +LQ+M+++G+   VVT  ++I+ YCKEG M  AL V   M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            +PNV T+++L+ G C  G +  AM L  +M    + PD V +  LI G   DG+++   
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           RL + M    +    +T ++LI+ L K+GR   A + F    D  +     PN V + ++
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF----DSLETRGIKPNAVTFNSL 292

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC  G+   A K    M S    PD  TY++ +  L + K   + +  + +M++  +
Sbjct: 293 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 352

Query: 540 VPDAV 544
            P  V
Sbjct: 353 KPSTV 357



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 214/506 (42%), Gaps = 68/506 (13%)

Query: 40  NALNSLEIPKFN---PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           +AL  LE+ K     P+V++   L+  F   G + +A+ +  K+    V P     N L+
Sbjct: 164 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI 223

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G    G  +S +     M   GL+AD  TY  LI+  C  G   +A +LFD +  +GI+
Sbjct: 224 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 283

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V +  LI+GLC   K   A      M   G  P+ YTY++ ++  CK+      L F
Sbjct: 284 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 343

Query: 212 YHEMLHHNLQP-----------------------------------NVVTFGVLMDGLCK 236
             EML  +++P                                   +VVT+   M   C 
Sbjct: 344 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 403

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G L  A N  + M+K GV  +   YN L+DGH   G    A+S+  +M      P+ FT
Sbjct: 404 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 463

Query: 297 YNILIK-----------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           Y IL++                 G+    +L    GL   M K   L N  TY+S+++G+
Sbjct: 464 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 523

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            ++G  E+A S+ S M E  +  N   +++L+   CK+     A  L   M+    +P +
Sbjct: 524 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQL 583

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR--ISNALNFF 457
           + +  L+ GL  +G   +   ++        +P       +I GL K G   IS  +   
Sbjct: 584 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 643

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQAL 483
           LE+ +      C P+H  YA + + L
Sbjct: 644 LERMN------CRPSHQTYAMLTEEL 663



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 11/342 (3%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M + G  P+ + +N LI G+C+   +  A  L  +M     + DV +Y  LI+GLC  G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  L  +M +     ++  Y +L+ G C     E+ L +  +M E G  P+   +++
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           ++D +C+      A  +  EM  K L P VV  TA+I+   K+G M + LR+ + M    
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+V+T ++L+ G    G++  A+       +K      +P+ V Y  +I+  C DG I
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLL----NKMRACGVNPDAVTYNLLIRGQCIDGHI 232

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L   M  D L  D  TY  ++  L +  R      L   +   GI P+AV    +
Sbjct: 233 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 292

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           + G  ++G    A++   FL++        + +T  SF+ HL
Sbjct: 293 INGLCKSGKADIAWK---FLEKMVSAGCTPDTYTYSSFIEHL 331


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 251/505 (49%), Gaps = 27/505 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +P+ F  L++           L   R+  + P+ +ACNA+L+ L      D   E ++  
Sbjct: 206 DPASFDLLLLCLPSA----PLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQ-- 255

Query: 111 VLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
              GL   +V +Y +L+   CG G V  A  LFDEM      P VV Y ILIHG C   +
Sbjct: 256 ---GLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGE 309

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  +   M   GV PN   Y +++   C    V+ AL    +M+HH +  +   +  
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++ G C  G+L +A  +F  M + G+  +   Y  LI+G C+AG L EA  +  EM    
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +  D  TY +L+ G C  G++  A  +   M + G+  NVVTY +L DG CK+GD++ A 
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M+ KG+E N  T++SLI+G CKAG +D AM    +M    L PDV  +T LID L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDG 466
            K G +     L +EML+  I P++ T + L++G   +GR+      L + LEK      
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN----- 604

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y ++++  C    +   ++++  M S N+ P+  TY  +++G  +A+ M +
Sbjct: 605 --IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662

Query: 527 VMMLLADMIKMGIVPDAVINQVMVR 551
                 +MI+ G    A     ++R
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIR 687



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/409 (33%), Positives = 210/409 (51%), Gaps = 7/409 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            +  LI  +  +G +E A+      V R +E  P      +++  L  KG+        E
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVE--PNATVYTSVVALLCDKGRVSDALTVVE 353

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +MV   ++ D   Y  ++   C +GD++ A   FDEM  KG+    V YT LI+GLC   
Sbjct: 354 DMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG 413

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EAE + + M    +  +  TY  L+DGYCK   +  A + ++ M+   + PNVVT+ 
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L DGLCK G+++AA      M+  G+  N   YN LI+G CKAG L +AM   ++M+  
Sbjct: 474 ALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAA 533

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + PDV+TY  LI  LC  G+L+ A  LLQ+M   GI   +VTYN L++G+C  G +E  
Sbjct: 534 GLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGG 593

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M EK + PN  T++SL+   C   N+ +   +Y  M  +++ P+   +  LI G
Sbjct: 594 KKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
             K  +MKE    + EM+E     +  + S+LI  L K  +   A   F
Sbjct: 654 HCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLF 702



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 206/392 (52%), Gaps = 9/392 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N +V+++++    + G + +AL      V+ K+ +  A+     +L+G   KG   S   
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYT--TVLSGFCNKGDLVSARR 385

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +++EM   GL  D VTY  LI+  C  G++ +A  +  EM+ + ++   V YT+L+ G C
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              KM EA  +  +M + GV PN+ TY AL DG CK  DV  A E  HEM +  L+ N  
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G L  A      M   G+ P+++ Y  LID  CK+G L  A  L  EM
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I P + TYN+L+ G C  G++EG + LL+ M ++ I  N  TYNSL+  YC   +M
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M  + VEPN  T++ LI G CKA ++  A   + EM+ K        ++AL
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKIT--PSVF 435
           I  L+K     E  +L+ +M +   T  P V+
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 255/531 (48%), Gaps = 10/531 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA 83
           N + SR P      +F  L     P  N   ++ L+      G +E+A  ++ ++   P 
Sbjct: 239 NAVLSRLPLDEAIELFQGL-----PDKNVCSYNILLKVLCGAGRVEDARQLFDEMASPPD 293

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           +     L++G    G+ ++  +  ++MV  G+  +   Y  ++   C +G V  AL + +
Sbjct: 294 VVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVE 353

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M+   +     +YT ++ G CN+  +V A   F  M+  G+  +  TY  L++G C+  
Sbjct: 354 DMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG 413

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           ++  A +   EML   L  + VT+ VL+DG CK G++  A      M + GV PN+  Y 
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L DG CK G++  A  L  EM    +  +  TYN LI GLC  G L+ A   +  M   
Sbjct: 474 ALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAA 533

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  +V TY +LID  CK G++++A  +  +M + G++P +VT++ L++G C +G ++  
Sbjct: 534 GLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGG 593

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L   M+ K++ P+   + +L+       NMK T  +YK M    + P+  T + LI G
Sbjct: 594 KKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K   +  A  F  E  +K      S     Y+A+I+ L    + ++A KLF DMR + 
Sbjct: 654 HCKARSMKEAQYFHNEMIEKGFRLTASS----YSALIRLLNKKKKFVEARKLFHDMRKEG 709

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-AVINQVMVRGY 553
              +   Y   +        +   + L  ++++  IV   A ++Q +V+ +
Sbjct: 710 FTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVKSKAEMDQDVVKDH 760



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 191/374 (51%), Gaps = 7/374 (1%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N+ +YN L+   C    V  A + + EM      P+VVT+G+L+ G C +GEL  A    
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M   GV PN  VY  ++   C  G + +A+++  +M   ++  D   Y  ++ G C  
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G L  A     +M ++G+  + VTY +LI+G C+ G++++A  V  +M  + ++ + VT+
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + L+DG CK G +  A  ++  MV + + P+VV +TAL DGL K G+++    L  EM  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             +  +  T +SLI+GL K G +  A+    +     D     P+   Y  +I ALC  G
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMAD----MDAAGLKPDVYTYTTLIDALCKSG 553

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++ +A  L  +M  + ++P   TY  ++ G   + R+     LL  M++  I P+A    
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613

Query: 548 VMVRGYQENGDLKS 561
            +++ Y    ++KS
Sbjct: 614 SLMKQYCIGNNMKS 627



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 201/404 (49%), Gaps = 15/404 (3%)

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           + R +R+ G+ P+    NA++        ++ A+E +  +       NV ++ +L+  LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLP----DKNVCSYNILLKVLC 273

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G +  A   F  MA     P++  Y  LI G+C  G L  A+ L  +M    + P+  
Sbjct: 274 GAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            Y  ++  LC  G++  A  +++ M    ++ +   Y +++ G+C +GD+  A     +M
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             KG+  + VT+++LI+G C+AG +  A  +  EM+ + L  D V +T L+DG  K G M
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E  +++  M++  + P+V T ++L  GL K G +  A     E ++K        N   
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG----LELNACT 506

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y ++I  LC  G + +A +  +DM +  L+PD  TYTT++  L ++  +     LL +M+
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             GI P  V   V++ G+  +G ++   +  E++ E  I  + T
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 263/516 (50%), Gaps = 14/516 (2%)

Query: 10  LYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIE 69
           L+ +A+ L+  V    + S+       S+ + L   E  K    ++  +I ++ +   + 
Sbjct: 54  LFSHAQSLLLQVISGKIHSQ--FFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLN 111

Query: 70  EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            ++  + ++     +P     N LL  ++    F+  W F+ E     +V DV ++G+LI
Sbjct: 112 LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILI 170

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             CC  G++ K+ +L  E+ + G  P VVIYT LI G C + ++ +A+ +F  M + G+V
Sbjct: 171 KGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLV 230

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
            N  TY  L++G  K     +  E Y +M    + PN+ T+  +M+ LCK G  + A   
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + GV  NI  YN LI G C+   L EA  +  +M+   I+P++ TYN LI G CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           VG+L  A  L + +   G+  ++VTYN L+ G+C++GD   A  +  +M E+G++P+ VT
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ LID   ++ N++ A+ L   M    LVPDV  ++ LI G    G M E  RL+K M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P+    +++I G  K G    AL    E  +K      +PN   Y  +I+ LC +
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE----LAPNVASYRYMIEVLCKE 526

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
            +  +A +L   M    + P     T++L  + RAK
Sbjct: 527 RKSKEAERLVEKMIDSGIDPS----TSILSLISRAK 558



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 188/373 (50%), Gaps = 5/373 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  +++ Y +   +N ++ +++EM+ +   P    F  L+  +          +FF +  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-NEN 155

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K  V  +++ +  LI G C+AG + ++  L  E+ +F  SP+V  Y  LI G C  G++E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ L  +M K G++AN  TY  LI+G  K G  ++   +  +M E GV PN+ T++ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +  CK G    A  ++ EM  + +  ++V +  LI GL ++  + E  ++  +M    I 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++ T ++LI G    G++  AL+  L +  K+ G   SP+ V Y  ++   C  G    
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALS--LCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSG 391

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A+K+  +M    ++P   TYT ++    R+  M   + L   M ++G+VPD     V++ 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451

Query: 552 GYQENGDLKSAFR 564
           G+   G +  A R
Sbjct: 452 GFCIKGQMNEASR 464



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 167/318 (52%), Gaps = 5/318 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y  +I+ + ++ +L  ++S  +EM      P    +N L+  + G            + 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  ++ +V ++  LI G C+ G++EK+  +  ++TE G  PNVV +++LIDG CK G I
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  L+ EM    LV +   +T LI+GL K+G  K+   +Y++M E  + P+++T + +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++ L K+GR  +A   F E  ++  G  C  N V Y  +I  LC + ++ +A+K+   M+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRER--GVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMK 330

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           SD + P+  TY T++ G     ++   + L  D+   G+ P  V   ++V G+   GD  
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390

Query: 561 SAFRCSEFLKESRIGSSE 578
            A +  + ++E  I  S+
Sbjct: 391 GAAKMVKEMEERGIKPSK 408


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 228/421 (54%), Gaps = 14/421 (3%)

Query: 70  EALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           E  WV      ++ +  ++   N ++N L K+GK     EF   M   G+  +VVTY  +
Sbjct: 173 EKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C +G V  A  +FD M  +G++P    Y   I G+C E K+ EA  M   M+E G+
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL---CKVGELRA 242
            P   TYN L+DGYC   ++  A ++  +M+   L P V T+ +L+  L   CK+ E   
Sbjct: 293 RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE--- 349

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M++ G+ P+   YN LI+G+C+ GN+ +A +L  EM    I P   TY  LI 
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            L   G+++ A+ L +K+ ++GI  +++ +N+LIDG+C  G+M++A ++  +M +  V P
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + VTF++L+ G+C+ G ++AA  L  EM  + + PD + +  LI G SK G+MK+  R+ 
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            EML     P++ T ++LI GL KN    +A     E   K      +PN   Y ++I+ 
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG----ITPNDNTYLSLIEG 585

Query: 483 L 483
           +
Sbjct: 586 I 586



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 241/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++  LI A  E+   ++A   +  ++   V+P + ACN +L+  +K  + +  W  Y EM
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + + VVT+ ++I+  C +G + KA      M   GI+P VV Y  +IHG C+  ++
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M+  GV P+ YTY + + G CK   +  A     +M    L+P  VT+  L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G L  A ++   M + G+ P +  YN LI        + EA  +  EM +  +
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYNILI G C  G ++ A  L  +M  +GI    VTY SLI    K G M++A  
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++  KG+ P+++ F++LIDG C  GN+D A  +  EM    +VPD V F  L+ G  
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++G ++    L +EM    I P   + ++LI G  K G + +A   F  + +    G+ +
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA---FRVRDEMLSIGF-N 538

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+IQ LC + +   A +L  +M S  + P++ TY +++ G+
Sbjct: 539 PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 223/415 (53%), Gaps = 4/415 (0%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T V+Y +LI   C   +  +A   F  M+  GV+P+++  N ++  + K     +A   Y
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM    ++ +VVTF ++++ LCK G+L+ A  F   M   G+ PN+  YN +I G+C  
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G +  A  +   M+   + PD +TY   I G+C  G+LE A G+L+KM + G+    VTY
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LIDGYC +G++E A     +M  +G+ P V T++ LI        +D A G+  EM  
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K LVPD V +  LI+G  + GN+K+   L+ EM+   I P+  T +SLI+ L K GR+  
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A + F +   K       P+ +++ A+I   C +G + +A  +  +M    + PD  T+ 
Sbjct: 420 ADDLFEKIVRKG----IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           T+++G  R  ++     L+ +M   GI PD +    ++ GY + GD+K AFR  +
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 530



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 257/505 (50%), Gaps = 14/505 (2%)

Query: 40  NALNSLEIPK--FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKK 97
           N+  SL++ K   N  V+S   + F+E+G     L +   +     I+AC  L  G    
Sbjct: 83  NSKPSLQLLKETINSGVYSIREV-FNELGVARGVLGIKTYVLYDLLIRACCELKRG---- 137

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
              D  +E ++ M   G++  V     ++          KA  L+ EM    I+ +VV +
Sbjct: 138 ---DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTF 194

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            I+I+ LC E K+ +A+     M   G+ PN+ TYN ++ GYC    V  A   +  M  
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++P+  T+G  + G+CK G+L  A      M + G+ P    YN LIDG+C  GNL  
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A     +M +  + P V TYN+LI  L    +++ A+G++++M ++G++ + VTYN LI+
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           GYC+ G+++KA ++  +M  KG++P  VT++SLI    K G +  A  L+ ++V K + P
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D+++F ALIDG   +GNM     + KEM + K+ P   T ++L+ G  + G++  A    
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   +       P+H+ Y  +I      G +  A ++  +M S    P   TY  +++G
Sbjct: 495 EEMKSRG----IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQG 550

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPD 542
           L + +       LL +MI  GI P+
Sbjct: 551 LCKNEEGDHAEQLLKEMISKGITPN 575



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 132/292 (45%), Gaps = 38/292 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  +   G++E A     K+    ++P +   N L++ L    K D      +EM
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLV D VTY +LI+  C  G+V KA  L DEMI KGI+PT V YT LI+ L    +M
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 171 VEAESMF-----------------------------------RSMRECGVVPNLYTYNAL 195
            +A+ +F                                   + M +  VVP+  T+N L
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           M G C+   V  A E   EM    ++P+ +++  L+ G  K G+++ A      M   G 
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
            P +  YN LI G CK      A  L  EM    I+P+  TY  LI+G+  V
Sbjct: 538 NPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/476 (31%), Positives = 252/476 (52%), Gaps = 10/476 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++ +I + N LL  L K   +  V+  Y++M L GL  +  T  +LI+C C    V + L
Sbjct: 87  MMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGL 146

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +    ++ +G  P VV YT LI GLC E+++ EA  +F  M++ G  PN+ TY  L+ G 
Sbjct: 147 SAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGL 206

Query: 200 CKVADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           C+  ++N AL+ + EML+       N +PN+ ++ +++D LCK+G+ + A   F  M   
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQ 266

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV P++  ++ LID  CK G + EA      M    I PD+FT+  LI+G C VG L+ A
Sbjct: 267 GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSA 326

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + L   M  +G   +V++Y  LI GYCK  ++E+A+ + ++M   G  P++ TF  L+ G
Sbjct: 327 KELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG 386

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              AG +  A  L+  +   ++  ++ + +  +DGL K+G + E + L+ E+    +   
Sbjct: 387 LFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           + + + LI GL K  ++  A   F    +K       P+ V Y  +I   C +GQ+  A+
Sbjct: 447 IESFNCLIDGLCKARKLETAWELF----EKLSQEGLQPDVVTYCIMINGFCKNGQVDNAN 502

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            LF  M  +   P+  TY+ +L G  +  ++ +V+ LL  MI+  +   A I  ++
Sbjct: 503 ILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 240/446 (53%), Gaps = 27/446 (6%)

Query: 130 CGQGDVM--KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
           C +G++   +AL  FD M+      +++ + +L+  L       +  S+++ M   G+ P
Sbjct: 70  CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N +T N L++  C V  V   L     ++     P+VVT+  L+ GLC    +  A   F
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM----EKFEIS--PDVFTYNILI 301
           + M K G +PN+  Y  LI G C+ GN+  A+ L  EM      + I+  P++F+YNI+I
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC +G+ + A+ L  +M  +G+  +VVT+++LID  CKEG + +A      M  +G+ 
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++ TF+SLI+G C  G++D+A  L+  M  K   PDV+ +T LI G  K  N++E ++L
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV---LY-- 476
           Y EML     P + T   L+ GLF  G++ +A   F         G   P+ V   LY  
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF---------GVVKPHAVPKNLYIC 415

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           +  +  LC +G + +A +LF++++S N++ D  ++  ++ GL +A+++     L   + +
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            G+ PD V   +M+ G+ +NG + +A
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNA 501



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 208/383 (54%), Gaps = 9/383 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---------IEVLPAIQACNALLNGLIKKGKFD 101
           N   + TLI      G+I  AL ++++         I   P I + N +++ L K GK+ 
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                + EMV  G+  DVVT+  LID  C +G V++A    + M+ +GI P +  +T LI
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    +  A+ +F SM   G  P++ +Y  L+ GYCK  +V  A++ Y+EML     
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++ TF VL+ GL   G++  A   F  +    V  N+++ +  +DG CK G LFEAM L
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            +E++ + +  D+ ++N LI GLC   +LE A  L +K+ +EG+  +VVTY  +I+G+CK
Sbjct: 435 FNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK 494

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G ++ A  +   M E G  PN++T+S+L+ G  K   ++  + L  +M+ K +     +
Sbjct: 495 NGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASI 554

Query: 402 FTALIDGLSKDGNMKETLRLYKE 424
           +T + D +SKD   +E L + + 
Sbjct: 555 YTIVEDMVSKDEKCREWLDILQR 577



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 223/438 (50%), Gaps = 11/438 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
            VF+    + +   +P+ F+   LI     +  + E L     I     +P +    +L+
Sbjct: 109 QVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLI 168

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--- 148
            GL  + +       +  M   G   +VVTYG LI   C  G++  AL L  EM++    
Sbjct: 169 KGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSP 228

Query: 149 ---GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
                +P +  Y I+I  LC   K  EA+ +F  M + GV P++ T++AL+D  CK   V
Sbjct: 229 YAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMV 288

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             A +F   M+   + P++ TF  L++G C VG+L +A   F+ M   G  P++  Y  L
Sbjct: 289 IEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVL 348

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G+CK  N+ EAM L +EM +    PD+ T+ +L+KGL   G++  A+ L   +    +
Sbjct: 349 IYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAV 408

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N+   +  +DG CK G + +A+ + +++    ++ ++ +F+ LIDG CKA  ++ A  
Sbjct: 409 PKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWE 468

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ ++  + L PDVV +  +I+G  K+G +     L++ M E   TP++ T S+L+HG +
Sbjct: 469 LFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFY 528

Query: 446 KNGRISNALNFFLEKTDK 463
           KN ++   +    +   K
Sbjct: 529 KNNKLEEVVKLLHKMIQK 546



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 14/316 (4%)

Query: 252 KFGVFPNIFVYNCLI---DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
           K  +F ++F ++  I   +    + N  +++   SE    +    +F +N      C  G
Sbjct: 20  KAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQHGLPMFIHN------CKKG 73

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            +   + L    + + ++ +++++N L+    K     +  S+  +M   G+ PN  T +
Sbjct: 74  NITSTQAL---QFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLN 130

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            LI+  C    +   +     ++ +  +PDVV +T+LI GL  +  + E  RL+  M + 
Sbjct: 131 ILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKL 190

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD--GGYCSPNHVLYAAIIQALCYD 486
              P+V T  +LI GL + G I+ AL    E  + T      C PN   Y  II  LC  
Sbjct: 191 GCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKI 250

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G+  +A +LF++M    +RPD  T++ ++  L +   +++    L  M+  GIVPD    
Sbjct: 251 GKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTF 310

Query: 547 QVMVRGYQENGDLKSA 562
             ++ G+   GDL SA
Sbjct: 311 TSLIEGFCLVGDLDSA 326


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 264/536 (49%), Gaps = 31/536 (5%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK------FDSV 103
           ++F++L+ A+ +      A  + +K+E     P     N L+  +   G+      F+  
Sbjct: 379 TIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELA 438

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            + Y EM+  G V + V       C CG G   KA  +  EM+  G  P    Y+ +I  
Sbjct: 439 EKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGF 498

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LCN +++  A  +F+ M+  GVVP++YTY  L+D + K   + +A  +  EM+    +P 
Sbjct: 499 LCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPT 558

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+  L+    K  ++  A   F  M   G FPN+  Y  LIDG+CK+GN+ +A  + +
Sbjct: 559 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 618

Query: 284 EMEK----------FEI------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            M            F+I       P+V TY  L+ GLC   +++ A  LL+ M+ +G   
Sbjct: 619 RMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N + Y++LIDG+CK   +++A  V  +M E G  PNV T+SSLID   K   +D  + + 
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           ++M+  S  P++V++T +IDGLSK     E  +L   M E    P+V T +++I G  K 
Sbjct: 739 SKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 798

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G++   L  F E   K     C+PN V Y  +I   C  G + +A  L  +M+       
Sbjct: 799 GKVDKCLELFREMGSKG----CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +Y  ++ G  R    +  + LL ++ K G  P  ++ +V++  + + G L+ A 
Sbjct: 855 VSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 244/508 (48%), Gaps = 51/508 (10%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L    + ++ +  ++EM   G+V DV TY +LIDC    G + +A N
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
             DEM+  G EPTVV YT LIH      K+  A  +F  M   G  PN+ TY AL+DGYC
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 201 KVADVNRALEFYHEM--------------LHHNL--QPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++ +A + Y  M              + +N+  +PNVVT+G L+DGLCK  +++ A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           +    M   G  PN  VY+ LIDG CKA  L EA  +  +M +   +P+V+TY+ LI  L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
               +L+    +L KM +     N+V Y  +IDG  K    ++A  +   M EKG +PNV
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT++++IDG  KAG +D  + L+ EM  K   P+ V +T LI+     G++ E   L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 425 MLEAKI---------------------------------TPSVFTVSSLIHGLFKNGRIS 451
           M +                                     P +     LI    K GR+ 
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 905

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL    E    +       N  LY ++I +  Y  +I  A +LF DM  D + PD  T+
Sbjct: 906 VALELHKEVISASMSMAAKKN--LYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGI 539
             +L GL+R +R  + + L   + +M I
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 248/569 (43%), Gaps = 61/569 (10%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A  ++G   EAL +  K + +P     N +++GL +   F+   +F   M     + +V 
Sbjct: 285 ALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +L+  C  +  + +   +   MI +G  P+  I+  L+H  C  +    A  + + M
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 181 RECGVVPNLYTYNALMDGYCKVADV----------------------------------- 205
            +C   P    YN L+   C   ++                                   
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 206 ------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                  +A +  HEM+ +   P+  T+  ++  LC    +  A   F  M   GV P++
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y  LID   KAG + +A +   EM +    P V TY  LI       ++  A  L + 
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPN 363
           M  +G   NV+TY +LIDGYCK G++EKA  + ++M                     +PN
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+ +L+DG CKA  +  A  L   M +    P+ +V+ ALIDG  K   + E   ++ 
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+E    P+V+T SSLI  LFK+ R    L+  L+   K     C+PN V+Y  +I  L
Sbjct: 705 KMVEHGYNPNVYTYSSLIDRLFKDKR----LDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
               +  +A KL   M     +P+  TYT M+ G  +A ++   + L  +M   G  P+ 
Sbjct: 761 SKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNF 820

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKES 572
           V   V++      G L  A+   E +K++
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQT 849



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 246/563 (43%), Gaps = 73/563 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           +A  E+G +++  + Y+     P     NAL+   ++  K D+    + EM   GL  D 
Sbjct: 224 VALEELGRLKD--FGYK-----PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T G      C  G   +AL+L ++   +   P  ++Y  +I GLC  +   EA      
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY  L+ G      + R       M+     P+   F  L+   CK  +
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDD 393

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL-----FE----------------- 277
              A      M K    P   VYN LI   C  G L     FE                 
Sbjct: 394 FSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN 453

Query: 278 -------AMSLCSEMEKFEIS-------------PDVFTYNILIKGLCGVGQLEGAEGLL 317
                  A  LC    KFE +             PD  TY+ +I  LC   ++E A  L 
Sbjct: 454 KVNVVSFARCLCG-FGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   G++ +V TY  LID + K G +++A +   +M   G EP VVT+++LI    KA
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKIT----- 431
             +  A  L+  M+ K   P+V+ +TALIDG  K GN+++  ++Y  M  +A I      
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632

Query: 432 ----------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
                     P+V T  +L+ GL K  ++ +A +  L +T   DG  C PN ++Y A+I 
Sbjct: 633 FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD--LLETMFVDG--CEPNTIVYDALID 688

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C   ++ +A ++F  M      P+  TY++++  L + KR+  V+ +L+ M++    P
Sbjct: 689 GFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748

Query: 542 DAVINQVMVRGYQENGDLKSAFR 564
           + VI   M+ G  +      A++
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYK 771



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 240/554 (43%), Gaps = 76/554 (13%)

Query: 72  LWVYRKI--EVLPAIQACNALLNGLIKKGKFDSV-WEFYEEM------VLCGLVADVVTY 122
           LW  R+I  +  PA+    ALL+ + ++G +D V  EF  E+      VL  L+      
Sbjct: 159 LWAGRQIGYDHTPAVYI--ALLD-VFERGSYDRVPEEFLREIRGDDKEVLGKLL------ 209

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            VLI  CC  G    AL     + D G +PT + Y  L+      +K+  A+ + R M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 183 CGV--------------------------------VPNLYTYNALMDGYCKVADVNRALE 210
            G+                                VPN   YN ++ G C+ +    A++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F + M   +  PNV T+ +L+ G     +L         M   G +P+  ++N L+  +C
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG------AEGLLQKMYKEG 324
           K+ +   A  L  +MEK E  P    YNILI  +C  G+L G      AE    +M   G
Sbjct: 390 KSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAG 449

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N V   S     C  G  EKA  V  +M   G  P+  T+S +I   C A  ++ A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM    +VPDV  +T LID  SK G +K+      EM+     P+V T ++LIH  
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-- 502
            K  ++S A   F     K     C PN + Y A+I   C  G I KA ++++ MR D  
Sbjct: 570 LKAKKVSVANELFELMIAKG----CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 503 ------------NL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
                       N+  +P+  TY  ++ GL +A ++ D   LL  M   G  P+ ++   
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 549 MVRGYQENGDLKSA 562
           ++ G+ +   L  A
Sbjct: 686 LIDGFCKAAKLDEA 699



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 11/248 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I   S++   +EA  +   +E     P +    A+++G  K GK D   E +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY VLI+ CC  G + +A  L +EM        V  Y  +I G   E
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL----QPN 223
              + +  +   + + G  P +  Y  L+D + K   +  ALE + E++  ++    + N
Sbjct: 869 --FILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKN 926

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + T   L+       ++  A   F  M + GV P++  +  L+ G  +     EA+ L  
Sbjct: 927 LYT--SLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSD 984

Query: 284 EMEKFEIS 291
            + + +I+
Sbjct: 985 SLCQMDIN 992


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 254/505 (50%), Gaps = 10/505 (1%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           PS    +  A S   HI     ++ +  V P  +  N +L+ L+K   F +   F ++M 
Sbjct: 38  PSFIDNVDDAVSSFNHI-----LHMRNPVQPIFEF-NKILSSLVKLNHFHTAISFSKQME 91

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           L  +  D+ T+ +LI+C C  G +  A ++  ++   G  P  V  T LI GLC   K+ 
Sbjct: 92  LKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVR 151

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA      +   G   +  +Y  L++G CK  +   AL+   ++    +QPNVV +  ++
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK   +  A +    M    +FP++  Y  LI G    G L EA+ L ++M    I 
Sbjct: 212 DSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK 271

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV+T+NIL+ GLC  G+++ A  +L  M K+G+ +N+VTYNSL+DGY       KA  V
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFV 331

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M  +GV P+V ++S +I+G CK   +D A+ L+ EM  KS+ P+ V + +LIDGL K
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + +   L  EM        V T SSL+  L KN ++  A+    +  D+       P
Sbjct: 392 YGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG----IQP 447

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  ++  LC +G++  A  ++ D+       D   Y  M+ GL +     + + L+
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV 507

Query: 532 ADMIKMGIVPDAVINQVMVRGYQEN 556
           + M   G +PDAV  + +VR   EN
Sbjct: 508 SKMEDNGCIPDAVTYETLVRALFEN 532



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 246/461 (53%), Gaps = 9/461 (1%)

Query: 44  SLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+ +  P +F+   LI  F  +GH+  A  V  KI  L   P       L+ GL   G
Sbjct: 89  QMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K      F+++++  G   D V+YG LI+  C  G+   AL +  ++    ++P VV+Y 
Sbjct: 149 KVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYN 208

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +I  LC +  ++ A  +   M    + P++ TY  L+ G   V  +  A+  +++ML  
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N++P+V TF +L+DGLCK GE++ A N    M K GV  NI  YN L+DG+       +A
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             + + M +  ++PDV +Y+I+I GLC    ++ A  L ++M+ + +  N VTYNSLIDG
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             K G +  A  + ++M  +G   +V+T+SSL+D  CK   +D A+ L T++  + + P+
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPN 448

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +T L+DGL K+G +K+   +Y+++L       V   + +++GL K G    AL+   
Sbjct: 449 IYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSL-- 506

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
               K +   C P+ V Y  +++AL  + +  KA KL  +M
Sbjct: 507 --VSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 240/457 (52%), Gaps = 4/457 (0%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V  F   + +   V  +  +  ++           A++   +M  K I+P +  + IL
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+   +  A S+   + + G  P+  T   L+ G C    V  AL F+ +++    
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             + V++G L++GLCK GE RAA      +    V PN+ +YN +ID  CK   +  A  
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           LCSEM    I PDV TY  LI G   VG+L+ A GL  +M  + I  +V T+N L+DG C
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG+M+KA +V + M ++GV+ N+VT++SL+DG       + A  ++  M  + + PDV 
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            ++ +I+GL K   + E + L+KEM    + P+  T +SLI GL K GRIS+A +   E 
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            ++        + + Y++++ ALC + Q+ KA  L + ++   ++P+  TYT ++ GL +
Sbjct: 406 HNRGQPA----DVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             R+ D   +  D++  G   D  +  VMV G  + G
Sbjct: 462 NGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEG 498



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 200/375 (53%), Gaps = 3/375 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    + G    AL V RKI+   V P +   N +++ L K        +   EM+
Sbjct: 172 YGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMI 231

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +  +  DVVTY  LI  C   G + +A+ LF++M+ K I+P V  + IL+ GLC E +M 
Sbjct: 232 VKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMK 291

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++   M + GV  N+ TYN+LMDGY  V   N+A   ++ M    + P+V ++ +++
Sbjct: 292 KARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMI 351

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK   +  A N F  M    + PN   YN LIDG  K G + +A  L +EM      
Sbjct: 352 NGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQP 411

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV TY+ L+  LC   Q++ A  L+ K+  +GI  N+ TY  L+DG CK G ++ A +V
Sbjct: 412 ADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAV 471

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +  KG   +V  ++ +++G CK G  D A+ L ++M     +PD V +  L+  L +
Sbjct: 472 YQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFE 531

Query: 412 DGNMKETLRLYKEML 426
           +    + ++L +EM+
Sbjct: 532 NDKNDKAVKLLREMI 546



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 197/389 (50%), Gaps = 4/389 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           V  ++ +N ++    K+   + A+ F  +M    +QP++ TF +L++  C +G L  A +
Sbjct: 61  VQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFS 120

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               + K G  P+      LI G C  G + EA+    ++       D  +Y  LI GLC
Sbjct: 121 VLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLC 180

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +L+K+    +  NVV YN++ID  CK+  +  A  +CS+M  K + P+VV
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+++LI G    G +  A+GL+ +M++K++ PDV  F  L+DGL K+G MK+   +   M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++  +  ++ T +SL+ G F   + + A   F+  T    G   +P+   Y+ +I  LC 
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKAT--FVFNTMARRG--VTPDVQSYSIMINGLCK 356

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
              + +A  LF +M S ++ P+  TY +++ GLL+  R+ D   L+ +M   G   D + 
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              ++    +N  +  A      +K+  I
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGI 445



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 165/309 (53%), Gaps = 5/309 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI     +G ++EA+ ++ ++    + P +   N L++GL K+G+          M+
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+ +++VTY  L+D         KA  +F+ M  +G+ P V  Y+I+I+GLC    + 
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVD 361

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVL 230
           EA ++F+ M    + PN  TYN+L+DG  K   ++ A +  +EM H+  QP +V+T+  L
Sbjct: 362 EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM-HNRGQPADVITYSSL 420

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK  ++  A      +   G+ PNI+ Y  L+DG CK G L +A ++  ++     
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             DV  YN+++ GLC  G  + A  L+ KM   G + + VTY +L+    +    +KA+ 
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVK 540

Query: 351 VCSQMTEKG 359
           +  +M  +G
Sbjct: 541 LLREMIVQG 549


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 256/491 (52%), Gaps = 9/491 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + T+I  F E  H  EA  ++ +   + + P I A N L++ L +KG          +++
Sbjct: 184 YCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVL 243

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  ++ T  + I   C +  + +A+ L D  + +G+ P V+ Y  LI GLC   K+V
Sbjct: 244 KRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVV 302

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EAE   R M   G  P+ +TYN+++DGYCK+  +  A +   +       P+  T+  L+
Sbjct: 303 EAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLC+ G++  A N F    + G+ PN+ + N L+ G  + G + +A+ L +EM +   S
Sbjct: 363 NGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD++TYN++I GLC +G +  A+ L+     +G L +V T+N+LIDGYCK+  ++ A+ +
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M   GV P+V+T++S+++G CKAG  +  MG +  M+ K  VP+++ +  L +   K
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY-CS 470
              ++E L L +EM    +TP V    +L+ G   NG +  A   F     + D  Y  S
Sbjct: 543 ARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF----KRVDEQYKFS 598

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
                Y  +I A      +  A KLF+ M  +   PD+ TY  M+ G  +   +      
Sbjct: 599 HTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSF 658

Query: 531 LADMIKMGIVP 541
           L   I+ G++P
Sbjct: 659 LLVKIEKGLIP 669



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 257/506 (50%), Gaps = 8/506 (1%)

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G I+EA+ V+ +++     P++Q+ NA++N L++   FD   + Y  M   G+V D
Sbjct: 86  YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ + +   C       A  L + M  +G E + V Y  +I G   EN  VEA  +F 
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+ P++  +N L+   C+   V  +    +++L   + PN+ T  + + G C+  
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            L  A      + + G+ P++  YN LI G CK   + EA     +M      PD FTYN
Sbjct: 266 MLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYN 324

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            +I G C +G ++ A+ +L+    +G + +  TY SLI+G C++GD+++A++V ++  EK
Sbjct: 325 SIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK 384

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++PN+V  ++L+ G  + G I  A+ L  EM      PD+  +  +I+GL K G + + 
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L  + +     P VFT ++LI G  K  ++ NA+    E  D+      SP+ + Y +
Sbjct: 445 DNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI----EIVDRMWNHGVSPDVITYNS 500

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           I+  LC  G+       F  M      P+  TY  +     +A+++ + + L+ +M   G
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFR 564
           + PD V    +++G+ +NGDL  A++
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQ 586



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 204/385 (52%), Gaps = 4/385 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I  + ++G ++ A  + R       +P      +L+NGL + G  D     + E 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  ++V    L+     QG +++AL L +EM + G  P +  Y ++I+GLC    +
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A+++       G +P+++T+N L+DGYCK   ++ A+E    M +H + P+V+T+  +
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK G+       F  M + G  PNI  YN L +  CKA  + EA++L  EM+   +
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV-TYNSLIDGYCKEGDMEKAL 349
           +PDV  +  L+KG C  G L+GA  L +++ ++   ++ + TYN +I+ +  + +M  A 
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++M E G  P+  T+  +IDG CK GNI++        + K L+P +  F  +++ L
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681

Query: 410 SKDGNMKETLRLYKEMLEAKITPSV 434
                + E + +   M+   I P V
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVPEV 706



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 162/337 (48%), Gaps = 5/337 (1%)

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G+++ A + F  M  F   P++  YN +++   +     +A  +   M    I PDV+
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           T+ I +K  C   +   A  LL  M  +G  ++ V Y ++I G+ +E    +A  +  +M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G+ P+++ F+ LI   C+ G++  +  L  +++ + + P++      I G  +   +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E +RL  + +   +TP V T ++LI GL KN ++  A ++  +  ++   GY  P+   
Sbjct: 268 NEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE---GY-EPDGFT 322

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +II   C  G +  A ++  D       PD  TY +++ GL +   +   + +  + +
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM 382

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           + G+ P+ V+   +V+G  + G +  A +    + E+
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 253/510 (49%), Gaps = 8/510 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           K N + ++T+I    +   +EEA   +   E L  I +   ++ GL    + D   E +E
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFD--EALDVI-SYTTVIKGLADSKRIDEACELFE 387

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           ++   G   +VV Y  +ID     G +   L  F++M      PT   YT++I GLC   
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ 447

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + +A  +F  M + G VP+  TY  L+DG+ K + ++ A +    ML    +P  VT+G
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ G CK+  +  A      M + G  P +F++  L+  +   G   EA  + +EM   
Sbjct: 508 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
             +PDV  Y  LI  L   G++  A  +   M ++G   + +TY ++I  + K G++E A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M + GV P+   ++SL+DG  K   +D A G+Y  MV   + P+ V F  L+ G
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 409 LSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           L KDG       L+KEMLE  ++ P++ + + LI GL K GR+S A + F E  D+   G
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR---G 744

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                H  Y ++I +L   G+I +A KL  DM    + PD   Y+ ++ GL+ +  +   
Sbjct: 745 IIPECHT-YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             +  +M+K G  P+ V  +V+ RG++  G
Sbjct: 804 WDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 264/534 (49%), Gaps = 15/534 (2%)

Query: 47  IPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFD 101
           + +F P VF  +++I  + + G ++    +  ++     +P   A   L++ L K G+ D
Sbjct: 117 LKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             +E +E M   G + D VT+  LI+     G + +A  L+ EMI++G EP + +   LI
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC   K+ EA  +++++    V  +   YN+LMDGYCK+  V+  L+   +M+  +  
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++ T+ +L+ G  +   L  A   F  ++ +G  PN   Y  +I G   A  + EA + 
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
                 F+ + DV +Y  +IKGL    +++ A  L +K+   G   NVV Y ++IDG  K
Sbjct: 357 ------FDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E  L     M+     P   T++ +IDG CKA  +  A  ++ +MV K  VPD + 
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T LIDG SK   M E  +L   ML     P+  T  S++HG  K   I+ A     +  
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++     C P   ++ +++      G+  +A ++ ++M +    PD   YT+++  L   
Sbjct: 531 ERG----CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            R+ +   +   MI+ G  PDA+    +++ + + G++++A    E + +S +G
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 640



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 233/477 (48%), Gaps = 8/477 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I   ++   I+EA  ++ K++     P + A  A+++GL+K G+ +   + +E+M 
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
               V    TY V+ID  C    +  A  +F++M+ KG  P  + YT LI G    +KM 
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M   G  P   TY +++ G+CK+  +N A E   +M     +P +  F  L+
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
                 G    A      M   G  P++ +Y  LID     G + EA  +   M +   +
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY  +I+    +G +E A  +L+ M K G+  +   YNSL+DGY K   +++A  V
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV-FTALIDGLS 410
             +M   G++PN VTF+ L+ G  K G  D A  L+ EM+ K  VP  +V +T LIDGL 
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E    ++EM++  I P   T +SLI+ L K GRI  A        D    G  +
Sbjct: 726 KAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV---EDMVKLG-VN 781

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           P+   Y+A+I  L     +  A  +F +M      P+  TY  + RG   A R LD+
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 838



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 245/507 (48%), Gaps = 28/507 (5%)

Query: 68  IEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           +EEAL   +++    ++P +  CN +LNGL K  K D   E + EM   G    +V+Y  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK-------MVEAESMF 177
           +I        + +A   F+ MID G EP V+ +T LIHG C   +       + +A   F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R        P+++ Y +++ GYCK  D++   +   EML     P+   + VL+D LCK+
Sbjct: 121 R--------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKL 172

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M K G   +   +  LI+     G L EA  L  EM +    P +   
Sbjct: 173 GRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQ 232

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           + LI  LC  G+++ A  + Q +  + +  + V YNSL+DGYCK G ++  L +  QM E
Sbjct: 233 DSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
               P++ T++ L+ G  +A  +D A+ L+  +      P+   +T +I GL     M+E
Sbjct: 293 CDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEE 352

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
               + E L+      V + +++I GL  + RI  A   F EK  KT G  CSPN V Y 
Sbjct: 353 AKAFFDEALD------VISYTTVIKGLADSKRIDEACELF-EKL-KTAG--CSPNVVAYT 402

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  L   G+I    K F DM   +  P   TYT ++ GL +A+ + D   +   M++ 
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G VPD +    ++ G+ +   +  A +
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARK 489



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/577 (26%), Positives = 259/577 (44%), Gaps = 70/577 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V  +LI A  + G ++EA  +Y+ +   +V  +  A N+L++G  K G+ D   +   +M
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V C    D+ TY +L+        +  AL LF  +   G +P    YT +I GL +  +M
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRM 350

Query: 171 VEAES-----------------------------MFRSMRECGVVPNLYTYNALMDGYCK 201
            EA++                             +F  ++  G  PN+  Y A++DG  K
Sbjct: 351 EEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +   L+ + +M   +  P   T+ V++DGLCK   L  A   F  M + G  P+   
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LIDG  KA  + EA  L   M      P   TY  ++ G C +  +  A+ ++ +M 
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G    +  + SL+  Y  +G  E+A  V ++MT +G  P+V+ ++SLID     G + 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK---ETLRL----------------- 421
            A  ++  M+ K   PD + +  +I   SK GN++   E L L                 
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 422 ---------------YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                          Y  M+ + I P+  T + L+HGLFK+G+   A + F E  +K + 
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDE- 709

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P  V Y  +I  L   G++ +A   F +M    + P+  TYT+++  L +A R+ +
Sbjct: 710 --VPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPE 767

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              L+ DM+K+G+ PD      ++ G  ++  + +A+
Sbjct: 768 AKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 230/449 (51%), Gaps = 17/449 (3%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL+   EM   G+ P VV   I+++GLC   K+ +A  +F  M   G  P + +YN ++
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G   +  ++ A +F++ M+ +  +P+V+ F  L+ G CK G+ +  G+  ++ A     
Sbjct: 63  SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV-GHMLLNQALKRFR 121

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++F+Y  +I G+CKAG+L     +  EM      PD   Y +LI  LC +G+++ A  L
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M K G L + VT+ +LI+     G +++A  +  +M E+G EP +    SLI   CK
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG +D A  +Y  +V K +    V + +L+DG  K G + + L+L  +M+E    P + T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGY-CSPNHVLYAAIIQALCYDGQILKASKL 495
            + L+ G  +  R+ +AL  F     K    Y C PN   Y  IIQ L YD Q ++ +K 
Sbjct: 302 YNILVAGFSRANRLDDALELF-----KLLSSYGCKPNAATYTTIIQGL-YDAQRMEEAKA 355

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F D   D +     +YTT+++GL  +KR+ +   L   +   G  P+ V    ++ G  +
Sbjct: 356 FFDEALDVI-----SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 556 NGDLKSAFRCSEFLKESRIGSSETEGHTT 584
            G ++   +  E +     GSS     TT
Sbjct: 411 AGRIEDGLKNFEDMS----GSSCVPTRTT 435



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 5/276 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++++LI      G + EA  V+  +      P       ++    K G  ++  E  E M
Sbjct: 575 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 634

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D   Y  L+D       V +A  ++D M+  GI+P  V + +L+HGL  + K 
Sbjct: 635 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 694

Query: 171 VEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             A S+F+ M E   V P L +Y  L+DG  K   V+ A   + EM+   + P   T+  
Sbjct: 695 DRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTS 754

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  L K G +  A      M K GV P++  Y+ LI G   +  +  A  +  EM K  
Sbjct: 755 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 814

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
            +P+  TY +L +G    G+    E + Q  + +G+
Sbjct: 815 CAPNEVTYKVLRRGFRAAGRALDLEAVKQH-FSQGV 849



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 5/269 (1%)

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +E A   L++M+  G++ +VV  N +++G CK   ++KA+ +  +M   G EP +V++++
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G      +D A   +  M+     PDV+ FT LI G  K G  +    L  + L+ +
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-R 119

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P VF  +S+IHG  K G +        E         C P+   Y  +I  LC  G++
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEML----AAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +LF  MR      D  T+ T++  L    ++ +   L  +MI+ G  P   +   +
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           +    + G +  A    + +   ++ +S 
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSR 264


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 246/474 (51%), Gaps = 12/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  ++ TLI A  E   + EAL +   + ++   P +Q  N +++GL + G+     +  
Sbjct: 239 NSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLL 298

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+L G   D +TYG L+   C  G V +A  L +++ +    P  V+Y  LI G    
Sbjct: 299 DRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVAS 354

Query: 168 NKMVEAESM-FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +  EA+ + + +M   G  P+ YT+N ++DG  K   +  ALE  +EM+    +PNV+T
Sbjct: 355 GRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVIT 414

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L++G CK G L  A      M+  G+  N   YNCLI   CK GN+ EA+ L  EM 
Sbjct: 415 YTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD++T+N LI GLC   ++E A  L   M+ EG++AN VTYN+L+  +     ++
Sbjct: 475 GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M  +G   + +T++ LI   CK G ++  +GL+ EM+ K + P ++    LI
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILI 594

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL + G + + L+  ++M+   +TP + T +SLI+GL K G +  A N F    +K   
Sbjct: 595 SGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLF----NKLQS 650

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               P+ + Y  +I   C++G    A  L          P+  T++ ++  +++
Sbjct: 651 EGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 239/482 (49%), Gaps = 9/482 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L+ L+           + +M+  G+   V T+GV++   C   +V  A +L
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  VIY  LIH LC  N++ EA  +   M      P++ T+N ++ G C+
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A +    ML      + +T+G LM GLC++G++  A      +      PN  +
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVL 343

Query: 262 YNCLIDGHCKAGNLFEAMSLC-SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           YN LI G+  +G   EA  L  + M      PD +T+NI+I GL   G L  A  LL +M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +    NV+TY  LI+G+CK+G +E+A  + + M+ KG+  N V ++ LI   CK GNI
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ L+ EM  K   PD+  F +LI+GL K+  M+E L LY +M    +  +  T ++L
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +H       I  A     E   +     C  +++ Y  +I+ALC  G + K   LF +M 
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRG----CPLDNITYNGLIKALCKTGAVEKGLGLFEEML 579

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              + P   +   ++ GL R  ++ D +  L DMI  G+ PD V    ++ G  + G ++
Sbjct: 580 GKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQ 639

Query: 561 SA 562
            A
Sbjct: 640 EA 641



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 243/507 (47%), Gaps = 44/507 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +     ++  L    + DS      +M   G V + V Y  LI   C    V +AL
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEAL 260

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L ++M     EP V  +  +IHGLC   ++ EA  +   M   G   +  TY  LM G 
Sbjct: 261 QLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGL 320

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN-FFVHMAKFGVFPN 258
           C++  V+ A      +L+    PN V +  L+ G    G    A +  + +M   G  P+
Sbjct: 321 CRMGQVDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPD 376

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            + +N +IDG  K G L  A+ L +EM      P+V TY ILI G C  G+LE A  ++ 
Sbjct: 377 AYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVN 436

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G+  N V YN LI   CK+G++E+AL +  +M+ KG +P++ TF+SLI+G CK  
Sbjct: 437 SMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496

Query: 379 NIDAAMGLYTEMVIKSLVP-----------------------------------DVVVFT 403
            ++ A+ LY +M ++ ++                                    D + + 
Sbjct: 497 KMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYN 556

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI  L K G +++ L L++EML   I P++ + + LI GL + G++++AL F  +   +
Sbjct: 557 GLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR 616

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +P+ V Y ++I  LC  G + +AS LF+ ++S+ +RPD  TY T++        
Sbjct: 617 G----LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMV 550
             D  +LL   +  G +P+ V   +++
Sbjct: 673 FNDACLLLYKGVDSGFIPNEVTWSILI 699



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 215/449 (47%), Gaps = 22/449 (4%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID     GD      L  +M D+G+     ++ +++          +A  +   M   
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMW-- 161

Query: 184 GVV---PNLYTYNA----LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           GV    P   +YN     L+DG C     N     +++ML   + P V TFGV+M  LC 
Sbjct: 162 GVYSCDPTFKSYNVVLDILVDGDCPRVAPN----VFYDMLSRGVSPTVYTFGVVMKALCM 217

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           V E+ +A +    MAK G  PN  +Y  LI   C+   + EA+ L  +M      PDV T
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQT 277

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N +I GLC  G++  A  LL +M   G   + +TY  L+ G C+ G +++A ++ +++ 
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP 337

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMG-LYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
                PN V +++LI G   +G  + A   LY  MVI    PD   F  +IDGL K G +
Sbjct: 338 ----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              L L  EM+  +  P+V T + LI+G  K GR+  A     E  +       S N V 
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA----AEIVNSMSAKGLSLNTVG 449

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I ALC DG I +A +LF +M     +PD  T+ +++ GL +  +M + + L  DM 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             G++ + V    +V  +     ++ AF+
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFK 538



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 190/370 (51%), Gaps = 4/370 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEAL-WVYRKIEVL---PAIQACNALLNGLIKKGKFD 101
           +IP  N  +++TLI  +   G  EEA   +Y  + +    P     N +++GL+KKG   
Sbjct: 335 KIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLV 394

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           S  E   EMV      +V+TY +LI+  C QG + +A  + + M  KG+    V Y  LI
Sbjct: 395 SALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLI 454

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC +  + EA  +F  M   G  P++YT+N+L++G CK   +  AL  YH+M    + 
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N VT+  L+        ++ A      M   G   +   YN LI   CK G + + + L
Sbjct: 515 ANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGL 574

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P + + NILI GLC  G++  A   LQ M   G+  ++VTYNSLI+G CK
Sbjct: 575 FEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +++A ++ +++  +G+ P+ +T+++LI   C  G  + A  L  + V    +P+ V 
Sbjct: 635 MGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVT 694

Query: 402 FTALIDGLSK 411
           ++ LI+ + K
Sbjct: 695 WSILINYIVK 704



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 157/337 (46%), Gaps = 44/337 (13%)

Query: 43  NSLEIPKFNPS--VFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLI 95
           N++ I  + P    F+ +I    + G++  AL      V ++ E  P +     L+NG  
Sbjct: 366 NNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE--PNVITYTILINGFC 423

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K+G+ +   E    M   GL  + V Y  LI   C  G++ +AL LF EM  KG +P + 
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIY 483

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY---------------- 199
            +  LI+GLC  +KM EA S++  M   GV+ N  TYN L+  +                
Sbjct: 484 TFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543

Query: 200 -------------------CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
                              CK   V + L  + EML   + P +++  +L+ GLC+ G++
Sbjct: 544 LFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKV 603

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A  F   M   G+ P+I  YN LI+G CK G++ EA +L ++++   I PD  TYN L
Sbjct: 604 NDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTL 663

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           I   C  G    A  LL K    G + N VT++ LI+
Sbjct: 664 ISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 11/167 (6%)

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKI--TPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           LID L   G+ K   +L K+M +  +    S+F +    +G  K G    A    L+   
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYG--KAGLPGQATRLLLDMW- 161

Query: 463 KTDGGY-CSPNHVLYAAIIQALCYDGQILK-ASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
              G Y C P    Y  ++  L  DG   + A  +F DM S  + P   T+  +++ L  
Sbjct: 162 ---GVYSCDPTFKSYNVVLDILV-DGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCM 217

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
              +     LL DM K G VP++VI Q ++    EN  +  A +  E
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLE 264


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 266/512 (51%), Gaps = 9/512 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STL+   ++   ++ AL +  ++    V P +   NALL G  K G+F+ V   ++++
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKL 254

Query: 111 VL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           V   G   ++ TY V++D  C  G   +   +++ M+   ++P V+ Y ILIHGLC    
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  ++  + + G+V +   YN+L+ G+C+   V  A +F+       L+ N+ T+ +
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNI 373

Query: 230 LMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++ GL   G +  A   +  + K     P+   +  LI G C+ G   +A ++  E    
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVS 433

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
               DVF+Y+ +I GLC VG+L  A  + +KM K+G   N   YN+LI G+C+      A
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + + S+M + G  P V+T+++LIDG CKA     A  +  EMV     PD+  + +LI G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L  D  + + L ++K++L   +   V   + LIHGL   G++  AL+ F +  +K +   
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN--- 610

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN V Y  ++  L   G I KA+ L++ +  D L PD  +Y T ++GL    R+ + +
Sbjct: 611 CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGI 670

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            LL +++  GI+P  +   ++VR   + G ++
Sbjct: 671 QLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 202/372 (54%), Gaps = 8/372 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA--LWVYRKIEVLPAIQACNALLNGLIKKGKFDS---VWE 105
           + +++++L+  F + G ++EA   W       L  ++  N ++ GL   G  D    +W+
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD 392

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             E+ V C  + D VT+G LI   C  G   KA  +F+E    G +  V  Y+ +I+GLC
Sbjct: 393 LLEKDVAC--IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N  ++V+A  ++  M + G  PN + YNAL+ G+C+V   + A+  Y +M  +   P V+
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+DGLCK  + + A +    M + G  P+I  Y  LI G      + +A+S+  ++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGD 344
               +  DV  +NILI GLC  G+++ A  +   M  K+    N+VTYN+L+DG  + G 
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++KA ++ + +TE G+EP+++++++ I G C    I   + L  E++ + ++P V+ +  
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNI 690

Query: 405 LIDGLSKDGNMK 416
           L+  + K G ++
Sbjct: 691 LVRAVIKYGPIQ 702



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 214/455 (47%), Gaps = 44/455 (9%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG----VVPNLYTYNALMDGYCKVAD 204
           G  P +  +  L+       +  +A++ F S+        + PNL TYN ++   C   D
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++RA+  +  +    + P+ +T+  LM GL K   L  A +    M + GV P++  YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
           L+ G  KAG   + M +  ++ K     P++ TYN+++ GLC  G+ +    + ++M   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            +  +V+TY  LI G C+ GD++ A  V S++ + G+  +   ++SL+ G C+AG +  A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 384 MGLYTE-------------MVIKSL----------------------VPDVVVFTALIDG 408
              +               ++IK L                      +PD V F  LI G
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L ++G   +   +++E   +     VF+ SS+I+GL   GR+ +A+  + EK DK DG  
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY-EKMDK-DG-- 469

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN  +Y A+I   C   +   A +++S M  +   P   TY T++ GL +A++  +  
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +  +M++ G  PD      ++RG   +  +  A 
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 176/353 (49%), Gaps = 30/353 (8%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK----FEISPDVFTYNILIKGLCGVG 308
            G  P I  +N L+D   +A    +A +  + +        I+P++ TYNI+++ LC  G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            L+ A  L   + +  +  + +TY++L+ G  K+  ++ AL +  +M   GV+P+VV ++
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +L+ G  KAG  +  M ++ ++V      P++  +  ++DGL K G  KE   +++ M+ 
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGYCSPNHVLYAAIIQALCY 485
             + P V T   LIHGL ++G +  A   + E  KT          +  +Y ++++  C 
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI------DAAMYNSLVKGFCQ 346

Query: 486 DGQILKASKL-----FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI- 539
            G++ +A K      F+ +R  NLR    TY  M++GL  +  M+D  + L D+++  + 
Sbjct: 347 AGRVQEAWKFWDSAGFAGLR--NLR----TYNIMIKGLFDSG-MVDEAIELWDLLEKDVA 399

Query: 540 -VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            +PD V    ++ G  +NG    AF      +E+R+   + +  +  S +  L
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAF---TIFEEARVSGKQLDVFSYSSMINGL 449


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 236/470 (50%), Gaps = 8/470 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N+L+ G  +  + D   + +++M L G   DVV+Y  LI+  C  G + +A+ L
Sbjct: 186 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 245

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM     +P + +Y  L+ GLCN  +  E   M R M+E G  P+   Y A++D  C+
Sbjct: 246 FGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 301

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A E   EM    L P VVT   +++  CK G +  A      M   G  PN++ 
Sbjct: 302 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 361

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G C  G + +AM+L ++M    ++PD  TYN+LI+G C  G +E A  LL+ M 
Sbjct: 362 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 421

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G++A+  TYN+LI+  CK+G  ++A S+   +  +G++PN VTF+SLI+G CK+G  D
Sbjct: 422 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 481

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A     +MV     PD   +++ I+ L K    +E L    EML+  + PS    + +I
Sbjct: 482 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 541

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           H L K          + E         C+P+ V Y   ++A C +G++ +A  +  +M  
Sbjct: 542 HKLLKERNYGLVARTWGEMVSSG----CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 597

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + +  D   Y T++ G     +    + +L  M  +  VP+     +++R
Sbjct: 598 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 208/442 (47%), Gaps = 8/442 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY  +I   C + D+ +AL     M+  G  P    +  LI G C  N++  A  +F  M
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G   ++ +Y  L++G C+   ++ A+E + EM     QP++  +  L+ GLC     
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERG 270

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
                    M + G  P+   Y  ++D  C+     EA  +  EM +  ++P V T   +
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I   C  G++  A  +L+ M   G   NV TYN+L+ G+C EG + KA+++ ++M   GV
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ VT++ LI GQC  G+I++A  L   M    L+ D   + ALI+ L KDG   +   
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 450

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+  +    I P+  T +SLI+GL K+G+   A  F     +K     C+P+   Y++ I
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL----EKMVSAGCTPDTYTYSSFI 506

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           + LC      +      +M   +++P    YT ++  LL+ +    V     +M+  G  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           PD V     +R Y   G L  A
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEA 588



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 236/519 (45%), Gaps = 24/519 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ L+         EE L + R+++ L   P+ +A  A+++   ++ K     E  +EM
Sbjct: 256 MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM 315

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL   VVT   +I+  C +G +  AL + + M  +G +P V  Y  L+ G CNE K+
Sbjct: 316 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 375

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A ++   MR CGV P+  TYN L+ G C    +  A      M    L  +  T+  L
Sbjct: 376 HKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL 435

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LCK G    A + F  +   G+ PN   +N LI+G CK+G    A     +M     
Sbjct: 436 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 495

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD +TY+  I+ LC +   +     + +M ++ +  + V Y  +I    KE +      
Sbjct: 496 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 555

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M   G  P+VVT+++ +   C  G ++ A  +  EM    +  D + +  L+DG +
Sbjct: 556 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 615

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIH-----------------GLFKNGRISNA 453
             G     + + K+M      P+ FT   L+                  G++K   +++ 
Sbjct: 616 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 675

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              F    D        PN   Y++I++    DG+  +A+ L S M+ D++  +   YT 
Sbjct: 676 FGLF----DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 731

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           ++    ++KR LD  +L+  MI+ G +P  +  Q ++ G
Sbjct: 732 LVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSG 770



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 9/408 (2%)

Query: 138 ALNLFDEMIDKGIE-PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           AL LF  M       PT   Y  +I  LC    +  A      M   G  P+ YT+N+L+
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYC+   V+ A + + +M       +VV++  L++GLC+ G +  A   F  M +    
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---- 251

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++ +Y  L+ G C A    E + +   M++    P    Y  ++   C   + + AE +
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 311

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           LQ+M+++G+   VVT  ++I+ YCKEG M  AL V   M  +G +PNV T+++L+ G C 
Sbjct: 312 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 371

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +  AM L  +M    + PD V +  LI G   DG+++   RL + M    +    +T
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI+ L K+GR   A + F    D  +     PN V + ++I  LC  G+   A K  
Sbjct: 432 YNALINALCKDGRTDQACSLF----DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             M S    PD  TY++ +  L + K   + +  + +M++  + P  V
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 535



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 219/491 (44%), Gaps = 56/491 (11%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C A++N   K+G+        E M L G   +V TY  L+   C +G V KA+ L
Sbjct: 322 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 381

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++M   G+ P  V Y +LI G C +  +  A  + R M   G++ + YTYNAL++  CK
Sbjct: 382 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               ++A   +  +    ++PN VTF  L++GLCK G+   A  F   M   G  P+ + 
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEI------------------------------- 290
           Y+  I+  CK     E +S   EM + ++                               
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561

Query: 291 ----SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PDV TY   ++  C  G+L  AE +L +M K G+  + + YN+L+DG+   G  +
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLID-----------------GQCKAGNIDAAMGLYTE 389
            A+S+  QMT     PN  T+  L+                  G  KA  +    GL+  
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 681

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M     +P+   ++++++G S+DG  +E   L   M E  I+ +    ++L+    K+ R
Sbjct: 682 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKR 741

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
               L+ ++        G+  P  + Y  ++  L  +GQ  KA ++F + R  +  PD  
Sbjct: 742 Y---LDAWVLVCSMIQHGFI-PQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 797

Query: 510 TYTTMLRGLLR 520
            +  ++ GL++
Sbjct: 798 VWKVIIDGLIK 808



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 214/506 (42%), Gaps = 68/506 (13%)

Query: 40  NALNSLEIPKFN---PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           +AL  LE+ K     P+V++   L+  F   G + +A+ +  K+    V P     N L+
Sbjct: 342 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI 401

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G    G  +S +     M   GL+AD  TY  LI+  C  G   +A +LFD +  +GI+
Sbjct: 402 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 461

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V +  LI+GLC   K   A      M   G  P+ YTY++ ++  CK+      L F
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 521

Query: 212 YHEMLHHNLQP-----------------------------------NVVTFGVLMDGLCK 236
             EML  +++P                                   +VVT+   M   C 
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G L  A N  + M+K GV  +   YN L+DGH   G    A+S+  +M      P+ FT
Sbjct: 582 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 641

Query: 297 YNILIK-----------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           Y IL++                 G+    +L    GL   M K   L N  TY+S+++G+
Sbjct: 642 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 701

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            ++G  E+A S+ S M E  +  N   +++L+   CK+     A  L   M+    +P +
Sbjct: 702 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQL 761

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR--ISNALNFF 457
           + +  L+ GL  +G   +   ++        +P       +I GL K G   IS  +   
Sbjct: 762 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 821

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQAL 483
           LE+ +      C P+H  YA + + L
Sbjct: 822 LERMN------CRPSHQTYAMLTEEL 841



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 177/381 (46%), Gaps = 11/381 (2%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F H   H    P   T+  ++  LC+  +L  A  +   M + G  P+ + +N LI G+C
Sbjct: 140 FAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYC 199

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           +   +  A  L  +M     + DV +Y  LI+GLC  G+++ A  L  +M +     ++ 
Sbjct: 200 RTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMH 255

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y +L+ G C     E+ L +  +M E G  P+   +++++D +C+      A  +  EM
Sbjct: 256 MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM 315

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K L P VV  TA+I+   K+G M + LR+ + M      P+V+T ++L+ G    G++
Sbjct: 316 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 375

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A+       +K      +P+ V Y  +I+  C DG I  A +L   M  D L  D  T
Sbjct: 376 HKAMTLL----NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           Y  ++  L +  R      L   +   GI P+AV    ++ G  ++G    A++   FL+
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK---FLE 488

Query: 571 ESRIGSSETEGHTTRSFLGHL 591
           +        + +T  SF+ HL
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHL 509


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 294/626 (46%), Gaps = 100/626 (15%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I++V+A   + ++      D+ E + +    HHV  S F+ L+SL     N         
Sbjct: 166 IWWVIARIGVLRSG-----DLVEFMWRG---HHVYESDFSVLDSLMRAFVN--------- 208

Query: 61  AFSEMG-HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-------- 111
             +EMG    E L   R++ V P+      L   L++ G + +VW+ +++++        
Sbjct: 209 --AEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCK 266

Query: 112 --LCGLV-------------------------ADVVTYGVLIDCCCGQGDVMKALNLFDE 144
               G++                          +   Y ++I+ CC +G    AL  F+ 
Sbjct: 267 YTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNL 326

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI++G  PTVV +  +I+  C E  +VEA  +F  ++E G  PN   YN LM+GY K+ +
Sbjct: 327 MIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE 386

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDG------------------------------- 233
           +++A   Y EM    + P+ +TF +L+ G                               
Sbjct: 387 IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDI 446

Query: 234 ----LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG---NLFEAMSLCSEME 286
               LC  G L  A  F + M + G+ P+I  +N +I  + +AG     FEA  L   M 
Sbjct: 447 SVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKL---MV 503

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            F ++P   T + L+ GL   G+L+ A  L+ +M ++G+  N + +  L+D + K GD+ 
Sbjct: 504 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 563

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A S+  +M  +G+ P+VV FS+ IDG  K G ++ A  ++ EM+ K L+P+   + +LI
Sbjct: 564 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 623

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G + E L+L K M    + P +FT + +I GL K GR+ +A+N F+   D    
Sbjct: 624 CGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM---DMHQT 680

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G  SP+ + Y  +I   C    ++ A  L + M +    PD  TY   + G   ++RM  
Sbjct: 681 G-LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNR 739

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRG 552
            +++L +++  GIVP+ V    M+ G
Sbjct: 740 AVLMLDELVSAGIVPNTVTYNSMLNG 765



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 202/398 (50%), Gaps = 4/398 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ L+    + G  E+   + + I VL   P     +  ++GL   G+ D   EF  +M
Sbjct: 408 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 467

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL   ++ +  +I      G   KA   +  M+  G+ P+    + L+ GL    ++
Sbjct: 468 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 527

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M E G+  N   +  L+D + K  DV  A   + EM    + P+VV F   
Sbjct: 528 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 587

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G +  A N F+ M + G+ PN F YN LI G CK G L EA+ L   M    +
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+FT N++I GLC  G++  A  +   M++ G+  +++TYN+LI+GYCK  DM  A +
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M   G  P++ T++  I G C +  ++ A+ +  E+V   +VP+ V + ++++G+ 
Sbjct: 708 LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC 767

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            D  +   + L   +L+    P+V T + L+   +K G
Sbjct: 768 SD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 239/513 (46%), Gaps = 47/513 (9%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           NP+V  F+T+I AF + G++ EA  ++  ++ +   P     N L+NG +K  + D    
Sbjct: 333 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 392

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            YEEM   G+  D +T+ +L+      G       L  ++   G+ P   ++ I + GLC
Sbjct: 393 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 452

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA      M E G+ P++  +N+++  Y +    ++A E Y  M+H  L P+  
Sbjct: 453 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 512

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   L+ GL   G L+ A      M + G+  N   +  L+D   K G++  A SL  EM
Sbjct: 513 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 572

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+  I PDV  ++  I GL   G +E A  +  +M ++G++ N   YNSLI G+CK G +
Sbjct: 573 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 632

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL +   M  +G+ P++ T + +I G CK G + +A+ ++ +M    L PD++ +  L
Sbjct: 633 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 692

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  K  +M     L   M  +   P + T +  IHG   + R++ A+       D+  
Sbjct: 693 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML----DELV 748

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN V Y +++  +C D                                     +L
Sbjct: 749 SAGIVPNTVTYNSMLNGVCSD-------------------------------------IL 771

Query: 526 D-VMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D  M+L A ++KM  VP+ V   +++  + + G
Sbjct: 772 DRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 4/370 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S+F   +      G ++EA+ ++   +E  + P+I A N+++    + G  D  +E Y+ 
Sbjct: 442 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKL 501

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  GL     T   L+      G + +A  L  +MI+KG+    + +T+L+        
Sbjct: 502 MVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGD 561

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +V A+S++  M   G+ P++  ++A +DG  K   V  A   + EML   L PN   +  
Sbjct: 562 VVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNS 621

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G CK G+L  A      M   G+ P+IF  N +I G CK G +  A+++  +M +  
Sbjct: 622 LICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG 681

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +SPD+ TYN LI G C    +  A+ L+ +MY  G   ++ TYN  I G+C    M +A+
Sbjct: 682 LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAV 741

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  ++   G+ PN VT++S+++G C +  +D AM L   ++  + VP+VV    L+   
Sbjct: 742 LMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLSQF 800

Query: 410 SKDGNMKETL 419
            K G  + TL
Sbjct: 801 YKQGMPERTL 810



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 179/347 (51%), Gaps = 39/347 (11%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVW 104
            +PS+  F+++I A+S+ G  ++A   Y+      + P+   C++LL GL   G+     
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 531

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   +M+  GL  + + + VL+D    +GDV+ A +L+ EM  +GI P VV ++  I GL
Sbjct: 532 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 591

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             +  + EA ++F  M   G++PN + YN+L+ G+CK   +N AL+    M H  L P++
Sbjct: 592 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDI 651

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T  +++ GLCK G +R+A N F+ M + G+ P+I  YN LI+G+CKA ++  A +L + 
Sbjct: 652 FTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNR 711

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN---------------- 328
           M     +PD+ TYNI I G C   ++  A  +L ++   GI+ N                
Sbjct: 712 MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDIL 771

Query: 329 ------------------VVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
                             VVT N L+  + K+G  E+ L    +++E
Sbjct: 772 DRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSE 818



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 7/338 (2%)

Query: 234 LCKVGELRAAGNFFVHMAK-FGVFPNIF-VYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           + ++G LR+ G+    M +   V+ + F V + L+     A   F+A+ +   M +  + 
Sbjct: 170 IARIGVLRS-GDLVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVR 228

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P      IL K L  VG       L + + + G      T++ +I G+C++G +    S+
Sbjct: 229 PSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESL 288

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M +   EPN   ++ +I+  C  G    A+  +  M+ +   P VV F  +I+   K
Sbjct: 289 LHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCK 348

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +GN+ E  +L+  + E   +P+    ++L++G  K   I  A N   E+  K      +P
Sbjct: 349 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA-NMLYEEMRKKG---IAP 404

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + +  ++      G+     +L  D+    L PD   +   + GL  A R+ + M  L
Sbjct: 405 DGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFL 464

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            DM++ G+ P  +    ++  Y + G    AF   + +
Sbjct: 465 MDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 502


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 247/475 (52%), Gaps = 4/475 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N+L++G  K G  ++ +   E M   G+  DVV Y  L+   C  G+V  A ++ D M  
Sbjct: 178 NSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKR 237

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+EP VV YT+ I   C  N + +A S++  M   GV+P++ T +AL+ G CK    + 
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + EM      PN VT+ +L+D L K      + +    +   GV  ++ +Y  L+D
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CK G + EA  +         +P+  TY +LI  LC  G ++GAE +L +M ++ I  
Sbjct: 358 WLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISP 417

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVT++S+I+G  K G + KA     +M E+G++PNVVT+ ++IDG  K    +AA+ +Y
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVY 477

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+ + +  +  +  +L++GL K+G +++   L++EM E  +       ++LI GLFK 
Sbjct: 478 HEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT 537

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +  A     E T+K       P+ V+Y   I  LC  G+  +A     +M+S  L+PD
Sbjct: 538 GNLPAAFKVGQELTEKN----LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             TY TM+    R  +    + LL  M +  I P+ +    ++ G  E G ++ A
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA 648



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 263/520 (50%), Gaps = 15/520 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++  I+ +     +++A  +Y ++    VLP +   +AL+ GL K G+F   +  +
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY +LID         ++L+L  E++ +G+   +++YT L+  LC E
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA+ MFR        PN  TY  L+D  CK  +V+ A +   EM   ++ PNVVTF
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GL K G +  A ++   M + G+ PN+  Y  +IDG  K      A+ +  EM  
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLC 482

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G++E AE L ++M + G+L + V Y +LIDG  K G++  
Sbjct: 483 EGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPA 542

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  V  ++TEK + P+ V ++  I+  C  G    A     EM    L PD V +  +I 
Sbjct: 543 AFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIA 602

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             S++G   + L+L   M  + I P++ T S+LI GLF+ G +  A  + L   + +  G
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA-KYLL--NEMSSSG 659

Query: 468 YCSPNHVLYAAIIQALCYDGQ----ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           + SP  + +  ++QA C  G+    IL+  +    M +  L  D   Y T++R L     
Sbjct: 660 F-SPTSLTHRRVLQA-CSQGRRSDLILEIHEW---MMNAGLCADITVYNTLVRVLCYNGM 714

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
               M++L +M   GI PD +    ++ G+ ++G L +AF
Sbjct: 715 TRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAF 754



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 271/559 (48%), Gaps = 50/559 (8%)

Query: 40  NALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           +AL+    P  N   ++ LI A  + G+++ A  V  ++E   + P +   ++++NGL+K
Sbjct: 374 HALSDNHTP--NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVK 431

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC---CCGQGDVMKALNLFDEMIDKGIEPT 153
           +G      ++  EM   G+  +VVTYG +ID    C GQ     AL+++ EM+ +G+E  
Sbjct: 432 RGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ---EAALDVYHEMLCEGVEVN 488

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
             I   L++GL    K+ +AE++FR M E GV+ +   Y  L+DG  K  ++  A +   
Sbjct: 489 KFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQ 548

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+   NL P+ V + V ++ LC +G+ + A +F   M   G+ P+   YN +I    + G
Sbjct: 549 ELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREG 608

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE---------- 323
              +A+ L + M++  I P++ TY+ LI GL   G +E A+ LL +M             
Sbjct: 609 KTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHR 668

Query: 324 -------------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
                                    G+ A++  YN+L+   C  G   KA+ V  +M+ +
Sbjct: 669 RVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+ +TF++LI G  K+G++D A   Y +M+   + P+V  F  L+ GL   G + E+
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             +  EM +  I PS  T   L+ G  K      A+  + E   K   G+  P    Y A
Sbjct: 789 DMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGK---GFL-PKVSTYNA 844

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G + +A +LF++M++  + P +CTY  ++ G  + +   +V   L DM + G
Sbjct: 845 LISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904

Query: 539 IVPDAVINQVMVRGYQENG 557
             P       + R + + G
Sbjct: 905 FSPSKGTLSSISRAFSKPG 923



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 207/447 (46%), Gaps = 39/447 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           ++L+NGL K GK +     + EM   G++ D V Y  LID     G++  A  +  E+ +
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K + P  V+Y + I+ LC   K  EAES    M+  G+ P+  TYN ++    +     +
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP---------- 257
           AL+  + M   +++PN++T+  L+ GL + G +  A      M+  G  P          
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 258 -------------------------NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
                                    +I VYN L+   C  G   +AM +  EM    I+P
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  T+N LI G    G L+ A     +M   GI  NV T+N+L+ G    G + ++  V 
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M ++G+EP+ +T+  L+ G  K  N   A+ LY EMV K  +P V  + ALI   SK 
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV 852

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G M +   L+ EM    + P+  T   L+ G  K  R    +  FL+  D  + G+ SP+
Sbjct: 853 GMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL-RNGTEVRKFLK--DMKEKGF-SPS 908

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDM 499
               ++I +A    G   +A +L  ++
Sbjct: 909 KGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 54/347 (15%)

Query: 30  KPHHVCYSVFNA--------------LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALW 73
           KP  V Y+   A              LN ++     P++  +STLI+   E G +E+A +
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650

Query: 74  VYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
           +  ++      P       +L    +  + D + E +E M+  GL AD+  Y  L+   C
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710

Query: 131 GQGDVMKAL-----------------------------------NLFDEMIDKGIEPTVV 155
             G   KA+                                   + +D+M+  GI P V 
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            +  L+ GL +  ++ E++ +   M++ G+ P+  TY+ L+ GY K ++   A+  Y EM
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +     P V T+  L+    KVG +  A   F  M   GV P    Y+ L+ G  K  N 
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNG 890

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
            E      +M++   SP   T + + +     G    A  LL+ +YK
Sbjct: 891 TEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 257/518 (49%), Gaps = 30/518 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+  F  MGH++EA  +  +++   + P +   N L++ L K+GK  +     
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVL 296

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M+   +  DVVTY  LID       V  A  +F  M   G+ P V  YT +I GLC E
Sbjct: 297 AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKE 356

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA S+F  M+   ++P++ TY +L+DG CK   + RA+    +M    +QP+V ++
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+D LCK G L  A  FF  +   G   N+  YN +I+G CKA    EAM L S+ME 
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG----------------------- 324
               PD  T+  +I  L    + + AE +L++M   G                       
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I  +VVTY +L+DGY    +++ A  V   M + GV PNV  ++ +IDG CK   +D AM
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ EM  K++ P++V +T+LID L K+ +++  + L KEM E  I P V++ + L+ GL
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+GR+  A   F     K   GY   N  +Y A+I  LC  G   +A  L   M     
Sbjct: 657 CKSGRLEGAKEIFQRLLVK---GY-HLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGC 712

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            PD  T+  ++  L           +L +MI  G++ +
Sbjct: 713 MPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 251/504 (49%), Gaps = 27/504 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N +L+ L+    + +V   +++    G   D+ T  +L++C C    +  A ++
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++ +G  P  +    LI GLC   ++ +A      +   G   N  +Y  L++G CK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +         ++  H+++P+VV +  ++  LCK   L  A + +  M   G+ PN+  
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G C  G+L EA SL +EM+   I+PDV T+N LI  L   G+++ A+ +L  M 
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K  I  +VVTYNSLIDGY     ++ A  V   M + GV PNV T++++IDG CK   +D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM  K+++PD+V +T+LIDGL K+ +++  + L K+M E  I P V++ + L+
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K GR+ NA  FF     K   GY   N   Y  +I  LC      +A  L S M  
Sbjct: 421 DALCKGGRLENAKEFFQRLLVK---GY-HLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476

Query: 502 DNLRPDNCTYTTML---------------------RGLLRAK--RMLDVMMLLADMIKMG 538
               PD  T+ T++                     RGL  A+  R+ +  ++LA M K  
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           I PD V    ++ GY    +LK A
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHA 560



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 261/540 (48%), Gaps = 44/540 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   + TLI    + G  +    + RK+E   V P +   N +++ L K        +
Sbjct: 165 QLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACD 224

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y EM++ G+  +VVTY  L+   C  G + +A +L +EM  K I P V  +  LI  L 
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E KM  A+ +   M +  + P++ TYN+L+DGY  +  V  A   ++ M    + PNV 
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++DGLCK   +  A + F  M    + P+I  Y  LIDG CK  +L  A++LC +M
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  I PDV++Y IL+  LC  G+LE A+   Q++  +G   NV TYN +I+G CK    
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV--------- 396
            +A+ + S+M  KG  P+ +TF ++I    +    D A  +  EM+ + L          
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524

Query: 397 --------------PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
                         PDVV +  L+DG      +K    ++  M +  +TP+V   + +I 
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID 584

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K   +  A++ F E   K       PN V Y ++I ALC +  + +A  L  +M+  
Sbjct: 585 GLCKKKTVDEAMSLFEEMKHKN----MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++PD  +YT +L GL ++ R+                   +  +++V+GY  N  + +A
Sbjct: 641 GIQPDVYSYTILLDGLCKSGRLEGA--------------KEIFQRLLVKGYHLNVQVYTA 686



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 204/430 (47%), Gaps = 10/430 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+  FD M+     P    +  ++  L N        S+F+     G  P+L T N LM+
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  +  A      +L     PN +T   L+ GLC  GE++ A  F   +   G   
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   Y  LI+G CK G       L  ++E   + PDV  YN +I  LC    L  A  L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  NVVTYN+L+ G+C  G +++A S+ ++M  K + P+V TF++LID   K 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G + AA  +   M+   + PDVV + +LIDG      +K    ++  M ++ +TP+V T 
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +++I GL K   +  A++ F E   K       P+ V Y ++I  LC +  + +A  L  
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKN----MIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG----- 552
            M+   ++PD  +YT +L  L +  R+ +       ++  G   +     VM+ G     
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462

Query: 553 -YQENGDLKS 561
            + E  DLKS
Sbjct: 463 LFGEAMDLKS 472



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 175/390 (44%), Gaps = 39/390 (10%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+  +  ML     P    F  ++  L          + F      G  P++   N L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C   ++  A S+ + + K    P+  T N LIKGLC  G+++ A     ++  +G   
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 328 NVVTYNSLIDGYCKEGDMEKAL-----------------------SVC------------ 352
           N V+Y +LI+G CK G+ +                          S+C            
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S+M  KG+ PNVVT+++L+ G C  G++  A  L  EM +K++ PDV  F  LID L K+
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G MK    +   M++A I P V T +SLI G F   ++ NA   F            +PN
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG----VTPN 342

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  +I  LC +  + +A  LF +M+  N+ PD  TYT+++ GL +   +   + L  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            M + GI PD     +++    + G L++A
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENA 432



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 4/202 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P    F+ ++       +    + L+ +       PD+     L++      ++     +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
              +L+    P+  T+++LI GL   G I  AL F     D+        N V Y  +I 
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFH----DQVVAQGFQLNQVSYRTLIN 176

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G+    ++L   +   +++PD   Y T++  L + K + D   L ++MI  GI P
Sbjct: 177 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISP 236

Query: 542 DAVINQVMVRGYQENGDLKSAF 563
           + V    +V G+   G LK AF
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAF 258


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 243/441 (55%), Gaps = 7/441 (1%)

Query: 67  HIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
            + +A+ ++R   K    P+I   N LL+ ++K  K+D V    ++M + G+  D+ T+ 
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           ++I+C C    V  AL++  +M+  G EP  V    L++G C  N++ +A S+   M E 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P++  YNA++D  CK   VN AL+F+ E+    ++PNVVT+  L++GLC  G    A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M K  + PN+  Y+ L+D   K G + EA  +  EM +  I PD+ TY+ LI G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC   +++ A  +   M  +G   +VV+YN+LI+G+CK   +E  + +  +M+++G+  N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT+++LI G  + G++D A   +++M    + PD+  +  L+ GL  +G +++ L +++
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M ++++   + T +++I G+ K G++ +A   F   + K       P+ V Y  ++  L
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKG----LKPDIVTYTTMMSGL 480

Query: 484 CYDGQILKASKLFSDMRSDNL 504
           C  G   +   L++ M+ + L
Sbjct: 481 CTKGLQHEVEALYTKMKQEGL 501



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 220/420 (52%), Gaps = 4/420 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+NLF EM+     P++V +  L+  +    K     S+ + M   G+  +LYT+N +++
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C    V+ AL    +ML    +P+ VT G L++G C+   +  A +    M + G  P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  YN +ID  CK   + +A+    E+ +  I P+V TY  L+ GLC  G+   A  LL
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M K  I  NV+TY++L+D + K G + +A  +  +M    ++P++VT+SSLI+G C  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ID A  ++  MV K   PDVV +  LI+G  K   +++ ++L+++M +  +  +  T 
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G F+ G +  A  FF     + D    SP+   Y  ++  LC +G + KA  +F 
Sbjct: 369 NTLIQGFFQVGDVDKAQEFF----SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM+   +  D  TYTT+++G+ +  ++ D   L   +   G+ PD V    M+ G    G
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 195/389 (50%), Gaps = 41/389 (10%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P      +L+NG  ++ +        ++MV  G   D+V Y  +ID  C    V  AL+ 
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF 212

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F E+  KGI P VV YT L++GLCN  +  +A  + R M +  + PN+ TY+AL+D + K
Sbjct: 213 FKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVK 272

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V  A E + EM+  ++ P++VT+  L++GLC    +  A   F  M   G FP++  
Sbjct: 273 NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332

Query: 262 YNCLIDGHCKA-----------------------------------GNLFEAMSLCSEME 286
           YN LI+G CKA                                   G++ +A    S+M+
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            F +SPD++TYNIL+ GLC  G LE A  + + M K  +  ++VTY ++I G CK G +E
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   ++ KG++P++VT+++++ G C  G       LYT+M  + L+ +  +     
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCL-- 510

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                DG++  +  L K+ML     PS+ 
Sbjct: 511 ----GDGDITISAELIKKMLSCGYAPSLL 535



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 177/324 (54%), Gaps = 4/324 (1%)

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A N F  M K   FP+I  +N L+    K       +SL  +ME   I  D++T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           I+I   C   Q+  A  +L KM K G   + VT  SL++G+C+   +  A+S+  +M E 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P++V ++++ID  CK   ++ A+  + E+  K + P+VV +TAL++GL   G   + 
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL ++M++ KITP+V T S+L+    KNG++  A   F E    +      P+ V Y++
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS----IDPDIVTYSS 300

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC   +I +A+++F  M S    PD  +Y T++ G  +AKR+ D M L   M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           +V + V    +++G+ + GD+  A
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKA 384



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 4/367 (1%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+  + EM+     P++V F  L+  + K+ +     +    M   G+  +++ +N +I+
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C    +  A+S+  +M K    PD  T   L+ G C   ++  A  L+ KM + G   
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++V YN++ID  CK   +  AL    ++  KG+ PNVVT+++L++G C +G  + A  L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M+ + + P+V+ ++AL+D   K+G + E   +++EM+   I P + T SSLI+GL  +
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            RI  A   F    D      C P+ V Y  +I   C   ++    KLF  M    L  +
Sbjct: 309 DRIDEANQMF----DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TY T+++G  +   +       + M   G+ PD     +++ G  +NG L+ A    E
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 568 FLKESRI 574
            +++S +
Sbjct: 425 DMQKSEM 431



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC---NALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  F +   +E+ + ++RK+     +      N L+ G  + G  D   EF+ +M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D+ TY +L+   C  G + KAL +F++M    ++  +V YT +I G+C   K+ 
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           +A  +F S+   G+ P++ TY  +M G C     +     Y +M    L  N
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score = 42.0 bits (97), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 37/188 (19%)

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR---------------ISNALN 455
           +D  + + + L++EM++ +  PS+   + L+  + K  +               I N L 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 456 FF-------------------LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            F                   L K  K   GY  P+ V   +++   C   ++  A  L 
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKL--GY-EPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M     RPD   Y  ++  L + +R+ D +    ++ + GI P+ V    +V G   +
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 557 GDLKSAFR 564
           G    A R
Sbjct: 239 GRWNDAAR 246


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 163/539 (30%), Positives = 273/539 (50%), Gaps = 29/539 (5%)

Query: 55  FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+TLI  + + G +  AL +    RK  +L  I + N L+NG  K+G++D       E+ 
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209

Query: 112 LC---------------------GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
                                   L AD++TY  +I   C Q  + +A  L++EMI  G 
Sbjct: 210 ESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGF 269

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P VV Y+ +++GLC + ++ EA+ + R M++ GV PN   Y  L+D   K      A  
Sbjct: 270 LPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +++   +  ++V    L+DGL K  + + A + F  ++K  + PN   Y  LIDG+C
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYC 389

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G++    SL  EME+  I+P+V TY+ +I G    G L+ A  +++KM  + I+ N  
Sbjct: 390 KVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAY 449

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y  LIDGYCK G  E A  + ++M   G++ N V F  L++   +   +D A  L  ++
Sbjct: 450 VYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDV 509

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + L+ D V +T+L+DG  K G     L + +EM E  I   V T + LI+GL ++G+ 
Sbjct: 510 TSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY 569

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
                +    +   + G  +PN   Y  +I+A C  G++  A +L+++M+S  + P + T
Sbjct: 570 EAKSVY----SGMIEMG-LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSIT 624

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
             T++ GL  A  +   M +L +M  MGI P+ VI++V++    ++G   +  +  E L
Sbjct: 625 CNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQL 683



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 251/525 (47%), Gaps = 35/525 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I  + +   +EEA  +Y ++ +   LP +   ++++NGL K G+     E   EM
Sbjct: 240 TYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM 299

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  + V Y  LID     G   +A     +++ +G+   +V+ T L+ GL   +K 
Sbjct: 300 KKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKP 359

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EAE MFR++ +  ++PN  TY AL+DGYCKV D+ R      EM   ++ PNV+T+  +
Sbjct: 360 KEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSI 419

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G  K G L  A N    M    + PN +VY  LIDG+CKAG    A  L +EM+   +
Sbjct: 420 INGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGL 479

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +   +++L+  L    +++ AE LL+ +   G+L + V Y SL+DG+ K G    AL+
Sbjct: 480 KVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALN 539

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +MTEK +  +VVT++ LI+G  + G  +A   +Y+ M+   L P+   +  +I    
Sbjct: 540 MVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAK-SVYSGMIEMGLAPNQATYNIMIKAYC 598

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE----------- 459
           K G +   L L+ EM   KI PS  T ++L+ GL + G I  A+N   E           
Sbjct: 599 KQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLV 658

Query: 460 ----------KTDKTDGGY----------CSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                     K+ K +                N   Y  +I   C      KA+ +   M
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYM 718

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             D    D  TY  ++RG   +  +   +     M+  G+ P+ V
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIV 763



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/560 (27%), Positives = 257/560 (45%), Gaps = 73/560 (13%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  ++P +   N L+      G    V + Y EM+   +  +V T+ VL+   C  G++
Sbjct: 2   RKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNL 61

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           + AL+L   +    +E   V Y  +I G C    + +A      M +     +  T N L
Sbjct: 62  ILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNIL 118

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQP-----NVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           + G+C++      L  Y E +  NL       +V+ F  L+DG CK GE+  A +    M
Sbjct: 119 VKGFCRIG-----LAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERM 173

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM---------------------EKFE 289
            K G+  +I  YN LI+G CK G   +A SL  E+                     +   
Sbjct: 174 RKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLN 233

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +  D+ TY  +I   C    LE A  L ++M   G L +VVTY+S+++G CK+G + +A 
Sbjct: 234 LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQ 293

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK---------------- 393
            +  +M + GV+PN V +++LID   KAG+   A    +++V++                
Sbjct: 294 ELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 394 -------------------SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
                              +L+P+ + +TALIDG  K G+M+    L +EM E  I P+V
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T SS+I+G  K G +  A+N   +  D+       PN  +YA +I   C  G+   A+ 
Sbjct: 414 ITYSSIINGYTKKGILDEAINVMKKMLDQN----IIPNAYVYAILIDGYCKAGKQEIATD 469

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+++M+   L+ +N  +  ++  L R KRM +   LL D+   G++ D V    ++ G+ 
Sbjct: 470 LYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFF 529

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G   +A    E + E  I
Sbjct: 530 KAGKESAALNMVEEMTEKSI 549



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 246/500 (49%), Gaps = 22/500 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI---KKGK-FDSVWEF 106
           N  V++ LI  + + G  E A  +Y +++ L  ++  N L + L+   K+GK  D   E 
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMK-LSGLKVNNVLFDVLVNNLKRGKRMDEAEEL 505

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +++   GL+ D V Y  L+D     G    ALN+ +EM +K I   VV Y +LI+GL  
Sbjct: 506 LKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLE 565

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  EA+S++  M E G+ PN  TYN ++  YCK  +++ ALE ++EM  H + P+ +T
Sbjct: 566 HGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSIT 624

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+ GL + GE+  A N    M+  G+ PN+ ++  L++   K+G     + +  ++ 
Sbjct: 625 CNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLV 684

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +  +   YN LI   C +   + A  +L+ M ++G +A+ VTYN+LI GYC+   ++
Sbjct: 685 DMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVK 744

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KAL+  +QM  +GV PN+VT++ L+ G   AG +     L+ +M    L PD   +  LI
Sbjct: 745 KALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLI 804

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K GN KE++RLY EM+     P   T + LI    K G++  A     E   +   
Sbjct: 805 SGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRG-- 862

Query: 467 GYCSPNHVLYAAIIQALC-------YDGQILK-----ASKLFSDMRSDNLRPDNCTYTTM 514
               P+   Y  +I   C        D  + K     A  L ++M      P   T   +
Sbjct: 863 --VPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACI 920

Query: 515 LRGLLRAKRMLDVMMLLADM 534
                R  +MLD   LL ++
Sbjct: 921 SSTFARPGKMLDAEKLLKEI 940



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 263/517 (50%), Gaps = 8/517 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI +  + G   EA     ++ V      +  C  L++GL K  K     + +
Sbjct: 307 NHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMF 366

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +    L+ + +TY  LID  C  GD+ +  +L  EM +K I P V+ Y+ +I+G   +
Sbjct: 367 RALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKK 426

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA ++ + M +  ++PN Y Y  L+DGYCK      A + Y+EM    L+ N V F
Sbjct: 427 GILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLF 486

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++ L +   +  A      +   G+  +   Y  L+DG  KAG    A+++  EM +
Sbjct: 487 DVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE 546

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  DV TYN+LI GL   G+ E A+ +   M + G+  N  TYN +I  YCK+G+++ 
Sbjct: 547 KSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDN 605

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL + ++M    + P+ +T ++L+ G  +AG I+ AM +  EM +  + P++V+   L++
Sbjct: 606 ALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLN 665

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             SK G     L++++++++  +  +    ++LI  +F   R++      L+   +   G
Sbjct: 666 ASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI-VVFCRLRMTKKATSVLKYMIR--DG 722

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + + + V Y A+I+  C    + KA   ++ M ++ + P+  TY  +L GLL A  M + 
Sbjct: 723 FVA-DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAER 781

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             L   M + G+ PDA     ++ GY + G+ K + R
Sbjct: 782 DELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIR 818



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 34/436 (7%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR+  +VP L  +N L+  +     V++  + Y EML   + PNV T  VL+   CK+G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A +    +    V  +   YN +I G C+ G + +A    S M K +   D  T NI
Sbjct: 61  LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+KG C +G  +  E ++  +   G   +V+ +N+LIDGYCK G+M  AL +  +M ++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV----------------IK-----SLVPD 398
           +  ++V++++LI+G CK G  D A  L  E+                 IK     +L  D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           ++ +T +I    K   ++E   LY+EM+     P V T SS+++GL K+GR+S A     
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   K  G    PNHV Y  +I +L   G   +A    S +    +  D    TT++ GL
Sbjct: 298 EM--KKMG--VDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG--- 575
            ++ +  +   +   + K+ ++P+++    ++ GY + GD++      + ++E  I    
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 576 ---SSETEGHTTRSFL 588
              SS   G+T +  L
Sbjct: 414 ITYSSIINGYTKKGIL 429


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 199/372 (53%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N ++  L K G+     +    M   G+  D V Y  +I   C  G+V  A  LFDEM  
Sbjct: 316 NNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRR 375

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K I P +V YT +IHG+C   KMVEA  MF  M   G+ P+  TY AL+DGYCK  ++  
Sbjct: 376 KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKE 435

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   +++M+   L PNVVT+  L DGLCK GE+  A      M++ G+ PN++ YN +++
Sbjct: 436 AFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVN 495

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK GN+ + + L  EM+     PD  TY  L+   C +G++  A  LL+ M  + +  
Sbjct: 496 GLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            +VT+N L++G+C  G +E    +   M EKG+ PN  TF+SL+   C   N+ A   +Y
Sbjct: 556 TLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIY 615

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M  + ++PD   +  LI G  K  NMKE   L+KEM+E   + +  T  +LI G +K 
Sbjct: 616 KAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKR 675

Query: 448 GRISNALNFFLE 459
            +   A   F E
Sbjct: 676 KKFVEARKLFEE 687



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 257/487 (52%), Gaps = 5/487 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           +CN +L+ L + GK         +M   G   DVV+YGV++   C  G++ K L L DE+
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
             KG++P   IY  +I  LC   ++VEAE + R MR+ GV P+   Y  ++ G+CK+ +V
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + A + + EM    + P++VT+  ++ G+CK G++  A   F  M   G+ P+   Y  L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+CKAG + EA S+ ++M +  ++P+V TY  L  GLC  G+++ A  LL +M ++G+
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NV TYN++++G CK G++E+ + +  +M   G  P+ +T+++L+D  CK G +  A  
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L   M+ K L P +V F  L++G    G +++  RL + MLE  I P+  T +SL+    
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM---- 599

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   I N +    E           P+   Y  +I+  C    + +A  L  +M      
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR- 564
               TY  ++RG  + K+ ++   L  +M K G+V +  I  + V    E G+ +     
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719

Query: 565 CSEFLKE 571
           C EF+ E
Sbjct: 720 CDEFMTE 726



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/375 (34%), Positives = 200/375 (53%), Gaps = 3/375 (0%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I+   + G + EA   L   RK  V P       +++G  K G   +  + ++EM
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +V D+VTY  +I   C  G +++A  +F+EM+ KG+EP  V YT LI G C   +M
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   M + G+ PN+ TY AL DG CK  +++ A E  HEM    LQPNV T+  +
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK+G +         M   G +P+   Y  L+D +CK G + +A  L   M    +
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P + T+N+L+ G C  G LE  E L++ M ++GI+ N  T+NSL+  YC + +M     
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M ++GV P+  T++ LI G CKA N+  A  L+ EMV K        + ALI G  
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673

Query: 411 KDGNMKETLRLYKEM 425
           K     E  +L++EM
Sbjct: 674 KRKKFVEARKLFEEM 688



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 256/498 (51%), Gaps = 41/498 (8%)

Query: 115 LVADVVTYGVLI--DCC--------CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           L   ++ YGV++  D C        C    +  A+ +F+E  + G+    V   I++H L
Sbjct: 193 LFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCL 252

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   K+ EA ++   M + G  P++ +Y  ++ GYC++ ++++ L+   E+    L+P+ 
Sbjct: 253 CQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDE 312

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             +  ++  LCK GE+  A      M K+GVFP+  VY  +I G CK GN+  A  L  E
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDE 372

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M + +I PD+ TY  +I G+C  G++  A  +  +M  +G+  + VTY +LIDGYCK G+
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           M++A SV +QM +KG+ PNVVT+++L DG CK G ID A  L  EM  K L P+V  +  
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA-------LNFF 457
           +++GL K GN+++T++L +EM  A   P   T ++L+    K G ++ A       LN  
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552

Query: 458 LEKTDKT----DGGYC--------------------SPNHVLYAAIIQALCYDGQILKAS 493
           L+ T  T      G+C                     PN   + ++++  C    +   +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +++  M    + PD+ TY  +++G  +A+ M +   L  +M++ G    A     ++RG+
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672

Query: 554 QENGDLKSAFRCSEFLKE 571
            +      A +  E +++
Sbjct: 673 YKRKKFVEARKLFEEMRK 690



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 236/458 (51%), Gaps = 12/458 (2%)

Query: 128 CCCGQGDVMKALNLFDEMI-----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           C   + DV K+ +LF EM+     D G  P  +++ +    L     ++EA+ +F  +  
Sbjct: 142 CAKPKIDVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKLLR 199

Query: 183 CGVVPNLYTYNALMDGY-CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
            GVV ++ + N  +    C    +  A++ + E     +  N V+  +++  LC++G++R
Sbjct: 200 YGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVR 259

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A N  V M   G FP++  Y  ++ G+C+ G L + + L  E++   + PD + YN +I
Sbjct: 260 EAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNII 319

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC  G++  AE LL+ M K G+  + V Y ++I G+CK G++  A  +  +M  K + 
Sbjct: 320 LLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIV 379

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++VT++S+I G CK+G +  A  ++ EM++K L PD V +TALIDG  K G MKE   +
Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV 439

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + +M++  +TP+V T ++L  GL KNG I  A     E + K       PN   Y  I+ 
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG----LQPNVYTYNTIVN 495

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G I +  KL  +M      PD  TYTT++    +   M     LL  M+   + P
Sbjct: 496 GLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             V   V++ G+  +G L+   R  E++ E  I  + T
Sbjct: 556 TLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 38/399 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++T+I  F ++G++  A  ++   R+ +++P I    ++++G+ K GK     E + EM
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           ++ GL  D VTY  LID  C  G++ +A ++ ++M+ KG+ P VV YT L  GLC   ++
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 171 VEAESMFRSMRECGVVPNLYTYNA-----------------------------------L 195
             A  +   M   G+ PN+YTYN                                    L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           MD YCK+ ++ +A E    ML+  LQP +VTF VLM+G C  G L         M + G+
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN   +N L+  +C   N+     +   M    + PD  TYNILIKG C    ++ A  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L ++M ++G      TY++LI G+ K     +A  +  +M + G+      +   +D   
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNY 708

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + GN +  + L  E + +      VV+     G S + N
Sbjct: 709 EEGNWEITLELCDEFMTELSGTIFVVYICFFIGGSVESN 747


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 162/580 (27%), Positives = 294/580 (50%), Gaps = 47/580 (8%)

Query: 1   IFYVLANAKLYKNARCLIKDVTE-NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLI 59
           + ++L +A+L+  A  +++ + + +   + + + VC  VF+         F   VF  L+
Sbjct: 107 LLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEF---GFCSGVFDMLM 163

Query: 60  IAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            AF+E G  + AL+V+    +I  +P +++C+ LL  L++KG+       ++++V  G+V
Sbjct: 164 KAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIV 223

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY------------------- 157
            DV    ++++  C  G V  A+ + ++M+ +G+EP VV Y                   
Sbjct: 224 PDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERV 283

Query: 158 ----------------TILIHGLCNENKMVEAESMFRSMRECG-VVPNLYTYNALMDGYC 200
                           T+L+ G C + KM EAE + R + E   +V +   Y  L+DGYC
Sbjct: 284 LRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYC 343

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++  +  A+    EML   L+ N+V    L+ G CK+G++  A   FV M  + + P+ +
Sbjct: 344 QMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCY 403

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+DG+C+ G + +A  LC EM    I+P V TYN +IKGL  VG  + A  L   M
Sbjct: 404 SYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLM 463

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  N ++  +++D + K GD ++A+ +  ++  +G   + V F+++I G CK G +
Sbjct: 464 VERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKL 523

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  ++  M    L PD + +  L DG  K+GN++E  ++   M    ++ S+   +SL
Sbjct: 524 MEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSL 583

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLFK  ++++  +  +E   +T G   SPN V Y  +I   C + ++ KA  L+ +M 
Sbjct: 584 IDGLFKIRKLNDVTDLLVEM--QTRG--LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI 639

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
                P+    + ++  L R  R+ +  ++L  M+   I+
Sbjct: 640 ERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDIL 679



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 255/529 (48%), Gaps = 32/529 (6%)

Query: 68  IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL-VADVVTYGVLI 126
           +E  L +  +  V   +  C  L+ G  KKGK D   +   E+    L V D   YGVL+
Sbjct: 280 VERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLV 339

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
           D  C  G +  A+ + DEM+  G++  +VI   LI G C   ++ EAE +F  M +  + 
Sbjct: 340 DGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLK 399

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+ Y+YN L+DGYC+   V++A     EML   + P VVT+  ++ GL  VG    A + 
Sbjct: 400 PDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHL 459

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           +  M + GV PN      ++D   K G+   AM L  E+     +     +N +I GLC 
Sbjct: 460 WHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCK 519

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           +G+L  A  +  +M + G+  + +TY +L DGYCK G++++A  +   M  + +  ++  
Sbjct: 520 MGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEM 579

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++SLIDG  K   ++    L  EM  + L P+VV +  LI G   +  + +   LY EM+
Sbjct: 580 YNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI 639

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNA-------LNF----------------------- 456
           E   TP+V   S ++  L+++ RIS A       L+F                       
Sbjct: 640 ERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQ 699

Query: 457 -FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              +  DK+D      N+++Y   I  LC  G++ +A  + S + S    PDN TY T++
Sbjct: 700 KIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLI 759

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                +  + +   L  +M++ G++P+  I   ++ G  + G++  A R
Sbjct: 760 HACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 238/532 (44%), Gaps = 77/532 (14%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDS 102
           E+   +  V+  L+  + +MG +E+A+ +     ++ +   +  CN L+ G  K G+   
Sbjct: 326 ELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCE 385

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
               +  MV   L  D  +Y  L+D  C +G V KA  L +EM+  GI PTVV Y  +I 
Sbjct: 386 AERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIK 445

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GL +     +A  ++  M E GV PN  +   ++D + K+ D +RA+  + E+L      
Sbjct: 446 GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK 505

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-- 280
           + V F  ++ GLCK+G+L  AG  F  M + G+ P+   Y  L DG+CK GN+ EA    
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIK 565

Query: 281 ---------------------------------LCSEMEKFEISPDVFTYNILIKGLCGV 307
                                            L  EM+   +SP+V TY  LI G C  
Sbjct: 566 GVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDE 625

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA------------LSVCSQM 355
            +L+ A  L  +M + G   NVV  + ++    ++  + +A            L+V ++ 
Sbjct: 626 QKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC 685

Query: 356 TEKGVE-----------------------PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           ++K V+                        N + ++  IDG CK+G +D A  + + ++ 
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           +  +PD   +  LI   S  GN+ E  +L  EMLE  + P++   ++LI+GL K G I  
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           A   F +   K       PN V Y  +I   C  G + KAS+L   M  + +
Sbjct: 806 AQRLFYKLYQKG----LVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 73/454 (16%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  +   G + +A  +  ++    + P +   N ++ GL+  G +D     +  MV
Sbjct: 405 YNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMV 464

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  + ++   ++DC    GD  +A+ L+ E++ +G   + V +  +I GLC   K++
Sbjct: 465 ERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLM 524

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA---------------LEFYH--- 213
           EA ++F  M+E G+ P+  TY  L DGYCK  +V  A               +E Y+   
Sbjct: 525 EAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLI 584

Query: 214 -----------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
                            EM    L PNVVT+G L+ G C   +L  A + +  M + G  
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFT 644

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-------------------------- 290
           PN+ V + ++    +   + EA  +  +M  F+I                          
Sbjct: 645 PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADS 704

Query: 291 --SPDV-------FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
               D+         YNI I GLC  G+L+ A  +L  +   G L +  TY +LI     
Sbjct: 705 LDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSV 764

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G++++A  +  +M EKG+ PN+  +++LI+G CK GNID A  L+ ++  K LVP+ V 
Sbjct: 765 SGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVT 824

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +  LI    + G++ +  RL ++M E  I+  + 
Sbjct: 825 YNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 220/483 (45%), Gaps = 60/483 (12%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRE------------CGVVPNLY-------- 190
            P  + Y+IL+H L +     EA ++ R + +            C  V ++Y        
Sbjct: 98  RPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSG 157

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            ++ LM  + +      AL  + EM      P + +   L+  L + GE R A   F  +
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G+ P++++ + +++ HC+ G +  AM +  +M K  + P+V TYN L+ G  G G  
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 311 EGAEGLLQKMYKEGILANVVT------------------------------------YNS 334
           EG E +L+ M + G+  NVVT                                    Y  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+DGYC+ G ME A+ +  +M   G++ N+V  ++LI G CK G +  A  ++  MV  +
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD   +  L+DG  ++G + +   L +EML   ITP+V T +++I GL   G   +AL
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + +    ++      +PN +    ++      G   +A  L+ ++           + TM
Sbjct: 458 HLWHLMVERG----VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + GL +  ++++   +   M ++G+ PD +  + +  GY +NG+++ AF+    ++   +
Sbjct: 514 ISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAM 573

Query: 575 GSS 577
            +S
Sbjct: 574 SAS 576



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 178/336 (52%), Gaps = 12/336 (3%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           +VF+ +  L +   +   + TL   + + G+++EA  +   +E   +  +I+  N+L++G
Sbjct: 528 AVFDRMKELGLSP-DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  K + V +   EM   GL  +VVTYG LI   C +  + KA +L+ EMI++G  P 
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV+ + ++  L  ++++ EA  +   M +  +   L  +N   D   K  D+    +   
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNKCSDKLVK-NDLTLEAQKIA 702

Query: 214 EMLHH----NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + L      N   N + + + +DGLCK G+L  A +    +   G  P+ F Y  LI   
Sbjct: 703 DSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHAC 762

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
             +GN+ EA  L  EM +  + P++  YN LI GLC +G ++ A+ L  K+Y++G++ N 
Sbjct: 763 SVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNA 822

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
           VTYN LI  YC+ GD++KA  +  +MTE+G+   ++
Sbjct: 823 VTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 252/464 (54%), Gaps = 11/464 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I     LLN + K  KFD V    + + + G+  D+ T  +L++C C       A +
Sbjct: 68  LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASS 127

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +++  G EP +  +T LI+G C  N++ EA SM   M E G+ P++  Y  ++D  C
Sbjct: 128 FLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC 187

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V+ AL  +++M ++ ++P+VV +  L++GLC  G  R A      M K  + P++ 
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LID   K G L +A  L +EM +  I+P++FTY  LI GLC  G+L+ A  +   M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VV Y SLI+G+CK   +E A+ +  +M++KG+  N +T+++LI G    G  
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI---TPSVFTV 437
           + A  ++  MV + + P++  +  L+  L  +G + + L ++++M + +I    P++ T 
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 438 SSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           + L+HGL  NG++  AL  F  ++K D           + Y  IIQ +C  G++  A  L
Sbjct: 428 NVLLHGLCYNGKLEKALMVFGDMQKRDM------DIGIITYTIIIQGMCKAGKVKDALNL 481

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           F  + S  ++P+  TYTTM+ GL R   ML+  +L   M + G+
Sbjct: 482 FCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 232/430 (53%), Gaps = 7/430 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL+LF  M++    P+++ +T L++ +    K     ++ + ++  GV  +LYT N LM
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           + +C+ +    A  F  +++    +P++ TF  L++G C    +  A +    M + G+ 
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIK 173

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++ +Y  +ID  CK G++  A+SL ++ME + I PDV  Y  L+ GLC  G+   A+ L
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M K  I  +V+T+N+LID + KEG +  A  + ++M +  + PN+ T++SLI+G C 
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCM 293

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A  ++  M  K   PDVV +T+LI+G  K   +++ ++++ EM +  +T +  T
Sbjct: 294 EGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G    G+ + A   F     +       PN   Y  ++  LCY+G++ KA  +F
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRG----VPPNIRTYNVLLHCLCYNGKVNKALMIF 409

Query: 497 SDMRS---DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            DM+    D + P+  TY  +L GL    ++   +M+  DM K  +    +   ++++G 
Sbjct: 410 EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGM 469

Query: 554 QENGDLKSAF 563
            + G +K A 
Sbjct: 470 CKAGKVKDAL 479



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 213/393 (54%), Gaps = 5/393 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+   P I    +L+NG     + +       +MV  G+  DVV Y  +ID  C  G V 
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL+LF++M + GI P VV+YT L++GLCN  +  +A+ + R M +  + P++ T+NAL+
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D + K   +  A E Y+EM+  ++ PN+ T+  L++GLC  G L  A   F  M   G F
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF 313

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  Y  LI+G CK   + +AM +  EM +  ++ +  TY  LI+G   VG+   A+ +
Sbjct: 314 PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEV 373

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK---GVEPNVVTFSSLIDG 373
              M   G+  N+ TYN L+   C  G + KAL +   M ++   GV PN+ T++ L+ G
Sbjct: 374 FGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHG 433

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ++ A+ ++ +M  + +   ++ +T +I G+ K G +K+ L L+  +    + P+
Sbjct: 434 LCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPN 493

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           V T +++I GLF+ G +  A   F  +  K DG
Sbjct: 494 VVTYTTMISGLFREGLMLEAHVLF--RKMKEDG 524



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 244/485 (50%), Gaps = 2/485 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L NGL    +F+   + +  MV    +  ++ +  L++           +NL   +   G
Sbjct: 43  LRNGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG 101

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +   +    +L++  C  ++   A S    + + G  P+++T+ +L++G+C    +  A+
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              ++M+   ++P+VV +  ++D LCK G +  A + F  M  +G+ P++ +Y  L++G 
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C +G   +A  L   M K +I PDV T+N LI      G+L  A+ L  +M +  I  N+
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TY SLI+G C EG +++A  +   M  KG  P+VV ++SLI+G CK   ++ AM ++ E
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K L  + + +T LI G    G       ++  M+   + P++ T + L+H L  NG+
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           ++ AL  F E   K +     PN   Y  ++  LCY+G++ KA  +F DM+  ++     
Sbjct: 402 VNKALMIF-EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGII 460

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           TYT +++G+ +A ++ D + L   +   G+ P+ V    M+ G    G +  A      +
Sbjct: 461 TYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM 520

Query: 570 KESRI 574
           KE  +
Sbjct: 521 KEDGV 525



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 191/343 (55%), Gaps = 6/343 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++T+I +  + GH++ AL ++ ++E   + P +    +L+NGL   G++         M
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +  DV+T+  LID    +G ++ A  L++EMI   I P +  YT LI+GLC E ++
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  MF  M   G  P++  Y +L++G+CK   V  A++ ++EM    L  N +T+  L
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G   VG+   A   F HM   GV PNI  YN L+   C  G + +A+ +  +M+K EI
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417

Query: 291 S---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P++ TYN+L+ GLC  G+LE A  +   M K  +   ++TY  +I G CK G ++ 
Sbjct: 418 DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKD 477

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           AL++   +  KGV+PNVVT++++I G  + G +  A  L+ +M
Sbjct: 478 ALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM 520



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 8/248 (3%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEF 106
           P++F+  +LI      G ++EA  ++  +E     P + A  +L+NG  K  K +   + 
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   GL  + +TY  LI      G    A  +F  M+ +G+ P +  Y +L+H LC 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 167 ENKMVEAESMFRSMREC---GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             K+ +A  +F  M++    GV PN+ TYN L+ G C    + +AL  + +M   ++   
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++T+ +++ G+CK G+++ A N F  +   GV PN+  Y  +I G  + G + EA  L  
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518

Query: 284 EMEKFEIS 291
           +M++  +S
Sbjct: 519 KMKEDGVS 526



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 8/162 (4%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE------VLPA 83
           KP+ V   VF  + S  +P  N   ++ L+      G + +AL ++  ++      V P 
Sbjct: 366 KPN-VAQEVFGHMVSRGVPP-NIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           I+  N LL+GL   GK +     + +M    +   ++TY ++I   C  G V  ALNLF 
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFC 483

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
            +  KG++P VV YT +I GL  E  M+EA  +FR M+E GV
Sbjct: 484 SLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 233/449 (51%), Gaps = 8/449 (1%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           + L   K+   A+ L++ V      SRK  +   SVF ++        +  VFS L+ A+
Sbjct: 111 HFLCTHKMLSEAQSLLQFVV-----SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAY 165

Query: 63  SEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           ++ G+  +A+  +R   K  +     +C  L + L+K       W FYEE++ CG   DV
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
             + VL+   C +  + +A  LF E+  +G+ PTVV +  LI+G C    + +   + R 
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M E  V P+++TY+ L++G CK   ++ A + + EM    L PN VTF  L++G C  G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                  +  M + GV P++  YN LI+G CK G+L EA  L  EM +  + PD FTY +
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G LE A  + ++M KEGI  + V + +LI G+C+EG + +A     +M E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           ++P+  T++ +I G CK G++     L  EM     VP VV +  L++GL K G MK   
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            L   ML   + P   T + L+ G  K+G
Sbjct: 526 MLLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 244/464 (52%), Gaps = 13/464 (2%)

Query: 138 ALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           A ++F  +++ +G   + +++++L++   +     +A   FR +R+  +    ++   L 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D   K+   + A  FY E+L     P+V  F VLM  LCK  ++  A   F  + K G+ 
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLR 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P +  +N LI+G+CK+GNL +   L   M +  + PDVFTY++LI GLC  GQL+ A  L
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M   G++ N VT+ +LI+G+C  G  +  + +  QM  KGV+P+V+T+++LI+G CK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G++  A  L  EM  + L PD   +T LIDG  K+G+++  L + KEM++  I      
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G  + G++  A     E  +        P+   Y  +I   C  G +    KL 
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLE----AGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M+ D   P   TY  +L GL +  +M +  MLL  M+ +G+VPD +   +++ G+ ++
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKH 553

Query: 557 GDLKSAFRCSEFLK-ESRIGSSETEGHTTRSFLGHLKPTVYKEQ 599
           G+ +      +F K +S  G  +  G  T S +G L+ T  + Q
Sbjct: 554 GNRE------DFDKLQSEKGLVQDYGSYT-SLIGDLRKTCKERQ 590



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 179/327 (54%), Gaps = 8/327 (2%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
             P+V  F+TLI  + + G++++   + R +    V P +   + L+NGL K+G+ D   
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + EM   GLV + VT+  LI+  C  G     + ++ +M+ KG++P V+ Y  LI+GL
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + EA+ +   M + G+ P+ +TY  L+DG CK  D+  ALE   EM+   ++ + 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V F  L+ G C+ G++  A      M + G+ P+   Y  +I G CK G++     L  E
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+     P V TYN+L+ GLC  GQ++ A  LL  M   G++ + +TYN L++G+CK G+
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLI 371
            E    +    +EKG+  +  +++SLI
Sbjct: 556 REDFDKL---QSEKGLVQDYGSYTSLI 579



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 161/339 (47%), Gaps = 4/339 (1%)

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G+  A+  F   +   G   +  V++ L++ +  +G   +A+     + K  +     
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +   L   L  +     A    +++   G   +V  +N L+   CKE  + +A  +  ++
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++G+ P VV+F++LI+G CK+GN+D    L   M+   + PDV  ++ LI+GL K+G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +  +L+ EM +  + P+  T ++LI+G    GR    +  + +   K       P+ + 
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG----VKPDVIT 367

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I  LC  G + +A KL  +M    L+PD  TYT ++ G  +   +   + +  +M+
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           K GI  D V    ++ G+   G +  A R    + E+ I
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/452 (33%), Positives = 228/452 (50%), Gaps = 12/452 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   + VT+  L++    QG       L + M  +GI+P VV Y  L+ GLC   +  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 174 ESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E + R M  R     P+L TY+ L+ GYCK   V  + E   E++   L+P+ + +  +M
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LCK   L  A      M + G  P +  +N LI G C+  NL  A SL   M    + 
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV TYN L+ GLC  G+L+ AE LL++M   G   +VV Y+S + G CK G +  A  V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             QM +   +PNVVT+++++DG CK+G ID A+ +  +M        +VV ++ ++DGL 
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G  +E   + + M  A   P V T SSL++GL K G+I  A+    E   +     C 
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG----CK 360

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC-----TYTTMLRGLLRAKRML 525
           PN V Y +++  LC  G++ +A ++  +M S     D+C     TY  ++ GL +A R+ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D +     M   G  PD V    +V G   +G
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/444 (34%), Positives = 228/444 (51%), Gaps = 4/444 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NAL+NG  K+G+        E M   G+  +VV+Y  L++  C      +A  L  +MI 
Sbjct: 14  NALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMIS 73

Query: 148 KG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +G    P +V Y+ L+ G C   K+ E+  + + +   G+ P+   Y  +M   CK A +
Sbjct: 74  RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARL 133

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             ALE   EM+     P ++TF  L+ G C+   L  A +    MA  GV  ++  YN L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTL 193

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           +DG CKAG L EA  L   M+    +PDV  Y+  + GLC  G++  A  +L++M     
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDH 253

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
             NVVTYN+++DG CK G ++ AL +  QM +  G   NVV +S+++DG CK G    A 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +   M      PDVV +++L++GL K G ++E +   +EM      P+  T  SL+HGL
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373

Query: 445 FKNGRISNALNFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
              GR++ A     E  +    G +C P+   Y A+I  LC  G+I  A K F  MRS  
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDV 527
             PD  +Y+T++ GL R+ R L  
Sbjct: 434 CDPDGVSYSTIVEGLARSGRALQA 457



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 207/449 (46%), Gaps = 46/449 (10%)

Query: 51  NPSVFSTLIIAFSEMGH---IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ L+  FS+ G     E  L       + P + + N LL GL K  ++    E  
Sbjct: 9   NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68

Query: 108 EEMVLCG--LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT------- 158
            +M+  G     D+VTY  L+   C  G V ++  L  E+I +G+ P  ++YT       
Sbjct: 69  RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC 128

Query: 159 ----------------------------ILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
                                        LI G C E  +  A+S+ ++M   GV  ++ 
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVV 188

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN LMDG CK   +  A +    M      P+VV +   + GLCK G++  A      M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQ 309
                 PN+  YN ++DG CK+G +  A+ +  +M   +    +V  Y+ ++ GLC +G+
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  +++ M + G   +VVTY+SL++G CK G +E+A+    +M  +G +PN VT+ S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLV-----PDVVVFTALIDGLSKDGNMKETLRLYKE 424
           L+ G C  G +  A  +  EM           P V  + ALI GL K G + + L+ ++ 
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           M      P   + S+++ GL ++GR   A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 202/387 (52%), Gaps = 5/387 (1%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  PN  T+NAL++G+ K             M    +QPNVV++  L++GLCK+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 240 LRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
              A      M   G    P++  Y+ L+ G+CKAG + E+  L  E+    + PD   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             ++  LC   +L  A  LL++M + G    ++T+N+LI G C+E ++E A S+   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            GV+ +VVT+++L+DG CKAG +  A  L   M      PDVV +++ + GL K G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             ++ ++M ++   P+V T ++++ GL K+G+I  AL   +E+   +DG  C  N V Y+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEM-MEQMASSDG--CGLNVVGYS 297

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++  LC  G+  +A  +   M     RPD  TY++++ GL +A ++ + +  + +M   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G  P+AV    +V G    G L  A R
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAER 384



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 6/290 (2%)

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++    P+  T+N L+ G    G+    E LL+ M   GI  NVV+YN L++G CK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 345 MEKALSVCSQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +A  +   M  +G    P++VT+S+L+ G CKAG ++ +  L  E++ + L PD +++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T ++  L K   + E L L +EM+ A   P++ T ++LI G  +   +  A +    +T 
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL--QTM 178

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
              G     + V Y  ++  LC  G++ +A +L   M++    PD   Y++ + GL ++ 
Sbjct: 179 AASG--VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           ++L+   +L  M      P+ V    ++ G  ++G + +A    E +  S
Sbjct: 237 KVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 267/538 (49%), Gaps = 14/538 (2%)

Query: 42  LNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLI 95
           L +++     P+   FS LI+A+ E G ++ AL ++  +      LP + A N+LLNGL+
Sbjct: 114 LENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLV 173

Query: 96  KKGKFDSVWEFYEEMVLC----GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           K GK D   + Y++M+      G V D  T  +++   C  G + +   L  +   KG  
Sbjct: 174 KSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCV 233

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV Y ++I G C +  +  A    + ++  GV+P + TY AL++G+CK  +     + 
Sbjct: 234 PHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 293

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             EM    L  NV  F  ++D   K G +  A      MA+ G  P+I  YN +I+  CK
Sbjct: 294 LTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCK 353

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA     + ++  + P+ F+Y  L+   C  G    A G+L ++ + G   ++V+
Sbjct: 354 GGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVS 413

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y + I G    G+++ AL V  +M EKGV P+   ++ L+ G CK G   A   L +EM+
Sbjct: 414 YGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEML 473

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +++ PDV VF  L+DG  ++G + E ++++K ++   + P +   +++I G  K G+++
Sbjct: 474 DRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 533

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +AL+      +K    + +P+   Y+ +I        +  A K+F  M     +P+  TY
Sbjct: 534 DALSCL----NKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 589

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           T+++ G  +   M+    +   M    +VP+ V    +V G+ + G  + A    E +
Sbjct: 590 TSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELM 647



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 256/526 (48%), Gaps = 24/526 (4%)

Query: 54  VFSTLII-AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           VF  +II  + + G ++ A    ++++   VLP ++   AL+NG  K G+F++V +   E
Sbjct: 237 VFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 296

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL  +V  +  +ID     G V KA      M + G  P +  Y  +I+  C   +
Sbjct: 297 MAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGR 356

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA+      +E G++PN ++Y  LM  YCK  D  +A      +     +P++V++G 
Sbjct: 357 IKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGA 416

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC-SEMEKF 288
            + G+   GE+  A      M + GVFP+  +YN L+ G CK G  F AM L  SEM   
Sbjct: 417 FIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGR-FPAMKLLLSEMLDR 475

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + PDV+ +  L+ G    G+L+ A  + + + ++G+   +V YN++I G+CK G M  A
Sbjct: 476 NVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 535

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           LS  ++M      P+  T+S++IDG  K  ++ +A+ ++ +M+     P+V+ +T+LI+G
Sbjct: 536 LSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLING 595

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K  +M    ++++ M    + P+V T ++L+ G FK G+   A + F  +    +G  
Sbjct: 596 FCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIF--ELMLMNG-- 651

Query: 469 CSPNHVLYAAIIQALCYDGQ--ILKASK------------LFSDMRSDNLRPDNCTYTTM 514
           C PN   +  +I  L       +L   K             F+ M S+        Y ++
Sbjct: 652 CPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSV 711

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  L +   +    +LL  M+  G + D+V    M+ G    G  K
Sbjct: 712 IVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSK 757



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 206/435 (47%), Gaps = 9/435 (2%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC-GVVPNLYTYNALMDGY 199
           + + M  + ++PT   ++ LI        +  A  +F ++RE    +P +   N+L++G 
Sbjct: 113 VLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGL 172

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVV----TFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            K   V+ AL+ Y +ML  +     V    T  +++ GLC +G++             G 
Sbjct: 173 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGC 232

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P++  YN +IDG+CK G+L  A     E++   + P V TY  LI G C  G+ E  + 
Sbjct: 233 VPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQ 292

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL +M   G+  NV  +N++ID   K G + KA     +M E G  P++ T++++I+  C
Sbjct: 293 LLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSC 352

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G I  A     +   + L+P+   +T L+    K G+  +   +   + E    P + 
Sbjct: 353 KGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLV 412

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           +  + IHG+  +G I  AL    +  +K       P+  +Y  ++  LC +G+      L
Sbjct: 413 SYGAFIHGVVVHGEIDVALMVREKMMEKG----VFPDAQIYNVLMSGLCKNGRFPAMKLL 468

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S+M   N++PD   + T++ G +R   + + + +   +I+ G+ P  V    M++G+ +
Sbjct: 469 LSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 528

Query: 556 NGDLKSAFRCSEFLK 570
            G +  A  C   +K
Sbjct: 529 FGKMTDALSCLNKMK 543



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 187/454 (41%), Gaps = 87/454 (19%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  VF+ +I A  + G + +A    R++  +   P I   N ++N   K G+     EF 
Sbjct: 305 NVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFL 364

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+    GL+ +  +Y  L+   C QGD +KA  +   + + G +P +V Y   IHG+   
Sbjct: 365 EKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVH 424

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +   M E GV P+   YN LM G CK            EML  N+QP+V  F
Sbjct: 425 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVF 484

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS------- 280
             LMDG  + GEL  A   F  + + GV P I  YN +I G CK G + +A+S       
Sbjct: 485 ATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKN 544

Query: 281 ----------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
                                       +  +M K +  P+V TY  LI G C    +  
Sbjct: 545 VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIR 604

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           AE + + M    ++ NVVTY +L+ G+ K G  EKA S+   M   G  PN  TF  LI+
Sbjct: 605 AEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLIN 664

Query: 373 GQ-------------------------------------------------CKAGNIDAA 383
           G                                                  CK G +D A
Sbjct: 665 GLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTA 724

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             L T+M+ K  + D V FTA++ GL   G  KE
Sbjct: 725 QLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 17/322 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+TL+  F   G ++EA+ +++ I    V P I   NA++ G  K GK         +M
Sbjct: 483 VFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM 542

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  D  TY  +ID    Q D+  AL +F +M+    +P V+ YT LI+G C +  M
Sbjct: 543 KNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADM 602

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           + AE +FR M+   +VPN+ TY  L+ G+ K     +A   +  ML +   PN  TF  L
Sbjct: 603 IRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYL 662

Query: 231 MDGLCKVG--------------ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           ++GL                  E     +FF  M   G    I  YN +I   CK G + 
Sbjct: 663 INGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVD 722

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L ++M       D   +  ++ GLC  G+ +    ++     +  L   V Y+  +
Sbjct: 723 TAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTL 782

Query: 337 DGYCKEGDMEKALSVCSQMTEK 358
           D Y  +G + +A  +   + E+
Sbjct: 783 DKYLYQGRLSEASVILQTLIEE 804



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 166/388 (42%), Gaps = 25/388 (6%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV---------HMA 251
           +V D   AL+F+          +   F   +DG+     L+   +F V         +M 
Sbjct: 66  RVHDAELALKFFD-------WASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMK 118

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQL 310
              + P    ++ LI  + ++G+L  A+ L   + E     P V   N L+ GL   G++
Sbjct: 119 AQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKV 178

Query: 311 EGAEGLLQKMYKE----GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           + A  L  KM +     G + +  T + ++ G C  G +E+   +      KG  P+VV 
Sbjct: 179 DVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVF 238

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ +IDG CK G++  A     E+ +K ++P V  + ALI+G  K G  +   +L  EM 
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              +  +V   +++I   FK G ++ A     E   +     C P+   Y  +I   C  
Sbjct: 299 ARGLNMNVKVFNNVIDAEFKYGLVTKAA----ETMRRMAEMGCGPDITTYNTMINFSCKG 354

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G+I +A +     +   L P+  +YT ++    +    +    +L  + ++G  PD V  
Sbjct: 355 GRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSY 414

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRI 574
              + G   +G++  A    E + E  +
Sbjct: 415 GAFIHGVVVHGEIDVALMVREKMMEKGV 442


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 268/543 (49%), Gaps = 46/543 (8%)

Query: 10  LYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIE 69
           LY +A+ L+  V    ++S+       S+ + +   E  +    ++  +I A+ +   ++
Sbjct: 54  LYSHAQSLLLQVISGKIQSQ--FFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLD 111

Query: 70  EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            ++  + ++     +P     N LL  ++    F+  W F+ E  +  +  DV ++G++I
Sbjct: 112 SSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKI-KVDLDVYSFGIVI 170

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             CC  G++ K+ +L  E                                   +RE G  
Sbjct: 171 KGCCEAGEIEKSFDLLVE-----------------------------------LREFGFS 195

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           PN+  Y  L+DG CK  ++ +A + + EM    L  N  T+ VL+ GL K G  +     
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           +  M + GVFPN++ YNC+++ HCK G   +A  L  EM +  +S ++ TYN LI GLC 
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
             +   A  ++ +M  +GI  N++TYN+LIDG+C  G + KALS+C  +  +G+ P++VT
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ L+ G CK G+   A  +  EM  + + P  + +T LID  ++  NM++ ++L   M 
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPME 435

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E  +TP V T S LIHG    G+++ A   F     K       PN V+Y  ++   C +
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK----LEPNKVIYNTMVLGYCKE 491

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP-DAVI 545
           G   +A +LF +M    L P+  +Y  M+  L + ++  +   L+  MI  GI P D+++
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551

Query: 546 NQV 548
           N +
Sbjct: 552 NLI 554



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 208/424 (49%), Gaps = 5/424 (1%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           E    +Y ++I+       +  + S F  M + G VP    +N L+      +  N+   
Sbjct: 91  ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F++E     +  +V +FG+++ G C+ GE+  + +  V + +FG  PN+ +Y  LIDG C
Sbjct: 151 FFNES-KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G + +A  L  EM KF +  + +TY +LI GL   G  +    + +KM ++G+  N+ 
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN +++ +CK+G  + A  +  +M E+GV  N+VT+++LI G C+    + A  +  +M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               + P+++ +  LIDG    G + + L L +++    ++PS+ T + L+ G  K G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           S A     E  ++       P+ + Y  +I        + KA +L S M    L PD  T
Sbjct: 390 SGAGKVVKEMEERG----IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT 445

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           Y+ ++ G     +M +   L   M+   + P+ VI   MV GY + G    A R    ++
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREME 505

Query: 571 ESRI 574
           E  +
Sbjct: 506 EKEL 509



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 163/318 (51%), Gaps = 5/318 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y  +I+ + ++ +L  ++S  +EM      P    +N L+  + G            + 
Sbjct: 96  LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  +  +V ++  +I G C+ G++EK+  +  ++ E G  PNVV +++LIDG CK G I
Sbjct: 156 -KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  L+ EM    LV +   +T LI GL K+G  K+   +Y++M E  + P+++T + +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++   K+GR  +A   F E  ++  G  C  N V Y  +I  LC + +  +A+K+   M+
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRER--GVSC--NIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           SD + P+  TY T++ G     ++   + L  D+   G+ P  V   ++V G+ + GD  
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 561 SAFRCSEFLKESRIGSSE 578
            A +  + ++E  I  S+
Sbjct: 391 GAGKVVKEMEERGIKPSK 408


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 266/549 (48%), Gaps = 11/549 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  +EA  +  + +    +P++ A N +L  L KKG+       +EEM
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  ++ TY VLID  C  G+V  A  + D M + G+ P V+   I+I  LC   K+
Sbjct: 400 KK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+F  M      P+  T+ +L+DG  K   V+ A   Y +ML  +  PN V +  L
Sbjct: 459 DEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSL 518

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K G        F  M   G  P++ + N  +D   KAG   +  +L  E++    
Sbjct: 519 IKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGF 578

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV +Y+ILI GL   G       L   M ++G + +   YN+ IDG+CK G + KA  
Sbjct: 579 IPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQ 638

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG +P VVT+ S+IDG  K   +D A  L+ E     L  +VV++++LIDG  
Sbjct: 639 LLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFG 698

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +E+++  +TP+V+T + L+  L K   I+ AL  F +      G   +
Sbjct: 699 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCF-QNMKNLKG---T 754

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PNH+ Y+ +I  LC   +  KA   + +M+   L+P+  TYTTM+ GL +A  + +   L
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
                  G VPD+     ++ G   +   + A    +  +E+R+        T  + L  
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYS---RRAMEAYKIFEETRMKGCNIHTKTCIALLDA 871

Query: 591 LKPTVYKEQ 599
           L+     EQ
Sbjct: 872 LQKDECLEQ 880



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 207/405 (51%), Gaps = 5/405 (1%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---E 79
           + L K++K    C S+F  +N  +I   +   F +LI    + G +++A  +Y ++   +
Sbjct: 450 DRLCKAKKLDEAC-SIFEGMNH-KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            +P      +L+    K G+ +   + ++EM+  G   D+      +DC    G+  K  
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF+E+  +G  P V+ Y+ILIHGL       E   +F +M+E G V + + YN  +DG+
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   VN+A +   EM     QP VVT+G ++DGL K+  L  A   F      G+  N+
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y+ LIDG  K G + EA  +  E+ +  ++P+V+T+N L+  L    ++  A    Q 
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M       N +TY+ LI+G C+     KA     +M ++G++PN +T++++I G  KAGN
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           I  A  L+        VPD   + A+I+GLS      E  ++++E
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 236/532 (44%), Gaps = 38/532 (7%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W  RK +     +A ++LL  + K  KFD   +   EM + G      T   LI  C   
Sbjct: 117 WTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKS 176

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
             + +  +L   M      P    YT LI  L +  +     ++F  M+E G   +++ +
Sbjct: 177 NKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLF 236

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++  + +   ++ AL    EM  + L  ++V + V +D   K G++  A  FF  +  
Sbjct: 237 TTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKS 296

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ P+   Y  +I   CK   L EA+ +  +ME+    P  + YN +I G    G+ + 
Sbjct: 297 HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDE 356

Query: 313 AEGLLQKMYKEGILANVV----------------------------------TYNSLIDG 338
           A  LL++    G + +V+                                  TYN LID 
Sbjct: 357 AYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDM 416

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G++E A  V   M E G+ PNV+T + +ID  CKA  +D A  ++  M  K   PD
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            V F +LIDGL K G + +  RLY++ML++   P+    +SLI   FK GR  +    F 
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   +     CSP+  L  A +  +   G+  K   LF +++S    PD  +Y+ ++ GL
Sbjct: 537 EMIHRG----CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++A    +   L   M + G V D       + G+ ++G +  A++  E +K
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 159/316 (50%), Gaps = 11/316 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVW 104
           F P V  +S LI    + G   E   ++  ++    +    A N  ++G  K GK +  +
Sbjct: 578 FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAY 637

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  EEM   G    VVTYG +ID       + +A  LF+E    G+E  VVIY+ LI G 
Sbjct: 638 QLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGF 697

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++ EA  +   + + G+ PN+YT+N L+D   K  ++N AL  +  M +    PN 
Sbjct: 698 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNH 757

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+ +L++GLC+V +   A  F+  M K G+ PN   Y  +I G  KAGN+ EA SL   
Sbjct: 758 ITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL--- 814

Query: 285 MEKFEIS---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            E+F+ +   PD  +YN +I+GL    +   A  + ++   +G   +  T  +L+D   K
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874

Query: 342 EGDMEKALSVCSQMTE 357
           +  +E+A  V + + E
Sbjct: 875 DECLEQAAIVGAVLRE 890


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 241/454 (53%), Gaps = 10/454 (2%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK---GIEPTVVIYTILIHGLCNENKMVE 172
           V D V+Y  ++   C QG +  AL L   M  +      P  + YT L+  LC + +  +
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + RSM++CGV P++ TY  L+ G C  ADV+ A+E  +EM    ++PNVV +  L+ 
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK G   + G  F  M+  G+ P++ +Y  LID  C+ G + +A  +   M +  + P
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TYN+LI  +C  G +  A  L + M ++G+  +VVTYN+LI G     +M++A+++ 
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 353 SQMT--EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +M   E  V P+++TF+S+I G CK G +  A+ +   M       ++V F  LI GL 
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +K+ + L  EM  + + P  FT S LI+G  K  ++  A ++  E   +       
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG----ME 408

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P  V Y  +++A+C  G + +A  LF++M   N + D   Y+TM+ G  ++         
Sbjct: 409 PEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEF 467

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L DMI  G++PDAV   + +  + ++GDL +A R
Sbjct: 468 LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAER 501



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 239/481 (49%), Gaps = 16/481 (3%)

Query: 47  IPKFNPSV-FSTLIIAFSEMGHIEEALWVYR------KIEVLPAIQACNALLNGLIKKGK 99
           +P    +V ++T++ A    G ++ AL++ R      ++   P   +   L+  L    +
Sbjct: 50  LPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRR 109

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
                     M  CG+  DVVTYG LI   C   DV  A+ L +EM + GIEP VV+Y+ 
Sbjct: 110 AAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           L+HG C   +      +F  M   G+ P++  Y AL+D  C+   V +A      M    
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L+PNVVT+ VL++ +CK G +R A +   +M++ GV P++  YN LI G      + EAM
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289

Query: 280 SLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           +L  EM + E  + PD+ T+N +I GLC +G +  A  +   M + G   N+V +N LI 
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIG 349

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G  +   ++KA+ +  +M   G++P+  T+S LI+G CK   ++ A    +EM  + + P
Sbjct: 350 GLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEM-LEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           + V +  L+  +   G M +   L+ EM    K+  + +  S++IHG FK+G    A  F
Sbjct: 410 EPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAY--STMIHGAFKSGEKKIAEEF 467

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D  D G   P+ V Y+  I      G +  A ++   M +    PD   + ++++
Sbjct: 468 L---KDMIDEGLI-PDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQ 523

Query: 517 G 517
           G
Sbjct: 524 G 524



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 238/478 (49%), Gaps = 46/478 (9%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L S++     P V  + TLI    +   ++ A+ +  ++    + P +   + LL+G  K
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+++SV + +EEM   G+  DVV Y  LID  C  G V KA  + D M ++G+EP VV 
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +LI+ +C E  + EA  + ++M E GV P++ TYN L+ G   V +++ A+    EM+
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296

Query: 217 H--HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
                ++P+++TF  ++ GLCK+G +R A      MA+ G   N+  +N LI G  +   
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +AM L  EM    + PD FTY+ILI G C + Q+E AE  L +M  +G+    V Y  
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416

Query: 335 LIDGYCKEGDMEKALSVCSQM----------------------------------TEKGV 360
           L+   C +G M +A  + ++M                                   ++G+
Sbjct: 417 LLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGL 476

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ VT+S  I+   K+G++ AA  +  +M     VPDV VF +LI G    G+ ++ L 
Sbjct: 477 IPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILE 536

Query: 421 LYKEMLEAKITPSVFTVSSLIHGL---FKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           L +EM    +      +S+++  L    +  ++  +L  F   T+ + G   SP+ V+
Sbjct: 537 LTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGF--DTEISKGDVISPHDVM 592



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 96/212 (45%), Gaps = 7/212 (3%)

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV---PDVVVFTALIDGLSKDGNMKETL 419
           + V++++++   C+ G +DAA+ L   M  +  +   P+ + +T L+  L  D    + +
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L + M +  + P V T  +LI GL     +  A+    E  +        PN V+Y+ +
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESG----IEPNVVVYSCL 170

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +   C  G+     K+F +M    + PD   YT ++  L R  ++     ++  M + G+
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            P+ V   V++    + G ++ A    + + E
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSE 262


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 234/444 (52%), Gaps = 4/444 (0%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
            ++Y  L++     G        +++M+  G  P    Y  L+  LC   +  EA S+FR
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  PN+++Y+ L+ G C+   V+ A E  +EM+    QPNVVT+G L+ GLCK+G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L+ A + F  M   G  P+  VYN LIDG  K G++ EA  L  EM +    P VFTYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ G    G+    + L + M ++G + N+ T+N+L+DG+CK GDM +A  +  +M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+VV++++LI G C  G    A  L  EM+   + PD+V +  LIDG SK G +   
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           ++L+ E+ ++ + P  F+ S++I  L + G++  A   F    D    G  +P+  +   
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF---KDMIANG-SAPDAAVVIP 372

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC   ++ ++ +LF  M      P    Y  ++  L +AKR  DV  +  ++ + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
             PD  I++V++   + + D  +A
Sbjct: 433 FSPDVEISKVILETLRRSDDKDAA 456



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 212/403 (52%), Gaps = 4/403 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P       LL  L +  +F+     +  M   G   +V +Y +LI   C    V +A  
Sbjct: 49  VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAE 108

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L +EMID G +P VV Y  L+ GLC   K+ EA  +F  M   G  P+   YN L+DG+ 
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  D+  A   + EML     P V T+  L+ G  + GE     + F  M + G  PNIF
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N L+DG CK G++ EA  L  EM      PDV +YN LI+G+C  G+   A+ LL++M
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  ++V+YN LIDGY K G ++ A+ +  ++ + G+EP+  ++S++ID  C+AG +
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            AA  ++ +M+     PD  V   L+ GL +   + E+  L++ M++ +  P +   + L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           ++ L K  R  +    F E T++   G+ SP+  +   I++ L
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTER---GF-SPDVEISKVILETL 447



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 213/437 (48%), Gaps = 6/437 (1%)

Query: 2   FYVLANAKLYKNARCLIKD-VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           F+  A ++++ N   L  + + E L KS +  HV  +  + L +  +P  N   +  L+ 
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVP--NTYTYGYLLR 60

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           +  +    EEA  V+R +      P + + + L+ GL +  K D   E   EM+  G   
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +VVTYG L+   C  G + +A++LF  M+ +G  P  V+Y +LI G   +  M EA  +F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M E G +P ++TYN+L+ G+ +  +  R    + +ML     PN+ TF  L+DG CK+
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A   F+ M   G  P++  YN LI G C  G   EA  L  EM +  + PD+ +Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           NILI G    G L+ A  L  ++ K G+  +  +Y+++ID  C+ G +  A  V   M  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+      L+ G C+   +  +  L+  MV    VP +  +  L+  L K     +
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420

Query: 418 TLRLYKEMLEAKITPSV 434
              ++ E+ E   +P V
Sbjct: 421 VCEIFHELTERGFSPDV 437



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 164/303 (54%), Gaps = 4/303 (1%)

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L++   K+G         ++M      P+ +TY  L++ LC   + E A  + + M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   NV +Y+ LI G C+   +++A  + ++M + G +PNVVT+ SL+ G CK G + 
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L++ MV +   PD VV+  LIDG SK G+M E  RL++EMLE    P+VFT +SL+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G      + F +   +     C PN   +  ++   C  G +++A +LF +MRS
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQG----CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  +Y T++RG+    +  +   LL +MI+ G+ PD V   +++ GY ++G L  
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 562 AFR 564
           A +
Sbjct: 316 AIK 318



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 5/366 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P+VFS   LI        ++EA  +  ++      P +    +LL+GL K GK     +
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +  MV  G   D V Y VLID    +GD+ +A  LF+EM++KG  PTV  Y  L+ G  
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +    +S+F+ M   G VPN++T+N L+DG+CK+ D+  A   + EM      P+VV
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+ G+C  G+   A      M + GV P+I  YN LIDG+ K+G L  A+ L  E+
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  + PD F+Y+ +I  LC  G++  A  + + M   G   +      L+ G C+   +
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            ++  +   M +    P +  ++ L+   CKA   D    ++ E+  +   PDV +   +
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 406 IDGLSK 411
           ++ L +
Sbjct: 444 LETLRR 449



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 178/355 (50%), Gaps = 6/355 (1%)

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            ++    +H+N     +++  L++ L K G        +  M   G  PN + Y  L+  
Sbjct: 4   FQWAGSQVHYN--HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C+A    EA S+   M     SP+VF+Y+ILI GLC   +++ A  LL +M   G   N
Sbjct: 62  LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVTY SL+ G CK G +++A+ + S+M  +G  P+ V ++ LIDG  K G++  A  L+ 
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM+ K  +P V  + +L+ G S+ G       L+K+ML     P++FT ++L+ G  K G
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG 241

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +  A   FLE         C P+ V Y  +I+ +C  G+  +A +L  +M    + PD 
Sbjct: 242 DMVEAHRLFLEMRSLG----CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +Y  ++ G  ++  +   + L  ++ K G+ PDA     ++      G + +AF
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + +L+    +MG ++EA+ ++ ++      P     N L++G  KKG     +  +
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM+  G +  V TY  L+     +G+  +  +LF +M+ +G  P +  +  L+ G C  
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             MVEA  +F  MR  G  P++ +YN L+ G C     + A     EM+   + P++V++
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+DG  K G L  A   F  + K G+ P+ F Y+ +ID  C+AG +  A  +  +M  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +PD      L+ GLC   +L  +  L Q M K   +  +  YN L+   CK    + 
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
              +  ++TE+G  P+V     +++   ++ + DAA
Sbjct: 421 VCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 4/282 (1%)

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +YN L++ L   G+ +   G    M   G + N  TY  L+   C+    E+A SV  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M  +G  PNV ++S LI G C+   +D A  L  EM+     P+VV + +L+ GL K G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +KE + L+  M+     P     + LI G  K G +  A   F E  +K     C P  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG----CIPTV 192

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y +++      G+  +   LF DM      P+  T+  +L G  +   M++   L  +
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
           M  +G  PD V    ++RG    G    A R    +  S +G
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 242/461 (52%), Gaps = 4/461 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L  LIK  +F    + ++EMV C    D   Y   I   C   ++  A  L   M  KG
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKG 225

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++ + V Y +L++GLC  N+++EA  +  SM E G+V +  TY  L+ G+C+  ++  AL
Sbjct: 226 VKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMAL 285

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   +ML  +  P+V +   ++DGL K G +  A     H+ + G+ PN+F  N LID  
Sbjct: 286 EMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKL 345

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK     EA  L   M    + P+  TY ILI  LC  G ++ A  +  +M ++GI   V
Sbjct: 346 CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTV 405

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             YNSLI+GYC+  +  +A  + ++M EKG+ P+  ++S LI G C+ G++ +AM L+ E
Sbjct: 406 YPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHRE 465

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M    +  +V  FT LI G  KDGNM E  RL+ +M+++ + P+  T + +I G  + G 
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A   + +  D+      +P++  Y ++I  LC     +KA +   D+ ++ +  ++ 
Sbjct: 526 VRKAFQLYDQMVDRG----LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSF 581

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + TT++ G  +  R+ +   +  +M   G+  D +   V+V
Sbjct: 582 SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 263/545 (48%), Gaps = 35/545 (6%)

Query: 50  FNPSVFST--LIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           F PSV S   ++    + GHI++A  +     ++ ++P + ACNAL++ L K  +F    
Sbjct: 296 FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +  M   GL  + VTY +LI   C +G +  AL +FD M +KGI  TV  Y  LI+G 
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  +   +A  +   M E G+ P+  +Y+ L+ G C+  D+  A+E + EM  + +  NV
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF  L+ G CK G +  A   F  M    V PN   +N +I+G+C+ GN+ +A  L  +
Sbjct: 476 YTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQ 535

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    ++PD +TY  LI  LC       A+  +  +    ++ N  +  +L+ G+CKEG 
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGR 595

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +   +  +M  +GV+ ++++F+ ++    K  + +    L+ EM  K + PD V  T 
Sbjct: 596 LTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTC 655

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA----------- 453
           +ID  SK+ N+ + L  + +M+    +P+V T + LI+ L K+G +S+A           
Sbjct: 656 MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGR 715

Query: 454 -----------LNFF-----LEKTDKTDGGY---CSPNHVLYAAIIQALCYDGQILKASK 494
                      L+F      LEK           C  N V +  +I+  C  GQI  A  
Sbjct: 716 FLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAID 775

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +       PD  +Y+T++  L +   +     L  +M+  G+ PD V   +++R   
Sbjct: 776 LMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCN 835

Query: 555 ENGDL 559
            +G+ 
Sbjct: 836 IHGEF 840



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 274/537 (51%), Gaps = 11/537 (2%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +F+ +   + P  +  V++  I A+ E+ +++ A  +  ++E   V  +    N L+ GL
Sbjct: 182 LFDEMVQCKFP-LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGL 240

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            +  +     E    MV  G+VAD VTY  L+   C   ++  AL + D+M+     P+V
Sbjct: 241 CRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSV 300

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
              + ++ GL     + +A  +   + E G+VPNL+  NAL+D  CK      A   +  
Sbjct: 301 ASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M +  L+PN VT+ +L+  LCK G +  A   F  M + G+   ++ YN LI+G+C+  N
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             +A  L +EM +  ++P   +Y+ LI GLC  G L  A  L ++M + G+  NV T+ +
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI G+CK+G+M++A  +  +M +  V PN VTF+ +I+G C+ GN+  A  LY +MV + 
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD   + +LI  L       +      ++    +  + F++++L++G  K GR++   
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 455 NFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           + + E +         S   ++YAA+     +DG+  K S LF +M+   ++PDN  +T 
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALK---LHDGE--KISVLFREMKEKGVKPDNVFHTC 655

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRCSEFL 569
           M+    + + ++  +     MI  G  P+ V   V++    ++G L SA   C E L
Sbjct: 656 MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEML 712



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 209/476 (43%), Gaps = 79/476 (16%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI +  + G +++AL ++ ++    +   +   N+L+NG  +   F       
Sbjct: 369 NEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV  GL     +Y  LI   C +GD+  A+ L  EM   G+   V  +T LI G C +
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD 488

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP----- 222
             M EA  +F  M +  VVPN  T+N +++GYC+V +V +A + Y +M+   L P     
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548

Query: 223 ------------------------------NVVTFGVLMDGLCKVG----------ELRA 242
                                         N  +   LM G CK G          E+RA
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608

Query: 243 AGN-------------------------FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            G                           F  M + GV P+   + C+ID H K  N+ +
Sbjct: 609 RGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQ 668

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A++   +M     SP+V TY +LI  LC  G L  A+ L ++M     L N  TYN  +D
Sbjct: 669 ALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLD 728

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
               EG++EKA  + + + E G   N VTF++LI G CKAG I  A+ L          P
Sbjct: 729 FLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFP 787

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL-----IHGLFKNG 448
           D + ++ +I+ L K G++ +  +L+ EML   + P +   + L     IHG F  G
Sbjct: 788 DCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKG 843



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 193/382 (50%), Gaps = 4/382 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI  F + G+++EA  ++ K+    V+P     N ++ G  + G     ++ Y
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  GL  D  TY  LI   C     MKA    D++ +  +       T L++G C E
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKE 593

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ E   ++  MR  GV  +L ++  ++    K+ D  +    + EM    ++P+ V  
Sbjct: 594 GRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFH 653

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++D   K   +  A N +  M   G  PN+  Y  LI+  CK+G L  A  LC EM  
Sbjct: 654 TCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV 713

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ FTYN  +  L   G+LE A+ +L     EG LAN VT+N+LI G+CK G ++ 
Sbjct: 714 GRFLPNSFTYNCFLDFLANEGELEKAK-VLHATILEGCLANTVTFNTLIKGFCKAGQIQG 772

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +    TE G  P+ +++S++I+  CK G+I+ A  L+ EM+ K L PD+V +  LI 
Sbjct: 773 AIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832

Query: 408 GLSKDGNMKETLRLYKEMLEAK 429
             +  G   + L +Y +M+  K
Sbjct: 833 WCNIHGEFDKGLGIYSDMVNLK 854



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 31/370 (8%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   ++  L K+ +   A + F  M +     + +VY   I  +C+  NL  A  L + M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E   +      YN+L+ GLC   ++  A  +   M + GI+A+ VTY +L+ G+C+  ++
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E AL +   M      P+V + S ++DG  K G+ID A  L   +    +VP++    AL
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK-- 463
           ID L KD   +E  RL++ M    + P+  T + LIH L K G + +AL  F    +K  
Sbjct: 342 IDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401

Query: 464 ---------TDGGYC--------------------SPNHVLYAAIIQALCYDGQILKASK 494
                       GYC                    +P+   Y+ +I  LC  G +  A +
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M  + +  +  T+TT++ G  +   M +   L   MI   +VP+ V   VM+ GY 
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC 521

Query: 555 ENGDLKSAFR 564
             G+++ AF+
Sbjct: 522 RVGNVRKAFQ 531



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 112/316 (35%), Gaps = 66/316 (20%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +L+     GI     T + ++    K      A  +  +M +     +   +++ I 
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIR 203

Query: 373 GQCKAGNIDAAMGLYTE-----------------------------------MVIKSLVP 397
             C+  N+D A GL T                                    MV + +V 
Sbjct: 204 AYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVA 263

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL--- 454
           D V +  L+ G  +   ++  L +  +ML     PSV + S ++ GL K G I  A    
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323

Query: 455 ----------NFF--------------LEKTDKTDGGYCS----PNHVLYAAIIQALCYD 486
                     N F                + ++   G  +    PN V YA +I +LC  
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKR 383

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G +  A  +F  MR   +R     Y +++ G  +         LL +M++ G+ P A   
Sbjct: 384 GMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASY 443

Query: 547 QVMVRGYQENGDLKSA 562
             ++ G    GDL SA
Sbjct: 444 SPLIAGLCRKGDLASA 459


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 248/482 (51%), Gaps = 22/482 (4%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EM+  G+V + V       C CG G   KA  +  EM+ KG  P    Y+ +I  LC+
Sbjct: 406 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCD 465

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +K+ +A  +F  M++ G+VP++YTY  L+D +CK   + +A  ++ EML  N  PNVVT
Sbjct: 466 ASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVT 525

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+    K  ++  A   F  M   G  PN+  Y  LIDGHCKAG + +A  + + M+
Sbjct: 526 YTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585

Query: 287 K----------FEI------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
                      F++      +P++ TY  L+ GLC   ++E A  LL  M   G   N +
Sbjct: 586 GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQI 645

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y++LIDG+CK G +E A  V  +M+E+G  PN+ T+SSLI+   K   +D  + + ++M
Sbjct: 646 VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +  S  P+VV++T +IDGL K G  +E  RL  +M E    P+V T +++I G  K G+I
Sbjct: 706 LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKI 765

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
              L  + +   K     C+PN + Y  +I   C  G + +A +L  +M+         +
Sbjct: 766 EQCLELYRDMCSKG----CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISS 821

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           Y  ++ G  R    +  + LL ++ +   VP   + ++++  + + G L+ A    E + 
Sbjct: 822 YRKIIEGFNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEIS 879

Query: 571 ES 572
            S
Sbjct: 880 SS 881



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 262/561 (46%), Gaps = 33/561 (5%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGL 94
           +AL+ LE  +F P    ++ ++    E    +EA+ +    R I  +P +     LL+G 
Sbjct: 258 DALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGC 317

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           + KG+          M+  G   +   +  L+   C   D   A  LF +MI  G +P  
Sbjct: 318 LGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGY 377

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           ++Y I I  +C+  ++        AE  +  M + GVV N    +      C     ++A
Sbjct: 378 LLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKA 437

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            E   EM+     P+  T+  ++  LC   ++  A   F  M K G+ P+++ Y  LID 
Sbjct: 438 FEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDS 497

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A +   EM +   +P+V TY  LI       ++  A  L + M  EG   N
Sbjct: 498 FCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPN 557

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE-----------------PNVVTFSSLI 371
           VVTY +LIDG+CK G ++KA  + ++M +  +E                 PN++T+ +L+
Sbjct: 558 VVTYTALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALV 616

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CKA  ++ A  L   M +    P+ +V+ ALIDG  K G ++    ++ +M E    
Sbjct: 617 DGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYC 676

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+++T SSLI+ LFK  R    L+  L+   K     C+PN V+Y  +I  LC  G+  +
Sbjct: 677 PNLYTYSSLINSLFKEKR----LDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +L   M      P+  TYT M+ G  +  ++   + L  DM   G  P+ +  +V++ 
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792

Query: 552 GYQENGDLKSAFRCSEFLKES 572
                G L  A R  + +K++
Sbjct: 793 HCCSTGLLDEAHRLLDEMKQT 813



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 230/492 (46%), Gaps = 24/492 (4%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L    K +  +  +EEM   G+V  V TY +LID  C  G + +A N FDEM+     P 
Sbjct: 463 LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPN 522

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV YT LIH      K+ +A  +F  M   G  PN+ TY AL+DG+CK   +++A + Y 
Sbjct: 523 VVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYA 582

Query: 214 EM----------LHHNLQ------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            M          ++  L       PN++T+G L+DGLCK   +  A      M+  G  P
Sbjct: 583 RMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEP 642

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N  VY+ LIDG CK G L  A  +  +M +    P+++TY+ LI  L    +L+    +L
Sbjct: 643 NQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVL 702

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM +     NVV Y  +IDG CK G  E+A  +  +M E G  PNV+T++++IDG  K 
Sbjct: 703 SKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKI 762

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I+  + LY +M  K   P+ + +  LI+     G + E  RL  EM +      + + 
Sbjct: 763 GKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSY 822

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
             +I G  +    S  L       D+       P   LY  +I      G++  A  L  
Sbjct: 823 RKIIEGFNREFITSIGL------LDELSENESVPVESLYRILIDNFIKAGRLEGALNLLE 876

Query: 498 DMRSDN--LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           ++ S       +   YT+++  L  A ++     L A MI   +VP+      +++G   
Sbjct: 877 EISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTR 936

Query: 556 NGDLKSAFRCSE 567
            G  + A + S+
Sbjct: 937 VGKWQEALQLSD 948



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 228/534 (42%), Gaps = 64/534 (11%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NAL+   ++  K D+ +  + EM   G   D  T G      C  G    AL+L ++   
Sbjct: 209 NALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK--- 265

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +   P  V Y  ++ GLC  +   EA  +   MR    +PN+ TY  L+ G      + R
Sbjct: 266 EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGR 325

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
                  M+     PN   F  L+   CK  +   A   F  M K G  P   +YN  I 
Sbjct: 326 CKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIG 385

Query: 268 GHCK-----------------------------------------AGNLFEAMSLCSEME 286
             C                                          AG   +A  +  EM 
Sbjct: 386 SICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM 445

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD  TY+ +I  LC   ++E A  L ++M K GI+ +V TY  LID +CK G ++
Sbjct: 446 SKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQ 505

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A +   +M      PNVVT++SLI    KA  +  A  L+  M+++   P+VV +TALI
Sbjct: 506 QARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALI 565

Query: 407 DGLSKDGNMKETLRLYKEM---LEAKI-------------TPSVFTVSSLIHGLFKNGRI 450
           DG  K G + +  ++Y  M   +E+               TP++ T  +L+ GL K  R+
Sbjct: 566 DGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRV 625

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E  D      C PN ++Y A+I   C  G++  A ++F  M      P+  T
Sbjct: 626 EEA----HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYT 681

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           Y++++  L + KR+  V+ +L+ M++    P+ VI   M+ G  + G  + A+R
Sbjct: 682 YSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYR 735



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 199/414 (48%), Gaps = 20/414 (4%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           LE  K N   ++ LI    + G I++A  +Y             A + G I+    D  +
Sbjct: 551 LEGSKPNVVTYTALIDGHCKAGQIDKACQIY-------------ARMQGDIESSDIDMYF 597

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  +         +++TYG L+D  C    V +A  L D M   G EP  ++Y  LI G 
Sbjct: 598 KLDDNDCE---TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGF 654

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   K+  A+ +F  M E G  PNLYTY++L++   K   ++  L+   +ML ++  PNV
Sbjct: 655 CKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNV 714

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +  ++DGLCKVG+   A    + M + G +PN+  Y  +IDG  K G + + + L  +
Sbjct: 715 VIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRD 774

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     +P+  TY +LI   C  G L+ A  LL +M +     ++ +Y  +I+G+ +E  
Sbjct: 775 MCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE-- 832

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS--LVPDVVVF 402
              ++ +  +++E    P    +  LID   KAG ++ A+ L  E+       V +  ++
Sbjct: 833 FITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLY 892

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           T+LI+ LS    + +   LY  M+   + P + T   LI GL + G+   AL  
Sbjct: 893 TSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 188/458 (41%), Gaps = 50/458 (10%)

Query: 120 VTYGVLID--CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           V Y  LI+  CC    +   +     ++ D   E    +   LI   C       A    
Sbjct: 134 VVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEEL 193

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             +++ G   +  TYNAL+  + +   ++ A   + EM +   + +  T G     LCK 
Sbjct: 194 GRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKA 253

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G     G+    + K    P+   YN ++ G C+A    EAM +   M      P+V TY
Sbjct: 254 GR---CGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTY 310

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL-------- 349
            IL+ G  G GQL   + +L  M  EG   N   +NSL+  YCK  D   A         
Sbjct: 311 RILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIK 370

Query: 350 ---------------SVC------------------SQMTEKGVEPNVVTFSSLIDGQCK 376
                          S+C                  S+M + GV  N V  S+     C 
Sbjct: 371 CGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCG 430

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG  D A  +  EM+ K  VPD   ++ +I  L     +++   L++EM +  I PSV+T
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            + LI    K G I  A N+F    D+     C+PN V Y ++I A     ++  A+KLF
Sbjct: 491 YTILIDSFCKAGLIQQARNWF----DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             M  +  +P+  TYT ++ G  +A ++     + A M
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 123/338 (36%), Gaps = 77/338 (22%)

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI+  C  G    A   L ++   G  A+  TYN+LI  + +   ++ A  V  +M+ 
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 358 KGVE--------------------------------PNVVTFSSLIDGQCKAGNIDAAMG 385
            G                                  P+ V ++ ++ G C+A     AM 
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMD 293

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           +   M   S +P+VV +  L+ G    G +    R+   M+     P+    +SL+H   
Sbjct: 294 ILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYC 353

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD------------------- 486
           K+   S A   F     K     C P ++LY   I ++C +                   
Sbjct: 354 KSRDYSYAYKLF----KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEM 409

Query: 487 ----------------------GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                                 G+  KA ++  +M S    PD+ TY+ ++  L  A ++
Sbjct: 410 LDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKV 469

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               +L  +M K GIVP      +++  + + G ++ A
Sbjct: 470 EKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 258/518 (49%), Gaps = 14/518 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + F+ L+ A  E G  + A ++ RK+E   V P     N LLN   KKG++ +  +  + 
Sbjct: 176 ATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDC 235

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+  DV TY V ID  C      K   L   M    + P  + Y  LI G   E K
Sbjct: 236 MASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGK 295

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  +F  M    ++PN  TYN L+ G+C   ++  AL     M+ H L+PN VT+G 
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGA 355

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GL K  E     +    M   GV  +   Y  +IDG CK G L EA+ L  +M K  
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++PDV T+++LI G   VG++  A+ ++ KMYK G++ N + Y++LI  YCK G +++AL
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEAL 475

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +  + M   G   +  T + L+   C+ G ++ A      M    L P+ V F  +I+G 
Sbjct: 476 NAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G+  +   ++ +M      PS+FT   L+ GL   G I+ AL FF           C
Sbjct: 536 GNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLR-------C 588

Query: 470 SPN---HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            PN   +V++   + + C  G +  A  L ++M +++  PDN TYT ++ GL +  +++ 
Sbjct: 589 IPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVA 648

Query: 527 VMMLLADMIKMGIV-PDAVINQVMVRGYQENGDLKSAF 563
            ++L    I+ G++ P+  +   +V G  ++G  ++A 
Sbjct: 649 ALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAAL 686



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 266/563 (47%), Gaps = 52/563 (9%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  V P     N L++G +++GK +   + ++EM L  L+ + +TY  LI   C  G++
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L D M+  G+ P  V Y  L++GL    +     S+   MR  GV  +  +Y A+
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG CK   +  A++   +ML  ++ P+VVTF VL++G  +VG++  A      M K G+
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y+ LI  +CK G L EA++  + M       D FT N+L+   C  G+LE AE 
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG-- 373
            +  M + G+  N VT++ +I+GY   GD  KA SV  +M   G  P++ T+  L+ G  
Sbjct: 512 FMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLC 571

Query: 374 ---------------------------------QCKAGNIDAAMGLYTEMVIKSLVPDVV 400
                                             C++GN+  A+ L  EMV    +PD  
Sbjct: 572 IGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF 631

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKI---TPSVFTVSSLIHGLFKNGRISNALNFF 457
            +T LI GL K G +   L L  + +E  +    P+V+T  SL+ GL K+G    AL  F
Sbjct: 632 TYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYT--SLVDGLLKHGHARAALYIF 689

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  +K       P+ V +  II      G+  K + + S M+S NL  +  TY  +L G
Sbjct: 690 EEMLNKD----VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHG 745

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             +   M    ML  DMI+ G +PD      ++ GY ++     A +   ++        
Sbjct: 746 YAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWI-------- 797

Query: 578 ETEGHTTRSFLGHLKPTVYKEQD 600
             EGH    F  ++  T + E++
Sbjct: 798 TLEGHVIDRFTFNMLITKFCERN 820



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 272/599 (45%), Gaps = 42/599 (7%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLI-- 59
           ++L  A++Y  A+  +K + +  +          SVF AL  +  I   NP+VF  LI  
Sbjct: 62  HILVRARMYNFAKTTLKHLLQLPIGLN-------SVFGALMETYPICNSNPAVFDLLIRV 114

Query: 60  -IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
            +    +G   +  ++     + P++  CN +L  L+K+ K D  W F++ M+  G+  D
Sbjct: 115 CLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPD 174

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V T+ +L++  C +G    A  L  +M + G+ PT V Y  L++  C + +   A  +  
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLID 234

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+  ++ TYN  +D  C+ +   +       M  + + PN +T+  L+ G  + G
Sbjct: 235 CMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREG 294

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A   F  M+ F + PN   YN LI GHC  GN+ EA+ L   M    + P+  TY 
Sbjct: 295 KIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYG 354

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GL    +      +L++M   G+  + ++Y ++IDG CK G +E+A+ +   M + 
Sbjct: 355 ALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKV 414

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            V P+VVTFS LI+G  + G I+ A  +  +M    LVP+ ++++ LI    K G +KE 
Sbjct: 415 SVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA 474

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT----------------- 461
           L  Y  M  +      FT + L+    + G++  A  F    +                 
Sbjct: 475 LNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIING 534

Query: 462 --------------DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
                         DK +     P+   Y  +++ LC  G I +A K F  +R      D
Sbjct: 535 YGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVD 594

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           N  + T L    R+  + D + L+ +M+    +PD      ++ G  + G + +A   S
Sbjct: 595 NVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLS 653



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/601 (27%), Positives = 265/601 (44%), Gaps = 80/601 (13%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N   ++TLI      G+I EAL   R ++V+      P      ALLNGL K  +F  V 
Sbjct: 314 NSITYNTLIAGHCTTGNIGEAL---RLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              E M + G+    ++Y  +ID  C  G + +A+ L D+M+   + P VV +++LI+G 
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               K+  A+ +   M + G+VPN   Y+ L+  YCK+  +  AL  Y  M H     + 
Sbjct: 431 FRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADH 490

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T  VL+   C+ G+L  A  F  HM++ G+ PN   ++C+I+G+  +G+  +A S+  +
Sbjct: 491 FTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDK 550

Query: 285 MEKFEISPDVFTYNILIKGLC-----------------------------------GVGQ 309
           M  F   P +FTY  L+KGLC                                     G 
Sbjct: 551 MNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGN 610

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFS 368
           L  A  L+ +M     L +  TY +LI G CK+G +  AL +  +  EKG+  PN   ++
Sbjct: 611 LSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYT 670

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           SL+DG  K G+  AA+ ++ EM+ K + PD V F  +ID  S+ G   +   +   M   
Sbjct: 671 SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSK 730

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSPN--- 472
            +  ++ T + L+HG  K  R + A  F L K     G             GYC      
Sbjct: 731 NLCFNLATYNILLHGYAK--RHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFD 788

Query: 473 -------------HVL----YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                        HV+    +  +I   C   ++ KA +L   M    + P+  TY  + 
Sbjct: 789 VAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALF 848

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            GL+R         +L  +++ G VP       ++ G    G++K A +  + +K   I 
Sbjct: 849 NGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908

Query: 576 S 576
           S
Sbjct: 909 S 909



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 257/566 (45%), Gaps = 55/566 (9%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFY 107
            N  ++STLI  + +MG+++EAL  Y  +     +     CN L+    + GK +    F 
Sbjct: 454  NGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFM 513

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
              M   GL  + VT+  +I+     GD +KA ++FD+M   G  P++  Y  L+ GLC  
Sbjct: 514  NHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIG 573

Query: 168  NKMVEAESMFRSMRECGVVPNLY---TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
              + EA   F  +R    +PN      +N  +   C+  +++ A+   +EM+ ++  P+ 
Sbjct: 574  GHINEALKFFHRLR---CIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDN 630

Query: 225  VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+  L+ GLCK G++ AA        + G+  PN  VY  L+DG  K G+   A+ +  
Sbjct: 631  FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFE 690

Query: 284  EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            EM   ++ PD   +N++I      G+      +L  M  + +  N+ TYN L+ GY K  
Sbjct: 691  EMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750

Query: 344  DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
             M +   +   M   G  P+  ++ SLI G C++ + D A+ +   + ++  V D   F 
Sbjct: 751  AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810

Query: 404  ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEK 460
             LI    +   MK+   L K+M +  + P+V T ++L +GL +      A   L   LE 
Sbjct: 811  MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 461  TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                      P +  Y  +I  +C  G I  A KL  +M++  +   N   + ++RGL  
Sbjct: 871  GS-------VPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLAN 923

Query: 521  AKRMLDVMMLLADMIKMGIVP-----------------------------------DAVI 545
            +K++ + + +L  M++M I+P                                   D V 
Sbjct: 924  SKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVA 983

Query: 546  NQVMVRGYQENGDLKSAFRCSEFLKE 571
              V++ G   NGD+++AF+  E +K+
Sbjct: 984  YNVLISGLCANGDIEAAFKLYEEMKQ 1009



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 234/505 (46%), Gaps = 13/505 (2%)

Query: 36   YSVFNALNSLEIPKFNPSVFST--LIIAFSEMGHIEEALWVYRKIEVLP-AIQAC--NAL 90
            +SVF+ +NS       PS+F+   L+      GHI EAL  + ++  +P A+     N  
Sbjct: 545  FSVFDKMNSF---GHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTK 601

Query: 91   LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
            L    + G          EMV    + D  TY  LI   C +G ++ AL L  + I+KG+
Sbjct: 602  LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661

Query: 151  -EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
              P   +YT L+ GL        A  +F  M    V P+   +N ++D Y +    ++  
Sbjct: 662  LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 210  EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            +    M   NL  N+ T+ +L+ G  K   +      +  M + G  P+ F ++ LI G+
Sbjct: 722  DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781

Query: 270  CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            C++ +   A+ +   +       D FT+N+LI   C   +++ A  L+++M +  ++ NV
Sbjct: 782  CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841

Query: 330  VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             TYN+L +G  +  D  KA  V   + E G  P    + +LI+G C+ GNI  AM L  E
Sbjct: 842  DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 390  MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
            M    +    V  +A++ GL+    ++  + +   MLE +I P+V T ++L+H   K   
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961

Query: 450  ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
            ++ AL    E     +  +   + V Y  +I  LC +G I  A KL+ +M+  +L P+  
Sbjct: 962  VAKAL----ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTS 1017

Query: 510  TYTTMLRGLLRAKRMLDVMMLLADM 534
             Y  ++         ++   LL D+
Sbjct: 1018 IYIVLIDSFCAGNYQIESEKLLRDI 1042



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 194/386 (50%), Gaps = 14/386 (3%)

Query: 194 ALMDGYCKVADVNR----ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           A+ D   +V   NR    A++ ++ M    L P+V T  +++  L K  ++    +FF  
Sbjct: 106 AVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKG 165

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+ P++  +N L++  C+ G    A  L  +ME+  + P   TYN L+   C  G+
Sbjct: 166 MLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGR 225

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  L+  M  +GI  +V TYN  ID  C++    K   +  +M    V PN +T+++
Sbjct: 226 YKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNT 285

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G  + G I+ A  ++ EM + +L+P+ + +  LI G    GN+ E LRL   M+   
Sbjct: 286 LISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHG 345

Query: 430 ITPSVFTVSSLIHGLFKN---GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           + P+  T  +L++GL+KN   G +S+ L       ++   G    +H+ Y A+I  LC +
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSIL-------ERMRMGGVRVSHISYTAMIDGLCKN 398

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A +L  DM   ++ PD  T++ ++ G  R  ++ +   ++  M K G+VP+ ++ 
Sbjct: 399 GMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILY 458

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKES 572
             ++  Y + G LK A      +  S
Sbjct: 459 STLIYNYCKMGYLKEALNAYAVMNHS 484



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            NP+V+++L+    + GH   AL+++ ++   +V P   A N +++   +KGK   V +  
Sbjct: 665  NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDIL 724

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
              M    L  ++ TY +L+     +  + +   L+ +MI  G  P    +  LI G C  
Sbjct: 725  STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
                 A  + R +   G V + +T+N L+  +C+  ++ +A E   +M    + PNV T+
Sbjct: 785  KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTY 844

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              L +GL +  +   A      + + G  P    Y  LI+G C+ GN+  AM L  EM+ 
Sbjct: 845  NALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKT 904

Query: 288  FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              IS      + +++GL    ++E A  +L  M +  I+  V T+ +L+  YCKE ++ K
Sbjct: 905  LGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAK 964

Query: 348  ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            AL + S M    V+ +VV ++ LI G C  G+I+AA  LY EM  + L P+  ++  LID
Sbjct: 965  ALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLID 1024

Query: 408  GLSKDGNMKETLRLYKEMLEAKI 430
                     E+ +L +++ + ++
Sbjct: 1025 SFCAGNYQIESEKLLRDIQDREL 1047


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 257/519 (49%), Gaps = 10/519 (1%)

Query: 27  KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA 86
           K+ +PH     + N ++S +  + N   + T++  F E     E   ++ K+ +   +  
Sbjct: 158 KTSRPH-AALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSL 214

Query: 87  C----NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           C    N LL  L KKG      +  ++++  G++ ++ TY + I   C +G++  A+ + 
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             +I++G +P V+ Y  LI+GLC  +K  EAE     M   G+ P+ YTYN L+ GYCK 
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V  A     + + +   P+  T+  L+DGLC  GE   A   F      G+ PN+ +Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G    G + EA  L +EM +  + P+V T+NIL+ GLC +G +  A+GL++ M  
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +G   ++ T+N LI GY  +  ME AL +   M + GV+P+V T++SL++G CK    + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            M  Y  MV K   P++  F  L++ L +   + E L L +EM    + P   T  +LI 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  KNG +  A   F +  +       +P    Y  II A      +  A KLF +M   
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDR 631

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L PD  TY  M+ G  +   +      L +M++ G +P
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 252/521 (48%), Gaps = 7/521 (1%)

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G ++EA+ V+ +++     P + + NA+++ L+  G FD   + Y  M   G+  D
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V ++ + +   C       AL L + M  +G E  VV Y  ++ G   EN   E   +F 
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   GV   L T+N L+   CK  DV    +   +++   + PN+ T+ + + GLC+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           EL  A      + + G  P++  YN LI G CK     EA     +M    + PD +TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G ++ AE ++      G + +  TY SLIDG C EG+  +AL++ ++   K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++PNV+ +++LI G    G I  A  L  EM  K L+P+V  F  L++GL K G + + 
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L K M+     P +FT + LIHG     ++ NAL       D        P+   Y +
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG----VDPDVYTYNS 501

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC   +     + +  M      P+  T+  +L  L R +++ + + LL +M    
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           + PDAV    ++ G+ +NGDL  A+     ++E+   SS T
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 210/410 (51%), Gaps = 4/410 (0%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           PK +   ++ LI    +    +EA     K+    + P     N L+ G  K G      
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               + V  G V D  TY  LID  C +G+  +AL LF+E + KGI+P V++Y  LI GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            N+  ++EA  +   M E G++P + T+N L++G CK+  V+ A      M+     P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF +L+ G     ++  A      M   GV P+++ YN L++G CK     + M     
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +   +P++FT+NIL++ LC   +L+ A GLL++M  + +  + VT+ +LIDG+CK GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 345 MEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++ A ++  +M E   V  +  T++ +I    +  N+  A  L+ EMV + L PD   + 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            ++DG  K GN+    +   EM+E    PS+ T+  +I+ L    R+  A
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 174/357 (48%), Gaps = 6/357 (1%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P  F+  +LI      G    AL ++ +     + P +   N L+ GL  +G      
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +   EM   GL+ +V T+ +L++  C  G V  A  L   MI KG  P +  + ILIHG 
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             + KM  A  +   M + GV P++YTYN+L++G CK +     +E Y  M+     PN+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF +L++ LC+  +L  A      M    V P+   +  LIDG CK G+L  A +L  +
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 285 MEK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           ME+ +++S    TYNI+I        +  AE L Q+M    +  +  TY  ++DG+CK G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           ++        +M E G  P++ T   +I+  C    +  A G+   MV K LVP+ V
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 194/408 (47%), Gaps = 4/408 (0%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +Y   +     + K+ EA ++F  M      P +++YNA+M         ++A + Y  M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + P+V +F + M   CK     AA     +M+  G   N+  Y  ++ G  +    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            E   L  +M    +S  + T+N L++ LC  G ++  E LL K+ K G+L N+ TYN  
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G C+ G+++ A+ +   + E+G +P+V+T+++LI G CK      A     +MV + L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD   +  LI G  K G ++   R+  + +     P  FT  SLI GL   G  + AL 
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E   K       PN +LY  +I+ L   G IL+A++L ++M    L P+  T+  ++
Sbjct: 378 LFNEALGKG----IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            GL +   + D   L+  MI  G  PD     +++ GY     +++A 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)

Query: 35  CYSVFNALNSLEIPK-FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACN 88
           C S  + L  + I K + P +F+   LI  +S    +E AL +   +    V P +   N
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +LLNGL K  KF+ V E Y+ MV  G   ++ T+ +L++  C    + +AL L +EM +K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV---------------------- 186
            + P  V +  LI G C    +  A ++FR M E   V                      
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620

Query: 187 --------------PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
                         P+ YTY  ++DG+CK  +VN   +F  EM+ +   P++ T G +++
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            LC    +  A      M + G+ P      C +D
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD 715


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 255/479 (53%), Gaps = 9/479 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL-- 81
           +L+KS K +H   S+F  +    I K N   F+ LI  F ++G I  A  V  KI  +  
Sbjct: 79  SLVKS-KHYHTVLSLFQKMEYRGI-KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGY 136

Query: 82  -PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P     N  + G   KG+      F++++V  G   D V+YG LI+  C  G+   AL 
Sbjct: 137 EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALE 196

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L   +  K ++  VV+Y+ +I  +C +  + +A  ++  M    +  N+ TY+AL+ G+C
Sbjct: 197 LLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            V  +  A+  +++M   N+ P+V TF +L+D  CK G ++ A N    M K G+ P+I 
Sbjct: 257 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIV 316

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+DG+C    +  A S+ + M    ++  V +YNI+I G C +  ++ A  L ++M
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           + + I  NV+TYNSLIDG CK G +  AL +   M ++G +P+++T+SS++D  CK   +
Sbjct: 377 HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV 436

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L  ++  + + P++  +T LIDGL K G +++   +++++L      +V T + +
Sbjct: 437 DKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVM 496

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           I G   +G    AL+   +  D +    C P+ + Y  II +L    +  KA KL  +M
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKDNS----CIPDAITYEIIICSLFDKDENDKAEKLLREM 551



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 250/489 (51%), Gaps = 7/489 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F  ++ +  +  H    L +++K+E   + P     N L+N   + G     +    +++
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D +T    I   C +G + +ALN  D+++  G     V Y  LI+GLC   +  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R +    V  ++  Y+ ++D  CK  +VN A + Y EM+   +  N+VT+  L+
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C VG+L+ A   F  M    + P+++ +N L+D  CK G + EA +  + M K  I 
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TYN L+ G C V ++  A+ +L  M   G+ A V +YN +I+G+CK   +++A+ +
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  K + PNV+T++SLIDG CK+G I  A+ L   M  +   PD++ +++++D L K
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +  + + + L  ++ +  I P+++T + LI GL K GR+ +A N F    D    GY   
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIF---EDLLVKGYNLT 489

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
            +  Y  +IQ  C  G   +A  L S M+ ++  PD  TY  ++  L           LL
Sbjct: 490 VNT-YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548

Query: 532 ADMIKMGIV 540
            +MI  G++
Sbjct: 549 REMITRGLL 557



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 238/469 (50%), Gaps = 4/469 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P       +L  L+K   + +V   +++M   G+  + V + +LI+C C  G +  A ++
Sbjct: 68  PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G EP  +     I G C + ++ +A +    +   G   +  +Y  L++G CK
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V +   ALE    +    +Q +VV +  ++D +CK   +  A + +  M    +  NI  
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C  G L +A+ L ++M    I+PDV+T+NIL+   C  G+++ A+  L  M 
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+GI  ++VTYNSL+DGYC   ++  A S+ + M+ +GV   V +++ +I+G CK   +D
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM  K + P+V+ + +LIDGL K G +   L L   M +    P + T SS++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A+   ++  D+       PN   Y  +I  LC  G++  A  +F D+  
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQG----IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLV 483

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                   TYT M++G        + + LL+ M     +PDA+  ++++
Sbjct: 484 KGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 238/434 (54%), Gaps = 4/434 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+LF +M  +GI+P  V + ILI+  C    +  A S+   + + G  P+  T N  + G
Sbjct: 90  LSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKG 149

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C    +++AL F+ +++      + V++G L++GLCKVGE RAA      +    V  +
Sbjct: 150 FCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLD 209

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +Y+ +ID  CK  N+ +A  L SEM    IS ++ TY+ LI G C VG+L+ A GL  
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM  E I  +V T+N L+D +CKEG +++A +  + M ++G++P++VT++SL+DG C   
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ++ A  +   M  + +   V  +  +I+G  K   + + ++L+KEM   +I P+V T +
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SLI GL K+GRIS AL       D+       P+ + Y++I+ ALC +  + KA  L   
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQ----QPDIITYSSILDALCKNHLVDKAIALLIK 445

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           ++   +RP+  TYT ++ GL +  R+ D   +  D++  G         VM++G+  +G 
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505

Query: 559 LKSAFRCSEFLKES 572
              A      +K++
Sbjct: 506 FDEALSLLSKMKDN 519



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 231/473 (48%), Gaps = 21/473 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ST+I +  +  ++ +A  +Y ++    +   I   +AL++G    GK       + +M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  DV T+ +L+D  C +G V +A N    M+ +GI+P +V Y  L+ G C  N++
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+S+  +M   GV   + +YN +++G+CK+  V++A++ + EM H  + PNV+T+  L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK G +  A      M   G  P+I  Y+ ++D  CK   + +A++L  +++   I
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+++TY ILI GLC  G+LE A  + + +  +G    V TY  +I G+C  G  ++ALS
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF-------- 402
           + S+M +    P+ +T+  +I         D A  L  EM+ + L+   + +        
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFM 571

Query: 403 TALIDGLSKDG----NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            A    L+ D     + +E+    K +LE      V T S++     ++  +        
Sbjct: 572 AAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNM-----RDKDVECPSVIIY 626

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
              D +  GY    +  Y  +IQ  C  G   ++  L S M  +   PD  TY
Sbjct: 627 STCDWSKQGYILDVNT-YTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 39/432 (9%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N N +V+A S+F  +      P    +  ++    K    +  L  + +M +  ++PN V
Sbjct: 47  NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFV 106

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            F +L++  C++G +  A +    + K G  P+    N  I G C  G + +A++   ++
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                  D  +Y  LI GLC VG+   A  LL+++  + +  +VV Y+++ID  CK+ ++
Sbjct: 167 VALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV 226

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + S+M  + +  N+VT+S+LI G C  G +  A+GL+ +M  +++ PDV  F  L
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL------------------------- 440
           +D   K+G +KE       M++  I P + T +SL                         
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346

Query: 441 ----------IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
                     I+G  K   +  A+  F E   K       PN + Y ++I  LC  G+I 
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ----IFPNVITYNSLIDGLCKSGRIS 402

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A +L   M     +PD  TY+++L  L +   +   + LL  +   GI P+     +++
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462

Query: 551 RGYQENGDLKSA 562
            G  + G L+ A
Sbjct: 463 DGLCKGGRLEDA 474



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 164/322 (50%), Gaps = 3/322 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI  F  +G +++A+ ++ K+    + P +   N L++   K+G+        
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 303

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M+  G+  D+VTY  L+D  C   +V  A ++ + M  +G+  TV  Y I+I+G C  
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKI 363

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +F+ M    + PN+ TYN+L+DG CK   ++ ALE    M     QP+++T+
Sbjct: 364 KMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITY 423

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++D LCK   +  A    + +   G+ PN++ Y  LIDG CK G L +A ++  ++  
Sbjct: 424 SSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLV 483

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +  V TY ++I+G C  G  + A  LL KM     + + +TY  +I     + + +K
Sbjct: 484 KGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDK 543

Query: 348 ALSVCSQMTEKGVEPNVVTFSS 369
           A  +  +M  +G+  + + + S
Sbjct: 544 AEKLLREMITRGLLYSFLEYGS 565


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 235/444 (52%), Gaps = 4/444 (0%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
            ++Y  L++     G        +++M+  G  P    Y  L+  LC   +  EA S+FR
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  PN+++Y+ L+ G C+   V+ A E  +EM+    QPNVVT+G L+ GLCK+G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L+ A + F  M   G  P+  VYN LIDG  K G++ EA  L  EM +    P VFTYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ G    G+    + L + M ++G + N+ T+N+L+DG+CK GDM +A  +  +M   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+VV++++L+ G C  G    A  L  EM+   + PD+V +  LIDG SK G +   
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           ++L+ E+ ++ + P  F+ S++I  L + G++  A   F    D    G  +P+  +   
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF---KDMIANG-SAPDAAVVIP 372

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC   ++ ++ +LF  M      P    Y  ++  L +AKR  DV  +  ++ + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
             PD  I++V++   + + D ++A
Sbjct: 433 FSPDVEISKVILETLRRSDDKEAA 456



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 212/403 (52%), Gaps = 4/403 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P       LL  L +  +F+     +  M   G   +V +Y +LI   C    V +A  
Sbjct: 49  VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAE 108

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L +EMID G +P VV Y  L+ GLC   K+ EA  +F  M   G  P+   YN L+DG+ 
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  D+  A   + EML     P V T+  L+ G  + GE     + F  M + G  PNIF
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N L+DG CK G++ EA  L  EM      PDV +YN L++G+C  G+   A+ LL++M
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  ++V+YN LIDGY K G ++ A+ +  ++ + G+EP+  ++S++ID  C+AG +
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            AA  ++ +M+     PD  V   L+ GL +   + E+  L++ M++ +  P +   + L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           ++ L K  R  +    F E T++   G+ SP+  +   I++ L
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTER---GF-SPDVEISKVILETL 447



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 213/437 (48%), Gaps = 6/437 (1%)

Query: 2   FYVLANAKLYKNARCLIKD-VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           F+  A ++++ N   L  + + E L KS +  HV  +  + L +  +P  N   +  L+ 
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVP--NTYTYGYLLR 60

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           +  +    EEA  V+R +      P + + + L+ GL +  K D   E   EM+  G   
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +VVTYG L+   C  G + +A++LF  M+ +G  P  V+Y +LI G   +  M EA  +F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M E G +P ++TYN+L+ G+ +  +  R    + +ML     PN+ TF  L+DG CK+
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A   F+ M   G  P++  YN L+ G C  G   EA  L  EM +  + PD+ +Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           NILI G    G L+ A  L  ++ K G+  +  +Y+++ID  C+ G +  A  V   M  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+      L+ G C+   +  +  L+  MV    VP +  +  L+  L K     +
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420

Query: 418 TLRLYKEMLEAKITPSV 434
              ++ E+ E   +P V
Sbjct: 421 VCEIFHELTERGFSPDV 437



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 164/303 (54%), Gaps = 4/303 (1%)

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L++   K+G         ++M      P+ +TY  L++ LC   + E A  + + M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   NV +Y+ LI G C+   +++A  + ++M + G +PNVVT+ SL+ G CK G + 
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L++ MV +   PD VV+  LIDG SK G+M E  RL++EMLE    P+VFT +SL+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G      + F +   +     C PN   +  ++   C  G +++A +LF +MRS
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQG----CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  +Y T++RG+    +  +   LL +MI+ G+ PD V   +++ GY ++G L  
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 562 AFR 564
           A +
Sbjct: 316 AIK 318



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 184/366 (50%), Gaps = 5/366 (1%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           +P+VFS   LI        ++EA  +  ++      P +    +LL+GL K GK     +
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +  MV  G   D V Y VLID    +GD+ +A  LF+EM++KG  PTV  Y  L+ G  
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +    +S+F+ M   G VPN++T+N L+DG+CK+ D+  A   + EM      P+VV
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  LM G+C  G+   A      M + GV P+I  YN LIDG+ K+G L  A+ L  E+
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  + PD F+Y+ +I  LC  G++  A  + + M   G   +      L+ G C+   +
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            ++  +   M +    P +  ++ L+   CKA   D    ++ E+  +   PDV +   +
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 406 IDGLSK 411
           ++ L +
Sbjct: 444 LETLRR 449



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 178/355 (50%), Gaps = 6/355 (1%)

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            ++    +H+N     +++  L++ L K G        +  M   G  PN + Y  L+  
Sbjct: 4   FQWAGSQVHYN--HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS 61

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C+A    EA S+   M     SP+VF+Y+ILI GLC   +++ A  LL +M   G   N
Sbjct: 62  LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVTY SL+ G CK G +++A+ + S+M  +G  P+ V ++ LIDG  K G++  A  L+ 
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM+ K  +P V  + +L+ G S+ G       L+K+ML     P++FT ++L+ G  K G
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG 241

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +  A   FLE         C P+ V Y  +++ +C  G+  +A +L  +M    + PD 
Sbjct: 242 DMVEAHRLFLEMRSLG----CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +Y  ++ G  ++  +   + L  ++ K G+ PDA     ++      G + +AF
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + +L+    +MG ++EA+ ++ ++      P     N L++G  KKG     +  +
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM+  G +  V TY  L+     +G+  +  +LF +M+ +G  P +  +  L+ G C  
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             MVEA  +F  MR  G  P++ +YN LM G C     + A     EM+   + P++V++
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+DG  K G L  A   F  + K G+ P+ F Y+ +ID  C+AG +  A  +  +M  
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +PD      L+ GLC   +L  +  L Q M K   +  +  YN L+   CK    + 
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
              +  ++TE+G  P+V     +++   ++ + +AA
Sbjct: 421 VCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 4/282 (1%)

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +YN L++ L   G+ +   G    M   G + N  TY  L+   C+    E+A SV  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M  +G  PNV ++S LI G C+   +D A  L  EM+     P+VV + +L+ GL K G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +KE + L+  M+     P     + LI G  K G +  A   F E  +K     C P  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG----CIPTV 192

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y +++      G+  +   LF DM      P+  T+  +L G  +   M++   L  +
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
           M  +G  PD V    ++RG    G    A R    +  S +G
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 5/268 (1%)

Query: 52  PSVFS--TLIIAFS---EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+VF+  +L+  FS   E G ++       +   +P I   N LL+G  K G        
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   G   DVV+Y  L+   C +G   +A  L  EMI  G+ P +V Y ILI G   
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A  +F  + + G+ P+ ++Y+ ++D  C+   V  A   + +M+ +   P+   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+ GLC+   L  +   F  M KF   P I  YN L+   CKA    +   +  E+ 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   SPDV    ++++ L      E AE
Sbjct: 430 ERGFSPDVEISKVILETLRRSDDKEAAE 457


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 267/506 (52%), Gaps = 10/506 (1%)

Query: 56  STLIIA---FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           STL+++   F  + ++ +A+  + ++  +   P I     +L  L+K   +  V   ++ 
Sbjct: 15  STLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQR 74

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M L G+ ++ +T  +LI+  C    +  A ++F +++  G +P ++ YT LI GLC   +
Sbjct: 75  MELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQ 134

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + E+ +    +   G+  +  +Y  L++G CK+     AL    ++     +P+VV +  
Sbjct: 135 VKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNT 194

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DGLCK   +R A + +  M +  VFPN+  Y  LI G C  G L +A  L +EM    
Sbjct: 195 IIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN 254

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++P+V T+N L+ GLC  G++  A+ L+  M KEG+  +V TYN+L+DGY    +  KA 
Sbjct: 255 VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +V + M + GV  +V ++S +I G  K   +D AM L+  M  ++++PDVV +++LIDGL
Sbjct: 315 NVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K G +   L+   EM +    P+V T +SLI  L K+ ++  A+    +  D+      
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG----I 430

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             N   Y  ++  LC DG++  A K+F D+       D  TY+ M+ GL +     + + 
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALT 490

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQE 555
           LL+ M   G VPDA+  + ++  + E
Sbjct: 491 LLSKMEDKGCVPDAIAYETIINAFFE 516



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 240/452 (53%), Gaps = 7/452 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N    + LI ++  +  I  A  V+ KI  L   P I     L+ GL   G+      F+
Sbjct: 83  NYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFH 142

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + +V  G+  D V+YG LI+  C  G    AL L  ++  +   P VV+Y  +I GLC +
Sbjct: 143 DRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  ++  M E  V PN+ TY +L+ G+C V  +++A    +EM+  N+ PNV TF
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLCK G++R A +    M K GV P++F YN L+DG+       +A ++ + M +
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++ DV +Y+++I GL  +  L+ A  L + M  E ++ +VV Y+SLIDG CK G +  
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL    +M ++G  PNV+T++SLID  CK+  +D A+ L  ++  + +  ++  +  L+D
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL KDG + +  ++++++L       V T S +I+GL K      AL    +  DK    
Sbjct: 443 GLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG--- 499

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            C P+ + Y  II A        KA KL  +M
Sbjct: 500 -CVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 262/526 (49%), Gaps = 27/526 (5%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLN 92
           FN +  +  P   P +  F  ++ +  +  H    + +++++E L  IQ+     N L+N
Sbjct: 37  FNRMLRMRPP---PPIIKFGKILGSLVKTKHYPIVIHLFQRME-LHGIQSNYITLNILIN 92

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
                 + +S +  + +++  G   D++TY  LI   C  G V ++LN  D ++ +GI+ 
Sbjct: 93  SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V Y  LI+GLC   +   A  + R +      P++  YN ++DG CK   V  A + Y
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM    + PNVVT+  L+ G C VG+L  A      M    V PN+  +N L+DG CK 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA SL + M K  + PDVFTYN L+ G   V +   A+ +   M + G+  +V +Y
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           + +I G  K   +++A+ +   M  + V P+VV +SSLIDG CK+G I++A+    EM  
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           +   P+V+ +T+LID L K   + + + L K++ +  I  +++T + L+ GL K+GR+++
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A   F +   K      + + V Y+ +I  LC +    +A  L S M      PD   Y 
Sbjct: 453 AQKVFQDLLMKGH----NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYE 508

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           T++              LL +MI      D V        Y++NGD
Sbjct: 509 TIINAFFEKDMNDKAEKLLREMI------DCV-------DYKDNGD 541



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 221/441 (50%), Gaps = 13/441 (2%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ----ACNA 89
           +SVF  +  L    + P +  ++TLI      G ++E+L  + ++ V   I+    +   
Sbjct: 104 FSVFAKILKL---GYQPDIITYTTLIRGLCLNGQVKESLNFHDRL-VSQGIKLDHVSYGT 159

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+NGL K G+         ++       DVV Y  +ID  C    V  A +L+ EM +K 
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKR 219

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P VV YT LI+G C   ++ +A  +   M    V PN+ T+N L+DG CK   +  A 
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAK 279

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+   + P+V T+  LMDG   V E   A N F  MA+ GV  ++  Y+ +I G 
Sbjct: 280 SLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGL 339

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            K   L EAM L   M    + PDV  Y+ LI GLC  G++  A   + +M+  G   NV
Sbjct: 340 SKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNV 399

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TY SLID  CK   ++KA+++  ++ ++G++ N+ T++ L+DG CK G +  A  ++ +
Sbjct: 400 ITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQD 459

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK--- 446
           +++K    DVV ++ +I+GL K+    E L L  +M +    P      ++I+  F+   
Sbjct: 460 LLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDM 519

Query: 447 NGRISNALNFFLEKTDKTDGG 467
           N +    L   ++  D  D G
Sbjct: 520 NDKAEKLLREMIDCVDYKDNG 540



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ F+ M+     P ++ +  ++  L           +F+ M   G+  N  T N L++
Sbjct: 33  AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            YC +  +N A   + ++L    QP+++T+  L+ GLC  G+++ + NF   +   G+  
Sbjct: 93  SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   Y  LI+G CK G    A+ L  ++E     PDV  YN +I GLC    +  A  L 
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M+++ +  NVVTY SLI G+C  G ++KA  + ++M  K V PNV TF++L+DG CK 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  L   M+ + + PDV  + AL+DG        +   ++  M +  +T  V + 
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S +I GL K   +  A++ F    ++       P+ V Y+++I  LC  G+I  A K   
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNEN----VIPDVVAYSSLIDGLCKSGRINSALKYVD 388

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M      P+  TYT+++  L ++ ++   + LL  +   GI  +     ++V G  ++G
Sbjct: 389 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448

Query: 558 DLKSA 562
            L  A
Sbjct: 449 RLTDA 453



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 4/335 (1%)

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A + F  M +    P I  +  ++    K  +    + L   ME   I  +  T NI
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI   C + Q+  A  +  K+ K G   +++TY +LI G C  G ++++L+   ++  +G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           ++ + V++ +LI+G CK G    A+ L  ++  +   PDVV++  +IDGL KD  +++  
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            LY EM E ++ P+V T +SLI+G    G++  A     E   K      +PN   +  +
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN----VNPNVCTFNTL 265

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC +G++ +A  L + M  + + PD  TY  ++ G    K       +   M +MG+
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             D     VM+ G  +   L  A    E ++   +
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 4/220 (1%)

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++  A+   ++M      P ++ F  ++    K  +    + L+  M +  +  + +   
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI+       +     ++ ++L+    P + T ++LI GL  NG++  +LNF     D+
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFH----DR 144

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                   +HV Y  +I  LC  GQ   A +L   +  +  RPD   Y T++ GL + K 
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + D   L  +M +  + P+ V    ++ G+   G L  AF
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAF 244


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 241/495 (48%), Gaps = 22/495 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ L+  + ++G ++EA  V     +  VLP +   N L+ GL K GK D  +   
Sbjct: 281 NRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    L+ DVVTY  LI+ C      +K   L D+M  KG++P  V Y +++     E
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM  A +  R M E G  P+  T+N L++GYCK   ++ A     EM    L+ N VT 
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC   +L  A       +K G F +   Y  LI G+ K G   EAM L  EM++
Sbjct: 461 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EI P + TYN +I GLC  G+ + +   L ++ + G++ +  TYN++I GYC+EG +EK
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEK 580

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M +K  +P++ T + L+ G C  G +D A+ L+   + K    D V +  +I 
Sbjct: 581 AFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIIS 640

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKT 464
           GL K+   +E   L  EM E K+ P  +T ++++  L   GR+  A  F    +E+    
Sbjct: 641 GLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQ 700

Query: 465 DGGYC----------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           D                     PN V ++  I  LC  G+   A  +  +     +    
Sbjct: 701 DQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK 760

Query: 509 CTYTTMLRGLLRAKR 523
            TY +++ GL++ ++
Sbjct: 761 STYISLMEGLIKRRK 775



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 267/548 (48%), Gaps = 22/548 (4%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNG 93
           S F  + SL +      +  T I A+        A  ++ +++ L   P +  CN L+N 
Sbjct: 130 SPFKKVQSLRV------ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINA 183

Query: 94  LIKKGKFDSVW---EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L++     SV+     + +++  G+  +  T+ +LI  CC +  + +A+ L  +M D   
Sbjct: 184 LVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSC 243

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P  V Y  ++  LC + K+ EA  +   M+  G++PN  T+N L+ GYCK+  +  A +
Sbjct: 244 FPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQ 303

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
               M  +N+ P+V T+ +L+ GLCK G++  A      M    + P++  YN LI+G  
Sbjct: 304 VIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCF 363

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
              +  +   L  +ME   + P+  TYN+++K     G+++ A   L+KM + G   + V
Sbjct: 364 DCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 423

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N+LI+GYCK G + +A  +  +M+ KG++ N VT ++++   C    +D A  L +  
Sbjct: 424 TFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 483

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             +    D V +  LI G  KDG   E ++L+ EM E +I PS+ T +++I GL  +G+ 
Sbjct: 484 SKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKT 543

Query: 451 SNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             +   LN  LE           P+   Y  II   C +GQ+ KA +  + M   + +PD
Sbjct: 544 DQSIDKLNELLESG-------LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPD 596

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T   +LRGL     +   + L    I  G   DAV    ++ G  +    + AF    
Sbjct: 597 LFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLA 656

Query: 568 FLKESRIG 575
            ++E ++G
Sbjct: 657 EMEEKKLG 664



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 252/501 (50%), Gaps = 7/501 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N + F+ LI        + EA+ +  K++     P   + N +L+ L KKGK +   +
Sbjct: 209 KVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARD 268

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M   GL+ +  T+ +L+   C  G + +A  + D M    + P V  Y +LI GLC
Sbjct: 269 LLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLC 328

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + K+ EA  +   M    ++P++ TYN L++G    +   +  E   +M    ++PN V
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ V++    K G++  AGN    M + G  P+   +N LI+G+CKAG L EA  +  EM
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  +  +  T N ++  LCG  +L+ A  LL    K G   + V+Y +LI GY K+G  
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+ +  +M EK + P+++T++++I G C +G  D ++    E++   LVPD   +  +
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I G  ++G +++  + + +M++    P +FT + L+ GL   G +  AL  F     K  
Sbjct: 569 ILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGK 628

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               + + V Y  II  LC + +  +A  L ++M    L PD  TY  +L  L  A RM 
Sbjct: 629 ----AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMK 684

Query: 526 DVMMLLADMIKMGIVPDAVIN 546
           +    ++ +++ G + D  I+
Sbjct: 685 EAEEFMSRIVEQGKLQDQTIS 705


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 261/494 (52%), Gaps = 8/494 (1%)

Query: 64  EMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           E+  +++A+ ++ ++   + LP++   + L   +I    + +V   + EM + G+     
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
              ++ +  C +  +  A ++    +  GI   VV +  L+ GL  ENK+ +A  +F+ +
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 181 -RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
            RE    PN   Y  +M+G  K     + L     M   N +P+V T+ +++D LCK   
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L AA N    M +  + PNIF YN LIDG CK G   +  +L SEM    I+P+V T++I
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI GLC  G++E A+ +++ M ++G+  +++TY++++DGYC  G +++A  V + + +KG
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           ++PN+ ++S LI+G CK  N+  AM L+ E+  K L PD V ++ ++ GL + G + +  
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           +++ EML    TP +   S+L+ G FK G +  A+  F     K +      N   Y  +
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLF----SKLERNREDTNISFYTVV 454

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC + ++ +A  +F  + S  L PD  TY  M+ G  R     +V  +L  M   G 
Sbjct: 455 INGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGC 514

Query: 540 VPDAVINQVMVRGY 553
             + +   V+++G+
Sbjct: 515 PANNITYNVIMQGF 528



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 219/418 (52%), Gaps = 7/418 (1%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFD 101
           IP FN   F+TL+        + +A+ +++K+ V   I   N      ++NGL K+G  +
Sbjct: 128 IP-FNVVTFNTLLGGLFAENKVTDAVVLFKKL-VREKICEPNEVMYGTVMNGLSKRGHTE 185

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                   M       DV TY ++ID  C   ++  A+NL +EM  K I P +  Y  LI
Sbjct: 186 KTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLI 245

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC   +  + +++   M    + PN++T++ L+DG CK   V  A E    M+   ++
Sbjct: 246 DGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVE 305

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+++T+  +MDG C  G++  A   F  +   G+ PNIF Y+ LI+G+CK  NL +AM L
Sbjct: 306 PDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQL 365

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             E+ +  + PD  TY+ ++ GL  VG++  A+ +  +M + G   ++  +++L+ GY K
Sbjct: 366 FGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFK 425

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A+ + S++     + N+  ++ +I+G CK   +  A  ++ ++    L+PDV  
Sbjct: 426 YGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRT 485

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           +  +I G  ++G   E   + ++M +     +  T + ++ G F++ +IS  ++F  E
Sbjct: 486 YNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKE 543



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 215/426 (50%), Gaps = 5/426 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF  M+     P+V+ ++ L   + N        S+FR MR  G+  +    N + +
Sbjct: 46  AVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTN 105

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF- 256
            YC    ++ A       L   +  NVVTF  L+ GL    ++  A   F  + +  +  
Sbjct: 106 SYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE 165

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN  +Y  +++G  K G+  + +SL   ME+    PDV TY+I+I  LC    L+ A  L
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L +M ++ I  N+ TYNSLIDG CK G  EK  ++ S+M    + PNV TFS LIDG CK
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G ++ A  +   M+ K + PD++ ++A++DG    G +    R++  + +  I P++F+
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            S LI+G  K   ++ A+  F E + K       P+ V Y+ I+  L   G+I  A K+F
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKG----LKPDTVTYSTILHGLIEVGRIGDAKKIF 401

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M      PD C ++T+L G  +   + + M+L + + +     +     V++ G  +N
Sbjct: 402 DEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN 461

Query: 557 GDLKSA 562
             ++ A
Sbjct: 462 DRVREA 467



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 188/337 (55%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           ++  + P I   N+L++GL K G+++ V     EMV   +  +V T+ +LID  C +G V
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  +   MI+KG+EP ++ Y+ ++ G C   ++  A  +F  +R+ G+ PN+++Y+ L
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++GYCK  ++ +A++ + E+    L+P+ VT+  ++ GL +VG +  A   F  M + G 
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+I +++ L+ G+ K G + EAM L S++E+     ++  Y ++I GLC   ++  A  
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + +K+   G++ +V TYN +I G+C+EG  ++   +  +M + G   N +T++ ++ G  
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++  I   +    EM  +    D      LI+ L ++
Sbjct: 530 RSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 207/416 (49%), Gaps = 3/416 (0%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +F  L   +I + N  ++ T++   S+ GH E+ L + R +E     P ++  + +++ L
Sbjct: 154 LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K    D+      EM    +  ++ TY  LID  C  G   K   L  EM++  I P V
Sbjct: 214 CKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             ++ILI GLC E K+ +A+ + R M E GV P++ TY+A+MDGYC    V+RA   ++ 
Sbjct: 274 HTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNV 333

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +    ++PN+ ++ +L++G CK   L  A   F  +++ G+ P+   Y+ ++ G  + G 
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +A  +  EM +   +PD+  ++ L+ G    G +E A  L  K+ +     N+  Y  
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I+G CK   + +A ++  ++   G+ P+V T++ +I G C+ G  D   G+  +M    
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
              + + +  ++ G  +   + E +   KEM     +    T   LI+ L +N  I
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSI 569



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 147/301 (48%), Gaps = 5/301 (1%)

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L +A+SL   M + +  P V  ++ L K +  +        L ++M   GI  +    N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           + + YC    ++ A SV     + G+  NVVTF++L+ G      +  A+ L+ ++V + 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 395 LV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           +  P+ V++  +++GLSK G+ ++TL L + M +    P V T S +I  L K+  +  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           +N   E   K       PN   Y ++I  LC  GQ  K   L S+M + N+ P+  T++ 
Sbjct: 223 INLLNEMKQKN----IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++ GL +  ++ D   ++  MI+ G+ PD +    ++ GY   G +  A R    L++  
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 574 I 574
           I
Sbjct: 339 I 339



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N S ++ +I    +   + EA  ++ K   I ++P ++  N ++ G  ++G FD V    
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G  A+ +TY V++        + + ++   EM  +G         +LI+ L   
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566

Query: 168 NKMVE 172
             +V+
Sbjct: 567 PSIVD 571


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/448 (31%), Positives = 221/448 (49%), Gaps = 40/448 (8%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           CN LL+  ++K K    ++ ++   LCGL + D +TY  LI+  C   D  +A  L DEM
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNH-LCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 59

Query: 146 IDKGI----------------------------------EPTVVIYTILIHGLCNENKMV 171
             +GI                                   P+V+ YTIL+  LC   ++ 
Sbjct: 60  EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARIS 119

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +   M E G  PN+ TYN L++G+CK+ +++ A+  +++ML ++  P+V T+ +L+
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG CK    +        M K+G  PN   YN L+D   K+G   +A +L   M + +  
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P  FT+N++I   C VGQL+ A  L Q M   G L ++ TYN +I G C+   ++ A  +
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +MTE G  P+VVT++S++ G CKA  +D A  +Y  +       DVV  + LIDGL K
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + +  +L +EM      P V   + LIHG  K  ++  +L FF E  DK     C P
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG----CVP 415

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDM 499
             + Y+ +I  LC   ++     L   M
Sbjct: 416 TVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/429 (33%), Positives = 217/429 (50%), Gaps = 7/429 (1%)

Query: 29  RKPHHVCYSVF-NALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAI 84
           +K     Y +F N L  L  P  +   +STLI  F +    ++A  +  ++E   ++P  
Sbjct: 11  KKKAQEAYDLFKNHLCGLCSP--DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHN 68

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              N ++ GL   G+ DS    Y +M        V+TY +L+D  C    +  A  + ++
Sbjct: 69  AVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDASLILED 127

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI+ G  P VV Y  LI+G C    M EA  +F  M E    P+++TYN L+DGYCK   
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                +   EM+ +  +PN +T+  LMD L K G+   A N    M +    P+ F +N 
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 247

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +ID  CK G L  A  L   M      PD++TYNI+I G C   +++ A  LL++M + G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              +VVTYNS++ G CK   +++A  V   +   G   +VVT S+LIDG CK+  +D A 
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EM      PDVV +T LI G  K   + ++L  + EML+    P+V T S +I  L
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427

Query: 445 FKNGRISNA 453
            K+ R+ + 
Sbjct: 428 CKSARVRDG 436



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 204/395 (51%), Gaps = 4/395 (1%)

Query: 37  SVFNALNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLN 92
             +  L+ +E     P  +V++T+I    + G ++ AL  YR ++    P++     L++
Sbjct: 51  QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVD 110

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L K  +        E+M+  G   +VVTY  LI+  C  G++ +A+ LF++M++    P
Sbjct: 111 ALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 170

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V  Y ILI G C + +  +   + + M + G  PN  TYN LMD   K      A    
Sbjct: 171 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 230

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             ML  + +P+  TF +++D  CKVG+L  A   F  M   G  P+I+ YN +I G C+A
Sbjct: 231 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 290

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + +A  L   M +    PDV TYN ++ GLC   Q++ A  + + +   G   +VVT 
Sbjct: 291 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 350

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           ++LIDG CK   ++ A  +  +M   G  P+VV ++ LI G CKA  +D ++  ++EM+ 
Sbjct: 351 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 410

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           K  VP V+ ++ +ID L K   +++   L K MLE
Sbjct: 411 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 204/405 (50%), Gaps = 7/405 (1%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           L+     + K  EA  +F++   CG+  P+  TY+ L++G+CK  D  +A     EM   
Sbjct: 4   LLSAFVRKKKAQEAYDLFKN-HLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR 62

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            + P+   +  ++ GLC  G + +A   +  M +    P++  Y  L+D  CK+  + +A
Sbjct: 63  GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSARISDA 121

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +  +M +   +P+V TYN LI G C +G ++ A  L  +M +     +V TYN LIDG
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YCK+   +    +  +M + G EPN +T+++L+D   K+G    A  L   M+ +   P 
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              F  +ID   K G +     L++ M +    P ++T + +I G  +  RI +A    L
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL-L 300

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E+   T+ G C P+ V Y +I+  LC   Q+ +A +++  +R+     D  T +T++ GL
Sbjct: 301 ERM--TEAG-CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +++R+ D   LL +M + G  PD V   +++ G+ +   L  + 
Sbjct: 358 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 161/316 (50%), Gaps = 9/316 (2%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   Y+ LI+G CKA +  +A  L  EMEK  I P    YN +IKGLC  G+++ A   
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            + M +     +V+TY  L+D  CK   +  A  +   M E G  PNVVT+++LI+G CK
Sbjct: 91  YRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN+D A+ L+ +M+  S  PDV  +  LIDG  K    ++  +L +EM++    P+  T
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 437 VSSLIHGLFKNGRISNALNF--FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            ++L+  L K+G+  +A N    + + D      C P+H  +  +I   C  GQ+  A +
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYE 263

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M      PD  TY  M+ G  RA R+ D   LL  M + G  PD V    +V G  
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323

Query: 555 ENGDLKSAFRCSEFLK 570
           +   +  A+   E L+
Sbjct: 324 KASQVDEAYEVYEVLR 339



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 3/313 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  F ++G+++EA+ ++ ++      P +   N L++G  K+ +     +  
Sbjct: 136 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 195

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  G   + +TY  L+D     G  + A NL   M+ +  +P+   + ++I   C  
Sbjct: 196 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 255

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +F+ M + G +P++YTYN ++ G C+   ++ A +    M      P+VVT+
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 315

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ GLCK  ++  A   +  +   G F ++   + LIDG CK+  L +A  L  EME+
Sbjct: 316 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +PDV  Y ILI G C   QL+ +     +M  +G +  V+TY+ +ID  CK   +  
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 435

Query: 348 ALSVCSQMTEKGV 360
              +   M E+GV
Sbjct: 436 GCMLLKTMLERGV 448


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/591 (29%), Positives = 293/591 (49%), Gaps = 14/591 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           +  ++ ++ LY+ A  +I  + +   +  K        F+ L  +   + N   +S+L++
Sbjct: 109 LLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLM 168

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           + +++     A   YR++E    +  +     ++N L K G  ++   F  +++  G V 
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL 228

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESM 176
           D      L+   C   ++  AL +FD M  +    P  V Y+ILIHGLC   ++ EA  +
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M E G  P+  TY  L+   C    +++A   + EM+    +PNV T+ VL+DGLC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G++  A      M K  +FP++  YN LI+G+CK G +  A  L + MEK    P+V T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N L++GLC VG+   A  LL++M   G+  ++V+YN LIDG C+EG M  A  + S M 
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
              +EP+ +TF+++I+  CK G  D A      M+ K +  D V  T LIDG+ K G  +
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + L + + +++ +I  +  +++ ++  L K  ++   L   L K +K       P+ V Y
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM-LGKINKLG---LVPSVVTY 584

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++  L   G I  + ++   M+     P+   YT ++ GL +  R+ +   LL+ M  
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE------SRIGSSETEG 581
            G+ P+ V   VMV+GY  NG L  A      + E       RI SS  +G
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 253/481 (52%), Gaps = 8/481 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            +  + ++L++ F    ++ +AL V+    +++   P   + + L++GL + G+ +  + 
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++M   G      TY VLI   C +G + KA NLFDEMI +G +P V  YT+LI GLC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + K+ EA  + R M +  + P++ TYNAL++GYCK   V  A E    M     +PNV 
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TF  LM+GLC+VG+   A +    M   G+ P+I  YN LIDG C+ G++  A  L S M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             F+I PD  T+  +I   C  G+ + A   L  M ++GI  + VT  +LIDG CK G  
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL +   + +  +     + + ++D   K   +   + +  ++    LVP VV +T L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DGL + G++  + R+ + M  +   P+V+  + +I+GL + GR+  A       +   D
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL---SAMQD 644

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G  SPNHV Y  +++    +G++ +A +    M       ++  Y+++L+G + +++ +
Sbjct: 645 SGV-SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703

Query: 526 D 526
           D
Sbjct: 704 D 704



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 197/519 (37%), Gaps = 131/519 (25%)

Query: 39  FNALNSLEIP---KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           FN  + + IP   K N   ++ LI      G IEEA  V RK+    + P++   NAL+N
Sbjct: 321 FNLFDEM-IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  K G+    +E    M       +V T+  L++  C  G   KA++L   M+D G+ P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA------------------ 194
            +V Y +LI GLC E  M  A  +  SM    + P+  T+ A                  
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499

Query: 195 -----------------LMDGYCKVADVNRALEFYHEMLH-------HNLQ--------- 221
                            L+DG CKV     AL     ++        H+L          
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559

Query: 222 -------------------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
                              P+VVT+  L+DGL + G++  +      M   G  PN++ Y
Sbjct: 560 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             +I+G C+ G + EA  L S M+   +SP+  TY +++KG    G+L+ A   ++ M +
Sbjct: 620 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679

Query: 323 EGILANVVTYNSLIDGY------------------------------------------- 339
            G   N   Y+SL+ G+                                           
Sbjct: 680 RGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCIS 739

Query: 340 ----------CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
                     CKEG  +++  +   + E+GV         +++  C        M L T 
Sbjct: 740 GLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITL 798

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           ++    VP    F  +I GL K+G+ +    L  E+L +
Sbjct: 799 VLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTS 837


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 265/550 (48%), Gaps = 49/550 (8%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEV--LP-AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           +I  F  M   + A+ +YRK+E+  +P  I + N L+       K       + ++   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 115 LVADVVTYGVLIDCCCGQGDVMKAL----------NLFDEMIDKGIEPTVVIYTILIHGL 164
              DVVT+  L+   C +  + +AL          +LFD+M++ G+ P V+ +  LI+GL
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E +++EA ++   M   G+  ++ TY  +++G CK+ D   AL    +M   +++P+V
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +  ++D LCK G    A   F  M + G+ PN+F YNC+IDG C  G   +A  L  +
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M + EI+PDV T+N LI      G+L  AE L  +M    I  + VTYNS+I G+CK   
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A      M +    P+VVTF+++ID  C+A  +D  M L  E+  + LV +   +  
Sbjct: 412 FDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL------ 458
           LI G  +  N+     L++EM+   + P   T + L++G  +N ++  AL  F       
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 459 ------------------EKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQILKAS 493
                              K D+    +CS       P+   Y  +I   C    I  A+
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF  M+ +   PDN TY T++RG L+A  +   + L+++M   G   DA   + MV   
Sbjct: 588 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADL 646

Query: 554 QENGDLKSAF 563
             +G L  +F
Sbjct: 647 ITDGRLDKSF 656



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 222/447 (49%), Gaps = 18/447 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ FD M+      T V    +I      N+   A S++R M    +  N+Y++N L+ 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRA-------AGNFF 247
            +C    ++ +L  + ++     QP+VVTF  L+ GLC   ++ E  A        G+ F
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLF 209

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G+ P +  +N LI+G C  G + EA +L ++M    +  DV TY  ++ G+C +
Sbjct: 210 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 269

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G  + A  LL KM +  I  +VV Y+++ID  CK+G    A  + S+M EKG+ PNV T+
Sbjct: 270 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 329

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + +IDG C  G    A  L  +M+ + + PDV+ F ALI    K+G + E  +L  EML 
Sbjct: 330 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 389

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I P   T +S+I+G  K+ R  +A + F            SP+ V +  II   C   
Sbjct: 390 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIIDVYCRAK 441

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++ +  +L  ++    L  +  TY T++ G      +     L  +MI  G+ PD +   
Sbjct: 442 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 501

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRI 574
           +++ G+ EN  L+ A    E ++ S+I
Sbjct: 502 ILLYGFCENEKLEEALELFEVIQMSKI 528


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/515 (31%), Positives = 256/515 (49%), Gaps = 8/515 (1%)

Query: 69  EEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           E AL  + K+ V   LP  +    L   ++K   + +     + +   G+  DV T  ++
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+C C     +   ++   M   G++PTVV +  LI+GLC E  +  A     S+ + G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV-TFGVLMDGLCKVGELRAAG 244
             N YTY A+++G CK  D + A+ +  ++   N   +VV  +  +MD LCK G +  A 
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           N F  M   G+ P++  YN LI G C  G   EA +L   M +  I P+V T+N+L+   
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G +  A+ ++  M   G+  +VVTYNS+I G+C    M  A+ V   M  KG  PN+
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNL 352

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+SSLI G CK  NI+ A+ L  EMV   L PDVV ++ LI G  K G  +    L+  
Sbjct: 353 VTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCT 412

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M E    P++ T + ++ GLFK    S A++ F E            N V+Y  ++  +C
Sbjct: 413 MHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN----LELNVVIYNIVLDGMC 468

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A +LFS + S  ++ D   YTTM++GL +   + D   LL  M + G +P+  
Sbjct: 469 SFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEF 528

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
              V VRG  +  D+  + +    +K   + +  T
Sbjct: 529 TYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADAT 563



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC---NALLNGLIKKGKFDSVWE 105
           +P+V  F+TLI      G++  A      +E +          A++NGL K G       
Sbjct: 138 DPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAIL 197

Query: 106 FYEEMVLCGLVADVV-TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + E++       DVV  Y  ++D  C  G V +ALNLF  M  KGI+P +V Y  LIHGL
Sbjct: 198 YLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGL 257

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           CN  +  EA ++  +M   G++PN+ T+N L+D +CK   ++RA      M+H  ++P+V
Sbjct: 258 CNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDV 317

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  ++ G C + ++  A   F  M   G  PN+  Y+ LI G CK  N+ +A+ L  E
Sbjct: 318 VTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGE 377

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    ++PDV T++ LI G C  G+ E A+ L   M++     N+ T   ++DG  K   
Sbjct: 378 MVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQF 437

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
             +A+S+  +M +  +E NVV ++ ++DG C  G ++ A  L++ +  K +  DVV +T 
Sbjct: 438 HSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTT 497

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +I GL K+G + +   L  +M E    P+ FT +  + GL +   IS +  + L
Sbjct: 498 MIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLL 551



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 223/479 (46%), Gaps = 13/479 (2%)

Query: 52  PSVFSTLIIAFSEMGHIEEALW------VYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           P V+ TL I  + + H+   ++      V  KI V P +     L+NGL  +G       
Sbjct: 104 PDVY-TLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI-YTILIHGL 164
           F + +   G  ++  TYG +I+  C  GD   A+   +++  +  +  VVI Y+ ++  L
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C +  + EA ++F  M   G+ P+L  YN+L+ G C       A      M+   + PNV
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF VL+D  CK G +  A      M   GV P++  YN +I GHC    + +A+ +   
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M      P++ TY+ LI G C    +  A  LL +M   G+  +VVT+++LI G+CK G 
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            E A  +   M E    PN+ T + ++DG  K      A+ L+ EM   +L  +VV++  
Sbjct: 403 PEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNI 462

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++DG+   G + +   L+  +    I   V   +++I GL K G + +A N  +    K 
Sbjct: 463 VLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLM----KM 518

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           +   C PN   Y   ++ L     I +++K    M+   L  D  T T +L     A +
Sbjct: 519 EENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSAD-ATTTELLISYFSANK 576



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 162/387 (41%), Gaps = 50/387 (12%)

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           H     N       +D +  +    AA +FF  M      P    +  L     K  +  
Sbjct: 29  HFRSSSNFTNRAQFLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYA 88

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
             +SL   +    I PDV+T  I+I  LC +        +L  M+K G+   VVT+ +LI
Sbjct: 89  TTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLI 148

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA-------------- 382
           +G C EG++ +A      + + G + N  T+ ++I+G CKAG+                 
Sbjct: 149 NGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCD 208

Query: 383 ----------------------AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
                                 A+ L++ M  K + PD+V + +LI GL   G  KE   
Sbjct: 209 LDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATT 268

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY-----CSPNHVL 475
           L   M+   I P+V T + L+    K+G IS A         KT  G+       P+ V 
Sbjct: 269 LLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRA---------KTIMGFMVHVGVEPDVVT 319

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y ++I   C   Q+  A K+F  M      P+  TY++++ G  + K +   + LL +M+
Sbjct: 320 YNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMV 379

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSA 562
             G+ PD V    ++ G+ + G  ++A
Sbjct: 380 NSGLNPDVVTWSTLIGGFCKAGKPEAA 406


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 238/474 (50%), Gaps = 12/474 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEV-----LPAIQACNALLNGLIKKGKFDSVW 104
           PS+  ++TL+ +F + G  ++   + +++E      LP     N ++ GL +KG  +   
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E  E M L    A   TY  LI     +G V KA +L  EM ++GI PTVV Y  +IHGL
Sbjct: 295 EMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGL 353

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++  A+  F  MR  G+ P++ TYN+L++GYCK   +  AL  + ++ H  L P V
Sbjct: 354 LQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTV 413

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+ +L+DG C++G+L  A      M + G  P++  Y  L+ G   A +L  A     E
Sbjct: 414 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDE 473

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + PD F YN  I+    +G +  A  L + M  EGI ++ VTYN LIDG CK G+
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A  +  +M   G++P+ +T++ LI   C+ G +  A   + +M+   L P  V +T 
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I    + GN+      +++MLE  + P+  T + LIH L + GR   A   F E  ++ 
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                 PN   Y  +I   C +G    A + + +M  + + PD  T+  + +G 
Sbjct: 654 ----LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 266/563 (47%), Gaps = 57/563 (10%)

Query: 51  NPSVFSTLII-AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            P   STL + AF EM              V P ++ CN +L  L    ++D +   + E
Sbjct: 178 TPDTCSTLCLSAFHEMA----------SHGVAPDVKDCNRVLRVLSDAARWDDICAVHAE 227

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE--PTVVIYTILIHGLCNE 167
           M+  G+   +VTY  L+D    +G   K   L  EM  +G    P  V + ++I GL  +
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  M   MR      + +TYN L+ G      V +A +   EM +  + P VVT+
Sbjct: 288 GDLEEAAEMVEGMRLSKKASS-FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTY 346

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ GL + G++ AA   FV M   G+ P++  YN L++G+CKAG+L EA+ L  ++  
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++P V TYNILI G C +G LE A  L ++M ++G L +V TY  L+ G      +  
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466

Query: 348 ALSVCSQMTEKGVEP-----------------------------------NVVTFSSLID 372
           A     +M  KG++P                                   + VT++ LID
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK GN++ A  L  +MV   L PD + +T LI    + G ++E  + +K+M+   + P
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S  T +  IH   + G + +A  +F +  ++       PN + Y  +I ALC  G+   A
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG----VEPNEITYNVLIHALCRTGRTQLA 642

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + F +M    L P+  TYT ++ G  +     D M    +M + GI PD + ++ + +G
Sbjct: 643 YRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702

Query: 553 YQENGDLKSAFRCSEFLKESRIG 575
           + E G +  A    E+L+ + +G
Sbjct: 703 FDE-GHMNHAI---EYLENAVLG 721



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 151/332 (45%), Gaps = 7/332 (2%)

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  MA  GV P++   N ++     A    +  ++ +EM +  I P + TYN L+     
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 307 VGQLEGAEGLLQKMYKEG--ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
            G+ +    LL++M   G   L N VT+N +I G  ++GD+E+A  +   M     + + 
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASS 308

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            T++ LI G    G +  A  L  EM  + ++P VV + A+I GL + G ++     + E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    + P V T +SL++G  K G +  AL  F    D    G  +P  + Y  +I   C
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLF---GDLRHAGL-APTVLTYNILIDGYC 424

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G + +A +L  +M      PD CTYT +++G   A  +        +M+  G+ PD  
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
                +R     G +  AFR  E +    I S
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISS 516


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/463 (32%), Positives = 247/463 (53%), Gaps = 5/463 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V +F   M+       ++ +  ++D          A++L   +  KGI+P ++   IL
Sbjct: 42  DAVSQF-NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  ++    S+   + + G  P+  T N L+ G C    V +AL F+ ++L    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           Q N V++G L++G+CK+G+ RAA      +      PN+ +Y+ +ID  CK   + EA  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L SEM    IS DV TY+ LI G C  G+L+ A GLL +M  + I  NV TYN L+D  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A SV + M +  V+P+V+T+S+L+DG      +  A  ++  M +  + PDV 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T LI+G  K+  + E L L+KEM +  + P + T SSLI GL K+GRI    +   E 
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D+        N + Y+++I  LC +G + +A  LF+ M+   +RP+  T+T +L GL +
Sbjct: 401 HDRGQ----PANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             R+ D   +  D++  G   +     VM+ G+ + G L+ A 
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 266/514 (51%), Gaps = 11/514 (2%)

Query: 44  SLEIPKFNP----SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK 96
           SL IP F+     S  S        + ++++A+  + ++  +   P I   N +L+   K
Sbjct: 12  SLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAK 71

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
              + +       + L G+  D++T  +LI+C C  G +    ++  +++ +G  P  V 
Sbjct: 72  MKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVT 131

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
              LI GLC + ++ +A      +   G   N  +Y  L++G CK+ D   A++   ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID 191

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               +PNVV +  ++D LCK   +  A   F  M   G+  ++  Y+ LI G C  G L 
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ L +EM    I+P+V+TYNIL+  LC  G+++ A+ +L  M K  +  +V+TY++L+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY    +++KA  V + M+  GV P+V T++ LI+G CK   +D A+ L+ EM  K++V
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +++LIDGL K G +     L  EM +     +V T SSLI GL KNG +  A+  
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F +  D+       PN   +  ++  LC  G++  A ++F D+ +     +  TY  M+ 
Sbjct: 432 FNKMKDQG----IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMID 487

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           G  +   + + + +L+ M   G +PDAV  ++++
Sbjct: 488 GHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/452 (32%), Positives = 239/452 (52%), Gaps = 21/452 (4%)

Query: 43  NSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK 97
           + LE+    P + +   LI  F  MG I     V  KI      P     N L+ GL  K
Sbjct: 83  HRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLK 142

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+      F+++++  G   + V+YG LI+  C  GD   A+ L  ++  +  +P VV+Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMY 202

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I  LC    + EA  +F  M   G+  ++ TY+ L+ G+C    +  A+   +EM+ 
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC------K 271
             + PNV T+ +L+D LCK G+++ A +    M K  V P++  Y+ L+DG+       K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A ++F AMSL        ++PDV TY ILI G C    ++ A  L ++M+++ ++  +VT
Sbjct: 323 AQHVFNAMSLMG------VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLIDG CK G +     +  +M ++G   NV+T+SSLIDG CK G++D A+ L+ +M 
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P+   FT L+DGL K G +K+   +++++L      +V+T + +I G  K G + 
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            AL        K +   C P+ V +  II AL
Sbjct: 497 EALTML----SKMEDNGCIPDAVTFEIIIIAL 524



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 5/286 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
           LN + +   NP+V++   L+ A  + G ++EA   L V  K  V P +   + L++G   
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             +       +  M L G+  DV TY +LI+  C    V +ALNLF EM  K + P +V 
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ LI GLC   ++     +   M + G   N+ TY++L+DG CK   ++RA+  +++M 
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              ++PN  TF +L+DGLCK G L+ A   F  +   G   N++ YN +IDGHCK G L 
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           EA+++ S+ME     PD  T+ I+I  L    +  G  G  +K+++
Sbjct: 497 EALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWE 542



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 2/261 (0%)

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A++L   +  KGI+P +    ILI+  C+  ++    S+   + + G  P+  T+  L++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            G C    VN+AL F+ ++L    Q N V++G L++G+CK+G+ RAA      +      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            ++ +YN +ID  CK   + +A  L  EM    IS DV TYN LI G C VG+L+ A GLL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGD--MEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             KM  + I  NV TYN L+D  CKEG   ++++LS+ S+M + G + N VTF  +I    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 376  KAGNIDAAMGLYTEMVIKSLV 396
            +    D    L  EM+ + L+
Sbjct: 1185 EKDENDKVEKLLHEMIARGLL 1205



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 2/256 (0%)

Query: 173  AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
            A S+   +   G+ P+L+T N L++ +C +  +        ++L     P+ +TF  L++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 233  GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            GLC  G++  A +F   +   G   N   Y  LI+G CK G+   A+ L  +++     P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 293  DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
            DV  YN +I  LC    +  A GL  +M  +GI A+VVTYN+LI G+C  G +++A+ + 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 353  SQMTEKGVEPNVVTFSSLIDGQCKAGN--IDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            ++M  K + PNV T++ L+D  CK G   +D ++ + ++M       + V F  +I  L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 411  KDGNMKETLRLYKEML 426
            +     +  +L  EM+
Sbjct: 1185 EKDENDKVEKLLHEMI 1200



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 15/299 (5%)

Query: 214  EMLHHNLQPNVVTFGVLM--DGLCKVGE-LRAAGNFFVHMAKF----------GVFPNIF 260
            E +H   +  VV  G+ M   G+  VG  +R   N   H +            G+ P++F
Sbjct: 903  EAIHVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLF 962

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
              N LI+  C  G +    S+ +++ K    PD  T+  LI GLC  GQ+  A     K+
Sbjct: 963  TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              +G   N V+Y +LI+G CK GD   A+ +  ++  +  +P+VV ++++ID  CK   +
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
              A GL+ EM +K +  DVV +  LI G    G +KE + L  +M+   I P+V T + L
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNIL 1142

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            +  L K G+  + L+  L    K +   C  N V +  II AL    +  K  KL  +M
Sbjct: 1143 VDALCKEGK--DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 2/263 (0%)

Query: 100  FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            + +       + L G+  D+ T  +LI+C C  G +    ++  +++ +G  P  + +T 
Sbjct: 942  YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001

Query: 160  LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
            LI+GLC + ++ +A      +   G   N  +Y  L++G CK+ D   A++   ++    
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 220  LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             +P+VV +  ++D LCK   +  A   F  M   G+  ++  YN LI G C  G L EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 280  SLCSEMEKFEISPDVFTYNILIKGLCGVGQ--LEGAEGLLQKMYKEGILANVVTYNSLID 337
             L ++M    I+P+V TYNIL+  LC  G+  L+ +  +L KM   G  AN VT+  +I 
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 338  GYCKEGDMEKALSVCSQMTEKGV 360
               ++ + +K   +  +M  +G+
Sbjct: 1182 ALFEKDENDKVEKLLHEMIARGL 1204



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 5/279 (1%)

Query: 53   SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            SV + + I  + M H   A+ +  ++E   + P +   N L+N     G+    +    +
Sbjct: 927  SVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAK 986

Query: 110  MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            ++  G   D +T+  LI+  C +G V KAL+  D+++ +G +   V Y  LI+G+C    
Sbjct: 987  ILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGD 1046

Query: 170  MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
               A  + R +      P++  YN ++D  CK   V++A   + EM    +  +VVT+  
Sbjct: 1047 TRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNT 1106

Query: 230  LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN--LFEAMSLCSEMEK 287
            L+ G C VG+L+ A      M    + PN+  YN L+D  CK G   L E++S+ S+ME 
Sbjct: 1107 LIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMED 1166

Query: 288  FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
                 +  T+ I+I  L    + +  E LL +M   G+L
Sbjct: 1167 NGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 4/203 (1%)

Query: 348  ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
            A+S+  ++  KG++P++ T + LI+  C  G I     +  +++ +   PD + FT LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 408  GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            GL   G + + L  + ++L      +  +  +LI+G+ K G    A+        K DG 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLL----RKIDGR 1060

Query: 468  YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               P+ V+Y  II ALC    + KA  LF +M    +  D  TY T++ G     ++ + 
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 528  MMLLADMIKMGIVPDAVINQVMV 550
            + LL  M+   I P+     ++V
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILV 1143



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 4/181 (2%)

Query: 382  AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             A+ L   + +K + PD+     LI+     G +     +  ++L+    P   T ++LI
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 442  HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            +GL   G+++ AL+F     DK        N V Y  +I  +C  G    A KL   +  
Sbjct: 1004 NGLCLKGQVNKALHFH----DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 502  DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               +PD   Y T++  L + + +     L  +M   GI  D V    ++ G+   G LK 
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 562  A 562
            A
Sbjct: 1120 A 1120


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 256/519 (49%), Gaps = 15/519 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    +   ++ A  V++++    V P     N L++G +  GK+  V    
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM   GL  D  TYG L++  C  G   +A   FD MI KGI+P V IY ILIHG   +
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATK 356

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + E   +   M E G+ P+ + +N +   Y K A ++ A+  +++M    L P+VV F
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNF 416

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+D LCK+G +  A   F  M   GV PNIFV+N L+ G C      +A     EM  
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PDV  +N ++  LC  GQ+  A+ L+  M + G   +V++Y +LI G+C  G +++
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A      M   G++P+  T+++L+ G C+AG ID A G++ EM+   + P VV ++ ++ 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL       E   LY  M+ +    +++  + +++GL KN  +  A   F          
Sbjct: 597 GLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLF--------QS 648

Query: 468 YCSPNHVL----YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            CS +  L    +  +I AL   G+   A  LF+ + S  L PD  TY  +   L+    
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + +   L + M K G  P++ +   +VR     GD+  A
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 251/523 (47%), Gaps = 11/523 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRK----IEVLPAIQACNALLNGLIKKGKFDSVW 104
           + N  V + L+    +   + EA+ +  K    +   P + + N LL G   + + +   
Sbjct: 126 RVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEAL 185

Query: 105 EFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           E    M          +VV+Y  +I+    +G V KA NLF EM+D+GI+P VV YT +I
Sbjct: 186 ELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVI 245

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC    +  AE +F+ M + GV P+  TYN L+ GY  +      +    EM  H L+
Sbjct: 246 DGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLK 305

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+  T+G L++ LC  G  R A  FF  M + G+ PN+ +Y  LI G+   G L E   L
Sbjct: 306 PDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDL 365

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            + M +  +SPD   +NI+         ++ A  +  KM ++G+  +VV + +LID  CK
Sbjct: 366 LNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G ++ A+   +QM  +GV PN+  F+SL+ G C     + A   Y EM+ + + PDVV 
Sbjct: 426 LGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVF 485

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F  ++  L   G + +  RL   M      P V + ++LI G    GRI  A     +  
Sbjct: 486 FNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA----AKSL 541

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D        P+   Y  ++   C  G+I  A  +F +M  + + P   TY+T+L GL   
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +R  +   L  +MI  G   +  I  +++ G  +N  +  AF+
Sbjct: 602 RRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 223/488 (45%), Gaps = 43/488 (8%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA- 173
           +  D+ TY +LI C C  G +      F  ++  G     ++   L+ GLC+  ++ EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH-------------------- 213
           + + + M E G  P++ +YN L+ G+C       ALE  H                    
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 214 ------------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                             EM+   +QPNVVT+  ++DGLCK   +  A   F  M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YNCLI G+   G   E + +  EM    + PD +TY  L+  LC  G+   A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
               M ++GI  NV  Y  LI GY  +G + +   + + M E G+ P+   F+ +     
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ID AM ++ +M  + L PDVV F ALID L K G + + +  + +M+   + P++F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             +SL++GL    +   A  F+ E  ++       P+ V +  I+  LC  GQ++KA +L
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQG----IRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M     RPD  +YTT++ G     R+ +    L  M+ +G+ PD      ++ GY  
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 556 NGDLKSAF 563
            G +  A+
Sbjct: 566 AGRIDDAY 573



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 202/432 (46%), Gaps = 24/432 (5%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCN----ENKMVEAE---SMF-RSMRECG--VVP 187
           AL LFD ++      +++ +  L+  +       +   E+E   S+F R +REC   V P
Sbjct: 33  ALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           +L TY+ L+  +C++  +      +  +L    + N +    L+ GLC    LR A +  
Sbjct: 93  DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL 152

Query: 248 V-HMAKFGVFPNIFVYNCLIDGHC---KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
           +  M + G  P++  YN L+ G C   +A    E + + ++ +     P+V +Y  +I G
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVING 212

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
               GQ++ A  L  +M   GI  NVVTY ++IDG CK   +++A  V  QM +KGV+P+
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             T++ LI G    G     + +  EM    L PD   + +L++ L  +G  +E    + 
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRIS---NALNFFLEKTDKTDGGYCSPNHVLYAAII 480
            M+   I P+V     LIHG    G +S   + LN  +E          SP+H ++  I 
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG-------LSPDHHIFNIIF 385

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A      I +A  +F+ M+   L PD   +  ++  L +  R+ D ++    M+  G+ 
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 541 PDAVINQVMVRG 552
           P+  +   +V G
Sbjct: 446 PNIFVFNSLVYG 457



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 8/275 (2%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +++PD+ TY+ILI   C +G+LE        + K G   N +  N L+ G C    + +A
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 349 LSV-CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI---KSLVPDVVVFTA 404
           + +   +M E G  P+VV++++L+ G C     + A+ L   M     +S  P+VV +  
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G   +G + +   L+ EM++  I P+V T +++I GL K   +  A   F +  DK 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 P++  Y  +I      G+  +  ++  +M +  L+PD  TY ++L  L    R 
Sbjct: 269 ----VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +       MI+ GI P+  I  +++ GY   G L
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/378 (36%), Positives = 202/378 (53%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N++++ L K G+     +    M    +  D V Y  LI      G+V     L
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           FDEM  K I P  V YT +IHGLC   K+VEA  +F  M   G+ P+  TY AL+DGYCK
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             ++  A   +++M+   L PNVVT+  L+DGLCK GE+  A      M++ G+ PN+  
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G CK GN+ +A+ L  EM+     PD  TY  ++   C +G++  A  LL+ M 
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+   +VT+N L++G+C  G +E    +   M +KG+ PN  TF+SL+   C   N+ 
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           A + +Y  M  + +VPD   +  LI G  K  NMKE   L+KEM+E   + +  + +SLI
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679

Query: 442 HGLFKNGRISNALNFFLE 459
            G +K  +   A   F E
Sbjct: 680 KGFYKRKKFEEARKLFEE 697



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 245/475 (51%), Gaps = 21/475 (4%)

Query: 106 FYEEMVLCGLVAD-------VVTYGVLI--DCCC--------GQGDVMKALNLFDEMIDK 148
           F++ +V  GL+ +       ++ YGVL+  D C             +  A  +F E  + 
Sbjct: 187 FFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEV 246

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+    V Y I++H LC   K+ EA S+   M   G VP++ +Y+ ++DGYC+V  + + 
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKV 306

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+   E+    L+PN  T+  ++  LCK G +  A      M    +FP+  VY  LI G
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
             K+GN+     L  EM++ +I PD  TY  +I GLC  G++  A  L  +M  +G+  +
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            VTY +LIDGYCK G+M++A S+ +QM EKG+ PNVVT+++L+DG CK G +D A  L  
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K L P+V  + ALI+GL K GN+++ ++L +EM  A   P   T ++++    K G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            ++ A        DK       P  V +  ++   C  G +    +L   M    + P+ 
Sbjct: 547 EMAKAHELLRIMLDKG----LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            T+ ++++       M   + +   M   G+VPD     ++++G+ +  ++K A+
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 264/526 (50%), Gaps = 12/526 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV---W 104
           +P VF        E G + EA  ++ K+    VL ++ +CN  L  L     FD +   +
Sbjct: 180 HPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL--SNSFDGIRTAF 237

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + E    G+  + V+Y +++   C  G V +A +L  +M  +G  P VV Y++++ G 
Sbjct: 238 RVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGY 297

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   ++ +   +   ++  G+ PN YTYN+++   CK   V  A +    M +  + P+ 
Sbjct: 298 CQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +  L+ G  K G +      F  M +  + P+   Y  +I G C+AG + EA  L SE
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + PD  TY  LI G C  G+++ A  L  +M ++G+  NVVTY +L+DG CK G+
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  +  +M+EKG++PNV T+++LI+G CK GNI+ A+ L  EM +    PD + +T 
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++D   K G M +   L + ML+  + P++ T + L++G   +G + +         DK 
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN   + ++++  C    +    +++  M +  + PD  TY  +++G  +A+ M
Sbjct: 598 ----IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            +   L  +M++ G    A     +++G+ +    + A +  E ++
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR 699



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 200/380 (52%), Gaps = 3/380 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++++I    + G +   E+ L V +   + P       L++G  K G     ++
Sbjct: 319 KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM    +V D VTY  +I   C  G V++A  LF EM+ KG++P  V YT LI G C
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +M EA S+   M E G+ PN+ TY AL+DG CK  +V+ A E  HEM    LQPNV 
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCKVG +  A      M   G FP+   Y  ++D +CK G + +A  L   M
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + P + T+N+L+ G C  G LE  E L++ M  +GI+ N  T+NSL+  YC   +M
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
              + +   M  +GV P+  T++ LI G CKA N+  A  L+ EMV K        + +L
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSL 678

Query: 406 IDGLSKDGNMKETLRLYKEM 425
           I G  K    +E  +L++EM
Sbjct: 679 IKGFYKRKKFEEARKLFEEM 698



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 254/498 (51%), Gaps = 5/498 (1%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           Y ++ V     + N +L+ L + GK         +M   G V DVV+Y V++D  C    
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + K L L +E+  KG++P    Y  +I  LC   ++VEAE + R M+   + P+   Y  
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+ K  +V+   + + EM    + P+ VT+  ++ GLC+ G++  A   F  M   G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+   Y  LIDG+CKAG + EA SL ++M +  ++P+V TY  L+ GLC  G+++ A 
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M ++G+  NV TYN+LI+G CK G++E+A+ +  +M   G  P+ +T+++++D  
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +  A  L   M+ K L P +V F  L++G    G +++  RL K ML+  I P+ 
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SL+    K   I N +   +E           P+   Y  +I+  C    + +A  
Sbjct: 603 TTFNSLM----KQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWF 658

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M          +Y ++++G  + K+  +   L  +M   G + +  I  + V    
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNY 718

Query: 555 ENGDLKSAFR-CSEFLKE 571
           E G+ ++    C E +++
Sbjct: 719 EEGNWENTLELCDEAIEK 736



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 231/452 (51%), Gaps = 12/452 (2%)

Query: 134 DVMKALNLFDEMI-----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
           DV  + + F E +     D G  P  +++ +    L     ++EA  +F  +   GV+ +
Sbjct: 158 DVGNSFDRFTERLIYTYKDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVS 215

Query: 189 LYTYNALMDGYCKVAD-VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           + + N  +       D +  A   + E     +  N V++ +++  LC++G+++ A +  
Sbjct: 216 VDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLL 275

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           + M   G  P++  Y+ ++DG+C+   L + + L  E+++  + P+ +TYN +I  LC  
Sbjct: 276 IQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKT 335

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G++  AE +L+ M  + I  + V Y +LI G+ K G++     +  +M  K + P+ VT+
Sbjct: 336 GRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTY 395

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +S+I G C+AG +  A  L++EM+ K L PD V +TALIDG  K G MKE   L+ +M+E
Sbjct: 396 TSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE 455

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             +TP+V T ++L+ GL K G +  A     E ++K       PN   Y A+I  LC  G
Sbjct: 456 KGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG----LQPNVCTYNALINGLCKVG 511

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            I +A KL  +M      PD  TYTT++    +   M     LL  M+  G+ P  V   
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFN 571

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           V++ G+  +G L+   R  +++ +  I  + T
Sbjct: 572 VLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 178/367 (48%), Gaps = 6/367 (1%)

Query: 34  VCYSVFNALNSLEI-PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNA 89
           V Y +F+ +   +I P F    ++++I    + G + EA  ++ ++    + P      A
Sbjct: 375 VEYKLFDEMKRKKIVPDF--VTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++G  K G+    +  + +MV  GL  +VVTY  L+D  C  G+V  A  L  EM +KG
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++P V  Y  LI+GLC    + +A  +   M   G  P+  TY  +MD YCK+ ++ +A 
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E    ML   LQP +VTF VLM+G C  G L         M   G+ PN   +N L+  +
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C   N+   + +   M    + PD  TYNILIKG C    ++ A  L ++M ++G     
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            +YNSLI G+ K    E+A  +  +M   G       +   +D   + GN +  + L  E
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732

Query: 390 MVIKSLV 396
            + K LV
Sbjct: 733 AIEKCLV 739


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 275/556 (49%), Gaps = 14/556 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVL 81
           +LLK    + V   +   L +++     P+   FS LI+A++E G ++ AL ++  +  +
Sbjct: 100 SLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREM 159

Query: 82  ----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLC----GLVADVVTYGVLIDCCCGQG 133
               P   A N LLNGL+K GK D   + Y++M+      G V D  T  +++   C  G
Sbjct: 160 HNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLG 219

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
            + +   L      K   P VV Y ++I G C +  +  A      ++  GV+P + TY 
Sbjct: 220 KIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYG 279

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           AL++G+CK  +     +   EM    L  NV  F  ++D   K G +  A      MA+ 
Sbjct: 280 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEM 339

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P+I  YN +I+  CK G + EA  L  + ++  + P+ F+Y  L+   C  G    A
Sbjct: 340 GCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKA 399

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
            G+L ++ + G  +++V+Y + I G    G+++ AL V  +M EKGV P+   ++ L+ G
Sbjct: 400 SGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSG 459

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G I A   L +EM+ +++ PDV VF  LIDG  ++G + E ++++K ++   + P 
Sbjct: 460 LCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPG 519

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +   +++I G  K G++++AL+      ++ +  + +P+   Y+ +I        +  A 
Sbjct: 520 IVGYNAMIKGFCKFGKMTDALSCL----NEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           K+F  M     +P+  TYT+++ G  +   M+    + + M    +VP+ V    +V G+
Sbjct: 576 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGF 635

Query: 554 QENGDLKSAFRCSEFL 569
            + G  + A    E +
Sbjct: 636 FKAGKPERATSIFELM 651



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 241/495 (48%), Gaps = 18/495 (3%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           VLP ++   AL+NG  K G+F++V +   EM   GL  +V  +  +ID     G V +A 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +   M + G  P +  Y I+I+  C   ++ EA+ +    +E G++PN ++Y  LM  Y
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK  D  +A      +     + ++V++G  + G+   GE+  A      M + GVFP+ 
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +YN L+ G CK G +     L SEM    + PDV+ +  LI G    G+L+ A  + + 
Sbjct: 451 QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKV 510

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + ++G+   +V YN++I G+CK G M  ALS  ++M      P+  T+S++IDG  K  +
Sbjct: 511 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHD 570

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           + +A+ ++ +M+     P+V+ +T+LI+G  K  +M    +++  M    + P+V T ++
Sbjct: 571 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTT 630

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ--IL---KASK 494
           L+ G FK G+   A + F  +    +G  C PN   +  +I  L       +L   K SK
Sbjct: 631 LVGGFFKAGKPERATSIF--ELMLMNG--CLPNDATFHYLINGLTNTATSPVLIEEKDSK 686

Query: 495 ---------LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
                     F+ M  D        Y +++  L +   +    +LL  M+  G + D+V 
Sbjct: 687 ENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVC 746

Query: 546 NQVMVRGYQENGDLK 560
              ++ G    G  K
Sbjct: 747 FTALLHGLCHKGKSK 761



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A ++G++  G+ D      E+M+  G+  D   Y +L+   C +G +     L  EM+D+
Sbjct: 420 AFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDR 479

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            ++P V ++  LI G     ++ EA  +F+ +   GV P +  YNA++ G+CK   +  A
Sbjct: 480 NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 539

Query: 209 LEFYHEM--LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           L   +EM  +HH   P+  T+  ++DG  K  ++ +A   F  M K    PN+  Y  LI
Sbjct: 540 LSCLNEMNSVHH--APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G CK  ++  A  + S M+ F++ P+V TY  L+ G    G+ E A  + + M   G L
Sbjct: 598 NGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCL 657

Query: 327 ANVVTYNSLIDGYC--------------KEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            N  T++ LI+G                KE +    L   + M   G +  +  ++S+I 
Sbjct: 658 PNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIV 717

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             CK G +D A  L T+M+ K  + D V FTAL+ GL   G  KE
Sbjct: 718 CLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE 762



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 196/418 (46%), Gaps = 15/418 (3%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V ++ L+  L +     E E +  +M+   + P    ++AL+  Y +   ++RAL+ +H 
Sbjct: 96  VAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHT 155

Query: 215 MLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK----FGVFPNIFVYNCLIDGH 269
           +   HN  P  V   +L++GL K G++  A   +  M +     G   + +  + ++ G 
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGL 215

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G + E   L          P V  YN++I G C  G L+ A   L ++  +G+L  V
Sbjct: 216 CNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTV 275

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TY +LI+G+CK G+ E    + ++M  +G+  NV  F+++ID + K G +  A  +   
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG- 448
           M      PD+  +  +I+   K G ++E   L ++  E  + P+ F+ + L+H   K G 
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGD 395

Query: 449 --RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             + S  L    E  +K+D        V Y A I  +   G+I  A  +   M    + P
Sbjct: 396 YVKASGMLFRIAEIGEKSD-------LVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFP 448

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           D   Y  ++ GL +  R+  + +LL++M+   + PD  +   ++ G+  NG+L  A +
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIK 506



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 177/385 (45%), Gaps = 57/385 (14%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G I+ AL V  K+    V P  Q  N L++GL KKG+  ++     EM+   +  DV  +
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVF 488

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             LID     G++ +A+ +F  +I KG++P +V Y  +I G C   KM +A S    M  
Sbjct: 489 ATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNS 548

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
               P+ YTY+ ++DGY K  D++ AL+ + +M+ H  +PNV+T+  L++G CK  ++  
Sbjct: 549 VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIR 608

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLFEAM-------------SLCS 283
           A   F  M  F + PN+  Y  L+ G  KAG      ++FE M              L +
Sbjct: 609 AEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLIN 668

Query: 284 EMEKFEISP-----------------DVFT-------------YNILIKGLCGVGQLEGA 313
            +     SP                 D FT             YN +I  LC  G ++ A
Sbjct: 669 GLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTA 728

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + LL KM  +G L + V + +L+ G C +G  ++  ++ S    K      V +S  +D 
Sbjct: 729 QLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDK 788

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPD 398
               G +  A      +++++LV D
Sbjct: 789 YLYQGRLSEA-----SVILQTLVED 808



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 157/365 (43%), Gaps = 44/365 (12%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGEL-RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           M   +L+P    F  L+    + G L RA   F         FP     N L++G  K+G
Sbjct: 121 MKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSG 180

Query: 274 NLFEAMSLCSEMEKFEISP----DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            +  A+ L  +M + +       D +T +I++KGLC +G++E    L++  + +  + +V
Sbjct: 181 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHV 240

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V YN +IDGYCK+GD++ A    +++  KGV P V T+ +LI+G CKAG  +A   L TE
Sbjct: 241 VFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 300

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + L  +V VF  +ID   K G + E   + + M E                      
Sbjct: 301 MAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMG-------------------- 340

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
                              C P+   Y  +I   C  G+I +A +L    +   L P+  
Sbjct: 341 -------------------CGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKF 381

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           +YT ++    +    +    +L  + ++G   D V     + G    G++  A    E +
Sbjct: 382 SYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKM 441

Query: 570 KESRI 574
            E  +
Sbjct: 442 MEKGV 446


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 246/466 (52%), Gaps = 4/466 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +L  L+   ++ +    Y++M L  +  D  T  ++I+C C  G V+ A +   +++ 
Sbjct: 62  NKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILK 121

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  +    L+ GLC E K+ EA      +   G   +  +Y  L++G CK+ +   
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRA 181

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+     +   +++PNVV + +++D LCK   +  A + +  M   G+ P++  Y+ L+ 
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C  G L  A+ L +EM    I+PD++TY IL+  LC  G+++ AE +L  M K  +  
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VV Y++L+DGYC   ++  A  V   MT+ GV P+V  +S +I+G CK   +D A+ L+
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+  K++VPD V +T+LID L K G +     L+ EML+    P V T ++LI  L KN
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +  A+  F +  D+       PN   +  ++  LC  G++  A + F D+ +     +
Sbjct: 422 GHLDRAIALFNKMKDQA----IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLN 477

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             TYT M+ GL +   + + + L + M   G + DAV  ++M+R +
Sbjct: 478 VRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAF 523



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 253/461 (54%), Gaps = 9/461 (1%)

Query: 44  SLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+ +  P  F+  II   F   G +  A     KI  L   P     N L+ GL  +G
Sbjct: 83  QMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEG 142

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           K      F+++++  G     ++YG+LI+  C  G+   A+ L   +    I P VVIY+
Sbjct: 143 KVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYS 202

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ++I  LC +  + EA  ++  M   G+ P++ TY+ L+ G+C V  +NRA++  +EM+  
Sbjct: 203 MIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLE 262

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ P++ T+ +L+D LCK G+++ A N    M K  V  ++ VY+ L+DG+C    +  A
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNA 322

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   M +  ++PDV  Y+I+I GLC + +++ A  L ++++++ ++ + VTY SLID 
Sbjct: 323 KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDC 382

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G +     +  +M ++G  P+V+T+++LID  CK G++D A+ L+ +M  +++ P+
Sbjct: 383 LCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  FT L+DGL K G +K  L  ++++L      +V T + +I+GL K G +  AL    
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL-- 500

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            ++   D G C  + V +  +I+A     +  KA KL  +M
Sbjct: 501 -QSRMEDNG-CISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/426 (33%), Positives = 232/426 (54%), Gaps = 4/426 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L+ +M    +EP      I+I+  C+  ++V A S    + + G  PN  T N LM 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C    V  AL F+ ++L    + + +++G+L++G+CK+GE RAA      + ++ + P
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +Y+ +ID  CK   + EA  L +EM    ISPDV TY+IL+ G C VGQL  A  LL
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  E I  ++ TY  L+D  CKEG +++A +V + M +  V  +VV +S+L+DG C  
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ++ A  ++  M    + PDV  ++ +I+GL K   + E L L++E+ +  + P   T 
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI  L K+GRIS   + F E  D+       P+ + Y  +I ALC +G + +A  LF+
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQ----PPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M+   +RP+  T+T +L GL +  R+ + +    D++  G   +     VM+ G  + G
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEG 492

Query: 558 DLKSAF 563
            L  A 
Sbjct: 493 LLDEAL 498



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 255/489 (52%), Gaps = 7/489 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ ++I+   +     A+ +Y+++E   V P     N ++N     G+    +    +++
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   + +T   L+   C +G V +AL   D+++ +G   + + Y ILI+G+C   +  
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  + R +    + PN+  Y+ ++D  CK   V+ A + Y EM+   + P+VVT+ +L+
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C VG+L  A +    M    + P+I+ Y  L+D  CK G + EA ++ + M K  ++
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV  Y+ L+ G C V ++  A+ +   M + G+  +V  Y+ +I+G CK   +++AL++
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNL 360

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             ++ +K + P+ VT++SLID  CK+G I     L+ EM+ +   PDV+ +  LID L K
Sbjct: 361 FEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCK 420

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G++   + L+ +M +  I P+V+T + L+ GL K GR+ NAL FF    D    GYC  
Sbjct: 421 NGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFF---QDLLTKGYCL- 476

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  +I  LC +G + +A  L S M  +    D  T+  M+R             L+
Sbjct: 477 NVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLV 536

Query: 532 ADMIKMGIV 540
            +MI  G++
Sbjct: 537 REMIARGLL 545



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 204/405 (50%), Gaps = 8/405 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A S F  M      P+ + +N ++     V     A+  Y +M    ++P+  T  +++
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKFE 289
           +  C  G++  A +    + K G  PN    N L+ G C  G + EA+    ++  + F 
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +S    +Y ILI G+C +G+   A  LL+++ +  I  NVV Y+ +ID  CK+  +++A 
Sbjct: 161 LSG--ISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++M  KG+ P+VVT+S L+ G C  G ++ A+ L  EMV++++ PD+  +T L+D L
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G +KE   +   M++A +   V   S+L+ G      ++NA   F   T        
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG----V 334

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           +P+   Y+ +I  LC   ++ +A  LF ++   N+ PD  TYT+++  L ++ R+  V  
Sbjct: 335 TPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWD 394

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           L  +M+  G  PD +    ++    +NG L  A      +K+  I
Sbjct: 395 LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 143/291 (49%), Gaps = 4/291 (1%)

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           N  +A+S  + M     +P  F +N ++  L  V +   A  L ++M    +  +  T N
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            +I+ +C  G +  A S  S++ + G +PN +T ++L+ G C  G +  A+  + +++ +
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
                 + +  LI+G+ K G  +  +RL + +    I P+V   S +I  L K+  +  A
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            + + E      G   SP+ V Y+ ++   C  GQ+ +A  L ++M  +N+ PD  TYT 
Sbjct: 218 YDLYTEMV----GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           ++  L +  ++ +   +LA M+K  +  D V+   ++ GY    ++ +A R
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKR 324


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 156/481 (32%), Positives = 256/481 (53%), Gaps = 15/481 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQAC-NALLNGLIK 96
           L  +E+   +P+V  +   I      G +E AL + R  +I   P    C NA+++   +
Sbjct: 276 LEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCR 335

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+    +E  E+M   G+     +Y +LID  C +G V KAL+L +EM+   ++P++V 
Sbjct: 336 NGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVT 395

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ L  GLC       + SMF ++   G   ++ +YN L++G+    D+  A +  HEM 
Sbjct: 396 YSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMR 455

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            +   PN  TF  L+ G CK   L  A   F  M K GV  NIF  N + D   + G+ +
Sbjct: 456 MNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFW 515

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ L +E++   I P+ +TYNI+IK LC   + E A  +L  M K  +    + YN+LI
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLI 575

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY K+ +  KAL + ++M + G+ P++VT++ LI+       +  A  L+ EM+ K LV
Sbjct: 576 DGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLV 635

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD ++FT +I G  K G+MK    LY+EM +   +P+V T + LI G FK  R+  A +F
Sbjct: 636 PDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKA-DF 694

Query: 457 FLEKTDKTDGGYCSPNHVLYAAII---QALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              K  + +    +P+ + Y A+I   Q+L Y  ++    ++F++M+ + + P+   Y T
Sbjct: 695 LFNKMKRDN---VTPDGLTYTALIFGYQSLGYSDRV---REMFNEMKENGVFPNYTAYAT 748

Query: 514 M 514
           +
Sbjct: 749 L 749



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 250/547 (45%), Gaps = 47/547 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V + LI  F+E   + +A  V+   R+  +   I +CN LLN   +  + + +   +EE+
Sbjct: 180 VANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEEL 239

Query: 111 VLCGLVADVVTYGVLIDCCCGQG-----DVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              G   +V TY ++++  C        D++KA  + +EM   G  PTVV Y   IHGLC
Sbjct: 240 KDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLC 299

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +  A  + R +R      N Y YNA++  +C+  +++ A E   +M  H + P   
Sbjct: 300 RAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAY 359

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------------ 273
           ++ +L+DGLCK G++  A +    M +  V P++  Y+ L DG CK+G            
Sbjct: 360 SYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNL 419

Query: 274 -----------------------NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
                                  ++  A  L  EM      P+ FT+N LI G C   +L
Sbjct: 420 GAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRL 479

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  +   M K G+  N+ T N + D + +EG   +AL + +++ + G+ PN  T++ +
Sbjct: 480 DKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIV 539

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   CK    + A  +   M+  ++ P  + +  LIDG +K  N  + L LY +ML+  I
Sbjct: 540 IKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGI 599

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            PS+ T + LI+      ++  A   F E   K       P+ +++  II   C  G + 
Sbjct: 600 PPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKG----LVPDEIIFTCIIAGFCKVGDMK 655

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A  L+ +M      P+  TYT ++ G  + KRM     L   M +  + PD +    ++
Sbjct: 656 SAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715

Query: 551 RGYQENG 557
            GYQ  G
Sbjct: 716 FGYQSLG 722



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 212/517 (41%), Gaps = 93/517 (17%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM----RECGV-VPNLYT--- 191
           N F  +   G   ++  + I+IH L +    +E +   R +    +E  + V  L++   
Sbjct: 107 NFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLL 166

Query: 192 ---YNALMDGYCKVADV-----------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
               +A M G   VA+V             A + + +     L+ N+++   L++   + 
Sbjct: 167 DSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEA 226

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-----NLFEAMSLCSEMEKFEISP 292
            +     + F  +   G  PN+F Y  +++ +CK       ++ +A  +  EME    SP
Sbjct: 227 NQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESP 286

Query: 293 DVFTYNILIKGLCGV-----------------------------------GQLEGAEGLL 317
            V TY   I GLC                                     G+L  A  LL
Sbjct: 287 TVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELL 346

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M   GI     +Y+ LIDG CK+G +EKAL +  +M +  V+P++VT+SSL DG CK+
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKS 406

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  + ++ ++  +  +    DV+ +  LI+G     +M    +L  EM      P+ FT 
Sbjct: 407 GLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTF 466

Query: 438 SSLIHGLFKNGRISNALNFF-------------------------------LEKTDKTDG 466
           + LIHG  K  R+  AL  F                               L+  ++   
Sbjct: 467 NRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQD 526

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y  +I+ LC + +  KA ++   M  +N+ P    Y T++ G  +      
Sbjct: 527 LGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTK 586

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++L A M+K+GI P  V   +++  +     ++ A+
Sbjct: 587 ALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAY 623



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 3/193 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  +++  +  +AL +Y K   + + P+I     L+N    + K    +  ++EM+
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GLV D + +  +I   C  GD+  A  L++EM   G  P VV YT LI G     +M 
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A+ +F  M+   V P+  TY AL+ GY  +   +R  E ++EM  + + PN   +  L 
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLG 750

Query: 232 DGLCKVGELRAAG 244
             L  V E  A G
Sbjct: 751 LHLGVVREEPAKG 763


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 265/516 (51%), Gaps = 10/516 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
              L++ +  P V++  T+I+ +   G  +EA   L   ++   +P++ A N +L  L +
Sbjct: 331 FEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGR 390

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KGK +     ++EM       ++ TY +LID  C  G++  AL + D M + G+ P ++ 
Sbjct: 391 KGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
             I+I  LC   K+ EA S+F  +      P+  T+ +L+DG  +   V+ A   Y +ML
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  PNVV +  L+    K G        +  M   G  P++ + N  +D   KAG + 
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +  +L  E++   + PDV +Y+ILI GL   G       L  +M ++G+  +V+ YN++I
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+CK G ++KA  +  +M  KG++P VVT+ S++DG  K   +D A  L+ E     + 
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            +VV++++LIDG  K G + E   + +E+++  +TP+ +T + L+  L K   I  A   
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F    +      CSPN + Y+ +I  LC   +  KA   + +M+   L+P+N TYTTM+ 
Sbjct: 750 FQNMKNLK----CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           GL +A  +++   L       G VPD+     M+ G
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 38/532 (7%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           WV RK +     +  NA L  + +    D + +  EEM + G          L+      
Sbjct: 122 WVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKS 181

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
             + +A  + + M      P    YT LI  L   N+     ++F  M+E G   N++ +
Sbjct: 182 HKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLF 241

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+  + +   ++ AL    EM  ++   ++V + V +D   KVG++  A  FF  M  
Sbjct: 242 TTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKA 301

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ P+   Y  LI   CKA  L EA+ L  E++     P V+ YN +I G    G+ + 
Sbjct: 302 QGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDE 361

Query: 313 AEGLLQKMYKEGILANVV----------------------------------TYNSLIDG 338
           A  LL++  ++G + +V+                                  TYN LID 
Sbjct: 362 AYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDM 421

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK G++E AL V   M E G+ PN++T + +ID  CKA  +D A  ++  +  K   PD
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              F +LIDGL + G + +   LY++ML++   P+V   +SLI   FK GR  +    + 
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK 541

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   +     CSP+ +L  + +  +   G++ K   LF ++++  L PD  +Y+ ++ GL
Sbjct: 542 EMVHRG----CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++A    +   L  +M + G+  D +    ++ G+ ++G +  A++  E +K
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 210/405 (51%), Gaps = 5/405 (1%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---E 79
           + L K++K    C S+F  L+  ++   +   F +LI      G +++A  +Y K+   +
Sbjct: 455 DRLCKAQKLDEAC-SIFLGLDH-KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            +P +    +L+    K G+ +   + Y+EMV  G   D++     +DC    G+V K  
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF+E+  +G+ P V  Y+ILIHGL       E   +F  M+E G+  ++  YN ++DG+
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V++A +   EM    LQP VVT+G ++DGL K+  L  A   F      GV  N+
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y+ LIDG  K G + EA  +  E+ +  ++P+ +T+N L+  L    +++ A+   Q 
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M       N +TY+ +I+G C      KA     +M ++G++PN +T++++I G  KAGN
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           +  A GL+        VPD   + A+I+GLS      +   +++E
Sbjct: 813 VMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +E+   ++ +I+   ++P +++ + L++GL+K G     ++ + EM   GL  DV+ Y
Sbjct: 566 GEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAY 625

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +ID  C  G V KA  L +EM  KG++PTVV Y  ++ GL   +++ EA  +F   + 
Sbjct: 626 NTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 685

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            GV  N+  Y++L+DG+ KV  ++ A     E++   L PN  T+  L+D L K  E+  
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F +M      PN   Y+ +I+G C      +A     EM+K  + P+  TY  +I 
Sbjct: 746 AQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G +  A GL  +    G + +   YN++I+G         A  V  +   KG   
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRV 865

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
           N  T   L+D   KA  ++ A
Sbjct: 866 NSKTCVVLLDALHKADCLEQA 886



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 192/460 (41%), Gaps = 45/460 (9%)

Query: 134 DVMKALNLFDEMIDKGIEPTVV-------------------------------IYTILIH 162
           DV +ALN+FDEM     +P V+                               +Y   + 
Sbjct: 86  DVEEALNVFDEM----SQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLM 141

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            +     +   E +   M   G   + +    L+  + K   +  A      M     +P
Sbjct: 142 VMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRP 201

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
               +  L+  L            F  M + G   N+ ++  L+    + G +  A+SL 
Sbjct: 202 AFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLL 261

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM+    + D+  YN+ I     VG+++ A     +M  +G++ + VTY +LI   CK 
Sbjct: 262 DEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKA 321

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A+ +  ++      P V  ++++I G   AG  D A  L      K  +P V+ +
Sbjct: 322 RRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAY 381

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             ++  L + G ++E LR++ EM +    P++ T + LI  L K G +  AL   ++ T 
Sbjct: 382 NCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALK--VQDTM 438

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K  G +  PN +    +I  LC   ++ +A  +F  +      PD+ T+ +++ GL R  
Sbjct: 439 KEAGLF--PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG 496

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVR-----GYQENG 557
           R+ D   L   M+    +P+ V+   +++     G +E+G
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 223/403 (55%), Gaps = 4/403 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A + +++G  K G+ D      +EM   G+  + + Y  L+DC   + D  +   L + M
Sbjct: 134 AASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIM 193

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            + GIE TV  YTIL+  L     + + E++   M+   V  ++Y Y A+++ YC+  +V
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA E + E + + ++PN  T+GVL++G CK+G++ AA      M   GV  N  ++N +
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+ G +  A+ + + MEK  I  DV+TYN L  GLC V ++  A+ LL  M ++G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N VTY +LI  +CKEGDM +A  +  +M  KG  P+VVT++ ++DG  K G+I  A  
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K LVPDV  + +L+ G   +G +   L+L++EM      P+V   ++LI GL 
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           K GR   A   +    D    G  +P+  LY+A++ +L  D +
Sbjct: 494 KEGRSEEAFQLY---DDMLKAG-LTPDDSLYSALVGSLHTDNR 532



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 202/393 (51%), Gaps = 4/393 (1%)

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           ++++ G C   ++ +A ++   M   GV  N   YN+L+D Y +  D  R  E    M +
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++  V T+ +L+D L   G++         M    V  ++++Y  +I+ +C+AGN+  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  E     I P+  TY +LI G C +GQ+E AE LL  M   G+  N + +N++ID
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           GYC++G ++ AL V + M + G+E +V T+++L  G C+   +  A  L   M+ K + P
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + V +T LI    K+G+M E  RL++EM      PSV T + ++ G  K G I  A  F 
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   K       P+   YA+++   C +G++  A KLF +M+     P+   YT ++ G
Sbjct: 436 KEMEKKG----LVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           L +  R  +   L  DM+K G+ PD  +   +V
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 176/347 (50%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
             ++E L +     +   +     L++ L   G    V    +EM    +  DV  Y  +
Sbjct: 184 ARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAV 243

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+  C  G+V +A  +FDE +  GIEP    Y +LI+G C   +M  AE +   M+  GV
Sbjct: 244 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGV 303

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             N   +N ++DGYC+   V+ AL+    M    ++ +V T+  L  GLC+V  +  A  
Sbjct: 304 GHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKT 363

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M + GV PN   Y  LI  HCK G++ EA  L  EM      P V TYN+++ G  
Sbjct: 364 LLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYI 423

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +  AE   ++M K+G++ +V TY SL+ G+C  G ++ AL +  +M  +G EPNVV
Sbjct: 424 KKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVV 483

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +++LI G  K G  + A  LY +M+   L PD  +++AL+  L  D
Sbjct: 484 AYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTD 530



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 167/345 (48%), Gaps = 10/345 (2%)

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           V++DG CK G +  A      M + GV  N   YN L+D + +  +      L   ME  
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENG 196

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I   V TY IL+  L   G +   E ++ +M  + +  +V  Y ++I+ YC+ G++ +A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRA 256

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V  +    G+EPN  T+  LI+G CK G ++AA  L  +M  + +  + ++F  +IDG
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDG 316

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTD 465
             + G +   L++   M +  I   V+T ++L  GL +  R++ A   L+  +EK     
Sbjct: 317 YCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG---- 372

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN+V Y  +I   C +G +++A +LF +M      P   TY  M+ G ++   + 
Sbjct: 373 ---VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           +      +M K G+VPD      +V G+  NG +  A +  E +K
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 4/204 (1%)

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           S ++DG CK+G +D A  L  EM    +  + + + +L+D   +  +      L + M  
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I  +V T + L+  L   G IS       E   K   G    +  LY A+I A C  G
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG----DVYLYTAVINAYCRAG 251

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + +AS++F +   + + P+  TY  ++ G  +  +M    MLLADM   G+  + +I  
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311

Query: 548 VMVRGYQENGDLKSAFRCSEFLKE 571
            M+ GY   G + +A +    +++
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEK 335



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++ ++  + + G I EA    +++E   ++P +    +L++G    GK D   + 
Sbjct: 410 PSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKL 469

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +EEM   G   +VV Y  LI     +G   +A  L+D+M+  G+ P   +Y+ L+  L  
Sbjct: 470 FEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHT 529

Query: 167 ENK 169
           +N+
Sbjct: 530 DNR 532


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 266/530 (50%), Gaps = 8/530 (1%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           Y++F  +    IP  N   ++ +I    +   ++ A  V++++    V P I     L++
Sbjct: 224 YNLFLDMTDQGIPP-NVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIH 282

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G +  G++  V    +EM   GL  D  TYG+L+D  C +G   +A  LFD MI KGI+P
Sbjct: 283 GYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP 342

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V IY I++HG   +  + E  S    M   G+ PN Y +N +   + K A +  A++ +
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           ++M    L PNVV +  L+D LCK+G +  A   F  M   GV PNI V+  L+ G C  
Sbjct: 403 NKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTI 462

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
               +A  L  EM    I P+V  +N ++  LC  G++  A+ L+  M + G   ++++Y
Sbjct: 463 DKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISY 522

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI G+C  G  ++A  +   M   G++PN  T+++L+ G C+ G ID A  ++ EM+ 
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + P VV +  ++ GL K     E   LY  M+ +    S++T + +++GL KN  +  
Sbjct: 583 NGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           AL  F     K        + + +  +I AL  DG+   A  LF+ + ++ L PD  TY 
Sbjct: 643 ALKMFQSLCSKD----LQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYR 698

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +   L+    + +   + ++M K G  P++++   +VR     GD+  A
Sbjct: 699 LIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRA 748



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 261/551 (47%), Gaps = 45/551 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI------EVLPAIQACNALLNGLIKKGKFDSVW 104
           N   ++TL+  F +    EEAL +   +         P + + N ++NG   +G+ D  +
Sbjct: 165 NVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAY 224

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + +M   G+  +VVTY ++ID  C    V +A  +F +MIDKG+ P +V YT LIHG 
Sbjct: 225 NLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGY 284

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            +  +  E   M + M   G+ P+ +TY  L+D  CK      A + +  M+   ++P+V
Sbjct: 285 LSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDV 344

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             +G+++ G    G L    +F   M   G+ PN +++N +     K   + EAM + ++
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  +SP+V  Y  LI  LC +G+++ AE    +M  EG+  N+V + SL+ G C    
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464

Query: 345 MEKALSVCSQMTEKGVEPNVV-----------------------------------TFSS 369
            EKA  +  +M  +G+ PNVV                                   ++++
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNA 524

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G C  G  D A  L   M+   L P+   +  L+ G  +DG + +   +++EML   
Sbjct: 525 LIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG 584

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ITP V T ++++HGLFK  R S A   +L     T G   S     Y  I+  L  +  +
Sbjct: 585 ITPVVVTYNTILHGLFKTRRFSEAKELYLNMI--TSGKQWSI--YTYNIILNGLSKNNCV 640

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A K+F  + S +L+ D  T+  M+  LL+  R  D M L A +   G+VPD    +++
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700

Query: 550 VRGYQENGDLK 560
                E G L+
Sbjct: 701 AENLIEEGSLE 711



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 238/489 (48%), Gaps = 13/489 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMV---LCGLVADVVTYGVLIDCCCGQGDVMKA 138
           P + + N LL G   + + +   E    M    +     ++V+Y  +I+    +G V KA
Sbjct: 164 PNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA 223

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            NLF +M D+GI P VV YTI+I GLC    +  AE +F+ M + GV PN+ TY  L+ G
Sbjct: 224 YNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHG 283

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           Y  +      +    EM  H L+P+  T+G+L+D LCK G+   A   F  M + G+ P+
Sbjct: 284 YLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD 343

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +Y  ++ G+   G L E  S    M    ISP+ + +NI+         +  A  +  
Sbjct: 344 VSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFN 403

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM ++G+  NVV Y +LID  CK G ++ A    +QM  +GV PN+V F+SL+ G C   
Sbjct: 404 KMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTID 463

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A  L+ EMV + + P+VV F  ++  L  +G + +  RL   M      P + + +
Sbjct: 464 KWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYN 523

Query: 439 SLIHG---LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           +LI G   + K    S  L+  L    K       PN   Y  ++   C DG+I  A  +
Sbjct: 524 ALIRGHCLVGKTDEASKLLDIMLSVGLK-------PNECTYNTLLHGYCRDGRIDDAYSV 576

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M S+ + P   TY T+L GL + +R  +   L  +MI  G         +++ G  +
Sbjct: 577 FQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSK 636

Query: 556 NGDLKSAFR 564
           N  +  A +
Sbjct: 637 NNCVDEALK 645



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 238/533 (44%), Gaps = 41/533 (7%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           S FN +      K  P VF  S L+  F  MG +E     +                 GL
Sbjct: 77  SCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAF-----------------GL 119

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN-LFDEMIDKGIEPT 153
           I K  +          +L GL              C    V +A+  L   M + G  P 
Sbjct: 120 ILKTGWRVNDVVVVNRLLKGL--------------CDAKRVGEAMGVLLRRMSELGCTPN 165

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGV---VPNLYTYNALMDGYCKVADVNRALE 210
           VV Y  L+ G C+EN+  EA  +   M +  V    PNL +YN +++G+     V++A  
Sbjct: 166 VVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYN 225

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            + +M    + PNVVT+ +++DGLCK   +  A   F  M   GV PNI  Y CLI G+ 
Sbjct: 226 LFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYL 285

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G   E + +  EM    + PD FTY +L+  LC  G+   A  L   M ++GI  +V 
Sbjct: 286 SIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVS 345

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y  ++ GY  +G + +  S    M   G+ PN   F+ +     K   I  AM ++ +M
Sbjct: 346 IYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKM 405

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + L P+VV +  LID L K G + +    + +M+   + P++   +SL++GL    + 
Sbjct: 406 RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKW 465

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A   F E  ++       PN V +  I+  LC +G+++KA +L   M     RPD  +
Sbjct: 466 EKAGELFFEMVNQG----IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           Y  ++RG     +  +   LL  M+ +G+ P+      ++ GY  +G +  A+
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 191/378 (50%), Gaps = 1/378 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +     KK       + + +M   GL  +VV Y  LID  C  G V  A   F++MI+
Sbjct: 383 NIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+ P +V++T L++GLC  +K  +A  +F  M   G+ PN+  +N +M   C    V +
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK 502

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A      M     +P+++++  L+ G C VG+   A      M   G+ PN   YN L+ 
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLH 562

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+C+ G + +A S+  EM    I+P V TYN ++ GL    +   A+ L   M   G   
Sbjct: 563 GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQW 622

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ TYN +++G  K   +++AL +   +  K ++ +++TF+ +I    K G  + AM L+
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             +    LVPDV  +  + + L ++G+++E   ++ EM ++   P+   ++ L+  L   
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742

Query: 448 GRISNALNFFLEKTDKTD 465
           G IS A   +L K D+ +
Sbjct: 743 GDISRA-GAYLSKIDEKN 759



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 210/470 (44%), Gaps = 47/470 (10%)

Query: 113 CGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKM 170
           C  VA DV TY +L+ C C  G +      F  ++  G     VV+   L+ GLC+  ++
Sbjct: 87  CSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRV 146

Query: 171 VEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
            EA   + R M E G  P                                   NVV++  
Sbjct: 147 GEAMGVLLRRMSELGCTP-----------------------------------NVVSYNT 171

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVF---PNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           L+ G C       A      MA   V    PN+  YN +I+G    G + +A +L  +M 
Sbjct: 172 LLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMT 231

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I P+V TY I+I GLC    ++ AEG+ Q+M  +G+  N+VTY  LI GY   G  +
Sbjct: 232 DQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWK 291

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           + + +  +M+  G+EP+  T+  L+D  CK G    A  L+  M+ K + PDV ++  ++
Sbjct: 292 EVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIIL 351

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G +  G + E       M+   I+P+ +  + +     K   I  A++ F    +K   
Sbjct: 352 HGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF----NKMRQ 407

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              SPN V YA +I ALC  G++  A   F+ M ++ + P+   +T+++ GL    +   
Sbjct: 408 QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEK 467

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
              L  +M+  GI P+ V    ++      G +  A R  + ++  R+G+
Sbjct: 468 AGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME--RVGT 515



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 194/394 (49%), Gaps = 3/394 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +F+ +  AF++   I EA+ ++ K+    + P +     L++ L K G+ D     +
Sbjct: 378 NHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKF 437

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G+  ++V +  L+   C      KA  LF EM+++GI P VV +  ++  LC E
Sbjct: 438 NQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTE 497

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++++A+ +   M   G  P++ +YNAL+ G+C V   + A +    ML   L+PN  T+
Sbjct: 498 GRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTY 557

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C+ G +  A + F  M   G+ P +  YN ++ G  K     EA  L   M  
Sbjct: 558 NTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMIT 617

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                 ++TYNI++ GL     ++ A  + Q +  + +  +++T+N +I    K+G  E 
Sbjct: 618 SGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKED 677

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+++ + ++  G+ P+V T+  + +   + G+++   G+++EM      P+ ++   L+ 
Sbjct: 678 AMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVR 737

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            L   G++        ++ E   +    T S LI
Sbjct: 738 RLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 193/394 (48%), Gaps = 6/394 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
            N +     +P+V  ++TLI A  ++G +++A   + ++    V P I    +L+ GL  
Sbjct: 402 FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K++   E + EMV  G+  +VV +  ++   C +G VMKA  L D M   G  P ++ 
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI G C   K  EA  +   M   G+ PN  TYN L+ GYC+   ++ A   + EML
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEML 581

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + + P VVT+  ++ GL K      A   +++M   G   +I+ YN +++G  K   + 
Sbjct: 582 SNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVD 641

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ +   +   ++  D+ T+NI+I  L   G+ E A  L   +   G++ +V TY  + 
Sbjct: 642 EALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIA 701

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +   +EG +E+   + S+M + G  PN +  + L+      G+I  A    +++  K+  
Sbjct: 702 ENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFS 761

Query: 397 PDVVVFTALIDGLSKDGNMKETL-RLYKEMLEAK 429
            +    + LI   S++ +  ++L   Y  + EAK
Sbjct: 762 LEASTTSMLISLFSREEHQAKSLPEKYHFLNEAK 795


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 247/498 (49%), Gaps = 46/498 (9%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R + + P I  CN+LL  L++  + +  W+F +EM   GL  +     + I   C QG++
Sbjct: 178 RHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNI 237

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                L  EM   GI+P VV YTI+I  LC  + + EA S+   M + GV  +  + +++
Sbjct: 238 DTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSV 297

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DGYCKV     A++        NL PN+  F   +  LC  G +  A   F  M + G+
Sbjct: 298 VDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGL 354

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+ F Y  ++ G+CK  ++  A+    +M K  I P V TY +LI   C  G +E AE 
Sbjct: 355 IPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEY 414

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L Q+M  EG++ +VV+YN+L++GY K+G ++KA  + S M   GV P++VT++ LI G  
Sbjct: 415 LFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLI 474

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G ++ A  +  E+  +   PDVV FT +I G S  GN +E   L+  M E  + P V 
Sbjct: 475 KRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVV 534

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T S+L++                        GYC           +  C    + +A+ L
Sbjct: 535 TCSALLN------------------------GYC-----------RTRC----MAEANVL 555

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ- 554
           F  M    L+ D   Y +++ G      + D   L++ MI+ GI+P+ + +  +V GY+ 
Sbjct: 556 FHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEK 615

Query: 555 ---ENGDLKSAFRCSEFL 569
              EN   ++AF+  + L
Sbjct: 616 KCVENPVERAAFKLQQLL 633



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 239/476 (50%), Gaps = 9/476 (1%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
             YG+L++C   +     AL L  +M    I P + +   L+  L    ++  A    + 
Sbjct: 152 TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M+  G+  N    +  + GYC   +++   +   EM +  ++P+VV + +++D LCK+  
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L+ A +    M + GVF +    + ++DG+CK G   EAM +   +E F +SP++F +N 
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV---LEVFNLSPNIFVFNS 328

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
            I  LC  G +  A  + Q M + G++ +  +Y +++ GYCK  D+  AL    +M ++G
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P+V T++ LID  CK GN++ A  L+  M+ + LVPDVV +  L++G  K G++++  
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAF 448

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L   M  A ++P + T + LIHGL K G ++ A +   E T +   G+ SP+ V +  I
Sbjct: 449 ELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRR---GF-SPDVVTFTNI 504

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I      G   +A  LF  M   +L PD  T + +L G  R + M +  +L   M+  G+
Sbjct: 505 IGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGL 564

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTV 595
             D ++   ++ G+   G++  A      + E  I  +    H     LG+ K  V
Sbjct: 565 KADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHAL--VLGYEKKCV 618



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 167/326 (51%), Gaps = 8/326 (2%)

Query: 41  ALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLI 95
           A++ LE+   +P+  VF++ I      G++ +A  V++   ++ ++P   +   ++ G  
Sbjct: 310 AMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYC 369

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K     +  ++  +M+  G+   V TY +LID CC  G++  A  LF  MI +G+ P VV
Sbjct: 370 KVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVV 429

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  L++G   +  + +A  +   MR  GV P+L TYN L+ G  K   VN A +   E+
Sbjct: 430 SYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDEL 489

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                 P+VVTF  ++ G    G    A   F +M++  + P++   + L++G+C+   +
Sbjct: 490 TRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCM 549

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L  +M    +  DV  YN LI G C +G ++ A  L+  M + GI+ N +T+++L
Sbjct: 550 AEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHAL 609

Query: 336 IDGY---CKEGDMEKALSVCSQMTEK 358
           + GY   C E  +E+A     Q+  K
Sbjct: 610 VLGYEKKCVENPVERAAFKLQQLLLK 635


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 256/519 (49%), Gaps = 15/519 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    +   ++ A  V++++    V P     N L++G +  GK+  V    
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM   GL  D  TYG L++  C  G   +A  LFD MI KGI+P V IY ILIHG   +
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATK 356

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + E   +   M E G+ P+ + +N +   Y K A ++ A+  +++M    L P+VV +
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNY 416

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+D LCK+G +  A   F  M   GV PNIFV+N L+ G C      +A     EM  
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PDV  +N ++  LC  GQ+  A+ L+  M + G    V++Y +LI G+C  G +++
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDE 536

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A      M   G++P+  T+++L+ G C+AG ID A G++ EM+   + P VV ++ ++ 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL       E   LY  M+ +    +++  + +++GL KN  +  A   F          
Sbjct: 597 GLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLF--------QS 648

Query: 468 YCSPNHVL----YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            CS +  L    +  +I AL   G+   A  LF+ + S  L PD  TY  +   L+    
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + +   L + M K G  P++ +   +VR     GD+  A
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 237/486 (48%), Gaps = 7/486 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKA 138
           P + + N LL G   + + +   E    M          +VV+Y ++I+    +G V KA
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKA 222

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            NLF EM+D+GI+P VV YT +I GLC    +  AE +F+ M + GV P+  TYN L+ G
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHG 282

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           Y  +      +    EM  H L+P+  T+G L++ LC  G  R A   F  M + G+ PN
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPN 342

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +Y  LI G+   G L E   L + M +  +SPD   +NI+         ++ A  +  
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM ++G+  +VV Y +LID  CK G ++ A+   +QM  +GV PN+  F+SL+ G C   
Sbjct: 403 KMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A   Y EM+ + + PDVV F  ++  L   G + +  RL   M      P V + +
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYT 522

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI G    GRI  A     +  D        P+   Y  ++   C  G+I  A  +F +
Sbjct: 523 TLIGGHCLVGRIDEA----AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M  + + P   TY+T+L GL   +R  +   L  +MI  G   +  I  +++ G  +N  
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNC 638

Query: 559 LKSAFR 564
           +  AF+
Sbjct: 639 VDEAFK 644



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 261/567 (46%), Gaps = 51/567 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI------EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           ++TL+  F      EEAL +   +         P + +   ++NG   +G+ D  +  + 
Sbjct: 168 YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFL 227

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM+  G+  +VVTY  +ID  C    V +A  +F +MIDKG++P    Y  LIHG  +  
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K  E   M   M   G+ P+ YTY +L++  C       A   +  M+   ++PNV  +G
Sbjct: 288 KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYG 347

Query: 229 VLMDGLCKVGELRA-----------------------------------AGNFFVHMAKF 253
           +L+ G    G L                                     A + F  M + 
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P++  Y  LID  CK G + +A+   ++M    ++P++F +N L+ GLC V + E A
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           +    +M  +GI  +VV +N+++   C +G + KA  +   M   G  P V+++++LI G
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ID A      M+   L PD   +  L+ G  + G + +   +++EML   ITP 
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T S+++HGLF   R S A   +L     T G     N  +Y  I+  L  +  + +A 
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMI--TSGK--QWNIWIYNIILNGLSKNNCVDEAF 643

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA-----VINQV 548
           KLF  + S + + +  T+  M+  L ++ R  D M L A +   G+VPD      +   +
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL 703

Query: 549 MVRGY-QENGDLKSAFRCSEFLKESRI 574
           +  GY +E  DL SA   S     SR+
Sbjct: 704 IEEGYLEEFDDLFSAMEKSGTTPNSRM 730



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 222/488 (45%), Gaps = 43/488 (8%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA- 173
           +  D  TY +LI C C  G +      F  ++  G     ++   L+ GLC+  ++ EA 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH-------------------- 213
           + + + M E G  P++ +YN L+ G+C       ALE  H                    
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 214 ------------------EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                             EM+   +QPNVVT+  ++DGLCK   +  A   F  M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YNCLI G+   G   E + +  EM    + PD +TY  L+  LC  G+   A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L   M ++GI  NV  Y  LI GY  +G + +   + + M E G+ P+   F+ +     
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ID AM ++ +M  + L PDVV + ALID L K G + + +  + +M+   + P++F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             +SL++GL    +   A  F+ E  ++       P+ V +  I+  LC  GQ++KA +L
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQG----IRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M     RP   +YTT++ G     R+ +    L  M+ +G+ PD      ++ GY  
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 556 NGDLKSAF 563
            G +  A+
Sbjct: 566 AGRIDDAY 573



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 199/408 (48%), Gaps = 3/408 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N +++  LI  ++  G + E    L +  +  + P     N +     KK   D    
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M   GL  DVV YG LID  C  G V  A+  F++M+++G+ P + ++  L++GLC
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K  +A+  +  M   G+ P++  +N ++   C    V +A      M     +P V+
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+ G C VG +  A      M   G+ P+ + YN L+ G+C+AG + +A  +  EM
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  I+P V TY+ ++ GL    +   A+ L   M   G   N+  YN +++G  K   +
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCV 639

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +   +  K  +  + TF+ +I    K+G  + AM L+  +    LVPDV  +  +
Sbjct: 640 DEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLI 699

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            + L ++G ++E   L+  M ++  TP+   +++L+  L   G I+ A
Sbjct: 700 AENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 202/432 (46%), Gaps = 24/432 (5%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCN----ENKMVEAE---SMF-RSMRECG--VVP 187
           AL LFD ++      +V+ +  L+  +       +   E+E   S+F R +REC   V P
Sbjct: 33  ALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           +  TY+ L+  +C++  +      +  +L    + N +    L+ GLC    L  A +  
Sbjct: 93  DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152

Query: 248 V-HMAKFGVFPNIFVYNCLIDGHC---KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
           V  M + G  P++  YN L+ G C   +A    E + + ++ +     P+V +Y I+I G
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
               GQ++ A  L  +M   GI  NVVTY ++IDG CK   +++A  V  QM +KGV+P+
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             T++ LI G    G     + +  EM    L PD   + +L++ L  +G  +E   L+ 
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRIS---NALNFFLEKTDKTDGGYCSPNHVLYAAII 480
            M+   I P+V     LIHG    G +S   + LN  +E          SP+H ++  I 
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG-------LSPDHHIFNIIF 385

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A      I +A  +F+ M+   L PD   Y  ++  L +  R+ D ++    M+  G+ 
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 541 PDAVINQVMVRG 552
           P+  +   +V G
Sbjct: 446 PNIFVFNSLVYG 457



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 200/423 (47%), Gaps = 29/423 (6%)

Query: 32  HHVCYSVFNA-------------LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR 76
           HH+   +F A              N ++    +P V  +  LI A  ++G +++A+  + 
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437

Query: 77  KI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG 133
           ++    V P I   N+L+ GL    K++   EFY EM+  G+  DVV +  ++   C +G
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
            VMKA  L D M   G  P V+ YT LI G C   ++ EA      M   G+ P+ +TYN
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L+ GYC+   ++ A   + EML + + P VVT+  ++ GL        A   +++M   
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAM----SLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           G   NI++YN +++G  K   + EA     SLCS+  + EI+    T+NI+I  L   G+
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEIT----TFNIMIGALFKSGR 673

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            E A  L   +   G++ +V TY  + +   +EG +E+   + S M + G  PN    ++
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL---YKEML 426
           L+      G+I  A     ++  K+   +      LI  LS+D        L   Y+ + 
Sbjct: 734 LVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLN 793

Query: 427 EAK 429
           EAK
Sbjct: 794 EAK 796



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 186/397 (46%), Gaps = 3/397 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+ +  A+++   I+EA+ ++ K++   + P +    AL++ L K G+ D     + +M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  ++  +  L+   C      KA   + EM+++GI P VV +  ++  LC + ++
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           ++A+ +   M   G  P + +Y  L+ G+C V  ++ A +    ML   L+P+  T+  L
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C+ G +  A   F  M + G+ P +  Y+ ++ G        EA  L   M     
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +++ YNI++ GL     ++ A  L Q +  +     + T+N +I    K G  E A+ 
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + ++  G+ P+V T+  + +   + G ++    L++ M      P+  +  AL+  L 
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             G++        ++ E   +    T + LI  L ++
Sbjct: 740 HRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRD 776



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 8/275 (2%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +++PD  TY+ILI   C +G+LE        + K G   N +  N L+ G C    + +A
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 349 LSV-CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI---KSLVPDVVVFTA 404
           + +   +M E G  P+VV++++L+ G C     + A+ L   M     +S  P+VV +  
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I+G   +G + +   L+ EM++  I P+V T +++I GL K   +  A   F +  DK 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 P++  Y  +I      G+  +  ++  +M +  L+PD  TY ++L  L    R 
Sbjct: 269 ----VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +   L   MI+ GI P+  I  +++ GY   G L
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM- 528
           +P+   Y+ +I   C  G++      F  +     R +N     +L+GL  AKR+ + M 
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           +L+  M ++G  PD V    +++G+      + A      + +S+
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 267/505 (52%), Gaps = 14/505 (2%)

Query: 20   DVTENLLKSRKPHHVCYSVFNALNSLEIPKFN---PSV--FSTLIIAFSEMGHIEEALWV 74
            ++T N L S   H+    V  A+  LE+ K +   P+V  ++TL+    + G ++EA+ +
Sbjct: 528  EITYNTLMSAFIHN--GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSL 585

Query: 75   YRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
             R++E     P++   ++L+    K+ + +     ++EMV  G VADV TY ++I+C C 
Sbjct: 586  LREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCK 645

Query: 132  QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
              DV +AL++F  M ++G+EP +  Y  L+  L  + K+  A  +F  ++E  +VP+ + 
Sbjct: 646  SDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV 705

Query: 192  YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
            YN +++G  K   V+ A +    M + N+ P++ T+  L+DGL K G L  A N F  M 
Sbjct: 706  YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
            + G  P++  Y  L+D   K G L  A+ +   M K    PDV TY+ LI  L   G++E
Sbjct: 766  EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             A    +    +G   NV  Y+SLID + K+G +++AL +  +M  +   PN+VT+++L+
Sbjct: 826  EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
             G  KAG ++ A  L  EM     VPD+V +  LIDG+ K G + E    +K M E  I 
Sbjct: 886  SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P V T +SLI  L K  ++  A   F    ++   GY +P+ V Y  +I  L   G++ +
Sbjct: 946  PDVITFTSLIESLGKVDKLLEACELFDSMEEE---GY-NPSVVTYNVLIDILGRAGKVHE 1001

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLR 516
            A+ +F +M+     PD  T   M R
Sbjct: 1002 AAMIFHEMKVKGCMPDGITIGIMKR 1026



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 261/511 (51%), Gaps = 7/511 (1%)

Query: 44   SLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKF 100
            SL         ++TL+ AF   GH++EA   L V +K E +P +     L++GL K G+ 
Sbjct: 520  SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRL 579

Query: 101  DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
            D       EM   G    VVTY  L+     +    ++L+LFDEM+ KG    V  Y+++
Sbjct: 580  DEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639

Query: 161  IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
            I+ LC  + + +A  +F  M+E G+ P L  Y  L+    K   ++ AL+ ++E+   +L
Sbjct: 640  INCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699

Query: 221  QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             P+   + ++++GL K   +  A      M    + P++F Y  L+DG  K+G L EA +
Sbjct: 700  VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759

Query: 281  LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
            + ++M +    PDV  Y  L+  L   G+L  A  + + M K+  + +VVTY+SLID   
Sbjct: 760  MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLG 819

Query: 341  KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
            KEG +E+A         KG  PNV  +SSLID   K G +D A+ L+ EM  +   P++V
Sbjct: 820  KEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIV 879

Query: 401  VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
             +  L+ GL+K G +    +L +EM +    P + T + LI G+ K G +  A ++F   
Sbjct: 880  TYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRM 939

Query: 461  TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             +K       P+ + + ++I++L    ++L+A +LF  M  +   P   TY  ++  L R
Sbjct: 940  KEKG----IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995

Query: 521  AKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            A ++ +  M+  +M   G +PD +   +M R
Sbjct: 996  AGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 287/621 (46%), Gaps = 79/621 (12%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE--- 79
           L+KS      C   FN + +L   + +P+V  ++TL+   ++ G +EEA  V+ +++   
Sbjct: 332 LVKSGNIDEAC-KFFNGMKNL---RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN 387

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P   A N L++GL K G+ D     ++EM   GLV ++ TY ++I      G   +A 
Sbjct: 388 CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--------------- 184
            LF ++ ++G  P V  Y  LI  L    +M +  ++ + M E G               
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEG 507

Query: 185 ---------VVPNL-------YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
                      P+L        TYN LM  +     V+ A++    M  H   P VVT+ 
Sbjct: 508 TIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYT 567

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+DGL K G L  A +    M K G  P++  Y+ L+    K     E++SL  EM + 
Sbjct: 568 TLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG------------------------ 324
               DV TY+++I  LC    ++ A  +  +M +EG                        
Sbjct: 628 GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFA 687

Query: 325 -----------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
                      ++ +   YN +++G  K   +++A  +   M  + + P++ T++SL+DG
Sbjct: 688 LQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDG 747

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K+G ++ A  ++T+M  +   PDVV +T+L+D L K G +   L +++ M + +  P 
Sbjct: 748 LGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPD 807

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T SSLI  L K GR+  A  FF     K     C+PN  +Y+++I +    G + +A 
Sbjct: 808 VVTYSSLIDSLGKEGRVEEAYYFFENSISKG----CTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF +M+     P+  TY  +L GL +A R+     LL +M K+G VPD V   +++ G 
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            + G +  A    + +KE  I
Sbjct: 924 GKMGMVDEAESYFKRMKEKGI 944



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 255/528 (48%), Gaps = 38/528 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    + G   EA  ++  ++    +P +   N L++ L K G+ D V    
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485

Query: 108 EEMVL----CGLVADV---------------------------VTYGVLIDCCCGQGDVM 136
           +EMV     C +  D                            +TY  L+      G V 
Sbjct: 486 KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ L + M      PTVV YT L+ GL    ++ EA S+ R M + G  P++ TY++LM
Sbjct: 546 EAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
             + K      +L  + EM+      +V T+ ++++ LCK  ++  A + F  M + G+ 
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P +  Y  L+    K   +  A+ + +E+++  + PD F YNI++ GL    +++ A  L
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  M  + IL ++ TY SL+DG  K G +E+A ++ ++MTE+G EP+VV ++SL+D   K
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +  A+ ++  M  K  VPDVV +++LID L K+G ++E    ++  +    TP+V  
Sbjct: 786 GGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGV 845

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SSLI    K G +  AL  F E   +     C PN V Y  ++  L   G++  A KL 
Sbjct: 846 YSSLIDSFGKKGMVDRALELFEEMQRRQ----CPPNIVTYNNLLSGLAKAGRLNVAEKLL 901

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +M      PD  TY  ++ G+ +   + +       M + GIVPD +
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI 949



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 258/544 (47%), Gaps = 38/544 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           + ++L+  F    ++  AL ++ +++     P+    N +L  L+K G + S    + ++
Sbjct: 219 LLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL 278

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D  T+ + +      G +  A     EMI  GI+P V  +T+LI  L     +
Sbjct: 279 GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNI 338

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA   F  M+     PN+ TY  L++G  K   +  A E + EM  +N  P+ + +  L
Sbjct: 339 DEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K GE   A   F  M   G+ PN+  YN +I    KAG   EA  L  ++++   
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG---ILAN------------------- 328
            PDVFTYN LI  L   GQ++    ++++M ++G   I++                    
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518

Query: 329 ---------VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
                     +TYN+L+  +   G +++A+ +   M +    P VVT+++L+DG  KAG 
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A+ L  EM  +   P VV +++L+    K    +E+L L+ EM+       V T S 
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I+ L K+  +  AL+ F     K +G    P    Y  ++ +L  D +I  A ++F+++
Sbjct: 639 VINCLCKSDDVDQALDVFGRM--KEEG--MEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +  +L PD   Y  M+ GL+++ R+ +   L+  M    I+PD      ++ G  ++G L
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 560 KSAF 563
           + AF
Sbjct: 755 EEAF 758



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 212/453 (46%), Gaps = 17/453 (3%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    V TY ++I    G  +    + +   M  +G   ++ + T L+    + N +  A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M+  G  P+   YN +++   K    + A+  + ++    +QP+  TF + +  
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
             + G L  A      M K G+ P +  +  LID   K+GN+ EA    + M+    SP+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TY  L+ GL   G+LE A  +  +M +     + + YN+LIDG  K G+ + A  +  
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M ++G+ PN+ T++ +I    KAG    A  L+ ++  +  VPDV  +  LID L K G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT----DGGYC 469
            M + L + KEM+E      +   S+  H     G I  A        D+T      G+ 
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGH----EGTIEGA--------DRTVEYPSLGFK 524

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           S   + Y  ++ A  ++G + +A KL   M+     P   TYTT++ GL +A R+ + + 
Sbjct: 525 SLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVS 584

Query: 530 LLADMIKMGIVPDAVI-NQVMVRGYQENGDLKS 561
           LL +M K G  P  V  + +M   Y+ + + +S
Sbjct: 585 LLREMEKQGCEPSVVTYSSLMASFYKRDQEEES 617


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 269/600 (44%), Gaps = 81/600 (13%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           + VF+ + ++     + ++ + ++    +   ++EA  V+ ++E     P   A N +++
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL K G      +  + M+    V   VTYG+L++  C  G + +A  LF  M   G  P
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             VIYT LIHG     +M EA S+F  M E G  P++ T+  ++DG CK  +  +A + +
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM+    +PNVVT+  ++ GL K+G +  A      M   G FP+   Y CL+DG CK 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE------------GAEGL---- 316
           G L EA  L  E++K   SP++  Y+ L+KGLC  G +E             AE L    
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL 508

Query: 317 --------------------LQKMYKEGILANVVTYNSLIDGYCK--EGDMEKALSVCSQ 354
                                Q+M  EG   +  TYN LI+G C+  E  +E+A ++   
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +   G  P+ VT++ L  G CK G +D A+ +  E   +    DVV +TAL  GL   G 
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +   + L++EM+     P       +I+GL K  ++ +A  FF E   K       P   
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQ----KPTVA 684

Query: 475 LYAAIIQALCYDGQI---------------------------------LK---ASKLFSD 498
            Y A++QALC+ G +                                 LK   A KLF D
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M S    P   T  ++  GL+R+ +      LL +M   G  P A     ++ G +++ +
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 241/519 (46%), Gaps = 15/519 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACN-ALLNGLIKKGKFDSVWEFYEE 109
            F  L+    + G  E+A  V+ ++  +   P  +A + A++  L+K  +     E + +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M  CG   D + Y  +ID     G   +AL + D M+ K   PT V Y IL++ LC    
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  AE +FR M   G  PN   Y +L+ G+ K   +  A   + EM+    +P+V+T  V
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DGLCK G    A   F  M + G  PN+  Y  +I G  K G +  A  +   M    
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD  TY  L+ G C +G+L+ A  LL ++ K     N+  Y+SL+ G C  G +E  L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 350 SVC---SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
                 S+   + ++P +    S+I G CK G +D A  ++  MV +   PD   +  LI
Sbjct: 491 DDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 407 DGL--SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +GL  S++  ++    L  ++      P   T + L  GL K G +  A+    E + + 
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR- 607

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G+ + + V Y A+   LCY GQ+ +A  LF +M      PD   Y  ++ GL++ K++
Sbjct: 608 --GW-NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            D      +MI  G  P       +V+     G++  AF
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 234/515 (45%), Gaps = 45/515 (8%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A+L  L   G   S + +  E    G   DV TY  L++    + +  +   + +EM+  
Sbjct: 91  AVLRSLKVTGTAISFFRWAGEQA--GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P    + ILI       +  +A + F  M+     P+L+T+  L+D  CK     +A
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 209 LEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            E +HEM+    + P+      ++  L K   ++ A   F  M K G  P+   YN +ID
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  KAG+  EA+ +   M      P   TY IL+  LC  G LE AE L + M   G   
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N V Y SLI G+ K G M++A S+  +M E G  P+V+T + +IDG CK+GN + A   +
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+     P+VV +T +I GLSK G +    R+ K M+     P   T   L+ G  K 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYA------------------------------ 477
           GR+  A        D+ D    SPN  LY+                              
Sbjct: 449 GRLDEAAQLL----DELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504

Query: 478 ------AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK--RMLDVMM 529
                 +II  LC  G++ +A ++F  M S+  +PD  TY  ++ GL R++  R+     
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LL D+  +G +PDAV    +  G  + G++  A +
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 227/490 (46%), Gaps = 8/490 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K  + P   + N L+    +  + D     +E M       D+ T+ +L+DC C  G   
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206

Query: 137 KALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           KA  +F EM+  G + P   ++T ++  L    ++ EA  +F  M +CG  P+   YN +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG  K      AL+    ML     P  VT+G+L++ LCK G L  A   F  MA  G 
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI G  K+G + EA SL  EM +    PDV T+ ++I GLC  G  E A  
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             ++M + G   NVVTY ++I G  K G +  A  +   M   G  P+ VT+  L+DG C
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL-RLYKEMLEAKITPSV 434
           K G +D A  L  E+   S  P++ ++++L+ GL   G+++ TL  L+++   A      
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP 506

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC--YDGQILKA 492
               S+I GL K GR+  A   F     +     C P+   Y  +I  LC   + ++ +A
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEG----CKPDATTYNILINGLCRSRENRVERA 562

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  D+      PD  TYT +  GL +   +   + +L +    G   D V    +  G
Sbjct: 563 FALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622

Query: 553 YQENGDLKSA 562
               G +  A
Sbjct: 623 LCYQGQVDRA 632



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 5/283 (1%)

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+     DVFTYN L+  L           + ++M K GI  N  ++N LI  + +    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTA 404
           + A++    M  K  +P++ TF  L+D  CKAG  + A  ++ EM+    VP D  + TA
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++  L K   +KE   ++ +M +    P     +++I GL K G    AL       D  
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL----DNM 286

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C P  V Y  ++ +LC  G + +A +LF  M +   RP++  YT+++ G  ++ RM
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            +   L  +M++ G  PD + + VM+ G  ++G+ + A +  E
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 235/470 (50%), Gaps = 8/470 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N+L+ G  +  + D   + +++M L G   DVV+Y  LI+  C  G + +A+ L
Sbjct: 44  PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVEL 103

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM     +P + +Y  L+ GLC   +  E   M R M+E G  P+   Y A++D  C 
Sbjct: 104 FGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCW 159

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A E   EM    L P VVT   +++  CK G +  A      M   G  PN++ 
Sbjct: 160 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 219

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G C  G + +AM+L ++M    ++PD  TYN+LI+G C  G +E A  LL+ M 
Sbjct: 220 YNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 279

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G++A+  TYN+LI+  CK+G  ++A S+   +  +G++PN VTF+SLI+G CK+G +D
Sbjct: 280 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVD 339

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A     +MV     PD   +++ I+ L K    +E L    EML+  + PS    + +I
Sbjct: 340 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           H L K          + E         C+P+ V Y   ++A C +G++ +A  +  +M  
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSG----CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 455

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + +  D   Y T++ G     +    + +L  M  +  VP+     +++R
Sbjct: 456 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 211/442 (47%), Gaps = 8/442 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY  +I   C + D+  AL     M+  G  P    +  LI G C  N++  A  +F  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G   ++ +Y AL++G+C+   ++ A+E + EM     QP++  +  L+ GLCK G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
                    M + G  P+   Y  ++D  C      EA  +  EM +  ++P V T   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I   C  G++  A  +L+ M   G   NV TYN+L+ G+C EG + KA+++ ++M   GV
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ VT++ LI GQC  G+I++A  L   M    L+ D   + ALI+ L KDG   +   
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+  +    I P+  T +SLI+GL K+G++  A  F     +K     C+P+   Y++ I
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL----EKMVSAGCTPDTYTYSSFI 364

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           + LC      +      +M   +++P    YT ++  LL+ +    V     +M+  G  
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 424

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           PD V     +R Y   G L  A
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEA 446



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 242/527 (45%), Gaps = 24/527 (4%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           E+ + +  +++ L+    + G  EE L + R+++ L   P+ +A  A+++    + K   
Sbjct: 106 EMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKE 165

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             E  +EM   GL   VVT   +I+  C +G +  AL + + M  +G +P V  Y  L+ 
Sbjct: 166 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 225

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G CNE K+ +A ++   MR CGV P+  TYN L+ G C    +  A      M    L  
Sbjct: 226 GFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 285

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +  T+  L++ LCK G    A + F  +   G+ PN   +N LI+G CK+G +  A    
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL 345

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +M     +PD +TY+  I+ LC +   +     + +M ++ +  + V Y  +I    KE
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
            +         +M   G  P+VVT+++ +   C  G ++ A  +  EM    +  D + +
Sbjct: 406 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 465

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH-----------------GLF 445
             L+DG +  G     + + K+M      P+ FT   L+                  G++
Sbjct: 466 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 525

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K   +++    F    D        PN   Y++I++    DG+  +A+ L S M+ D++ 
Sbjct: 526 KAIELTDVFGLF----DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +   YT ++    ++KR LD  +L+  MI+ G +P  +  Q ++ G
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSG 628



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 221/491 (45%), Gaps = 56/491 (11%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C A++N   K+G+        E M L G   +V TY  L+   C +G V KA+ L
Sbjct: 180 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMAL 239

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++M   G+ P  V Y +LI G C +  +  A  + R M   G++ + YTYNAL++  CK
Sbjct: 240 LNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               ++A   +  +    ++PN VTF  L++GLCK G++  A  F   M   G  P+ + 
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYT 359

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEI------------------------------- 290
           Y+  I+  CK     E +S   EM + ++                               
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 419

Query: 291 ----SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PDV TY   ++  C  G+L  AE +L +M K G+  + + YN+L+DG+   G  +
Sbjct: 420 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 479

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLID-----------------GQCKAGNIDAAMGLYTE 389
            A+S+  QMT     PN  T+  L+                  G  KA  +    GL+  
Sbjct: 480 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 539

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M     +P+   ++++++G S+DG  +E   L   M E  I+ +    ++L+    K+ R
Sbjct: 540 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKR 599

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
               L+ ++        G+  P+ + Y  ++  L  +GQ  KA ++F + R  +  PD  
Sbjct: 600 Y---LDAWVLVCSMIQHGFI-PHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 655

Query: 510 TYTTMLRGLLR 520
            +  ++ GL++
Sbjct: 656 VWKVIIDGLIK 666



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 215/506 (42%), Gaps = 68/506 (13%)

Query: 40  NALNSLEIPKFN---PSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +AL  LE+ K     P+V++   L+  F   G + +A+ +  K+ V    P     N L+
Sbjct: 200 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLI 259

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G    G  +S +     M   GL+AD  TY  LI+  C  G   +A +LFD +  +GI+
Sbjct: 260 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 319

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V +  LI+GLC   K+  A      M   G  P+ YTY++ ++  CK+      L F
Sbjct: 320 PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 379

Query: 212 YHEMLHHNLQP-----------------------------------NVVTFGVLMDGLCK 236
             EML  +++P                                   +VVT+   M   C 
Sbjct: 380 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 439

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G L  A N  + M+K GV  +   YN L+DGH   G    A+S+  +M      P+ FT
Sbjct: 440 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 499

Query: 297 YNILIK-----------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           Y IL++                 G+    +L    GL   M K   L N  TY+S+++G+
Sbjct: 500 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 559

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            ++G  E+A S+ S M E  +  N   +++L+   CK+     A  L   M+    +P +
Sbjct: 560 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHL 619

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR--ISNALNFF 457
           + +  L+ GL  +G   +   ++        +P       +I GL K G   IS  +   
Sbjct: 620 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 679

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQAL 483
           LE+ +      C P+H  YA + + L
Sbjct: 680 LERMN------CRPSHQTYAMLTEEL 699



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 177/375 (47%), Gaps = 11/375 (2%)

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           H    P   T+  ++  LC+  +L +A  +   M + G  P+ + +N LI G+C+   + 
Sbjct: 4   HAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVD 63

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L  +M     + DV +Y  LI+G C  G+++ A  L  +M +     ++  Y +L+
Sbjct: 64  VARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALV 119

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G CK G  E+ L +  +M E G  P+   +++++D +C       A  +  EM  K L 
Sbjct: 120 KGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLA 179

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P VV  TA+I+   K+G M + LR+ + M      P+V+T ++L+ G    G++  A+  
Sbjct: 180 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMAL 239

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                +K      +P+ V Y  +I+  C DG I  A +L   M  D L  D  TY  ++ 
Sbjct: 240 L----NKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALIN 295

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
            L +  R      L   +   GI P+AV    ++ G  ++G +  A++   FL++     
Sbjct: 296 ALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWK---FLEKMVSAG 352

Query: 577 SETEGHTTRSFLGHL 591
              + +T  SF+ HL
Sbjct: 353 CTPDTYTYSSFIEHL 367


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 239/427 (55%), Gaps = 5/427 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++   +M  KGI+P +  + ILI+   +  ++  A SM   + + G  P+  T N L+ 
Sbjct: 72  AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVF 256
           G C    V  AL F+  ++      + V++G L++GLCK GE RAA      +     V 
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR 191

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++ +Y  +ID  CK   + +A  L SEM   +I P+V T+N LI G C VGQL+ A GL
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L +M    +  NV T+N LIDG CKEG+++KA SV S M ++GVEPNVVT++SL+DG   
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              ++ A  ++  + ++ + P+V  ++ +I+GL K+  + E ++L+KEM    +TP+  T
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SSLI GL K+GRIS+  +   E  ++        N + Y +++  LC + Q+ KA  L 
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPA----NIITYNSLLNGLCKNHQVDKAIALL 427

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           + M+ + ++PD  TYTT++ GL +  R+ D   +  D++  G   +  +  VM+ G  + 
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487

Query: 557 GDLKSAF 563
           G    A 
Sbjct: 488 GFFDEAL 494



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 256/481 (53%), Gaps = 29/481 (6%)

Query: 44  SLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+    P +F+   LI  FS +  +  A  +  KI  L   P     N LL GL   G
Sbjct: 78  QMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNG 137

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG---IEPTVV 155
           K      F++ ++      D V+YG LI+  C  G+   AL L  ++  +G   + P V+
Sbjct: 138 KVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVI 195

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +YT +I   C +  +++A  ++  M    + PN+ T+N+L+ G+C V  +  A+   +EM
Sbjct: 196 MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC----- 270
             +N+ PNV TF +L+DGLCK GE++ A +    M K GV PN+  Y  L+DG+      
Sbjct: 256 SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEV 315

Query: 271 -KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            KA ++F  +SL        ++P+V +Y+++I GLC    ++ A  L ++M+ + +  N 
Sbjct: 316 NKAKHVFNTISLRG------VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY+SLIDG CK G +     +  ++  +G   N++T++SL++G CK   +D A+ L T+
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + + PD+  +T L+DGL K+G +K+  R+Y+++L      ++   + +I+GL K G 
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
              AL+   +  D      C P+ V Y  +I AL  + +  KA KL  +M +   R  +C
Sbjct: 490 FDEALSLLSQMEDNG----CMPDAVTYETLISALFKNNKNGKAVKLLREMIA---RESDC 542

Query: 510 T 510
           +
Sbjct: 543 S 543



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 257/505 (50%), Gaps = 12/505 (2%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +  L +    P +F  + ++ +  +M H + A+   +++E   + P +   N L+
Sbjct: 38  SSFNHI--LHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILI 95

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N      + +  +    +++  G   D VT   L+   C  G V +ALN  D +I K   
Sbjct: 96  NCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFH 155

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVADVNRALE 210
              V Y  LI+GLC   +   A  + R +    +V P++  Y A++D +CK   V  A +
Sbjct: 156 LDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYD 215

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            Y EM+   + PNVVTF  L+ G C VG+L+ A      M+   V PN++ +N LIDG C
Sbjct: 216 LYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLC 275

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G + +A S+ S M K  + P+V TY  L+ G   V ++  A+ +   +   G+  NV 
Sbjct: 276 KEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVH 335

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +Y+ +I+G CK   +++A+ +  +M  K + PN VT+SSLIDG CK+G I     L  E+
Sbjct: 336 SYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEI 395

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             +    +++ + +L++GL K+  + + + L  +M +  I P + T ++L+ GL KNGR+
Sbjct: 396 NNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRL 455

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A   +    D    GY   N  +Y  +I  LC +G   +A  L S M  +   PD  T
Sbjct: 456 KDAQRIY---QDLLCKGY-PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMI 535
           Y T++  L +  +    + LL +MI
Sbjct: 512 YETLISALFKNNKNGKAVKLLREMI 536



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 201/417 (48%), Gaps = 44/417 (10%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P ++ +N ++    K+     A+ F  +M    +QP + TF +L++    + +L  A +
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               + K G  P+    N L+ G C  G + EA++    + +     D  +Y  LI GLC
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169

Query: 306 GVGQLEGAEGLLQKMYKEGIL---ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
             G+   A  LL+K+  EG+L    +V+ Y ++ID +CK+  +  A  + S+M  K + P
Sbjct: 170 KSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           NVVTF+SLI G C  G +  A+GL  EM + ++ P+V  F  LIDGL K+G +K+   + 
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M++  + P+V T +SL+ G F    ++ A + F   T    G   +PN   Y+ +I  
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVF--NTISLRG--VTPNVHSYSVMING 343

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV--------------- 527
           LC +  + +A KLF +M   N+ P+  TY++++ GL ++ R+ DV               
Sbjct: 344 LCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPAN 403

Query: 528 --------------------MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                               + LL  M   GI PD      +V G  +NG LK A R
Sbjct: 404 IITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQR 460



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 165/324 (50%), Gaps = 7/324 (2%)

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
           ++ N  +HM      P IF +N ++    K  +   A+S   +ME   I P++FT+NILI
Sbjct: 38  SSFNHILHMNNHT--PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILI 95

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
                + QL  A  ++ K+ K G   + VT N+L+ G C  G +++AL+    +  K   
Sbjct: 96  NCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFH 155

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLR 420
            + V++ +LI+G CK+G   AA+ L  ++    LV PDV+++TA+ID   KD  + +   
Sbjct: 156 LDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYD 215

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           LY EM+  KI P+V T +SLI+G    G++  A+    E +        +PN   +  +I
Sbjct: 216 LYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN----VNPNVYTFNILI 271

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC +G++ KA+ + S M    + P+  TYT+++ G    K +     +   +   G+ 
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVT 331

Query: 541 PDAVINQVMVRGYQENGDLKSAFR 564
           P+     VM+ G  +N  +  A +
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVK 355


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 238/463 (51%), Gaps = 4/463 (0%)

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +++  G   D VT+  LI+  C +G V +AL L D M++ G +PT++    L++GLC   
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ +A  +   M E G  PN  TY  ++   CK      A+E   +M    ++ + V + 
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++DGLCK G L  A N F  M   G   +I +Y  LI G C AG   +   L  +M K 
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +I+PDV  ++ LI      G+L  AE L ++M + GI  + VTY SLIDG+CKE  ++KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M  KG  PN+ TF+ LI+G CKA  ID  + L+ +M ++ +V D V +  LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G ++    L++EM+  ++ P + +   L+ GL  NG    AL  F EK +K+    
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSK--- 487

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              +  +Y  II  +C   ++  A  LF  +    ++PD  TY  M+ GL +   + +  
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L   M + G  P+     +++R +   GD   + +  E +K 
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 266/574 (46%), Gaps = 60/574 (10%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNG 93
           F+A+  +    + P    FSTLI      G + EAL  V R +E+   P +   NAL+NG
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYG------------------------------ 123
           L   GK        + MV  G   + VTYG                              
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246

Query: 124 -----VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                ++ID  C  G +  A NLF+EM  KG +  ++IYT LI G C   +  +   + R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M +  + P++  ++AL+D + K   +  A E + EM+   + P+ VT+  L+DG CK  
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A +    M   G  PNI  +N LI+G+CKA  + + + L  +M    +  D  TYN
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI+G C +G+LE A+ L Q+M    +  ++V+Y  L+DG C  G+ EKAL +  ++ + 
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            +E ++  ++ +I G C A  +D A  L+  + +K + PDV  +  +I GL K G++ E 
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA------------------LNFFLEK 460
             L+++M E   +P+  T + LI      G  + +                  L F L  
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALST 606

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYD--GQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             +       P+   +  +++  C +    +  A  LF +M++   +P+  TY T+++GL
Sbjct: 607 LARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           L    +  V  +L  M + G  P+AV     + G
Sbjct: 667 LNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 242/481 (50%), Gaps = 4/481 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   + L + + +  ++D V +  ++M L G+  ++ T  ++I+CCC    +  A + 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             ++I  G EP  V ++ LI+GLC E ++ EA  +   M E G  P L T NAL++G C 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+ A+     M+    QPN VT+G ++  +CK G+   A      M +  +  +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ +IDG CK G+L  A +L +EME      D+  Y  LI+G C  G+ +    LL+ M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K  I  +VV +++LID + KEG + +A  +  +M ++G+ P+ VT++SLIDG CK   +D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +   MV K   P++  F  LI+G  K   + + L L+++M    +     T ++LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G++  A   F E   +       P+ V Y  ++  LC +G+  KA ++F  +  
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRR----VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             +  D   Y  ++ G+  A ++ D   L   +   G+ PD     +M+ G  + G L  
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 562 A 562
           A
Sbjct: 546 A 546



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 252/529 (47%), Gaps = 35/529 (6%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L +AFS MG I        K+   P     + L+NGL  +G+     E  + MV  G   
Sbjct: 123 LSLAFSAMGKI-------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            ++T   L++  C  G V  A+ L D M++ G +P  V Y  ++  +C   +   A  + 
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R M E  +  +   Y+ ++DG CK   ++ A   ++EM     + +++ +  L+ G C  
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G           M K  + P++  ++ LID   K G L EA  L  EM +  ISPD  TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI G C   QL+ A  +L  M  +G   N+ T+N LI+GYCK   ++  L +  +M+ 
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +GV  + VT+++LI G C+ G ++ A  L+ EMV + + PD+V +  L+DGL  +G  ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L +++++ ++K+   +   + +IHG+    ++ +A + F     K       P+   Y 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG----VKPDVKTYN 531

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL------RAKRMLD----- 526
            +I  LC  G + +A  LF  M  D   P+ CTY  ++R  L      ++ ++++     
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591

Query: 527 -----------VMMLLADMIKMGIVPDAVINQVMVRGY--QENGDLKSA 562
                       +  LA M+K G  PD      ++R +  +EN  +  A
Sbjct: 592 GFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDA 640



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 220/440 (50%), Gaps = 29/440 (6%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALL 91
           + FN  N +EI  F   +  ++TLI  F   G  ++   + R   K ++ P + A +AL+
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +  +K+GK     E ++EM+  G+  D VTY  LID  C +  + KA ++ D M+ KG  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +  + ILI+G C  N + +   +FR M   GVV +  TYN L+ G+C++  +  A E 
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM+   ++P++V++ +L+DGLC  GE   A   F  + K  +  +I +YN +I G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A  + +A  L   +    + PDV TYNI+I GLC  G L  A+ L +KM ++G   N  T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 332 YNSLIDGYCKEGDMEK----------------------ALSVCSQMTEKGVEPNVVTFSS 369
           YN LI  +  EGD  K                      ALS  ++M + G EP+V TF++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTT 624

Query: 370 LIDGQCKAGNIDA--AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           L+   C   N     A  L+  M      P+VV +  +I GL     + +   +  +M E
Sbjct: 625 LLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFE 684

Query: 428 AKITPSVFTVSSLIHGLFKN 447
               P+  T S+ I GL K 
Sbjct: 685 RGCQPNAVTKSTFISGLCKQ 704



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF EM      P ++ ++ L   +    +      + + M   G+  NLYT + +++
Sbjct: 56  AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C+   ++ A     +++    +P+ VTF  L++GLC  G +  A      M + G  P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +   N L++G C  G + +A+ L   M +    P+  TY  ++K +C  GQ   A  LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I  + V Y+ +IDG CK+G ++ A ++ ++M  KG + +++ +++LI G C A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  D    L  +M+ + + PDVV F+ALID   K+G ++E   L+KEM++  I+P   T 
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 438 SSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +SLI G  K  ++  A   L+  + K        C PN   +  +I   C    I    +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKG-------CGPNIRTFNILINGYCKANLIDDGLE 408

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M    +  D  TY T+++G     ++     L  +M+   + PD V  ++++ G  
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG+ + A    E +++S++
Sbjct: 469 DNGEPEKALEIFEKIEKSKM 488



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 190/391 (48%), Gaps = 4/391 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F+ M      P L  ++ L     +    +  L+   +M    +  N+ T  +++
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +L  A +    + K G  P+   ++ LI+G C  G + EA+ L   M +    
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P + T N L+ GLC  G++  A  L+ +M + G   N VTY  ++   CK G    A+ +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M E+ ++ + V +S +IDG CK G++D A  L+ EM IK    D++++T LI G   
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G   +  +L ++M++ KITP V   S+LI    K G++  A     E   +      SP
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG----ISP 350

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y ++I   C + Q+ KA+ +   M S    P+  T+  ++ G  +A  + D + L 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             M   G+V D V    +++G+ E G L+ A
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 161/333 (48%), Gaps = 24/333 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I+  N L+NG  K    D   E + +M L G+VAD VTY  LI   C  G +  A  L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+ + + P +V Y IL+ GLC+  +  +A  +F  + +  +  ++  YN ++ G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            + V+ A + +  +    ++P+V T+ +++ GLCK G L  A   F  M + G  PN   
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEK-----------FEIS-----------PDVFTYNI 299
           YN LI  H   G+  ++  L  E+++           F +S           PDVFT+  
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTT 624

Query: 300 LIKGLC--GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           L++  C      +  A  L + M   G   NVVTYN++I G      + +   V  QM E
Sbjct: 625 LLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFE 684

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +G +PN VT S+ I G CK     +A+ L  +M
Sbjct: 685 RGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L Q+M +      ++ ++ L     +    +  L +C QM  KG+  N+ T S +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+  C+   +  A     +++     PD V F+ LI+GL  +G + E L L   M+E   
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 431 TPSVFTVSSLIHGLFKNGRISNAL-------------------------------NFFLE 459
            P++ T+++L++GL  NG++S+A+                                  +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              K +      + V Y+ II  LC DG +  A  LF++M     + D   YTT++RG  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A R  D   LL DMIK  I PD V    ++  + + G L+ A
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 29/267 (10%)

Query: 49  KFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSV 103
           +  P + S   L+    + G  E+AL ++ KIE       I   N +++G+    K D  
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           W+ +  + L G+  DV TY ++I   C +G + +A  LF +M + G  P    Y ILI  
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571

Query: 164 LCNENKMVEAESMFRSMRECGVV----------------------PNLYTYNALMDGYC- 200
              E    ++  +   ++ CG                        P+++T+  L+  +C 
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCL 631

Query: 201 -KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            + A V  A   +  M     +PNVVT+  ++ GL     +         M + G  PN 
Sbjct: 632 EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEME 286
              +  I G CK      A+ L  +ME
Sbjct: 692 VTKSTFISGLCKQDLHGSAILLLRKME 718


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 257/524 (49%), Gaps = 11/524 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  +EA  +  + +    +P++ A N +L  L KK + +     +EEM
Sbjct: 92  AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                V +V TY +LID  C +G +  AL + D+M   G+ P V+   I+I  LC   K+
Sbjct: 152 KR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+F  M +    PN  T+++L+DG  K   V+ A   Y +ML     P  + +  L
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K G        +  M   G  P++ + N  +D   KAG   +  +L  E+     
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y+ILI GL   G       L   M ++G + +   YN++IDG+CK G + KA  
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG  P VVT+ S+IDG  K   +D A  L+ E     +  +VVV+++LIDG  
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +E+++  +TP+V+T + L+  L K   I+ AL  F    D      C 
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK----CP 506

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y+ +I  LC   +  KA   + +M+   L+P+  TYTTM+ GL +A  +L+   L
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +     G +PD+     M+ G         A+      +E+R+
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAY---ALFEETRL 607



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 258/540 (47%), Gaps = 13/540 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           PSV  ++ ++    +   +EEAL ++   K + +P +   N L++ L ++GK ++  E  
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   GL  +V+T  ++ID  C    + +A ++F+ M DK   P  V ++ LI GL   
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A S++  M +CG VP    Y +L+  + K        + Y EM+H    P++   
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              MD + K GE       F  +   G  P+   Y+ LI G  KAG   E   L   M++
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                D   YN +I G C  G++  A  LL++M  +G    VVTY S+IDG  K   +++
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +    G++ NVV +SSLIDG  K G ID A  +  E++ K L P+V  +  L+D
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K   + E L  ++ M + K  P+  T S LI+GL +  + + A  F+ E        
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG--- 539

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN + Y  +I  L   G IL+AS LFS  +++   PD+ +Y  M+ GL  A + +D 
Sbjct: 540 -LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 598

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L  +    G         V++    +   L+ A      LKE     +    H +RSF
Sbjct: 599 YALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE-----TAKSQHASRSF 653



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 204/405 (50%), Gaps = 5/405 (1%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---E 79
           + L K++K    C S+F  ++  ++   N   FS+LI    + G +++A  +Y K+    
Sbjct: 202 DRLCKAQKLEEAC-SIFEGMDD-KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            +P      +L+    K G+ +   + Y+EMV  G   D+      +DC    G+  K  
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF E+   G  P    Y+ILIHGL       E   +F +M+E G V + + YNA++DG+
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   VN+A +   EM      P VVT+G ++DGL K+  L  A   F      G+  N+
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            VY+ LIDG  K G + EA  +  E+ +  ++P+V+T+N L+  L    ++  A    Q 
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 499

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M       N +TY+ LI+G C+     KA     +M + G++PN +T++++I G  KAGN
Sbjct: 500 MKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN 559

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           I  A GL++       +PD   + A+I+GLS      +   L++E
Sbjct: 560 ILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 202/449 (44%), Gaps = 15/449 (3%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG----------LCNENKMVEAE 174
           L+  C     + +A ++   M      P    YTILI            LC  N++ EA 
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +F  + +   VP  Y YN ++ GY      + A             P+V+ +  ++  L
Sbjct: 76  ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K   +  A   F  M +  V PN+  YN LID  C+ G L  A+ +  +ME+  + P+V
Sbjct: 136 GKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T NI+I  LC   +LE A  + + M  +    N VT++SLIDG  K G ++ A S+  +
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEK 254

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M + G  P  + ++SLI    K G  +    +Y EMV     PD+ +    +D + K G 
Sbjct: 255 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 314

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
            ++   L++E+      P   + S LIHGL K G  +     F    ++     C  +  
Sbjct: 315 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG----CVLDTH 370

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y A+I   C  G++ KA +L  +M+     P   TY +++ GL +  R+ +  ML  + 
Sbjct: 371 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 430

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
              GI  + V+   ++ G+ + G +  A+
Sbjct: 431 KSNGIKLNVVVYSSLIDGFGKVGRIDEAY 459



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 164/379 (43%), Gaps = 48/379 (12%)

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG----------HCKAGNLFEAMSLCSEM 285
           K  +LR A +    M KF   P    Y  LI             CKA  L EA+ L  ++
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG--------------------- 324
           E+    P  + YN +I G    G+ + A GLL++   +G                     
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 325 -------------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
                         + NV TYN LID  C+EG +  AL +   M   G+ PNV+T + +I
Sbjct: 142 EEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMI 201

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           D  CKA  ++ A  ++  M  K   P+ V F++LIDGL K G + +   LY++ML+    
Sbjct: 202 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 261

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P     +SLI   FK GR  +    + E         CSP+  L    +  +   G+  K
Sbjct: 262 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG----CSPDLTLINTYMDCVFKAGETEK 317

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
              LF ++ +    PD  +Y+ ++ GL++A    +   L   M + G V D      ++ 
Sbjct: 318 GRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 377

Query: 552 GYQENGDLKSAFRCSEFLK 570
           G+ ++G +  A++  E +K
Sbjct: 378 GFCKSGKVNKAYQLLEEMK 396



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 3/199 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+S+LI  F ++G I+EA  +  ++    + P +   N LL+ L+K  + +    
Sbjct: 436 KLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 495

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ M       + +TY +LI+  C      KA   + EM   G++P  + YT +I GL 
Sbjct: 496 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 555

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               ++EA  +F   +  G +P+  +YNA+++G         A   + E        +  
Sbjct: 556 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 615

Query: 226 TFGVLMDGLCKVGELRAAG 244
           T  VL+D L K   L  A 
Sbjct: 616 TCVVLLDALHKAECLEQAA 634


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 169/562 (30%), Positives = 265/562 (47%), Gaps = 42/562 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  LI  + ++G + +A+ V     K+ +   +  CN+L+NG  K G+          M
Sbjct: 174 AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCM 233

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  D  +Y  L+D  C  G   KA N+ D+M+ KGIEPTVV Y  L+ GLC     
Sbjct: 234 RKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDY 293

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  ++  M + GV PN   Y  L+DG  K+ D +RAL  + ++L   +  ++  F  +
Sbjct: 294 KDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTM 353

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK+GE+  A   F  M + G  P+   Y  L DG+CK GN+ EA  +  +MEK EI
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI 413

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P +  YN LI GL    ++     LL +M   G+  NVVTY +LI G+C +G ++KA S
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV------------------- 391
              +M  KG  PNV+  S ++    + G ID A  L  +MV                   
Sbjct: 474 AYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADI 533

Query: 392 ----------------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                           IK  +P+ VV+   + GL K G + +  R +  +     TP  F
Sbjct: 534 RKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNF 593

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T  +LIHG    G ++ A N   E  +K       PN   Y A++  LC  G + +A +L
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKG----LVPNITTYNALLNGLCKSGYLDRARRL 649

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +    L P+  TY  ++ G  ++    + + L   M+K GI P  +    ++ G+ +
Sbjct: 650 FDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCK 709

Query: 556 NGDLKSAFRCSEFLKESRIGSS 577
             D++ A +    +K S +  +
Sbjct: 710 QSDVEEAMKLLNEMKASNVDQT 731



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 278/558 (49%), Gaps = 50/558 (8%)

Query: 58  LIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++  ++E G ++ AL V+    K    P++++CN+LL+ L+K+G+  S    Y++M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY----------------- 157
           +V DV T  ++++  C  G V +A+    EM   G E   V Y                 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 158 ------------------TILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDG 198
                             T+LI G C + K+ EAE + R M +E GVV + Y Y AL+DG
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCKV  +  A+    EML   L+ N+     L++G CK G++       + M K  + P+
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            + Y  L+DG+C+ G   +A ++C +M +  I P V TYN L+KGLC  G  + A  L  
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M + G+  N V Y +L+DG  K GD  +AL++   +  +G+  ++  F+++I+G CK G
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A   +  M      PD + +  L DG  K GN++E  ++ ++M + +I PS+   +
Sbjct: 362 EMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYN 421

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SLI GLF + +IS  ++   E     D    SPN V Y A+I   C  G++ KA   + +
Sbjct: 422 SLIVGLFTSKKISKLIDLLAE----MDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE 477

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M      P+    + ++  L R  R+ +  MLL  M+      D V++   +  +Q N D
Sbjct: 478 MIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF----DLVLDHRCLEDFQ-NAD 532

Query: 559 LK--SAFRCSEFLKESRI 574
           ++    ++ ++ L ES I
Sbjct: 533 IRKLDCWKIADTLDESAI 550



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 270/552 (48%), Gaps = 37/552 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   +++L+  +  +G IE A  V + +    V+        L+ G  K+ K +   +
Sbjct: 98  ELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEK 157

Query: 106 FYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              EM    G+V D   YG LID  C  G +  A+ + DEM+  G++  + +   LI+G 
Sbjct: 158 VLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGY 217

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   ++ E E +   MR+  + P+ Y+Y  L+DGYC+    ++A     +ML   ++P V
Sbjct: 218 CKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTV 277

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ GLC+ G+ + A   +  M + GV PN   Y  L+DG  K G+   A++L  +
Sbjct: 278 VTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDD 337

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +    I+  ++ +N +I GLC +G+++GA+   ++M + G   + +TY +L DGYCK G+
Sbjct: 338 ILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGN 397

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E+A  +  +M ++ + P++  ++SLI G   +  I   + L  EM  + L P+VV + A
Sbjct: 398 VEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGA 457

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT--- 461
           LI G    G + +    Y EM+     P+V   S ++  L++ GRI  A N  L+K    
Sbjct: 458 LIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA-NMLLQKMVDF 516

Query: 462 -----------------------------DKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
                                        D++   +  PN+V+Y   +  LC  G++  A
Sbjct: 517 DLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDA 576

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + F  +   +  PDN TY T++ G   A  + +   L  +M+  G+VP+      ++ G
Sbjct: 577 RRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNG 636

Query: 553 YQENGDLKSAFR 564
             ++G L  A R
Sbjct: 637 LCKSGYLDRARR 648



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 213/403 (52%), Gaps = 8/403 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TL   + ++G++EEA  +  K+E     P+I+  N+L+ GL    K   + +   EM
Sbjct: 384 TYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEM 443

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +VVTYG LI   C QG + KA + + EMI KG  P V+I + ++  L    ++
Sbjct: 444 DTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRI 503

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + + M +  +V +        +   +  D  +  +   E       PN V + + 
Sbjct: 504 DEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIA 563

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M GLCK G++  A  FF+ ++     P+ F Y  LI G   AG + EA +L  EM    +
Sbjct: 564 MAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGL 623

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ TYN L+ GLC  G L+ A  L  K++ +G++ NVVTYN LIDGYCK G   +AL 
Sbjct: 624 VPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALD 683

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++G+ P+++T+SSLI+G CK  +++ AM L  EM   ++   +  F+ L++G  
Sbjct: 684 LRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCI 743

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           + G++K+  +L+  M  A   PS    S   H   +   +SNA
Sbjct: 744 QHGDVKKMSKLHNMMHMA--CPSAGITS---HKQMELSELSNA 781



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 232/517 (44%), Gaps = 77/517 (14%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N LL GL + G +      +  M+  G+  + V Y  L+D     GD  +AL L
Sbjct: 275 PTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTL 334

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           +D+++ +GI  ++  +  +I+GLC   +M  A+  F+ M E G  P+  TY  L DGYCK
Sbjct: 335 WDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCK 394

Query: 202 VADVNRA---------------LEFYH--------------------EMLHHNLQPNVVT 226
           V +V  A               +E Y+                    EM    L PNVVT
Sbjct: 395 VGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVT 454

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +G L+ G C  G L  A + +  M   G  PN+ + + ++    + G + EA  L  +M 
Sbjct: 455 YGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 514

Query: 287 KFEIS-----------------------------------PDVFTYNILIKGLCGVGQLE 311
            F++                                    P+   YNI + GLC  G++ 
Sbjct: 515 DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A      +       +  TY +LI G+   G + +A ++  +M  KG+ PN+ T+++L+
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G CK+G +D A  L+ ++ +K L+P+VV +  LIDG  K G+ +E L L  +ML+  I+
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS 694

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           PS+ T SSLI+G  K   +  A+    E K    D    +     ++ +++     G + 
Sbjct: 695 PSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIAT-----FSKLVEGCIQHGDVK 749

Query: 491 KASKLFSDMRSDNLRPDNCTYTTM-LRGLLRAKRMLD 526
           K SKL + M          ++  M L  L  AK MLD
Sbjct: 750 KMSKLHNMMHMACPSAGITSHKQMELSELSNAKEMLD 786



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 38/438 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + TL+    +MG    AL ++  I    +  +I A N ++NGL K G+ D   E +
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETF 370

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G   D +TY  L D  C  G+V +A  + ++M  + I P++ +Y  LI GL   
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTS 430

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +   +   M   G+ PN+ TY AL+ G+C    +++A   Y EM+     PNV+  
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIIC 490

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGV-------------------------------- 255
             ++  L ++G +  A      M  F +                                
Sbjct: 491 SKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAI 550

Query: 256 ---FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               PN  VYN  + G CK+G + +A      +     +PD FTY  LI G    G +  
Sbjct: 551 KFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNE 610

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L  +M  +G++ N+ TYN+L++G CK G +++A  +  ++  KG+ PNVVT++ LID
Sbjct: 611 AFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILID 670

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+G+   A+ L  +M+ + + P ++ +++LI+G  K  +++E ++L  EM  + +  
Sbjct: 671 GYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQ 730

Query: 433 SVFTVSSLIHGLFKNGRI 450
           ++ T S L+ G  ++G +
Sbjct: 731 TIATFSKLVEGCIQHGDV 748



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 40/338 (11%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           + + L  ++    +P+V  +  LI  + + G +++A   Y ++      P +  C+ +++
Sbjct: 436 LIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVS 495

Query: 93  GLIKKGKFDSVWEFYEEMVL----------------------CGLVADV----------- 119
            L + G+ D      ++MV                       C  +AD            
Sbjct: 496 SLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLP 555

Query: 120 --VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
             V Y + +   C  G V  A   F  +      P    Y  LIHG      + EA ++ 
Sbjct: 556 NNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLR 615

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+VPN+ TYNAL++G CK   ++RA   + ++    L PNVVT+ +L+DG CK 
Sbjct: 616 DEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKS 675

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G  R A +    M K G+ P+I  Y+ LI+G CK  ++ EAM L +EM+   +   + T+
Sbjct: 676 GSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATF 735

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           + L++G    G ++    L   M+     A + ++  +
Sbjct: 736 SKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQM 773



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 34/304 (11%)

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G ++ A  +   M K G   ++ + NSL+    K G+   A+ V  QM    + P+V T 
Sbjct: 10  GMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTC 69

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + +++  CKAG ++ A+    EM       + V + +L+DG    G+++    + K M E
Sbjct: 70  AIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSE 129

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSP--- 471
             +  +  T++ LI G  K  ++  A    L + +K DG             GYC     
Sbjct: 130 KGVMRNKVTLTLLIKGYCKQCKVEEAEK-VLREMEKEDGVVVDEYAYGALIDGYCKVGKM 188

Query: 472 -----------------NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                            N  +  ++I   C +GQ+ +  +L   MR  +L+PD+ +Y T+
Sbjct: 189 GDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTL 248

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + G  R         +   M++ GI P  V    +++G    GD K A R    + +  +
Sbjct: 249 VDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGV 308

Query: 575 GSSE 578
             +E
Sbjct: 309 TPNE 312


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 254/549 (46%), Gaps = 45/549 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           ++T+I +       +EAL + +++        P + + N +++G  K+G+       + E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+V DV TY  ++D  C    + KA  +  +M+DKG+EP  V Y  +IHG      
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             E+  MFR M   G++P+  T+++ M   CK      A E +  M      P++V++ +
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G    G      N F  MA  G+  N    N LI  H K G + EAM + +EM+   
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+V TY+ LI   C +G+L  A     +M   GI  N   Y+SLI G+C  GD+ KA 
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK 497

Query: 350 SVCSQMTEKGV------------------------------------EPNVVTFSSLIDG 373
              S+M  KG+                                     P +VTF+SLIDG
Sbjct: 498 EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDG 557

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ++ A G+   MV   + PDVV    L+ G  K G + + L L++EML  K+ P+
Sbjct: 558 YCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T + ++ GL + GR S A   F E  D       + +   Y  +++ LC +    +A 
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG----TAVDIDTYKILLKGLCRNDLTDEAI 673

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF  + + + + D     TM+  L + +R  +   L A +   G+VP+     VM+R  
Sbjct: 674 TLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNL 733

Query: 554 QENGDLKSA 562
            + G ++ A
Sbjct: 734 LKEGSVEEA 742



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 259/513 (50%), Gaps = 8/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++++ A  +   +++A +V R++    V P     NA+++G    G +    + + +M
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM 328

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL+ D VT+   +   C  G    A  +F  M  KG  P +V Y+IL+HG   E + 
Sbjct: 329 TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRF 388

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +  ++F SM + G+V N +  N L+  + K   ++ A+  + EM    ++PNVVT+  L
Sbjct: 389 ADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTL 448

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFE 289
           +   C++G L  A   F  M   G+ PN  VY+ LI G C  G+L +A    SEM  K  
Sbjct: 449 ISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++  ++ +I  LC  G++  A+ +   +   G    +VT+NSLIDGYC  G MEKA 
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V   M   G+EP+VVT ++L+ G CK+G ID  + L+ EM+ K + P  V +  ++DGL
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G      +++ EM+++     + T   L+ GL +N     A+  F  K    D   C
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF-HKLGAMD---C 684

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             +  +   +I AL    +  +A+ LF+ + +  L P+  TY  M+R LL+   + +   
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADT 744

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + + M K G  P + +   ++R   + GD+  A
Sbjct: 745 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 223/479 (46%), Gaps = 41/479 (8%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMF 177
           V TYG+L+DCCC              ++  G++   +  T  +  LC+  +  EA + + 
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVTFGVLMDGLC 235
             M E   VP+  +YN ++   C  +    AL+    M        P+VV+F  ++ G  
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K GE+  A N F  M + GV P++  YN ++D  CKA  + +A  +  +M    + PD  
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN +I G    G  + +  + +KM  +G++ + VT++S +   CK G  + A  +   M
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363

Query: 356 TEKGVEPNVVTFSSLIDG-----------------------------------QCKAGNI 380
           T KG  P++V++S L+ G                                     K G +
Sbjct: 364 TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMM 423

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D AM ++TEM  + + P+VV ++ LI    + G + + +  + +M+   I P+     SL
Sbjct: 424 DEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG   +G +  A  F  E   K   G   PN V +++II +LC +G+++ A  +F+ + 
Sbjct: 484 IHGFCMHGDLVKAKEFISEMMSK---GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI 540

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               RP   T+ +++ G     +M     +L  M+ +GI PD V N  +V GY ++G +
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 192/391 (49%), Gaps = 11/391 (2%)

Query: 185 VVP-NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           V P  + TY  LMD  C+    +    F   +L   L+   +     +  LC       A
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 244 GNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK--FEISPDVFTYNIL 300
            +  +H M++    P+   YN +I   C      EA+ +   M K     SPDV ++N +
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G    G++  A  L  +M ++G++ +V TYNS++D  CK   M+KA  V  QM +KGV
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           EP+ VT++++I G   +G+   +  ++ +M  K L+PD V F++ +  L K G  K+   
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           +++ M      P + + S L+HG    GR ++  N F    DK   G  S  H +   +I
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK---GIVSNCHCI-NILI 414

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A    G + +A  +F++M+   +RP+  TY+T++    R  R+ D M   + MI +GI 
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 541 PDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           P+  +   ++ G+  +GDL  A    EF+ E
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKA---KEFISE 502



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 190/378 (50%), Gaps = 2/378 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   K+G  D     + EM   G+  +VVTY  LI   C  G +  A+  F +MI 
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYNALMDGYCKVADVN 206
            GIEP   +Y  LIHG C    +V+A+     M   G+  PN+  +++++   C    V 
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A + ++ ++H   +P +VTF  L+DG C VG++  A      M   G+ P++   N L+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+CK+G + + + L  EM   ++ P   TYNI++ GL   G+   A+ +  +M   G  
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            ++ TY  L+ G C+    ++A+++  ++     + ++   +++I+   K    + A  L
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           +  +    LVP+V  +  +I  L K+G+++E   ++  M ++   PS   ++ +I  L +
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 770

Query: 447 NGRISNALNFFLEKTDKT 464
            G I  A  +++ K D T
Sbjct: 771 KGDIVKA-GYYMSKVDGT 787



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 185/376 (49%), Gaps = 6/376 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +STLI AF  MG + +A+  + +   I + P     ++L++G    G      EF 
Sbjct: 441 NVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFI 500

Query: 108 EEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EM+  GL   ++V +  +I   C +G VM A ++F+ +I  G  PT+V +  LI G C 
Sbjct: 501 SEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCL 560

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             KM +A  +  +M   G+ P++ T N L+ GYCK   ++  L  + EMLH  ++P  VT
Sbjct: 561 VGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++DGL + G   AA   F  M   G   +I  Y  L+ G C+     EA++L  ++ 
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 680

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             +   D+   N +I  L  V + E A  L   +   G++ NV TY  +I    KEG +E
Sbjct: 681 AMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVE 740

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A ++ S M + G  P+    + +I    + G+I  A G Y   V  +++      T+L+
Sbjct: 741 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA-GYYMSKVDGTIISLEASTTSLL 799

Query: 407 DGL-SKDGNMKETLRL 421
             L S  G  +E ++ 
Sbjct: 800 MSLFSSKGKHREQIKF 815


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 238/463 (51%), Gaps = 4/463 (0%)

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +++  G   D VT+  LI+  C +G V +AL L D M++ G +PT++    L++GLC   
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ +A  +   M E G  PN  TY  ++   CK      A+E   +M    ++ + V + 
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++DGLCK G L  A N F  M   G   +I +Y  LI G C AG   +   L  +M K 
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +I+PDV  ++ LI      G+L  AE L ++M + GI  + VTY SLIDG+CKE  ++KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M  KG  PN+ TF+ LI+G CKA  ID  + L+ +M ++ +V D V +  LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G ++    L++EM+  ++ P + +   L+ GL  NG    AL  F EK +K+    
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSK--- 487

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              +  +Y  II  +C   ++  A  LF  +    ++PD  TY  M+ GL +   + +  
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L   M + G  P+     +++R +   GD   + +  E +K 
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 242/481 (50%), Gaps = 4/481 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   + L + + +  ++D V +  ++M L G+  ++ T  ++I+CCC    +  A + 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             ++I  G EP  V ++ LI+GLC E ++ EA  +   M E G  P L T NAL++G C 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+ A+     M+    QPN VT+G ++  +CK G+   A      M +  +  +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ +IDG CK G+L  A +L +EME      D+  Y  LI+G C  G+ +    LL+ M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K  I  +VV +++LID + KEG + +A  +  +M ++G+ P+ VT++SLIDG CK   +D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +   MV K   P++  F  LI+G  K   + + L L+++M    +     T ++LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G++  A   F E   +       P+ V Y  ++  LC +G+  KA ++F  +  
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRR----VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             +  D   Y  ++ G+  A ++ D   L   +   G+ PD     +M+ G  + G L  
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 562 A 562
           A
Sbjct: 546 A 546



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 245/506 (48%), Gaps = 12/506 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L +AFS MG I        K+   P     + L+NGL  +G+     E  + MV  G   
Sbjct: 123 LSLAFSAMGKI-------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
            ++T   L++  C  G V  A+ L D M++ G +P  V Y  ++  +C   +   A  + 
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R M E  +  +   Y+ ++DG CK   ++ A   ++EM     + +++ +  L+ G C  
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G           M K  + P++  ++ LID   K G L EA  L  EM +  ISPD  TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI G C   QL+ A  +L  M  +G   N+ T+N LI+GYCK   ++  L +  +M+ 
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +GV  + VT+++LI G C+ G ++ A  L+ EMV + + PD+V +  L+DGL  +G  ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L +++++ ++K+   +   + +IHG+    ++ +A + F     K       P+   Y 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG----VKPDVKTYN 531

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I  LC  G + +A  LF  M  D   P+ CTY  ++R  L          L+ ++ + 
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAF 563
           G   DA   + MV     +G LK +F
Sbjct: 592 GFSVDASTVK-MVVDMLSDGRLKKSF 616



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 10/440 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF EM      P ++ ++ L   +    +      + + M   G+  NLYT + +++
Sbjct: 56  AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C+   ++ A     +++    +P+ VTF  L++GLC  G +  A      M + G  P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +   N L++G C  G + +A+ L   M +    P+  TY  ++K +C  GQ   A  LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +KM +  I  + V Y+ +IDG CK+G ++ A ++ ++M  KG + +++ +++LI G C A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G  D    L  +M+ + + PDVV F+ALID   K+G ++E   L+KEM++  I+P   T 
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 438 SSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +SLI G  K  ++  A   L+  + K        C PN   +  +I   C    I    +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKG-------CGPNIRTFNILINGYCKANLIDDGLE 408

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M    +  D  TY T+++G     ++     L  +M+   + PD V  ++++ G  
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG+ + A    E +++S++
Sbjct: 469 DNGEPEKALEIFEKIEKSKM 488



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 190/391 (48%), Gaps = 4/391 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +F+ M      P L  ++ L     +    +  L+   +M    +  N+ T  +++
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C+  +L  A +    + K G  P+   ++ LI+G C  G + EA+ L   M +    
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P + T N L+ GLC  G++  A  L+ +M + G   N VTY  ++   CK G    A+ +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M E+ ++ + V +S +IDG CK G++D A  L+ EM IK    D++++T LI G   
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G   +  +L ++M++ KITP V   S+LI    K G++  A     E   +      SP
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG----ISP 350

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y ++I   C + Q+ KA+ +   M S    P+  T+  ++ G  +A  + D + L 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             M   G+V D V    +++G+ E G L+ A
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L Q+M +      ++ ++ L     +    +  L +C QM  KG+  N+ T S +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+  C+   +  A     +++     PD V F+ LI+GL  +G + E L L   M+E   
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 431 TPSVFTVSSLIHGLFKNGRISNAL-------------------------------NFFLE 459
            P++ T+++L++GL  NG++S+A+                                  +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              K +      + V Y+ II  LC DG +  A  LF++M     + D   YTT++RG  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            A R  D   LL DMIK  I PD V    ++  + + G L+ A
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 3/184 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  F E+G +E A  +++++    V P I +   LL+GL   G+ +   E +E++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D+  Y ++I   C    V  A +LF  +  KG++P V  Y I+I GLC +  +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ +FR M E G  PN  TYN L+  +    D  ++ +   E+       +  T  ++
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603

Query: 231 MDGL 234
           +D L
Sbjct: 604 VDML 607


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 174/596 (29%), Positives = 276/596 (46%), Gaps = 65/596 (10%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVL 81
           L KSR+ +    ++ + ++  E+ K N  V++ LI  F   G+ +EA  + +++    V 
Sbjct: 302 LCKSRRSNE-AKALLDEMSCAEL-KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 359

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     + L+ GL K G+ D      ++MV      D +TY ++I+          A  L
Sbjct: 360 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 419

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM + GI P V  Y+I+IHGLC   +  +A  +   M   G+ PN + Y  L+ GYC+
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V+ A E + +M   N+ P++  +  L+ GL KVG +  +  +F  M + G+ PN F 
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISP----------------------------- 292
           Y+ LI G+ K G+L  A  L   M    + P                             
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 293 ------DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D   Y ILI  L   G +E A  +L  + K G + +V  Y+SLI G CK  D E
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA  +  +M++KGV+PN+V +++LIDG CK+G+I  A  ++  ++ K LVP+ V +T+LI
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K G++     LY EML   ITP  F  S L  G    G +  A+    E   +   
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 779

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              S N+     ++   C  G++ +  KL   +    L P+  T   ++ GL  A ++ +
Sbjct: 780 SISSFNN-----LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 834

Query: 527 VMM-------------------LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           V                     L  DMI  G +P  V++  M+R + + G+L  A 
Sbjct: 835 VHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKAL 889



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 249/497 (50%), Gaps = 4/497 (0%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           GH  +   + R +E   A     + L    K  +FD+  +   EM   G   + VTY VL
Sbjct: 204 GHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 263

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C  G V +A     +M D G+ P    Y  LI+GLC   +  EA+++   M    +
Sbjct: 264 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 323

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            PN+  Y  L+DG+ +  + + A +   EM+   +QPN +T+  L+ GLCK+G++  A  
Sbjct: 324 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 383

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M +    P+   YN +I+GH +  +  +A  L SEME   ISP+V+TY+I+I GLC
Sbjct: 384 LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 443

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+ E A  LL++M  +G+  N   Y  LI GYC+EG++  A  +  +MT+  V P++ 
Sbjct: 444 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 503

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            ++SLI G  K G ++ +   + +M  + L+P+   ++ LI G  K+G+++   +L + M
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           L+  + P+      L+   FK+  I    + F    D+   G    N + Y  +I  L  
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ---GVMLDNRI-YGILIHNLSS 619

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A ++ S +  +   PD   Y++++ GL +         +L +M K G+ P+ V 
Sbjct: 620 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679

Query: 546 NQVMVRGYQENGDLKSA 562
              ++ G  ++GD+  A
Sbjct: 680 YNALIDGLCKSGDISYA 696



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 240/486 (49%), Gaps = 5/486 (1%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           E+ P +     L++G +++G  D  ++  +EMV  G+  + +TY  L+   C  G + +A
Sbjct: 322 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 381

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             L  +M+     P  + Y ++I G    +   +A  +   M   G+ PN+YTY+ ++ G
Sbjct: 382 SLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG 441

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C+  +  +A +   EM    L+PN   +  L+ G C+ G +  A   F  M K  V P+
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           ++ YN LI G  K G + E+    ++M++  + P+ FTY+ LI G    G LE AE L+Q
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   G+  N V Y  L++ Y K  D+EK  S    M ++GV  +   +  LI     +G
Sbjct: 562 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 621

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           N++AA  + + +     VPDV V+++LI GL K  + ++   +  EM +  + P++   +
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI GL K+G IS A N F     K       PN V Y ++I   C  G I  A  L+++
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKG----LVPNCVTYTSLIDGSCKVGDISNAFYLYNE 737

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M +  + PD   Y+ +  G   A  +   M L+ +M   G    +  N  +V G+ + G 
Sbjct: 738 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGK 796

Query: 559 LKSAFR 564
           ++   +
Sbjct: 797 MQETLK 802



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 234/511 (45%), Gaps = 84/511 (16%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   + +++GL + G+ +   +  EEM   GL  +   Y  LI   C +G+V  A 
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +FD+M    + P +  Y  LI GL    ++ E+   F  M+E G++PN +TY+ L+ GY
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D+  A +    ML   L+PN V +  L++   K  ++    + F  M   GV  + 
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  LI     +GN+  A  + S +EK    PDV  Y+ LI GLC     E A G+L +
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K+G+  N+V YN+LIDG CK GD+  A +V + +  KG+ PN VT++SLIDG CK G+
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727

Query: 380 IDAAMGLYTEMVIKSLVPDVVV----------------------------------FTAL 405
           I  A  LY EM+   + PD  V                                  F  L
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 787

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTD 462
           +DG  K G M+ETL+L   ++   + P+  T+ ++I GL + G++S     F+E   KT 
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 847

Query: 463 KTDGGYCS------------PNHVL----------------------------------Y 476
           ++   + S            P  V+                                  Y
Sbjct: 848 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 907

Query: 477 AAIIQALCYDGQILKASKLFSDM-RSDNLRP 506
            AI+  LC  G++ +A  L  +M +  NL+P
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 938



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 206/427 (48%), Gaps = 57/427 (13%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++LI   S++G +EE+   + +++   +LP     + L++G +K G  +S  +  + M+
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  + V Y  L++      D+ K  + F  M+D+G+     IY ILIH L +   M 
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +   + + G VP+++ Y++L+ G CK AD  +A     EM    + PN+V +  L+
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK G++  A N F  +   G+ PN   Y  LIDG CK G++  A  L +EM    I+
Sbjct: 685 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 744

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F Y++L  G    G LE A  L+++M+  G  A++ ++N+L+DG+CK G M++ L +
Sbjct: 745 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKL 803

Query: 352 CSQMTEKGVEPNVVTFSSLIDG-------------------------------------- 373
              +  +G+ PN +T  ++I G                                      
Sbjct: 804 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 863

Query: 374 ---------------QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
                           CK GN+D A+ L   +V KS       + A++D L + G + E 
Sbjct: 864 QGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 923

Query: 419 LRLYKEM 425
           L L KEM
Sbjct: 924 LNLLKEM 930



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 146/332 (43%), Gaps = 55/332 (16%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++ L   G  ++ +     +   G V DV  Y  LI   C   D  KA  + DEM  KG
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++P +V Y  LI GLC    +  A ++F S+   G+VPN  TY +L+DG CKV D++ A 
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             Y+EML   + P+   + VL  G    G+L  A  F +         +I  +N L+DG 
Sbjct: 733 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA-MFLIEEMFLRGHASISSFNNLVDGF 791

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL---------------EGA- 313
           CK G + E + L   +    + P+  T   +I GL   G+L               E A 
Sbjct: 792 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 851

Query: 314 ------------------------------EGLLQK--MYKEGILANVV-----TYNSLI 336
                                         EG L K  M ++ I+A        +Y +++
Sbjct: 852 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 911

Query: 337 DGYCKEGDMEKALSVCSQMTEKG-VEPNVVTF 367
           D  C++G + +AL++  +M ++G ++P +V  
Sbjct: 912 DNLCRKGKLSEALNLLKEMDKRGNLQPTLVAL 943



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%)

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C  N V Y  +I  LC  G + +A     DM    L PD  TY  ++ GL +++R  +  
Sbjct: 253 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 312

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            LL +M    + P+ V+   ++ G+   G+   AF+
Sbjct: 313 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 244/479 (50%), Gaps = 21/479 (4%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  + P+ +ACNA+L+ L      D   E ++E+       +V +Y +L+   C  G V
Sbjct: 224 RQYGISPSPEACNAVLSRL----PLDEAIELFQELPH----KNVCSYNILLKALCDAGRV 275

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  LFDEM      P VV Y ILIHG C   ++  A  +   M   GV PN   Y ++
Sbjct: 276 KDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSV 332

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C    ++ AL    +M+   +  +   +  ++ G C  G+L +A  +F  M + G+
Sbjct: 333 VALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGL 392

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +   Y  +I+G C+A  L EA  L  EM    +  D  TY +LI G C  G++  A  
Sbjct: 393 ATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQ 452

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M + G+  NVVTY +L DG CK+GD++ A  +  +M+ KG+E N  T++SLI+G C
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 512

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KAG ++ AM    +M    L PDV  +T LID L K G++     L +EML+  I P++ 
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIV 572

Query: 436 TVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T + L++G   +GR+      L++ LEK          PN   Y ++++  C +  +   
Sbjct: 573 TYNVLMNGFCMSGRVEGGKKLLDWMLEKN-------IHPNAATYNSLMKQYCIENNMKST 625

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           ++++  MRS ++ P+  TY  +++G  +A+ M + +    +MI+ G    A     ++R
Sbjct: 626 TEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIR 684



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 238/466 (51%), Gaps = 4/466 (0%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           E+P  N   ++ L+ A  + G +++A  ++ ++   P +     L++G    G+ ++  +
Sbjct: 253 ELPHKNVCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVK 312

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV  G+  +   Y  ++   C +G +  AL + ++M+ + +     +YT ++ G C
Sbjct: 313 LLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFC 372

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N+  +V A   F  M+  G+  +  TY  +++G C+  ++  A +   EM    L  + V
Sbjct: 373 NKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEV 432

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ VL+DG CK G++  A      M + GV PN+  Y  L DG CK G++  A  L  EM
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               +  +  TYN LI GLC  G LE A   +  M    +  +V TY +LID  CK GD+
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDL 552

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A S+  +M +KG++P +VT++ L++G C +G ++    L   M+ K++ P+   + +L
Sbjct: 553 DRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +     + NMK T  +YK M    + P+  T + LI G  K   +  AL F  E   K  
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK-- 670

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            G+       Y+A+I+ L    + ++A +LF DMR + L  ++  Y
Sbjct: 671 -GF-RLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVY 714



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/423 (32%), Positives = 204/423 (48%), Gaps = 42/423 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N +V+++++    + G I +AL      V RK+ +  A+     +L+G   KG   S   
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY--TTVLSGFCNKGDLVSARR 382

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +++EM   GL  D VTY  +I+  C   ++ +A  L  EM  + ++   V YT+LI G C
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              KM EA  M  +M + GV PN+ TY AL DG CK  DV  A E  HEM +  L+ N  
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G L  A      M    + P+++ Y  LID  CK+G+L  A SL  EM
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL---------- 335
               I P + TYN+L+ G C  G++EG + LL  M ++ I  N  TYNSL          
Sbjct: 563 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNM 622

Query: 336 -------------------------IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                                    I G+CK  +M++AL    +M +KG      ++S+L
Sbjct: 623 KSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSAL 682

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I    K      A  L+ +M  + L  +  V+   ID    + N++ TL L  E++EA I
Sbjct: 683 IRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742

Query: 431 TPS 433
             S
Sbjct: 743 VKS 745



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 202/399 (50%), Gaps = 15/399 (3%)

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           + R +R+ G+ P+    NA++        ++ A+E + E+ H N    V ++ +L+  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKN----VCSYNILLKALC 270

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G ++ A   F  MA     P++  Y  LI GHC  G L  A+ L  EM    + P+  
Sbjct: 271 DAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            Y  ++  LC  G +  A  +++ M +  ++ +   Y +++ G+C +GD+  A     +M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             KG+  + VT++++I+G C+A  ++ A  L  EM  + L  D V +T LIDG  K G M
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E  +++  M++  +TP+V T ++L  GL K G +  A     E ++K        N   
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG----LELNACT 503

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y ++I  LC  G + +A +  +DM +  L+PD  TYTT++  L ++  +     LL +M+
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEML 563

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             GI P  V   V++ G+  +G ++   +  +++ E  I
Sbjct: 564 DKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N+ +YN L+   C    V  A + + EM      P+VVT+G+L+ G C +GEL  A    
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLL 314

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M   GV PN  VY  ++   C  G + +A+ +  +M + ++  D   Y  ++ G C  
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G L  A     +M ++G+  + VTY ++I+G C+  ++E+A  +  +M  + ++ + VT+
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + LIDG CK G +  A  ++  MV + + P+VV +TAL DGL K G+++    L  EM  
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             +  +  T +SLI+GL K G +  A+    +     D     P+   Y  +I ALC  G
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMAD----MDTACLKPDVYTYTTLIDALCKSG 550

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + +A  L  +M    ++P   TY  ++ G   + R+     LL  M++  I P+A    
Sbjct: 551 DLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYN 610

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            +++ Y    ++KS     + ++   +G +E
Sbjct: 611 SLMKQYCIENNMKSTTEIYKGMRSRDVGPNE 641


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 250/507 (49%), Gaps = 36/507 (7%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++TL+ A++ +G I++A  V   +      P +   N L  GL + GK D  ++  +E
Sbjct: 280 ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339

Query: 110 MVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           M   G+V+ DVVTY  L+D C        ALNL +EM +KG++ ++V + I++ GLC E 
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EA      M E G+ P++ TYN L+D  CK  +V +A     EM+   L+ +  T  
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+  LCK      A        + G  P+   Y  ++  + K      A+ L  EM K 
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +++P + TYN LIKGL  +G+L  A   L ++ + G++ +  TYN +I  YCKEGD+EKA
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKA 579

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
               ++M E   +P+VVT ++L++G C  G ++ AM L+   V K    DV+ +  LI  
Sbjct: 580 FQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQA 639

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDG 466
           L KD ++   LR + +M    + P VFT + L+  L + GR   A      L ++ K  G
Sbjct: 640 LCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYG 699

Query: 467 GYCSP------------------------------NHVLYAAIIQALCYDGQILKASKLF 496
            +  P                              +   Y   I+ LC  GQ+ +A  + 
Sbjct: 700 RFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVL 759

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            +M    +  DN TY T++ GL++ ++
Sbjct: 760 DEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 250/488 (51%), Gaps = 7/488 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKF--DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           V P++QA NA+L+ L +       +  + +  ++   L  +  T+ +L+   C +G +  
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLAD 227

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+   +M   G+ P  V Y  L++  C +  + EA ++   M++ G+VP   TYN L+ 
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVS 287

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-VF 256
            Y ++  + +A +    M     +P++ T+ VL  GLC+ G++  A      M + G V 
Sbjct: 288 AYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVS 347

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  YN L+D   K     +A++L  EM +  +   + T+NI++KGLC  GQLE A G 
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M +EG+  +V+TYN+LID  CK G++ KA  +  +M   G++ +  T ++L+   CK
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 467

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
               + A  L      +  VPD V +  ++    K+   +  L L+ EM++ K+TPS+ T
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIST 527

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI GL   G+++ A++   E  +        P+   Y  II A C +G + KA +  
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMG----LVPDDTTYNIIIHAYCKEGDLEKAFQFH 583

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           + M  ++ +PD  T  T++ GL    R+   M L    ++ G   D +    +++   ++
Sbjct: 584 NKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKD 643

Query: 557 GDLKSAFR 564
            D+ +A R
Sbjct: 644 NDVDTALR 651



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 180/371 (48%), Gaps = 8/371 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGEL--RAA 243
           P     +A +  Y ++   + A +  H       ++P++     ++  L +      +A+
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            + F  +    + PN + +N L+  HC  G L +A+S  S+M+ F +SPD  TYN L+  
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G L  A  LL +M KEGI+    TYN+L+  Y + G +++A  V   MT  G EP+
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPD 313

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLY 422
           + T++ L  G C+AG +D A  L  EM    +V PDVV +  L+D   K     + L L 
Sbjct: 314 LWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLL 373

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM E  +  S+ T + ++ GL + G++  AL      T++      +P+ + Y  +I A
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG----LTPDVITYNTLIDA 429

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G + KA  L  +M    L+ D  T  T+L  L + KR  +   LL    + G VPD
Sbjct: 430 SCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPD 489

Query: 543 AVINQVMVRGY 553
            V    ++  Y
Sbjct: 490 EVSYGTVMAAY 500



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 20/220 (9%)

Query: 381 DAAMGLYTEMVIKSLV--------------PDVVVFTALIDGLSKDGNM--KETLRLYKE 424
           DAA+  Y  + +  L               P +    A++  L++  +   + +L  +  
Sbjct: 140 DAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHS 199

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ++  ++ P+ +T + L+H     G +++AL+       K  G   SP+ V Y  ++ A C
Sbjct: 200 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTL----SKMQGFGLSPDAVTYNTLLNAHC 255

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G + +A  L + M+ + + P   TY T++    R   +     ++  M   G  PD  
Sbjct: 256 RKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
              V+  G  + G +  AF+  + +++  I S +   + T
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNT 355


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 252/508 (49%), Gaps = 52/508 (10%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  LN L++ G+     + + E      V +  TYG LI   C  G + +A  L DEM D
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +GI P V ++  +I GLC   +  +A   F+++      P++ T+N L+D   K   V  
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 208 ALEFYHEMLHHNLQ--PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           A + +  M H + Q  PNVVT+  +++GLCK G+L  A      M + G  PN+  Y+ L
Sbjct: 119 AFQIFESM-HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++G CKAG   +  +L  EM +    PDV  YN L+ GLC   +L+ A  L+Q M + G 
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              VVTYNSL++ +C+   +++A  +   M+E+G  P+V+ ++++I G C+   +D A  
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN----------------MKET----------- 418
           L  +MV    VPDV+ ++ +IDGL KD                  MK+T           
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 419 --------------LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
                         L L + M+++++ P + + S +I  L K+  +  A   F   +++ 
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C PN V YAA+I  L   G++ KA ++F ++  ++ RP   TY ++L GL    R+
Sbjct: 418 ----CKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + + ++  MI     PD      ++RG
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRG 500



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 233/480 (48%), Gaps = 15/480 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + +LI    + G +++A   L   R   + P +   N ++ GL K G+F     ++
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCN 166
           + +       D++T+ +L+D     G V +A  +F+ M       P VV YT +I+GLC 
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + K+  A  +   M E G  PN+ TY+ L++G CK    ++      EM     QP+V+ 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L++GLCK   L  A      M + G +P +  YN L++  C++  +  A  L   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG--- 343
           +    PDV  YN +I GLC   +L+ A+ LL++M     + +V+TY+++IDG CK+    
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 344 ---DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
               +E A  +   M + G  PN  T++ +I+G C+A     A+ L   M+   +VPD+ 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            F+ +I  L K  ++    +++  M E +  P+    ++LI GL K G +  A+  F   
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +        P    Y +++  LC  G+I +A ++   M      PD  +Y  ++RGL R
Sbjct: 449 VESF-----RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 219/442 (49%), Gaps = 12/442 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ LF E   +   P    Y  LIHGLC   K+ +A  +   MR+ G+ P +  +N ++
Sbjct: 16  QAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVI 72

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGV 255
            G CK      AL ++  +      P+++TF +L+D L K G +  A   F  M      
Sbjct: 73  RGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQC 132

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y  +I+G CK G L  A+ L   M +    P+V TY++L++GLC  G+ +    
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LLQ+M + G   +V+ YN+L++G CK   +++AL +   M   G  P VVT++SL++  C
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           ++  +D A  L   M  +   PDV+ +  +I GL +D  + +   L K+M+ A+  P V 
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312

Query: 436 TVSSLIHGLFKNGRIS-----NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           T S++I GL K+ R+       A    LE   +T    C PN   YA +I+ LC   +  
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG---CPPNAGTYAVVIEGLCRARKSQ 369

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  L   M    + PD  +++ ++  L ++  +     +   M +    P+ V    ++
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
            G  + G++  A R  E + ES
Sbjct: 430 DGLSKGGEVDKAVRVFELMVES 451



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 214/421 (50%), Gaps = 13/421 (3%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDS 102
           K  P +  F+ L+ A  + G +EEA  ++  +    + LP +     ++NGL K GK D 
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             E  + M   G   +V+TY VL++  C  G   K   L  EM  +G +P V++Y  L++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC   ++ EA  + + M   G  P + TYN+LM+ +C+   V+RA      M      P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN------LF 276
           +V+ +  ++ GLC+   L  A      M      P++  Y+ +IDG CK         L 
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLE 334

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  +   M++    P+  TY ++I+GLC   + + A  LL++M    ++ ++ +++ +I
Sbjct: 335 AACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              CK  D++ A  +   M+E+  +PN V +++LIDG  K G +D A+ ++ E++++S  
Sbjct: 395 GSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFR 453

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P V  + +++DGL   G ++E +R+ + M+  +  P   +  +LI GL +   +  A   
Sbjct: 454 PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513

Query: 457 F 457
           F
Sbjct: 514 F 514



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 47/386 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+    + G  ++   + +++      P +   N LLNGL K  + D   E  
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+  G    VVTY  L++  C    V +A  L   M ++G  P V+ Y  +I GLC +
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN--------------------- 206
            ++ +A+++ + M     VP++ TY+ ++DG CK   V+                     
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349

Query: 207 --------------------RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
                               +AL     M+   + P++ +F +++  LCK  +L AA   
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLC 305
           F  M++    PN   Y  LIDG  K G + +A+ +   M E F   P V TYN ++ GLC
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYNSVLDGLC 467

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
           GVG++E A  +++ M  +    +  +Y +LI G C+   +E+A  +   +  KG    V 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMV 391
            ++ L++  CK   +  A G+  +++
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 18/322 (5%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSV 103
           P+V  +++L+  F     ++ A   +R I+V+      P +   N ++ GL +  + D  
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRA---FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV------MKALNLFDEMIDKGIEPTVVIY 157
               ++MV    V DV+TY  +ID  C    V        A  + + M   G  P    Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            ++I GLC   K  +A ++ R M +  VVP+L +++ ++   CK  D++ A + +  M  
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
              +PN V +  L+DGL K GE+  A   F  M +    P +  YN ++DG C  G + E
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEE 474

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ +   M   E  PD  +Y  LI+GLC V  +E A  L Q +  +G    V  YN L++
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534

Query: 338 GYCKEGDMEKALSVCSQMTEKG 359
             CK+  +  A  V +++ E G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 235/429 (54%), Gaps = 4/429 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + LL+ + K  K+D V   +E+M + G+  ++ T  +L++C C    +  AL+
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +M+  G EP +V +  L++G C  +++ +A  MF  M E G  PN+  YN ++DG C
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V+ AL+  + M    ++P+ VT+  L+ GLC  G    A      M K  ++P++F
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LID   K G + EA  L  EM +  + PD+ TY++LI GLC   +L+ AE +   M
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VVTY+ LI+GYCK   +E  + +  +M+++GV  N VT++ LI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  ++  MV   + P+++ +  L+ GL  +G +++ L +  +M ++ +   + T + +
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNII 437

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G+ K G +++A + +     K      +P+   Y A++  L   G   +A  LF  M+
Sbjct: 438 IRGMCKAGEVADAWDLYCSLNLKG----LTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493

Query: 501 SDNLRPDNC 509
            D + P+ C
Sbjct: 494 EDGILPNEC 502



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 220/422 (52%), Gaps = 8/422 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +L+LF  M+     P++  ++ L+  +    K      ++  M+  G+  NL T N L++
Sbjct: 65  SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL F  +M+    +P++VTFG L++G C+   +  A   F  M + G  P
Sbjct: 125 CFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEP 184

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +IDG CK+  +  A+ L + ME   I PD  TYN LI GLC  G+ + A  ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMV 244

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K  I  +V T+N+LID   KEG + +A  +  +M  + ++P++VT+S LI G C  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  ++  MV K   PDVV ++ LI+G  K   ++  ++L+ EM +  +  +  T 
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
           + LI G  + G+++ A   F          +C   PN + Y  ++  LC +G+I KA  +
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMV------FCGVPPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            +DM+   +  D  TY  ++RG+ +A  + D   L   +   G+ PD      M+ G  +
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK 478

Query: 556 NG 557
            G
Sbjct: 479 KG 480



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 227/453 (50%), Gaps = 5/453 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L NG I+  K D   + +  MV C  +  +  +  L+            + L+++M   G
Sbjct: 53  LRNG-IRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   +    IL++  C  +++  A S    M + G  P++ T+ +L++G+C+   +  AL
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDAL 171

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             +  M+    +PNVV +  ++DGLCK  ++  A +    M   G+ P+   YN LI G 
Sbjct: 172 YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C +G   +A  + S M K EI PDVFT+N LI      G++  AE L ++M +  +  ++
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY+ LI G C    +++A  +   M  KG  P+VVT+S LI+G CK+  ++  M L+ E
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + +V + V +T LI G  + G +     ++K M+   + P++ T + L+HGL  NG+
Sbjct: 352 MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           I  AL       D    G    + V Y  II+ +C  G++  A  L+  +    L PD  
Sbjct: 412 IEKALVIL---ADMQKSGM-DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIW 467

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           TYT M+ GL +     +   L   M + GI+P+
Sbjct: 468 TYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 220/434 (50%), Gaps = 10/434 (2%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ ++  +F  M +C  +P++  ++ L+    K+   +  +  + +M    +  N+ T  
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +L++  C+  +L  A +F   M K G  P+I  +  L++G C+   +++A+ +   M + 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+V  YN +I GLC   Q++ A  LL +M  +GI  + VTYNSLI G C  G  + A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + S MT++ + P+V TF++LID   K G I  A  LY EM+ +SL PD+V ++ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L     + E  +++  M+     P V T S LI+G  K+ ++ + +  F E + +     
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG---- 356

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              N V Y  +IQ  C  G++  A ++F  M    + P+  TY  +L GL    ++   +
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLKESRIGSSETEGHTTRS 586
           ++LADM K G+  D V   +++RG  + G++  A+   CS  LK    G +      T  
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLK----GLTPDIWTYTAM 472

Query: 587 FLGHLKPTVYKEQD 600
            LG  K  +  E D
Sbjct: 473 MLGLYKKGLRGEAD 486



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 177/316 (56%), Gaps = 3/316 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++T+I    +   ++ AL +  ++EV    P     N+L++GL   G++D      
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMV 244

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M    +  DV T+  LID C  +G + +A  L++EMI + ++P +V Y++LI+GLC  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++ EAE MF  M   G  P++ TY+ L++GYCK   V   ++ + EM    +  N VT+
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+ G C+ G+L  A   F  M   GV PNI  YN L+ G C  G + +A+ + ++M+K
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ TYNI+I+G+C  G++  A  L   +  +G+  ++ TY +++ G  K+G   +
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE 484

Query: 348 ALSVCSQMTEKGVEPN 363
           A ++  +M E G+ PN
Sbjct: 485 ADALFRKMKEDGILPN 500



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 19/423 (4%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L   +++KG   T    +  I GLC   +     S +R M   G+             Y 
Sbjct: 13  LHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGI------------RYM 60

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K+ D   +L+ +  M+     P++  F  L+  + K+ +       +  M   G+  N+ 
Sbjct: 61  KLDD---SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             N L++  C+   L  A+S   +M K    PD+ T+  L+ G C   ++  A  +  +M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G   NVV YN++IDG CK   ++ AL + ++M   G+ P+ VT++SLI G C +G  
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  + + M  + + PDV  F ALID   K+G + E   LY+EM+   + P + T S L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+GL    R+  A   F     K     C P+ V Y+ +I   C   ++    KLF +M 
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              +  +  TYT +++G  RA ++     +   M+  G+ P+ +   V++ G  +NG ++
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413

Query: 561 SAF 563
            A 
Sbjct: 414 KAL 416


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 228/436 (52%), Gaps = 4/436 (0%)

Query: 81   LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            +P+I     +L  + K  KFD V   + +M   G+  D+ ++ +LI C C       AL 
Sbjct: 612  IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALA 671

Query: 141  LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            L  +M+  G +P++V    L++G C  N+  EA S+  SM E G+ PN+  YN +++G C
Sbjct: 672  LLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            K  D+N ALE ++ M    +  + VT+  L+ GLC  G    A      M K  + PN+ 
Sbjct: 732  KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             +  LID   K GNL EA +L  EM +  + P++ TYN LI G C  G+L  A+ +   M
Sbjct: 792  FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              +G   +VVTYN+LI G+CK   +E  + +  +MT +G+  +  T+++LI G C+AG +
Sbjct: 852  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            + A  ++  MV   + PD+V +  L+D L  +G +++ L + +++ + ++   + T + +
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            I G+ +N ++  A   F   T K        + + Y  +I  LC +G   +A KL + M+
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKG----VKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 501  SDNLRPDNCTYTTMLR 516
             D   P    Y   LR
Sbjct: 1028 EDGFMPSERIYDETLR 1043



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 232/442 (52%), Gaps = 8/442 (1%)

Query: 67  HIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
             E+AL ++ ++   + LP++     LL  +    ++++V  F ++M L G+  D+ ++ 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LI C C    +  AL++  +M+  G +P++V +  L+HG C  N++ +A S+  SM + 
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRA 242
           G  PN+  YN L+D  CK  DVN ALE  +EM     L  ++VT+  L+ GLC  GE R 
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M K  + P++F +  LID   K GNL EA  L  +M +  I P+  TYN LI 
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC  G+L  A+     M  +G   NVVTYN+LI+G+CK   +E  + +  +M  +G+  
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +  T+++LI G C+ G +  A  +++ MV   + PD++    L+ GL  +G +   +  +
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKF 404

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M   +    +   + +IHGL K  ++  A   F       +G    P+   Y  +I  
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRL--PVEG--VKPDARTYTIMILG 460

Query: 483 LCYDGQILKASKLFSDMRSDNL 504
           LC +G   +A +LF  M+ D +
Sbjct: 461 LCKNGPRREADELFRRMKEDGI 482



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 231/443 (52%), Gaps = 8/443 (1%)

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A  LF EM+     P++V +T ++  +   NK      +F  M   G+  +LY++  L+ 
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             +C+ +  + AL    +M+    QP++VT G L++G C+    + A +    MA+ G+ P
Sbjct: 659  CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            N+ +YN +I+G CK  +L  A+ +   MEK  I  D  TYN LI GLC  G+   A  LL
Sbjct: 719  NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            + M K  I  NV+ + +LID + KEG++ +A ++  +M  + V PN++T++SLI+G C  
Sbjct: 779  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838

Query: 378  GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            G +  A  ++  MV K   PDVV +  LI G  K   +++ ++L+ EM    +    FT 
Sbjct: 839  GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY 898

Query: 438  SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
            ++LIHG  + G+++ A   F    D      C   P+ V Y  ++  LC +G+I KA  +
Sbjct: 899  NTLIHGYCQAGKLNVAQKVFNRMVD------CGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 496  FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              D++ + +  D  TY  +++G+ R  ++ +   L   + + G+  DA+    M+ G   
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 556  NGDLKSAFRCSEFLKESRIGSSE 578
            NG  + A +    +KE     SE
Sbjct: 1013 NGLRREADKLCTRMKEDGFMPSE 1035



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 229/446 (51%), Gaps = 5/446 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+LF EM+     P+VV +T L+  + N  +        + M   G+  +LY++  L+ 
Sbjct: 49  ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+     P++VTFG L+ G C    +  A +    M K G  P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           N+ VYN LID  CK G++  A+ L +EMEK   ++ D+ TYN L+ GLC  G+   A  +
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M K  I  +V T+ +LID + K+G++++A  +  QM +  + PN VT++SLI+G C 
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCM 288

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +  A   +  M  K   P+VV +  LI+G  K   +++ ++L++ M    +    FT
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG  + G++  A + F            +P+ + +  ++  LC +G+I  A   F
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCG----VTPDIITHCILLHGLCVNGEIGSAMVKF 404

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           +DMRS         Y  M+ GL +A ++ +   L   +   G+ PDA    +M+ G  +N
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN 464

Query: 557 GDLKSAFRCSEFLKESRIGSSETEGH 582
           G  + A      +KE  I     +GH
Sbjct: 465 GPRREADELFRRMKEDGIICQAEDGH 490



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 197/380 (51%), Gaps = 4/380 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI  F     +  AL +  K+  L   P+I    +LL+G   + +    +     MV
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKM 170
             G   +VV Y  LIDC C  GDV  AL L +EM  KG +   +V Y  L+ GLC   + 
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  + R M +  + P+++T+ AL+D + K  +++ A E Y +ML  ++ PN VT+  L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLC  G L  A   F  MA  G FPN+  YN LI+G CK+  + + M L   M +  +
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D FTYN LI G C VG+L  A+ +   M   G+  +++T+  L+ G C  G++  A+ 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
             + M        +V ++ +I G CKA  ++ A  L+  + ++ + PD   +T +I GL 
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462

Query: 411 KDGNMKETLRLYKEMLEAKI 430
           K+G  +E   L++ M E  I
Sbjct: 463 KNGPRREADELFRRMKEDGI 482



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 192/382 (50%), Gaps = 3/382 (0%)

Query: 55   FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            F+ LI  F        AL +  K+  L   P+I    +LLNG  +  +F       + M 
Sbjct: 653  FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712

Query: 112  LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              GL  +VV Y  +I+  C   D+  AL +F  M  KGI    V Y  LI GLCN  +  
Sbjct: 713  ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            +A  + R M +  + PN+  + AL+D + K  ++  A   Y EM+  ++ PN++T+  L+
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            +G C  G L  A + F  M   G FP++  YN LI G CK+  + + M L  EM    + 
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
             D FTYN LI G C  G+L  A+ +  +M   G+  ++VTYN L+D  C  G +EKAL +
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 352  CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
               + +  ++ +++T++ +I G C+   +  A  L+  +  K +  D + +  +I GL +
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 412  DGNMKETLRLYKEMLEAKITPS 433
            +G  +E  +L   M E    PS
Sbjct: 1013 NGLRREADKLCTRMKEDGFMPS 1034



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 221/455 (48%), Gaps = 4/455 (0%)

Query: 99   KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
            KFD  +  + EM+    +  +V +  ++            + LF +M + GI   +  +T
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 159  ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            ILIH  C  ++   A ++   M + G  P++ T  +L++G+C+      A+     M   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 219  NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             L+PNVV +  +++GLCK  +L  A   F  M K G+  +   YN LI G C +G   +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
              L  +M K +I P+V  +  LI      G L  A+ L ++M +  +  N++TYNSLI+G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 339  YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            +C +G +  A  +   M  KG  P+VVT+++LI G CK+  ++  M L+ EM  + LV D
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 399  VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
               +  LI G  + G +    +++  M++  + P + T + L+  L  NG+I  AL   +
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL-VMV 953

Query: 459  EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            E   K        + + Y  IIQ +C + ++ +A  LF  +    ++ D   Y TM+ GL
Sbjct: 954  EDLQKNQ---MDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 519  LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             R     +   L   M + G +P   I    +R +
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 186/369 (50%), Gaps = 5/369 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+        AL+ + EM+     P+VV F  L+  +  +        F   M  FG
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +++ +  LI   C+   L  A+S+  +M K    P + T+  L+ G C   ++  A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDG 373
            L+  M K G   NVV YN+LID  CK GD+  AL + ++M +KG +  ++VT+++L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C +G    A  +  +M  + + PDV  FTALID   K GN+ E   LYK+ML++ I P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T +SLI+GL  +GR+ +A   F    D      C PN V Y  +I   C   ++    
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTF----DLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KLF  M  + L  D  TY T++ G  +  ++     + + M+  G+ PD + + +++ G 
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391

Query: 554 QENGDLKSA 562
             NG++ SA
Sbjct: 392 CVNGEIGSA 400



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 4/290 (1%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++TLI      G   +A  + R   K ++ P +    AL++  +K+G        Y+EM
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +   +  +++TY  LI+  C QG +  A ++FD M+ KG  P VV Y  LI G C   ++
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             +   +F  M   G+V + +TYN L+ GYC+   +N A + ++ M+   + P++VT+ +L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 231  MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            +D LC  G++  A      + K  +  +I  YN +I G C+   + EA  L   + +  +
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 291  SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN-SLIDGY 339
              D   Y  +I GLC  G    A+ L  +M ++G + +   Y+ +L D Y
Sbjct: 997  KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 40/261 (15%)

Query: 49   KFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
            K +P+V  F+ LI  F + G++ EA  +Y+++    V P I   N+L+NG   +G+    
Sbjct: 785  KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844

Query: 104  WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               ++ MV  G   DVVTY  LI   C    V   + LF EM  +G+      Y  LIHG
Sbjct: 845  KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904

Query: 164  LCNENKMVEAESMFRSMRECGVVPNLYTYNALM--------------------------- 196
             C   K+  A+ +F  M +CGV P++ TYN L+                           
Sbjct: 905  YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964

Query: 197  --------DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
                     G C+   V  A   +  +    ++ + + +  ++ GLC+ G  R A     
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024

Query: 249  HMAKFGVFPNIFVYNCLIDGH 269
             M + G  P+  +Y+  +  H
Sbjct: 1025 RMKEDGFMPSERIYDETLRDH 1045


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 219/411 (53%), Gaps = 11/411 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S   T I   SEM          R +E+ P   A  +++  L  +G+        E+MV+
Sbjct: 299 SELETAIKLLSEMA--------ARGLELNPV--AYTSVIALLCDEGQVSDAVRVVEDMVM 348

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+V D   +  ++   C +GD+  A N FDEM  +G+    V YT LI+GLC   ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           AE + + M + G+  +  TY  L+DGYCKV  +  A   +++M+   + PNVVT+  L D
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK G++ AA      M   G+  NIF YN LI+G CKAGNL +AM    +M++  + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV+TY  +I  LC   +L+ A  LLQ+M  +GI   +VTYN L++G+C  G +E    + 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M EK + PN  T++SL+   C   N+ +   +Y  M+ + +VP+   +  LI G  K 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            NMKE L  + EM+E     +  + ++LI  L K  + + A   F EK  K
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF-EKMRK 698



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 255/508 (50%), Gaps = 21/508 (4%)

Query: 72  LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
           L   R+  + P+ ++CNA+L  L      D   + ++E+       +  +Y +L+   C 
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCT 265

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G +  A  LFDEM      P VV Y I++HG C  +++  A  +   M   G+  N   
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y +++   C    V+ A+    +M+ H +  +   F  +M G C+ G+L AA N+F  M 
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K G+  +   Y  LI+G C+AG L EA  +  EME   +  D  TY +LI G C VG++ 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +  KM ++ +  NVVTY +L DG CK+GD+  A  +  +M  KG+E N+ T++SLI
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G CKAGN++ AM    +M    L PDV  +T +I  L +   +     L +EML+  I 
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562

Query: 432 PSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           P++ T + L++G   +GR+      L + LEK          PN   Y ++++  C +  
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN-------IHPNTTTYNSLMKQYCIEKN 615

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +   ++++  M S  + P+  TY  +++G  +A+ M + +   ++MI+ G    A     
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGS 576
           ++R   +      A R  E +++ R+ +
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTA 703



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 209/392 (53%), Gaps = 5/392 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           + NP  ++++I    + G + +A+ V   +    V+        +++G  +KG   +   
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +++EM   GL AD VTY  LI+  C  G++ +A  +  EM DKG++   V YT+LI G C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              KM EA  +   M +  V PN+ TY AL DG CK  DV  A E  HEM    L+ N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G L  A    + M + G+ P+++ Y  +I   C++  L  A SL  EM
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I P + TYN+L+ G C  G++EG + LL+ M ++ I  N  TYNSL+  YC E +M
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M  + V PN  T++ LI G CKA N+  A+  ++EM+ K        + AL
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKIT--PSVF 435
           I  L+K     E  RL+++M + ++T  P V+
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 239/466 (51%), Gaps = 10/466 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           E+P+ N   ++ L+ A    G I++A  ++ ++   P +     +++G     + ++  +
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIK 306

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM   GL  + V Y  +I   C +G V  A+ + ++M+  G+     ++T ++ G C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  +  A + F  M++ G+  +  TY AL++G C+  ++  A     EM    L  + V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 226 TFGVLMDGLCKVGELRAAGNFFVH--MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           T+ VL+DG CKVG++  A  F VH  M +  V PN+  Y  L DG CK G++  A  L  
Sbjct: 427 TYTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    +  ++FTYN LI GLC  G LE A   +  M + G+  +V TY ++I   C+  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++++A S+  +M +KG++P +VT++ L++G C +G ++    L   M+ K++ P+   + 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+     + NMK T  +YK ML  ++ P+  T + LI G  K   +  AL F  E  +K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL--RPD 507
                 S     Y A+I+ L    +  +A +LF  MR + L   PD
Sbjct: 665 GFRLTASS----YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 206/400 (51%), Gaps = 15/400 (3%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +R+ G+ P+  + NA++   C++  ++ A++ + E+     + N  ++ +L+  LC  G 
Sbjct: 217 LRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           ++ A   F  MA     P++  Y  ++ G+C    L  A+ L SEM    +  +   Y  
Sbjct: 269 IKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  GQ+  A  +++ M   G++ +   + +++ G+C++GD+  A +   +M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +  + VT+++LI+G C+AG +  A  +  EM  K L  D V +T LIDG  K G M E  
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            ++ +M++ ++TP+V T ++L  GL K G +  A     E   K        N   Y ++
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG----LELNIFTYNSL 501

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC  G + +A +   DM    L+PD  TYTT++  L ++K +     LL +M+  GI
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
            P  V   V++ G+  +G ++   R  E++ E  I  + T
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 248/496 (50%), Gaps = 9/496 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +  V + L+    + G ++ A+ +  ++   P + A   ++NGL ++ + D  +   E  
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D VTY V ID  C    V  A  L  +M +K   PT V YT L+ GL    ++
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA ++   M E G  P L TY  ++DG  K   V  A   + +ML +  +P+   +  L
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187

Query: 231 MDGLCKVGELRAAGNFFVHMAK----FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + GL K+G+L  A  +   M +     GV P++ ++N +I   C +GNL +A++   E++
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD 247

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +    FT+N L+  LC   + E A   ++KM +      + TY SL+DG+ K G ++
Sbjct: 248 D-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +AL    +  E+G  P+ VT++S+IDG CK G ++     + EM  +   PD V + ALI
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 366

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K   + +  R+Y++ML++    S  T + ++ GL K GR++ A   FL   ++   
Sbjct: 367 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG-- 424

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C    V Y+A++   C +G +  A +LF  M      P+  +Y  ++RGL RA ++  
Sbjct: 425 --CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 527 VMMLLADMIKMGIVPD 542
                  +++  + PD
Sbjct: 483 AYFYFEKLLQRRLCPD 498



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 259/498 (52%), Gaps = 18/498 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++ +I   S+ G +EEA  ++  +++L     P      AL++GL K GK D    +  
Sbjct: 148 TYTVVIDGLSKAGRVEEARRIF--VDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLN 205

Query: 109 EMV----LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +MV      G+  DVV + ++I   C  G++  AL  FDE+ D  ++ T   +  L+  L
Sbjct: 206 QMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAAL 264

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +  EA +  + M E    P L+TY +L+DG+ K+  ++ AL    E +     P+ 
Sbjct: 265 CKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDA 324

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  ++DGLCK+G +      F  M   G  P+   Y  LIDG  KA  + +A  +  +
Sbjct: 325 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 384

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +        TYNI++ GLC  G++  A      M + G +A VVTY++L+DG+C EG+
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 444

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  A+ +  +M ++G EPN+V+++ +I G C+AG +  A   + +++ + L PDV  F +
Sbjct: 445 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNS 504

Query: 405 LIDGLSKD-GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            + GL +    + + + L++ M+    +P++ + S L+ G+ + G +   L  F E   +
Sbjct: 505 FLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSR 564

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +P+ V++  +I+ LC  G++ +A ++F ++   +  PD  +Y ++L  L R +R
Sbjct: 565 G----VAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDALSRCER 619

Query: 524 MLDVMMLLADMIKMGIVP 541
           M +  +L   M   G  P
Sbjct: 620 MEEARLLSFHMKLQGCAP 637



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 211/442 (47%), Gaps = 12/442 (2%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L++  C  G + +A+ L DEM      P +V +T++I+GLC E ++ EA S+       G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             P+  TYN  +DG CK   V+ A +   +M      P  VT+  L+DGL K G L  A 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M + G  P +  Y  +IDG  KAG + EA  +  +M      PD F Y  LI GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 305 CGVGQLEGAEGLLQKMYK----EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
             +G+L+ A   L +M +     G+  +VV +N +I   C  G++E AL+   ++ +  +
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSL 250

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +    TF+ L+   CKA   + A+    +M  +   P +  +T+L+DG  K G + E L 
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
             KE +E    P   T +S+I GL K GR+      F E  ++   GY  P+ V YAA+I
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR---GY-EPDAVTYAALI 366

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
                   I KA +++  M          TY  +L GL +A R+ +       M + G V
Sbjct: 367 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 426

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
              V    ++ G+   G++ +A
Sbjct: 427 ATVVTYSALMDGFCSEGNVSAA 448



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GLCK G+L  A    + + +    P++  +  +I+G C+   L EA S+     +  
Sbjct: 15  LLNGLCKTGQLDRA---MLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD  TYN+ I GLC   +++ A  LL+KM ++  L   VTY +L+DG  K G +++A+
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  QM EKG  P + T++ +IDG  KAG ++ A  ++ +M+     PD  V+TALI GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 410 SKDGNMKETLRLYKEMLE----AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +K G + E L    +M+E      + P V   + +I  L  +G + +AL +F E  D  D
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLD 251

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                  H  +  ++ ALC   +  +A      M      P   TYT+++ G L+  R+ 
Sbjct: 252 -----LTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
           + ++ L + ++ G +PDAV    ++ G  + G ++    C  F
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEG--CERF 347



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 156/303 (51%), Gaps = 4/303 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           V   L++G CK G L  AM L  EM     SPD+  + ++I GLC   +L+ A  +L++ 
Sbjct: 11  VCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G   + VTYN  IDG CK   ++ A  +  +M EK   P  VT+++L+DG  KAG +
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D AM +  +MV K   P +  +T +IDGLSK G ++E  R++ +ML     P  F  ++L
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL K G++  AL +  +  +        P+ V++  +I+ LC  G +  A   F ++ 
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL- 246

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            D+L   + T+  ++  L +A+R  + +  +  M +    P       +V G+ + G L 
Sbjct: 247 DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 561 SAF 563
            A 
Sbjct: 307 EAL 309



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 8/175 (4%)

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+ + LV D  V TAL++GL K G +   + L  EM     +P +   + +I+GL +  R
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKR 56

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A +  LE+  +     C P++V Y   I  LC   ++  A +L   M      P   
Sbjct: 57  LDEAFS-VLERAVRAG---CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 112

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           TYT ++ GLL+A R+ + M +L  M++ G  P      V++ G  + G ++ A R
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARR 167


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 255/540 (47%), Gaps = 47/540 (8%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+++ CN +L  L      +   E YE MV+ G++  V+T+  ++D C   GD+ +   
Sbjct: 236 LPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDK 295

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           ++ EM  + IE + V Y ILI+G     KM EA      M+  G     Y++N L++GYC
Sbjct: 296 IWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYC 355

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K    + A     EML+  + P   T+ + +  LC+ G +  A      MA     P++ 
Sbjct: 356 KQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVV 411

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G+ K     EA  L  +++   I+P + TYN LI GLC  G LEGA+ L ++M
Sbjct: 412 SYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEM 471

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL---------- 370
             + I  +V+TY +L+ G+ K G++  A  +  +M  KG++P+   +++           
Sbjct: 472 TSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDS 531

Query: 371 --------------------------IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
                                     IDG CK GN++ A+    ++    LVPD V +T 
Sbjct: 532 EKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTT 591

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I G  + G  K    LY EML  +++PSV T   LIHG  K GR+  A  +  E   + 
Sbjct: 592 VIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRG 651

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN + + A++  +C  G I +A +    M  + + P+  +YT ++       + 
Sbjct: 652 ----VRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKW 707

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD---LKSAFRCSEFLKESRIGSSETEG 581
            +V+ L  +M+   I PD   ++ + +  +++ +   L S+ +  E  ++ R  S   E 
Sbjct: 708 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESMALDSSGKQPEQQQQPRGSSGNGEA 767



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 223/435 (51%), Gaps = 7/435 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           K L  F++MI KG  P+V    I++  L +   M +A+ ++ +M   G++P + T+N ++
Sbjct: 222 KCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTML 281

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D   K  D+ R  + + EM   N++ + VT+ +L++G  K G++  A  F   M + G  
Sbjct: 282 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFP 341

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
              + +N LI+G+CK G   EA  +  EM    I P   TYNI I+ LC  G+++ A  L
Sbjct: 342 VTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAREL 401

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M       +VV+YN+L+ GY K     +A  +   +    + P++VT+++LIDG C+
Sbjct: 402 LSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCE 457

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +GN++ A  L  EM  + + PDV+ +T L+ G  K+GN+     +Y EML   I P  + 
Sbjct: 458 SGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYA 517

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++   G  + G    A     E   +    + +P+  +Y   I  LC  G + KA +  
Sbjct: 518 YTTRTVGELRLGDSEKAFRLHEEMVAE---DHHAPDLTIYNVRIDGLCKVGNLEKAIEFQ 574

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             +    L PD+ TYTT++RG L   R      L  +M+   + P  +   V++ G+ + 
Sbjct: 575 RKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKA 634

Query: 557 GDLKSAFRCSEFLKE 571
           G L+ AF+ S  +K+
Sbjct: 635 GRLEQAFQYSTEMKK 649



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 219/446 (49%), Gaps = 16/446 (3%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE-----VLPAIQACNALLNGLIKKGKFDSV 103
           +F+   ++ LI  FS+ G +EEA   +  ++     V P   + N L+ G  K+G FD  
Sbjct: 306 EFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPY--SFNPLIEGYCKQGLFDEA 363

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           W   +EM+  G+     TY + I   C  G +  A  L   M      P VV Y  L+HG
Sbjct: 364 WGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHG 419

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                K VEA  +F  ++   + P++ TYN L+DG C+  ++  A     EM    + P+
Sbjct: 420 YIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPD 479

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+T+  L+ G  K G L  A   +  M + G+ P+ + Y     G  + G+  +A  L  
Sbjct: 480 VITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHE 539

Query: 284 EM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           EM  +   +PD+  YN+ I GLC VG LE A    +K+++ G++ + VTY ++I GY ++
Sbjct: 540 EMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEK 599

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G  + A  +  +M  K + P+V+T+  LI G  KAG ++ A    TEM  + + P+V+  
Sbjct: 600 GRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 659

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            AL+ G+ K GN+ E  R   +M E  I+P+ ++ + LI       +    +  + E  D
Sbjct: 660 NALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLD 719

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQ 488
           K       P+   + A+ + L  D +
Sbjct: 720 KE----IEPDGYTHRALFKHLEKDHE 741



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 218/459 (47%), Gaps = 9/459 (1%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E+M+  G +  V    +++        + KA  +++ M+  GI PTV+ +  ++     
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +   + ++  M+   +  +  TYN L++G+ K   +  A  F+ +M          +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L++G CK G    A      M   G++P    YN  I   C+ G + +A  L S M 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM- 405

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PDV +YN L+ G   + +   A  L   +    I  ++VTYN+LIDG C+ G++E
Sbjct: 406 ---AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  +MT + + P+V+T+++L+ G  K GN+  A  +Y EM+ K + PD   +T   
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522

Query: 407 DGLSKDGNMKETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            G  + G+ ++  RL++EM+ E    P +   +  I GL K G +  A+ F      K  
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEF----QRKIF 578

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P+HV Y  +I+     G+   A  L+ +M S  L P   TY  ++ G  +A R+ 
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                  +M K G+ P+ + +  ++ G  + G++  A+R
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYR 677



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 49  KFNPSVFS--TLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSV 103
           + +PSV +   LI   ++ G +E+A       +K  V P +   NALL+G+ K G  D  
Sbjct: 616 RLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEA 675

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           + +  +M   G+  +  +Y +LI   C      + + L+ EM+DK IEP    +  L   
Sbjct: 676 YRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 735

Query: 164 LCNENKMVEAES 175
           L  +++ +  +S
Sbjct: 736 LEKDHESMALDS 747


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 273/554 (49%), Gaps = 20/554 (3%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI    + G   EAL VYR++    + P+++  +AL+  L KK   + V   
Sbjct: 190 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVL 249

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            +EM   GL  +V T+ + I      G + +A  +F  M D+G  P +V YT+LI  LCN
Sbjct: 250 LKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 309

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++  A+ +F  M+  G  P+   Y  L+D +    D++   EF+ +M      P+VVT
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F +L+D LCK  +   A   F  M K G+ PN+  YN LI G  +AG + +A+ L   ME
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P  +TY   I      G+   A    +KM  +GI+ N+V  N+ +    + G + 
Sbjct: 430 SVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLR 489

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A ++ + + E G+ P+ VT++ ++    K G +D A+ L +EM+     PDV+V  +LI
Sbjct: 490 EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L K G + E  +++  M + K++P+V T ++L+ GL K GR+  A+  F     K   
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK-- 607

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             CSPN + +  ++   C + ++  A K+FS M   + +PD  TY T++ GL++  ++  
Sbjct: 608 --CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA------------FRCSEFLKESRI 574
                  + K  + PD V    ++ G  + G +  A            FR +    E  +
Sbjct: 666 AFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 575 GSSETEGHTTRSFL 588
           G +  E    ++ +
Sbjct: 725 GGTLVEAEMDKAII 738



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 242/531 (45%), Gaps = 9/531 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFD 101
           +I + +   + T+  A S  G + +   V  K+     VL A  + N L++ LI+ G   
Sbjct: 151 KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAY-SYNGLIHLLIQSGFCG 209

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              E Y  MV  GL   + TY  L+     + D    + L  EM D G+ P V  +TI I
Sbjct: 210 EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICI 269

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             L    K+ EA  +FR M + G  P+L TY  L+D  C    +  A E + +M  +  +
Sbjct: 270 RVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHK 329

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+ V +  L+D     G+L     F+  M   G  P++  +  L+D  CKA +  EA + 
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M K  I P++ TYN LI GL   G++E A  LL  M   G+     TY + ID + K
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G+  KA+    +M  KG+ PN+V  ++ +    + G +  A  ++  +    L PD V 
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  ++   SK G + E + L  EM+     P V  V+SLI  L+K GR+  A   F    
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF---- 565

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D+      SP  V Y  ++  L  +G++ KA +LF  M      P+  ++ T+L    + 
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKN 625

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             +   + + + M  M   PD +    ++ G  +   +  AF     LK+S
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS 676



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 244/530 (46%), Gaps = 16/530 (3%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           L+++E     P+ ++  T I  F + G   +A+  + K++   ++P I ACNA L  L +
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+       +  +   GL  D VTY +++ C    G V +A+NL  EMI  G EP V++
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
              LI  L    ++ EA  MF  M++  + P + TYN L+ G  K   V +A+E +  M+
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                PN ++F  L+D  CK  E+  A   F  M      P++  YN +I G  K   + 
Sbjct: 605 XKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILANVVTYNSL 335
            A     +++K  + PD  T   L+ GL   GQ+  A  + +  MY+     N   +  L
Sbjct: 665 HAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-S 394
           + G   E +M+KA+    ++   G+         L+   CK      A  ++ +   K  
Sbjct: 724 MGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL--IHGLFKNGRISN 452
           + P +  +  LI  L +    ++   L+K+M      P  FT + L  +HG  K+G+I+ 
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG--KSGKITE 841

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
               + E   +     C P+ + Y  +I +L     + KA   F D+ S + RP   TY 
Sbjct: 842 LFELYKEMISRR----CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++ GL +  R+ + M L  +M   G  P+  I  +++ GY + GD ++A
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 247/529 (46%), Gaps = 45/529 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++ ++  +S++G ++EA+ +  ++      P +   N+L++ L K G+ D  W+ ++ M
Sbjct: 509  TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                L   VVTY  L+     +G V KA+ LF+ MI K   P  + +  L+   C  +++
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              A  MF  M      P++ TYN ++ G  K   VN A  F+H+ L  ++ P+ VT   L
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTL 687

Query: 231  MDGLCKVGELRAA---GNFFVHMAKFGVFPN-------------------IFVYNCLIDG 268
            + GL K G++  A      F++  +F V  +                   IF    +++G
Sbjct: 688  LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 269  HCKAGNLFEAMS--LCSE-------------MEKFEISPDVFTYNILIKGLCGVGQLEGA 313
             C+  +    +   LC                +K  ISP + +YN LI  L  V   E A
Sbjct: 748  ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L + M   G   +  T+N L+  + K G + +   +  +M  +  +P+ +T++ +I  
Sbjct: 808  WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              K+ N+D A+  + ++V     P    +  LIDGL+K G ++E +RL++EM +    P+
Sbjct: 868  LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
                + LI+G  K G    A   F    ++       P+   Y  ++  LC  G++ +A 
Sbjct: 928  CAIFNILINGYGKIGDTETACQLFKRMVNEG----IRPDLKSYTILVDCLCLAGRVDEAL 983

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
              F++++S  L PD   Y  ++ GL +++RM + + L  +M   GIVPD
Sbjct: 984  YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 223/464 (48%), Gaps = 12/464 (2%)

Query: 21   VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV 80
            V   L+K  K +H  +  F+ L     P  +     TL+    + G I +A+ + R    
Sbjct: 653  VIYGLIKENKVNHA-FWFFHQLKKSMHP--DHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 81   LPAIQACNA----LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
                +   +    L+ G + + + D    F EE+VL G+  +      L+   C     +
Sbjct: 710  QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 137  KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  +FD+   K GI PT+  Y  LI  L   +   +A  +F+ M+  G  P+ +T+N L
Sbjct: 770  YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            +  + K   +    E Y EM+    +P+ +T+ +++  L K   L  A +FF  +     
Sbjct: 830  LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 256  FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             P    Y  LIDG  K G L EAM L  EM  +   P+   +NILI G   +G  E A  
Sbjct: 890  RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949

Query: 316  LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L ++M  EGI  ++ +Y  L+D  C  G +++AL   +++   G++P+ + ++ +I+G  
Sbjct: 950  LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 376  KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            K+  ++ A+ LY EM  + +VPD+  + +L+  L   G +++  R+Y+E+  A + P VF
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVF 1069

Query: 436  TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            T ++LI G   +    +A   +  K    DG  C+PN   YA +
Sbjct: 1070 TYNALIRGYSLSENPEHAYTVY--KNMMVDG--CNPNIGTYAQL 1109



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 216/449 (48%), Gaps = 4/449 (0%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +F+ M  K I   +  Y  +   L     + +  ++   MR+ G V N Y+YN L+    
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +      ALE Y  M+   L+P++ T+  LM  L K  +          M   G+ PN++
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +   I    +AG + EA  +   M+     PD+ TY +LI  LC  GQLE A+ L  KM
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   + V Y +L+D +   GD++      SQM   G  P+VVTF+ L+D  CKA + 
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A   +  M  + ++P++  +  LI GL + G +++ L+L   M    + P+ +T  + 
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I    K+G    A+  F    +K       PN V   A + +L   G++ +A  +F+ +R
Sbjct: 444 IDYFGKSGETGKAVETF----EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            + L PD+ TY  M++   +  ++ + + LL++MI+ G  PD ++   ++    + G + 
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLG 589
            A++  + +K+ ++  +    +T  S LG
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 256/555 (46%), Gaps = 55/555 (9%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI +  + G ++EA  ++   + +++ P +   N LL+GL K+G+     E +E M
Sbjct: 544  VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +      + +++  L+DC C   +V  AL +F +M     +P V+ Y  +I+GL  ENK+
Sbjct: 604  IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663

Query: 171  VEAESMFRSMRE---------CGVVPNLYT--------------------------YNAL 195
              A   F  +++         C ++P L                            +  L
Sbjct: 664  NHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723

Query: 196  MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK-VGELRAAGNFFVHMAKFG 254
            M G    A++++A+ F  E++ + +         L+  LCK   EL A   F     K G
Sbjct: 724  MGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLG 783

Query: 255  VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            + P +  YNCLI    +     +A  L  +M+    +PD FT+N+L+      G++    
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             L ++M       + +TYN +I    K  +++KAL     +      P   T+  LIDG 
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 375  CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
             K G ++ AM L+ EM      P+  +F  LI+G  K G+ +   +L+K M+   I P +
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             + + L+  L   GR+  AL +F E   K+ G    P+ + Y  II  L    ++ +A  
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNEL--KSTG--LDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 495  LFSDMRSDNLRPDNCTYTTM-----LRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQV 548
            L+++MR+  + PD  TY ++     L G++ +AKRM + + L       G+ PD      
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL------AGLEPDVFTYNA 1073

Query: 549  MVRGYQENGDLKSAF 563
            ++RGY  + + + A+
Sbjct: 1074 LIRGYSLSENPEHAY 1088



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 154/619 (24%), Positives = 268/619 (43%), Gaps = 64/619 (10%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCY----SVFNALNSLEIPK----------F 50
           L NA   +NA+ L   +  N     KP  V Y      FN    L+  K          +
Sbjct: 307 LCNAGQLENAKELFVKMKAN---GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            P V  F+ L+    +    +EA   +   RK  +LP +   N L+ GL++ G+ +   +
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M   G+     TY   ID     G+  KA+  F++M  KGI P +V     ++ L 
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA++MF  +RE G+ P+  TYN +M  Y KV  V+ A+    EM+ +  +P+V+
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
               L+D L K G +  A   F  M    + P +  YN L+ G  K G + +A+ L   M
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              + SP+  ++N L+   C   ++E A  +  KM       +V+TYN++I G  KE  +
Sbjct: 604 IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-------VIKSLVPD 398
             A     Q+ +K + P+ VT  +L+ G  K G I  A+ +  +        V +S   D
Sbjct: 664 NHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722

Query: 399 V-------------VVFTA--LIDGLSKDGNM---------KETLRLYKEMLEAK----- 429
           +             ++F    +++G+ ++ +          K    LY   +  K     
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKL 782

Query: 430 -ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I+P++ + + LI  L +      A + F  K  K  G  C+P+   +  ++      G+
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLF--KDMKNVG--CAPDAFTFNMLLAVHGKSGK 838

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           I +  +L+ +M S   +PD  TY  ++  L ++  +   +    D++     P       
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 549 MVRGYQENGDLKSAFRCSE 567
           ++ G  + G L+ A R  E
Sbjct: 899 LIDGLAKVGRLEEAMRLFE 917


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/519 (31%), Positives = 258/519 (49%), Gaps = 10/519 (1%)

Query: 27  KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA 86
           ++ +PH     + N ++S +  + N   + T++  F E    +E   ++ K+ +   +  
Sbjct: 158 RTSRPH-AALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM-LASGVSL 214

Query: 87  C----NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           C    N LL+ L KKG      +  ++++  G++ ++ TY   I   C +G++  A+ + 
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             +ID+G +P VV Y  LI+GLC  +K  EAE     +   G+ P+ +TYN L+ GYCK 
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V  A       + +   P+  T+  L+DGLC  GE   A   F      G+ PN+ +Y
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI G    G + EA  L SEM +  + P+V T+NIL+ GLC +G +  A+GL++ M  
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +G   ++ T+N LI GY  +  ME AL +   M + GV+P+V T++SL++G CK    + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            M  Y  MV K   P++  F  L++ L +   + + L L +EM    + P   T  +LI 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  KNG +  A   F  K ++     CS     Y  II A      +  A KLF +M   
Sbjct: 575 GFCKNGDLDGAYTLF-RKMEEVYMVSCSTP--TYNIIIHAFTEKLNVTMAEKLFQEMVDR 631

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L PD  TY  M+ G  +   +      L +M++ G +P
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 250/521 (47%), Gaps = 7/521 (1%)

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G ++EA+ V+ +++     P + + NA+++ L+  G FD   + Y  M   G+  D
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V ++ + +   C       AL L + M  +G E  VV Y  ++ G   EN   E   +F 
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   GV   L T+N L+   CK  DV    +   +++   + PN+ T+   + GLC+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           EL AA      +   G  P++  YN LI G CK     EA     ++    + PD FTYN
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G ++ AE +L      G + +  TY SLIDG C EG+  +AL++ ++   K
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++PNV+ +++LI G    G I  A  L +EM  K L+P+V  F  L++GL K G + + 
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L K M+     P +FT + LIHG     ++ NA    LE  D        P+   Y +
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA----LEILDVMMDNGVDPDVYTYNS 501

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC   +     + +  M      P+  T+  +L  L R  ++   + LL +M    
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           + PDAV    ++ G+ +NGDL  A+     ++E  + S  T
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 209/410 (50%), Gaps = 4/410 (0%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           PK +   ++ LI    +    +EA     K+    + P     N L+ G  K G      
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
                 V  G V D  TY  LID  C +G+  +AL LF+E + KGI+P V++Y  LI GL
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            N+  ++EA  +   M E G++P + T+N L++G CK+  V+ A      M+     P++
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF +L+ G     ++  A      M   GV P+++ YN L++G CK     + M     
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +   +P++FT+NIL++ LC   +L+ A GLL++M  + +  + VT+ +LIDG+CK GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 345 MEKALSVCSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++ A ++  +M E   V  +  T++ +I    +  N+  A  L+ EMV + L PD   + 
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            ++DG  K GN+    +   EM+E    PS+ T+  +I+ L    R+  A
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 174/357 (48%), Gaps = 6/357 (1%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P  F+  +LI      G    AL ++ +     + P +   N L+ GL  +G      
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +   EM   GL+ +V T+ +L++  C  G V  A  L   MI KG  P +  + ILIHG 
Sbjct: 412 QLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             + KM  A  +   M + GV P++YTYN+L++G CK +     +E Y  M+     PN+
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF +L++ LC+  +L  A      M    V P+   +  LIDG CK G+L  A +L  +
Sbjct: 532 FTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 285 MEK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           ME+ + +S    TYNI+I        +  AE L Q+M    +  +  TY  ++DG+CK G
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           +++       +M E G  P++ T   +I+  C    +  A G+   MV K LVP+ V
Sbjct: 652 NVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 193/408 (47%), Gaps = 4/408 (0%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +Y   +     + K+ EA ++F  M      P +++YNA+M         ++A + Y  M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + P+V +F + M   C+     AA     +M+  G   N+  Y  ++ G  +    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            E   L  +M    +S  + T+N L+  LC  G ++  E LL K+ K G+L N+ TYN  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G C++G+++ A+ +  ++ ++G +P+VVT++ LI G CK      A     ++V + L
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD   +  LI G  K G ++   R+    +     P  FT  SLI GL   G  + AL 
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E   K       PN +LY  +I+ L   G IL+A++L S+M    L P+  T+  ++
Sbjct: 378 LFNEALGKG----IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILV 433

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            GL +   + D   L+  MI  G  PD     +++ GY     +++A 
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 219/411 (53%), Gaps = 11/411 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S   T I   SEM          R +E+ P   A  +++  L  +G+        E+MV+
Sbjct: 299 SELETAIKLLSEMA--------ARGLELNPV--AYTSVIALLCDEGQVSDAVRVVEDMVM 348

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+V D   +  ++   C +GD+  A N FDEM  +G+    V YT LI+GLC   ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           AE + + M + G+  +  TY  L+DGYCKV  +  A   +++M+   + PNVVT+  L D
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK G++ AA      M   G+  NIF YN LI+G CKAGNL +AM    +M++  + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV+TY  +I  LC   +L+ A  LLQ+M  +GI   +VTYN L++G+C  G +E    + 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M EK + PN  T++SL+   C   N+ +   +Y  M+ + +VP+   +  LI G  K 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            NMKE L  + EM+E     +  + ++LI  L K  + + A   F EK  K
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF-EKMRK 698



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 254/504 (50%), Gaps = 21/504 (4%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  + P+ ++CNA+L  L      D   + ++E+       +  +Y +L+   C  G +
Sbjct: 218 RQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAGRI 269

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  LFDEM      P VV Y I++HG C  +++  A  +   M   G+  N   Y ++
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C    V+ A+    +M+ H +  +   F  +M G C+ G+L AA N+F  M K G+
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +   Y  LI+G C+AG L EA  +  EME   +  D  TY +LI G C VG++  A  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  KM ++ +  NVVTY +L DG CK+GD+  A  +  +M  KG+E N+ T++SLI+G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KAGN++ AM    +M    L PDV  +T +I  L +   +     L +EML+  I P++ 
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 436 TVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T + L++G   +GR+      L + LEK          PN   Y ++++  C +  +   
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKN-------IHPNTTTYNSLMKQYCIEKNMKST 619

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           ++++  M S  + P+  TY  +++G  +A+ M + +   ++MI+ G    A     ++R 
Sbjct: 620 TEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679

Query: 553 YQENGDLKSAFRCSEFLKESRIGS 576
             +      A R  E +++ R+ +
Sbjct: 680 LNKKKKFTEARRLFEKMRKERLTA 703



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 209/392 (53%), Gaps = 5/392 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           + NP  ++++I    + G + +A+ V   +    V+        +++G  +KG   +   
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +++EM   GL AD VTY  LI+  C  G++ +A  +  EM DKG++   V YT+LI G C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              KM EA  +   M +  V PN+ TY AL DG CK  DV  A E  HEM    L+ N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G L  A    + M + G+ P+++ Y  +I   C++  L  A SL  EM
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I P + TYN+L+ G C  G++EG + LL+ M ++ I  N  TYNSL+  YC E +M
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M  + V PN  T++ LI G CKA N+  A+  ++EM+ K        + AL
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKIT--PSVF 435
           I  L+K     E  RL+++M + ++T  P V+
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 239/466 (51%), Gaps = 10/466 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           E+P+ N   ++ L+ A    G I++A  ++ ++   P +     +++G     + ++  +
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIK 306

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM   GL  + V Y  +I   C +G V  A+ + ++M+  G+     ++T ++ G C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  +  A + F  M++ G+  +  TY AL++G C+  ++  A     EM    L  + V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 226 TFGVLMDGLCKVGELRAAGNFFVH--MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           T+ VL+DG CKVG++  A  F VH  M +  V PN+  Y  L DG CK G++  A  L  
Sbjct: 427 TYTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    +  ++FTYN LI GLC  G LE A   +  M + G+  +V TY ++I   C+  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++++A S+  +M +KG++P +VT++ L++G C +G ++    L   M+ K++ P+   + 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+     + NMK T  +YK ML  ++ P+  T + LI G  K   +  AL F  E  +K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL--RPD 507
                 S     Y A+I+ L    +  +A +LF  MR + L   PD
Sbjct: 665 GFRLTASS----YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 206/400 (51%), Gaps = 15/400 (3%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +R+ G+ P+  + NA++   C++  ++ A++ + E+     + N  ++ +L+  LC  G 
Sbjct: 217 LRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           ++ A   F  MA     P++  Y  ++ G+C    L  A+ L SEM    +  +   Y  
Sbjct: 269 IKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  GQ+  A  +++ M   G++ +   + +++ G+C++GD+  A +   +M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +  + VT+++LI+G C+AG +  A  +  EM  K L  D V +T LIDG  K G M E  
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            ++ +M++ ++TP+V T ++L  GL K G +  A     E   K        N   Y ++
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG----LELNIFTYNSL 501

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC  G + +A +   DM    L+PD  TYTT++  L ++K +     LL +M+  GI
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
            P  V   V++ G+  +G ++   R  E++ E  I  + T
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 255/491 (51%), Gaps = 7/491 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKF--DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG 133
           R++ V P++QA NA+L+ L +       +  + +  +V   L  +  T+ +L+   C +G
Sbjct: 159 RRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKG 218

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
            +  AL+    M   G+ P  V Y  L++  C +  + EA ++   M++ GV P   TYN
Sbjct: 219 TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L+  Y ++  + +A +    M  +  +P++ T+ VL  GLC+ G++  A      M + 
Sbjct: 279 TLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERL 338

Query: 254 G-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
           G + P++  YN L D   K     +A+ L  EM +  +   + T+NI+IKGLC  G+LEG
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEG 398

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A G L KM  +G+  +V+TYN+LI  +CK G++ KA ++  +M  +G++ +  T ++++ 
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLY 458

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK    + A GL      +  +PD V +  ++    K+ N +  LRL+ EM+E K+TP
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S+ T ++LI GL + GR+  A++   E  +K       P+   Y  II A C +G +  A
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKG----LVPDDTTYNIIIHAYCKEGDLENA 574

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +  + M  ++ +PD  T  T++ GL    ++   + L    ++ G   D +    +++ 
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQT 634

Query: 553 YQENGDLKSAF 563
             ++GD+ +A 
Sbjct: 635 MCKDGDVDTAL 645



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 244/507 (48%), Gaps = 35/507 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+ A++ +G I++A  V   +      P +   N L  GL + GK D  +   +EM
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335

Query: 111 VLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
              G L+ DVVTY  L D C        AL L +EM +KG++ T+V + I+I GLC + +
Sbjct: 336 ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGE 395

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A      M + G+ P++ TYN L+  +CK  ++ +A     EM+   L+ +  T   
Sbjct: 396 LEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNT 455

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++  LCK      A        + G  P+   Y  ++  + K  N   A+ L  EM + +
Sbjct: 456 VLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKK 515

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++P + TYN LIKGL  +G+L+ A   L ++ ++G++ +  TYN +I  YCKEGD+E A 
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAF 575

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
              ++M E   +P+VVT ++L++G C  G +D A+ L+   V K    DV+ +  LI  +
Sbjct: 576 QFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTM 635

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGG 467
            KDG++   L  + +M    + P  FT + ++  L + GR   A N    L ++      
Sbjct: 636 CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQS 695

Query: 468 YCSP-----------------------------NHVLYAAIIQALCYDGQILKASKLFSD 498
           + SP                                 Y  ++  LC  GQ  +A  +  +
Sbjct: 696 FSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDE 755

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRML 525
           M    +  D+ TY T++ GL++ ++ L
Sbjct: 756 MMQKGMSVDSSTYITLMEGLVKRQKRL 782



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 205/418 (49%), Gaps = 7/418 (1%)

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESM--FRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           + P++     ++  L          S+  FRS+    + PN YT+N L+  +C    +  
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL     M    L P+ VT+  L++  C+ G L  A      M K GV P    YN L+ 
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-IL 326
            + + G + +A  +   M      PD++TYN+L  GLC  G+++ A  L  +M + G +L
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VVTYN+L D   K      AL +  +M EKGV+  +VT + +I G CK G ++ A+G 
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M    L PDV+ +  LI    K GN+ +   L  EM+   +    FT++++++ L K
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             R   A         +   G+  P+ V Y  ++ A   +     A +L+ +M    L P
Sbjct: 463 EKRYEEAQGLLQSPPQR---GFM-PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              TY T+++GL R  R+ + +  L ++++ G+VPD     +++  Y + GDL++AF+
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQ 576



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 208/425 (48%), Gaps = 11/425 (2%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGEL-- 240
           G +P+    +A +  Y ++   + A +  H +     ++P++     ++  L +      
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
           +A+ + F  +    + PN + +N L+  HC  G L +A+S  S M+ F +SPD  TYN L
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           +   C  G L  A  LL +M K+G+     TYN+L+  Y + G +++A  V   MT  G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           EP++ T++ L  G C+AG +D A  L  EM  + +L+PDVV +  L D   K     + L
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           RL +EM E  +  ++ T + +I GL K+G +  AL    +  D  DG   +P+ + Y  +
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMAD--DG--LAPDVITYNTL 421

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I A C  G I KA  L  +M    L+ D  T  T+L  L + KR  +   LL    + G 
Sbjct: 422 IHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGF 481

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT---RSFLGHLKPTVY 596
           +PD V    ++  Y +  + + A R  + + E ++  S +  +T     S +G LK  + 
Sbjct: 482 MPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAID 541

Query: 597 KEQDL 601
           K  +L
Sbjct: 542 KLNEL 546



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 185/377 (49%), Gaps = 9/377 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGL 94
           LN +      P V  ++TLI A  + G+I +A       V R +++       N +L  L
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKL--DTFTLNTVLYNL 460

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K+ +++      +     G + D V+YG ++     + +   AL L+DEMI+K + P++
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  LI GL    ++ EA      + E G+VP+  TYN ++  YCK  D+  A +F+++
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+ ++ +P+VVT   LM+GLC  G+L  A   F    + G   ++  YN LI   CK G+
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+   ++ME   + PD FTYN+++  L   G+ E A+ +L K+ + G L+   +   
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPL 700

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L      E +  K      +  E   +     ++ L++G C +G    A  +  EM+ K 
Sbjct: 701 LKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKG 760

Query: 395 LVPDVVVFTALIDGLSK 411
           +  D   +  L++GL K
Sbjct: 761 MSVDSSTYITLMEGLVK 777


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 219/411 (53%), Gaps = 11/411 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S   T I   SEM          R +E+ P   A  +++  L  +G+        E+MV+
Sbjct: 299 SELETAIKLLSEMA--------ARGLELNPV--AYTSVIALLCDEGQVSDAVRVVEDMVM 348

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+V D   +  ++   C +GD+  A N FDEM  +G+    V YT LI+GLC   ++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           AE + + M + G+  +  TY  L+DGYCKV  +  A   +++M+   + PNVVT+  L D
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLCK G++ AA      M   G+  NIF YN LI+G CKAGNL +AM    +M++  + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV+TY  +I  LC   +L+ A  LLQ+M  +GI   +VTYN L++G+C  G +E    + 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M EK + PN  T++SL+   C   N+ +   +Y  M+ + +VP+   +  LI G  K 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            NMKE L  + EM+E     +  + ++LI  L K  + + A   F EK  K
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF-EKMRK 698



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 254/504 (50%), Gaps = 21/504 (4%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  + P+ ++CNA+L  L      D   + ++E+       +  +Y +L+   C  G +
Sbjct: 218 RQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAGRI 269

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  LFDEM      P VV Y I++HG C  +++  A  +   M   G+  N   Y ++
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C    V+ A+    +M+ H +  +   F  +M G C+ G+L AA N+F  M K G+
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +   Y  LI+G C+AG L EA  +  EME   +  D  TY +LI G C VG++  A  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  KM ++ +  NVVTY +L DG CK+GD+  A  +  +M  KG+E N+ T++SLI+G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KAGN++ AM    +M    L PDV  +T +I  L +   +     L +EML+  I P++ 
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 436 TVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T + L++G   +GR+      L + LEK          PN   Y ++++  C +  +   
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKN-------IHPNTTTYNSLMKQYCIEKNMKST 619

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           ++++  M S  + P+  TY  +++G  +A+ M + +   ++MI+ G    A     ++R 
Sbjct: 620 TEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679

Query: 553 YQENGDLKSAFRCSEFLKESRIGS 576
             +      A R  E +++ R+ +
Sbjct: 680 LNKKKKFTEARRLFEKMRKDRLTA 703



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 209/392 (53%), Gaps = 5/392 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           + NP  ++++I    + G + +A+ V   +    V+        +++G  +KG   +   
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +++EM   GL AD VTY  LI+  C  G++ +A  +  EM DKG++   V YT+LI G C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              KM EA  +   M +  V PN+ TY AL DG CK  DV  A E  HEM    L+ N+ 
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G L  A    + M + G+ P+++ Y  +I   C++  L  A SL  EM
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I P + TYN+L+ G C  G++EG + LL+ M ++ I  N  TYNSL+  YC E +M
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   M  + V PN  T++ LI G CKA N+  A+  ++EM+ K        + AL
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKIT--PSVF 435
           I  L+K     E  RL+++M + ++T  P V+
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 239/466 (51%), Gaps = 10/466 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           E+P+ N   ++ L+ A    G I++A  ++ ++   P +     +++G     + ++  +
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIK 306

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM   GL  + V Y  +I   C +G V  A+ + ++M+  G+     ++T ++ G C
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  +  A + F  M++ G+  +  TY AL++G C+  ++  A     EM    L  + V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 226 TFGVLMDGLCKVGELRAAGNFFVH--MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           T+ VL+DG CKVG++  A  F VH  M +  V PN+  Y  L DG CK G++  A  L  
Sbjct: 427 TYTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    +  ++FTYN LI GLC  G LE A   +  M + G+  +V TY ++I   C+  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++++A S+  +M +KG++P +VT++ L++G C +G ++    L   M+ K++ P+   + 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+     + NMK T  +YK ML  ++ P+  T + LI G  K   +  AL F  E  +K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL--RPD 507
                 S     Y A+I+ L    +  +A +LF  MR D L   PD
Sbjct: 665 GFRLTASS----YNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPD 706



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 206/400 (51%), Gaps = 15/400 (3%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +R+ G+ P+  + NA++   C++  ++ A++ + E+     + N  ++ +L+  LC  G 
Sbjct: 217 LRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           ++ A   F  MA     P++  Y  ++ G+C    L  A+ L SEM    +  +   Y  
Sbjct: 269 IKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  GQ+  A  +++ M   G++ +   + +++ G+C++GD+  A +   +M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +  + VT+++LI+G C+AG +  A  +  EM  K L  D V +T LIDG  K G M E  
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            ++ +M++ ++TP+V T ++L  GL K G +  A     E   K        N   Y ++
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG----LELNIFTYNSL 501

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC  G + +A +   DM    L+PD  TYTT++  L ++K +     LL +M+  GI
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
            P  V   V++ G+  +G ++   R  E++ E  I  + T
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/555 (29%), Positives = 265/555 (47%), Gaps = 54/555 (9%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEV--LP-AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           +I  F  M   + A+ +YRK+E+  +P  I + N L+       K       + ++   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 115 LVADVVTYGVLIDCCCGQGDV---------------MKALNLFDEMIDKGIEPTVVIYTI 159
              DVVT+  L+   C +  +               ++A+ LFD+M++ G+ P V+ +  
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+GLC E +++EA ++   M   G+  ++ TY  +++G CK+ D   AL    +M   +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++P+VV +  ++D LCK G    A   F  M + G+ PN+F YNC+IDG C  G   +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L  +M + EI+PDV T+N LI      G+L  AE L  +M    I  + VTYNS+I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK    + A      M +    P+VVTF+++ID  C+A  +D  M L  E+  + LV + 
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL- 458
             +  LI G  +  N+     L++EM+   + P   T + L++G  +N ++  AL  F  
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 459 -----------------------EKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQ 488
                                   K D+    +CS       P+   Y  +I   C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           I  A+ LF  M+ +   PDN TY T++RG L+A  +   + L+++M   G   DA   + 
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK- 646

Query: 549 MVRGYQENGDLKSAF 563
           MV     +G L  +F
Sbjct: 647 MVADLITDGRLDKSF 661



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 221/452 (48%), Gaps = 23/452 (5%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ FD M+      T V    +I      N+   A S++R M    +  N+Y++N L+ 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRA------------ 242
            +C    ++ +L  + ++     QP+VVTF  L+ GLC   ++ E  A            
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M + G+ P +  +N LI+G C  G + EA +L ++M    +  DV TY  ++ 
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           G+C +G  + A  LL KM +  I  +VV Y+++ID  CK+G    A  + S+M EKG+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           NV T++ +IDG C  G    A  L  +M+ + + PDV+ F ALI    K+G + E  +L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            EML   I P   T +S+I+G  K+ R  +A + F            SP+ V +  II  
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIIDV 441

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C   ++ +  +L  ++    L  +  TY T++ G      +     L  +MI  G+ PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +   +++ G+ EN  L+ A    E ++ S+I
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKI 533


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 304/602 (50%), Gaps = 30/602 (4%)

Query: 1    IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVF--STL 58
            +F+ L N  ++ ++  L   + ++L+K+++   V  +VF  LN LE   F PS F     
Sbjct: 504  LFFALRNEGIFPSSDSLTL-LLDHLVKTKQ-FRVTINVF--LNILE-SDFRPSKFMYGKA 558

Query: 59   IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
            I A  ++  + + L ++ +++   + P +   N L++GL K  +     + ++EM+   L
Sbjct: 559  IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 116  VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
            +  ++TY  LID  C  G+  K+  + + M    IEP+++ +  L+ GL     + +AE+
Sbjct: 619  LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 176  MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            +   M++ G VP+ +T++ L DGY      + AL  Y   +   L+ N  T  +L++ LC
Sbjct: 679  VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 236  KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
            K G++  A          G+ PN  +YN +IDG+ + G+L  A      MEK  + PD  
Sbjct: 739  KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 296  TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
             YN LI+  C +G +E AE  + KM  +G+  +V TYN LI GY ++ + +K   +  +M
Sbjct: 799  AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 356  TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             + G  PNVV++ +LI+  CK   +  A  +  +M  + + P+V ++  LIDG    G +
Sbjct: 859  EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 416  KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            ++  R  +EM +  I  ++ T ++LI GL  NG+++ A +  LE + K       P+   
Sbjct: 919  EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG----LKPDVFT 974

Query: 476  YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMML 530
            Y ++I    + G + +   L+ +M++  ++P   TY  ++      G+   K++      
Sbjct: 975  YNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFG---- 1030

Query: 531  LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
                 +M + PD ++   ++  Y  +GD+  AF   + + E  IG  +T  ++    LG 
Sbjct: 1031 -----EMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSL--ILGQ 1083

Query: 591  LK 592
            LK
Sbjct: 1084 LK 1085



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 213/433 (49%), Gaps = 4/433 (0%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A +LF  + ++GI P+    T+L+  L    +     ++F ++ E    P+ + Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            +    K++DV + LE ++ M H  + P V  + VL+DGLCKV +++ A   F  M    
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  YN LIDG+CK GN  ++  +   M+   I P + T+N L+KGL   G +E AE
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L +M  +G + +  T++ L DGY      + AL V     + G++ N  T S L++  
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G I+ A  +    + K LVP+ V++  +IDG S+ G++         M +  + P  
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              + LI    + G + NA     ++ +K      SP+   Y  +I       +  K   
Sbjct: 798 LAYNCLIRTFCELGDMENA----EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M  +   P+  +Y T++  L +  ++L+  ++  DM   G+ P+  I  +++ G  
Sbjct: 854 LLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCC 913

Query: 555 ENGDLKSAFRCSE 567
             G ++ AFR SE
Sbjct: 914 SKGKIEDAFRFSE 926



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 198/410 (48%), Gaps = 36/410 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N  +++T+I  +S  G +  A      +E   + P   A N L+    + G  ++  +  
Sbjct: 761  NEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEV 820

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +M L G+   V TY +LI     + +  K  +L  EM D G  P VV Y  LI+ LC  
Sbjct: 821  NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKG 880

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +K++EA+ + R M + GV PN+  YN L+DG C    +  A  F  EM    ++ N+VT+
Sbjct: 881  SKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTY 940

Query: 228  GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              L+DGL   G+L  A +  + +++ G+ P++F YN LI G+  AGN+   ++L  EM+ 
Sbjct: 941  NTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKT 1000

Query: 288  FEISPDVFTYNILIKGLC-------------------------GV-------GQLEGAEG 315
              I P + TY++LI  LC                         GV       G ++ A  
Sbjct: 1001 SGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFN 1059

Query: 316  LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L ++M ++ I  +  TYNSLI G  K G + +  S+  +M  + +EP   T+  ++ G C
Sbjct: 1060 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHC 1119

Query: 376  KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +  +   A   Y EM  K L+ DV +   L+ GL ++   KE   +  EM
Sbjct: 1120 EMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 116/289 (40%), Gaps = 44/289 (15%)

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           LF A SL S   K +     F+Y +L   L     +  A  L   +  EGI  +  +   
Sbjct: 468 LFSAFSLSSPSLKHD-----FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTL 522

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+D   K       ++V   + E    P+   +   I    K  ++   + L+  M    
Sbjct: 523 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 582

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P V ++  LIDGL K   MK+  +L+ EML  ++ PS+ T ++LI G           
Sbjct: 583 ISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDG----------- 631

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                                        C DG   K+ K+   M++DN+ P   T+ T+
Sbjct: 632 ----------------------------YCKDGNPEKSFKVRERMKADNIEPSLITFNTL 663

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+GL +A  + D   +L +M   G VPDA    ++  GY  N    +A 
Sbjct: 664 LKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/364 (36%), Positives = 203/364 (55%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L  KG+        E+M + G+  D V +  +I   C +GD+  A  LF+EM  +G+   
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V +T LI+GLC   ++ EA+ + + M + G+  ++ TY  L+DGYCK  ++  A   ++
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM+   + PNVVT+  L DGLCK G++RAA      M   G+  N++ YN LI+G CK G
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           NL +AM + +EME      DV+TY  LI  LC  G+ + A  +LQ+M  +GI  ++ TYN
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYN 571

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            L++G+C  G +E    +   M EK V PNVVT++SL+   C   N+ +   +Y  M  +
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            + P+   +  LI G  K  NMKE L  ++EM+E  +  +  + S+LI  L K  + S A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691

Query: 454 LNFF 457
             FF
Sbjct: 692 RVFF 695



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 244/504 (48%), Gaps = 25/504 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +P+ F  L++         E L   R+  + P+ ++CNA+L+ L      D     + E+
Sbjct: 199 DPASFDLLLLCLPSA----ELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFREL 250

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +V ++ +L+      G +  A   FDEM      P VV Y  ++HG C   ++
Sbjct: 251 P----DKNVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGEL 303

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G+  N   Y +++   C    V+ AL    +M  H +  + V F  +
Sbjct: 304 ENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTV 363

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C  G+L AA   F  M K G+  +   +  LI+G C+AG L EA  +  EM    +
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             DV TY +LI G C  G +  A  +  +M    +  NVVTY +L DG CK+GD+  A  
Sbjct: 424 DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANE 483

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG+E NV T++SLI+G CK GN++ AM + TEM       DV  +T LID L 
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGG 467
           K G       + +EML+  I PS+ T + L++G   +GR+      L + LEK  +    
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR---- 599

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y ++++  C D  +   ++++  M S  + P+  TY  +++G  +A+ M + 
Sbjct: 600 ---PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656

Query: 528 MMLLADMIKMGIVPDAVINQVMVR 551
           +    +MI+ G+   A     ++R
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIR 680



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 247/489 (50%), Gaps = 9/489 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA 83
           N + SR P     ++F      E+P  N    + L+ A    G +++A   + ++   P 
Sbjct: 232 NAVLSRLPLDEAIALFR-----ELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPD 286

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           +     +++G   +G+ ++  +  +EM   GL ++   Y  +I   C +G V  AL + +
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLE 346

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M   G+    V++T +I G C++  +  A  +F  M++ G+  +  T+ AL++G C+  
Sbjct: 347 DMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAG 406

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           ++  A     EM+   L  +VVT+ VL+DG CK G +  A      M    V PN+  Y 
Sbjct: 407 ELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYT 466

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L DG CK G++  A  L  EM    +  +V+TYN LI GLC  G LE A  ++ +M   
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA 526

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   +V TY +LID  CK G+ ++A ++  +M +KG++P++ T++ L++G C +G ++  
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L   M+ K++ P+VV + +L+     D NMK T  +YK M   ++ P+  T + LI G
Sbjct: 587 KKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K   +  AL F  E  +K      S     Y+A+I+ L    +  +A   F  MR++ 
Sbjct: 647 HCKARNMKEALYFHQEMIEKGLRLTASS----YSALIRLLNKKKKFSEARVFFDKMRNEG 702

Query: 504 LRPDNCTYT 512
           L  +   Y+
Sbjct: 703 LTAEPDVYS 711



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 218/427 (51%), Gaps = 11/427 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ LF E+ DK     V  + IL+  L +  ++ +A   F  M      P++ TY  ++
Sbjct: 242 EAIALFRELPDKN----VCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMV 294

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYC   ++  A++   EM    L+ N   +  ++  LC  G++  A      M   GV 
Sbjct: 295 HGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVA 354

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            +  V+  +I G C  G+L  A  L  EM+K  ++ D  T+  LI GLC  G+L+ A+ +
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           LQ+M  +G+  +VVTY  LIDGYCK G+M +A  V ++M  + V PNVVT+++L DG CK
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK 474

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G++ AA  L  EM  K L  +V  + +LI+GL K GN+++ +R+  EM  A     V+T
Sbjct: 475 QGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYT 534

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI  L K+G    A N   E  DK       P+   Y  ++   C  G++    KL 
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKG----IKPSIATYNVLMNGFCMSGRVEGGKKLL 590

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M   N+RP+  TY ++++     K M     +   M    + P+     ++++G+ + 
Sbjct: 591 EWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650

Query: 557 GDLKSAF 563
            ++K A 
Sbjct: 651 RNMKEAL 657



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 200/378 (52%), Gaps = 3/378 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV--LPAIQACN-ALLNGLIKKGKFDSVWEFYEEM 110
           VF+T+I  F   G +  A  ++ +++   L A +  + AL+NGL + G+        +EM
Sbjct: 359 VFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL  DVVTY VLID  C +G++++A  + +EM+ + + P VV YT L  GLC +  +
Sbjct: 419 VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDV 478

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G+  N+YTYN+L++G CK  ++ +A+    EM     + +V T+  L
Sbjct: 479 RAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTL 538

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK GE   A N    M   G+ P+I  YN L++G C +G +     L   M +  +
Sbjct: 539 IDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV 598

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+V TYN L+K  C    ++    + + M+ + +  N  TYN LI G+CK  +M++AL 
Sbjct: 599 RPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALY 658

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +M EKG+     ++S+LI    K      A   + +M  + L  +  V++  +D   
Sbjct: 659 FHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISF 718

Query: 411 KDGNMKETLRLYKEMLEA 428
            + N++ T+ L  E++EA
Sbjct: 719 NEDNLESTITLCDELVEA 736



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 240/488 (49%), Gaps = 25/488 (5%)

Query: 94  LIKKGKFDSVWE-FYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L++  +F S    F E+ +       +D  ++ +L+ C       + +  L   +   G+
Sbjct: 172 LVRALRFPSPHRHFVEQFIFTYKAFSSDPASFDLLLLC-------LPSAELLRRLRQYGL 224

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P+      ++  L     + EA ++FR + +     N+ ++N L+        +  A +
Sbjct: 225 SPSPESCNAVLSRL----PLDEAIALFRELPD----KNVCSHNILLKALLSAGRLKDACQ 276

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            + EM   +  P+VVT+G ++ G C  GEL  A      MA  G+  N  VY  +I   C
Sbjct: 277 HFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLC 333

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G + +A+ +  +M    ++ D   +  +I G C  G L  A  L ++M K G+ A+ V
Sbjct: 334 NKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRV 393

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LI+G C+ G++++A  V  +M +KG++ +VVT++ LIDG CK GN+  A  ++ EM
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V + + P+VV +TAL DGL K G+++    L  EM    +  +V+T +SLI+GL K G +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A+      T+    G+ +  +  Y  +I  LC  G+  +A  +  +M    ++P   T
Sbjct: 514 EQAMRIM---TEMEAAGHRTDVYT-YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIAT 569

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           Y  ++ G   + R+     LL  M++  + P+ V    +++ Y  + ++KS     + + 
Sbjct: 570 YNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMH 629

Query: 571 ESRIGSSE 578
              +  +E
Sbjct: 630 SQEVAPNE 637


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 252/508 (49%), Gaps = 52/508 (10%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  LN L++ G+     + + E      V +  TYG LI   C  G + +A  L DEM D
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +GI P V ++  +I GLC   +  +A   F+++      P++ T+N L+D   K   V  
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 208 ALEFYHEMLHHNLQ--PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           A + +  M H + Q  PNVVT+  +++GLCK G+L  A      M + G  PN+  Y+ L
Sbjct: 119 AFQIFESM-HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++G CKAG   +  +L  EM +    PDV  YN L+ GLC   +L+ A  L+Q M + G 
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              VVTYNSL++ +C+   +++A  +   M+E+G  P+V+ ++++I G C+   +D A  
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN----------------MKET----------- 418
           L  +MV    VPDV+ ++ +IDGL KD                  MK+T           
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 419 --------------LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
                         L L + M+++++ P + + S +I  L K+  +  A   F   +++ 
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C PN V YAA+I  L   G++ KA ++F ++  ++ RP   TY ++L GL    R+
Sbjct: 418 ----CKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + + ++  MI     PD      ++RG
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRG 500



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 233/480 (48%), Gaps = 15/480 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + +LI    + G +++A   L   R   + P +   N ++ GL K G+F     ++
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCN 166
           + +       D++T+ +L+D     G V +A  +F+ M       P VV YT +I+GLC 
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + K+  A  +   M E G  PN+ TY+ L++G CK    ++      EM     QP+V+ 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L++GLCK   L  A      M + G +P +  YN L++  C++  +  A  L   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG--- 343
           +    PDV  YN +I GLC   +L+ A+ LL++M     + +V+TY+++IDG CK+    
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 344 ---DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
               +E A  +   M + G  PN  T++ +I+G C+A     A+ L   M+   +VPD+ 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            F+ +I  L K  ++    +++  M E +  P+    ++LI GL K G +  A+  F   
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +        P    Y +++  LC  G+I +A ++   M      PD  +Y  ++RGL R
Sbjct: 449 VESF-----RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 219/442 (49%), Gaps = 12/442 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ LF E   +   P    Y  LIHGLC   K+ +A  +   MR+ G+ P +  +N ++
Sbjct: 16  QAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVI 72

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGV 255
            G CK      AL ++  +      P+++TF +L+D L K G +  A   F  M      
Sbjct: 73  KGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQC 132

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y  +I+G CK G L  A+ L   M +    P+V TY++L++GLC  G+ +    
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LLQ+M + G   +V+ YN+L++G CK   +++AL +   M   G  P VVT++SL++  C
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           ++  +D A  L   M  +   PDV+ +  +I GL +D  + +   L K+M+ A+  P V 
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312

Query: 436 TVSSLIHGLFKNGRIS-----NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           T S++I GL K+ R+       A    LE   +T    C PN   YA +I+ LC   +  
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG---CPPNAGTYAVVIEGLCRARKSQ 369

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  L   M    + PD  +++ ++  L ++  +     +   M +    P+ V    ++
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
            G  + G++  A R  E + ES
Sbjct: 430 DGLSKGGEVDKAVRVFELMVES 451



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 214/421 (50%), Gaps = 13/421 (3%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDS 102
           K  P +  F+ L+ A  + G +EEA  ++  +    + LP +     ++NGL K GK D 
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             E  + M   G   +V+TY VL++  C  G   K   L  EM  +G +P V++Y  L++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC   ++ EA  + + M   G  P + TYN+LM+ +C+   V+RA      M      P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN------LF 276
           +V+ +  ++ GLC+   L  A      M      P++  Y+ +IDG CK         L 
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLE 334

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  +   M++    P+  TY ++I+GLC   + + A  LL++M    ++ ++ +++ +I
Sbjct: 335 AACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              CK  D++ A  +   M+E+  +PN V +++LIDG  K G +D A+ ++ E++++S  
Sbjct: 395 GSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFR 453

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P V  + +++DGL   G ++E +R+ + M+  +  P   +  +LI GL +   +  A   
Sbjct: 454 PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513

Query: 457 F 457
           F
Sbjct: 514 F 514



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 47/386 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+    + G  ++   + +++      P +   N LLNGL K  + D   E  
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+  G    VVTY  L++  C    V +A  L   M ++G  P V+ Y  +I GLC +
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN--------------------- 206
            ++ +A+++ + M     VP++ TY+ ++DG CK   V+                     
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349

Query: 207 --------------------RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
                               +AL     M+   + P++ +F +++  LCK  +L AA   
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLC 305
           F  M++    PN   Y  LIDG  K G + +A+ +   M E F   P V TYN ++ GLC
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYNSVLDGLC 467

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
           GVG++E A  +++ M  +    +  +Y +LI G C+   +E+A  +   +  KG    V 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMV 391
            ++ L++  CK   +  A G+  +++
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 18/322 (5%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSV 103
           P+V  +++L+  F     ++ A   +R I+V+      P +   N ++ GL +  + D  
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRA---FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV------MKALNLFDEMIDKGIEPTVVIY 157
               ++MV    V DV+TY  +ID  C    V        A  + + M   G  P    Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            ++I GLC   K  +A ++ R M +  VVP+L +++ ++   CK  D++ A + +  M  
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
              +PN V +  L+DGL K GE+  A   F  M +    P +  YN ++DG C  G + E
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEE 474

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ +   M   E  PD  +Y  LI+GLC V  +E A  L Q +  +G    V  YN L++
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534

Query: 338 GYCKEGDMEKALSVCSQMTEKG 359
             CK+  +  A  V +++ E G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 231/451 (51%), Gaps = 7/451 (1%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V D V+Y  ++   C QG  + A      ++     PT V YT L+  LC E +  +A  
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           + R M+  GV P++ TY  L+ G C  ADV++A+E   EM    ++PNVV +  L+ G C
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G        F  M+  G+ P++ +Y  LID  C+ G + +A  +  +M +  + P+V 
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN+LI  +C  G ++ A  L   M ++G+  + VTYN+LI G     +M++A+ +  +M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 356 T--EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
              E  VEPNVVTF+S+I G CK G +  A  +   M       ++V F  LI GL +  
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +K+ + L  EM  + + P  FT S LI+G  K  ++  A +   +   + DG    P  
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM--RRDG--IEPEL 430

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  ++ ALC  G + +A   F +M   N + D   Y+TM+ G  R +        L  
Sbjct: 431 VHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M+  G++PD+V   +++  +  +GDL +A R
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAER 520



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 239/496 (48%), Gaps = 13/496 (2%)

Query: 81  LPAIQ---ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           LP+++   + N +L  L ++G       F   ++        V+Y  L+   C +    +
Sbjct: 72  LPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQ 131

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ L  +M   G+ P VV Y  LI GLC+   + +A  + R M E G+ PN+  Y+ L+ 
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQ 191

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYCK        + + EM    ++P+VV +  L+D LC+ G+++ A      M + G+ P
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  YN LI+  CK G++ EAMSL + M +  ++ D  TYN LI GL GV +++ A GLL
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311

Query: 318 QKMY--KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           ++M   +  +  NVVT+NS+I G CK G M +A  V   M E G   N+VTF+ LI G  
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +   +  AM L  EM    L PD   ++ LI+G  K   +     L  +M    I P + 
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
               L+  L + G +  A NFF E         C  + V Y+ +I   C       A + 
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEMHKN-----CKLDVVAYSTMIHGACRLRDRKSAEEF 486

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M  + L PD+ TY+ ++     +  +     +L  M   G VPD  +   +++GY  
Sbjct: 487 LKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGA 546

Query: 556 NGDLKSAFRCSEFLKE 571
            GD +      E ++E
Sbjct: 547 KGDTEKVL---ELIRE 559



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 230/442 (52%), Gaps = 47/442 (10%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L  ++     P V  + TLI    +   +++A+ + R++    + P +   + LL G  K
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+++ V + +EEM   G+  DVV Y  LID  C +G V KA  + D+M+++G+EP VV 
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +LI+ +C E  + EA S+  +M E GV  +  TYN L+ G   V +++ A+    EM+
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 217 HHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           H    ++PNVVTF  ++ GLCK G +R A      MA+ G   N+  +N LI G  +   
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI--------- 325
           + +AM L  EM    + PD FTY+ILI G C + Q++ AE LL KM ++GI         
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 326 -LA------------------------NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
            LA                        +VV Y+++I G C+  D + A      M ++G+
Sbjct: 436 LLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ VT+S LI+    +G++ AA  +  +M     VPDV VF +LI G    G+ ++ L 
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555

Query: 421 LYKEM------LEAKITPSVFT 436
           L +EM      L++KI  +++T
Sbjct: 556 LIREMTAKDIALDSKIISTIYT 577



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 244/505 (48%), Gaps = 11/505 (2%)

Query: 47  IPKFNPSV-FSTLIIAFSEMGH-IEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDS 102
           +P    +V ++T++ A    G  ++ AL++ R +  E  P   +   L+  L  + +   
Sbjct: 72  LPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQ 131

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                 +M   G+  DVVTYG LI   C   DV KA+ L  EM + GIEP VV+Y+ L+ 
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQ 191

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C   +      +F  M   G+ P++  Y  L+D  C+   V +A +   +M+   L+P
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+ VL++ +CK G ++ A +   +M + GV  +   YN LI G      + EAM L 
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311

Query: 283 SEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
            EM   E  + P+V T+N +I GLC  G++  A  +   M + G   N+VT+N LI G  
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           +   ++KA+ +  +M   G+EP+  T+S LI+G CK   +D A  L ++M    + P++V
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +  L+  L + G M++    + EM        V   S++IHG  +     +A  F    
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHM 490

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D+       P+ V Y+ +I      G +  A ++   M +    PD   + ++++G   
Sbjct: 491 LDEG----LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGA 546

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVI 545
                 V+ L+ +M    I  D+ I
Sbjct: 547 KGDTEKVLELIREMTAKDIALDSKI 571


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 221/396 (55%), Gaps = 9/396 (2%)

Query: 59  IIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++  SE G +E   +VYR   K ++   + + N ++NGL K GK +   +  E+M + G+
Sbjct: 130 LVKESENGDME---FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGV 186

Query: 116 VADVVTYGVLIDCCCGQGDV---MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +V+TY  LID  C  G +    KA  +  EM+ KGI P  V Y ILI G C +  +  
Sbjct: 187 SPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSG 246

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F  M+  G+ PN+ TYN L++G C    V+ A+    +M+  +L+PNVVT  VL++
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK   +  A N F  M K GV PN   Y  LID +CK G + +A +L + M    I P
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TYN LI GLC  G ++ A  L+ +M  + + A+VVTYN LID  CK+G+  KA+ + 
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M EKG+ P+ VT+++L+DG C+ GN+ AA+ + T M  K    +VV    LI G    
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G +++   L  EMLE  + P+  T   +   + + G
Sbjct: 487 GRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/371 (35%), Positives = 214/371 (57%), Gaps = 6/371 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           + N   F+ ++    ++G +  A  V   ++V    P +   N L++G  K G+   +++
Sbjct: 152 ELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYK 211

Query: 106 ---FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                +EMV  G+  + VTY +LID  C   +V  A+ +F EM  +G+ P VV Y ILI+
Sbjct: 212 ADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILIN 271

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC++ K+ EA ++   M    + PN+ T+N L++G+CK   VN A+  +++M    + P
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N +T+  L+D  CK G +  A   +  M   G+FP +  YNCLI G C+ G++  A SL 
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           +EM   ++S DV TYNILI  LC  G+   A  LL +M+++G+  + VTYN+L+DGYC+E
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G++  AL V ++M  KG + NVVT + LI G C  G ++ A GL  EM+ + LVP+   +
Sbjct: 452 GNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511

Query: 403 TALIDGLSKDG 413
             + + + + G
Sbjct: 512 EIIKEEMMEKG 522



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 255/498 (51%), Gaps = 24/498 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKF--NPSVFSTL 58
           I   LA+ K Y   R  +    +  +K  K + V  ++F+A+ S+    F  N  +   L
Sbjct: 38  ILNSLAHTKKYSKIRSFL----DKFVKYEKDYSVS-AIFHAI-SMSGDSFCVNSILADML 91

Query: 59  IIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++AF     I      +++        ++ +CN LL+GL+K+ +   +   Y EM+   +
Sbjct: 92  VLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKI 151

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN---KMVE 172
             +V+++ ++++  C  G + +A ++ ++M   G+ P V+ Y  LI G C      KM +
Sbjct: 152 ELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYK 211

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A+++ + M   G+ PN  TYN L+DG+CK  +V+ A+  + EM    L+PNVVT+ +L++
Sbjct: 212 ADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILIN 271

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC  G++  A      M    + PN+  +N LI+G CK   + EA++L ++MEK  + P
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TY  LI   C  G++E A  L   M   GI   V TYN LI G C++GD++ A S+ 
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  K +  +VVT++ LID  CK G    A+ L  EM  K L P  V +  L+DG  ++
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYC 469
           GN++  L +   M       +V T + LI G    GR+ +A   LN  LE+         
Sbjct: 452 GNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG-------L 504

Query: 470 SPNHVLYAAIIQALCYDG 487
            PN   Y  I + +   G
Sbjct: 505 VPNRTTYEIIKEEMMEKG 522



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 230/426 (53%), Gaps = 7/426 (1%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +++    F    D G + +++    L+ GL  E++  + E ++R M +  +  N+ ++N 
Sbjct: 101 ILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNI 160

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK---VGELRAAGNFFVHMA 251
           +++G CKV  +NRA +   +M    + PNV+T+  L+DG CK   +G++  A      M 
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+ PN   YN LIDG CK  N+  AM +  EM++  + P+V TYNILI GLC  G+++
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L  +M    +  NVVT+N LI+G+CK   + +A+++ + M ++GV+PN +T+++LI
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           D  CK G ++ A  LY  M+ + + P+V  +  LI GL + G++K    L  EM+  K++
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
             V T + LI  L K G    A+    E  +K      +P+HV Y  ++   C +G +  
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG----LNPSHVTYNTLMDGYCREGNLRA 456

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  + + M     + +  T+  +++G     R+ D   LL +M++ G+VP+    +++  
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516

Query: 552 GYQENG 557
              E G
Sbjct: 517 EMMEKG 522



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 226/412 (54%), Gaps = 9/412 (2%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF-YH 213
           ++  +L+       K++     F+   + G   +L + N L+ G  K ++ N  +EF Y 
Sbjct: 86  ILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESE-NGDMEFVYR 144

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM+   ++ NV++F ++++GLCKVG+L  AG+    M  +GV PN+  YN LIDG+CK G
Sbjct: 145 EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMG 204

Query: 274 N---LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
               +++A ++  EM    I P+  TYNILI G C    + GA  +  +M ++G+  NVV
Sbjct: 205 RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN LI+G C +G +++A+++  QM    +EPNVVT + LI+G CK   ++ A+ L+ +M
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + + P+ + +T LID   KDG M++   LY  M++  I P V T + LI GL + G +
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A +   E   K      S + V Y  +I +LC  G+  KA KL  +M    L P + T
Sbjct: 385 KAARSLMNEMVSKK----LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y T++ G  R   +   +++   M + G   + V + V+++G+   G L+ A
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 178/340 (52%), Gaps = 7/340 (2%)

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F     +G   ++   N L+ G  K     +   +  EM K +I  +V ++NI++ GLC 
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG---DMEKALSVCSQMTEKGVEPN 363
           VG+L  A  +++ M   G+  NV+TYN+LIDGYCK G    M KA ++  +M  KG+ PN
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPN 227

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT++ LIDG CK  N+  AM ++ EM  + L P+VV +  LI+GL  DG + E + L  
Sbjct: 228 EVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRD 287

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+ + + P+V T + LI+G  KN  ++ A+N F    D    G   PN + Y  +I A 
Sbjct: 288 QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF---NDMEKQG-VDPNAMTYTTLIDAY 343

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C DG++  A  L++ M    + P+  TY  ++ GL R   +     L+ +M+   +  D 
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           V   +++    + G+ + A +  + + E  +  S    +T
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 3/268 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI      G ++EA+ +  ++   ++ P +   N L+NG  K    +     +
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G+  + +TY  LID  C  G +  A  L++ MID+GI P V  Y  LI GLC +
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A S+   M    +  ++ TYN L+D  CK  +  +A++   EM    L P+ VT+
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LMDG C+ G LRAA      M + G   N+  +N LI G C  G L +A  L +EM +
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEG 315
             + P+  TY I+ + +   G +   EG
Sbjct: 502 RGLVPNRTTYEIIKEEMMEKGFVPDIEG 529


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/408 (35%), Positives = 223/408 (54%), Gaps = 3/408 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +ST+I  +   G +++ L + ++++   + P +   N+++  L K GK D       EM+
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+V D V Y  LID  C  G++  A  LFDEM  + I P  + YT +I GLC   KM+
Sbjct: 73  NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +F  M   GV P+  TY  L+DGYCK  ++ +A   +++M+   L PNVVT+  L 
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK+G++  A      M   G+  NI  YN L++G CK+GN+ +A+ L  EME   + 
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY 252

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  T+  L+   C  G++  A  LL++M   G+   V+T+N L++G+C  G +E    +
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M EKG+ PN  T++SL+   C   N+     +Y  M  + ++PD   +  LI G  K
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             NMKE   L+KEM E     +  + +S+I G FK  +IS A   F E
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 246/462 (53%), Gaps = 13/462 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DVV+Y  +I+  C  G++ K L L  EM  KG++P +  Y  +I  LC   K+ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E + R M   G+VP+   Y  L+DG+CK+ ++  A + + EM    + P+ + +  ++ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G++  A   F  M   GV P+   Y  LIDG+CK+G + +A SL ++M +  ++P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TY  L  GLC +GQ++ A  LL +M  +G+  N+ TYNSL++G CK G++ +A+ +  
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M   G+ P+ +TF++L+D  CK G +  A  L  EM+ + L P V+ F  L++G    G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--- 470
            +++  RL   MLE  I P+  T +SL+    K   I N +      T +   G C+   
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLM----KQYCIRNNMRC----TTEIYKGMCARGV 356

Query: 471 -PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+   Y  +I+  C    + +A  L  +M          +Y ++++G  + K++ +   
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLK 570
           L  +M + G+  DA I  + V      G++++A   C E ++
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 214/394 (54%), Gaps = 10/394 (2%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  P VV Y+ +I+G C   ++ +   + + M+  G+ PNLYTYN+++   CK   V+ 
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     EM++  + P+ V +  L+DG CK+G ++AA   F  M K  + P+   Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+ G + EA  + ++M    + PD  TY  LI G C  G++E A  L  +M + G+  
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVTY +L DG CK G ++ A  +  +M  KG++ N+ T++SL++G CK+GNI  A+ L 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM +  + PD + FT L+D   K G M +   L +EML+  + P+V T + L++G   +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 448 GRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           G + +    L + LEK          PN   Y ++++  C    +   ++++  M +  +
Sbjct: 304 GMLEDGERLLAWMLEKG-------IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            PD+ TY  +++G  +A+ M +   L  +M + G
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 215/424 (50%), Gaps = 5/424 (1%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           V   +  +++    P++++  ++I+   + G +++A  V R++    ++P       L++
Sbjct: 29  VLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLID 88

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  K G   + ++ ++EM    +V D + Y  +I   C  G +M+A  +F++M  +G+EP
Sbjct: 89  GFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEP 148

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V YT LI G C   +M +A S+   M + G+ PN+ TY AL DG CK+  V+ A E  
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           HEM    LQ N+ T+  L++GLCK G +R A      M   G++P+   +  L+D +CK 
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKT 268

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + +A  L  EM    + P V T+N+L+ G C  G LE  E LL  M ++GI+ N  TY
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTY 328

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           NSL+  YC   +M     +   M  +GV P+  T++ LI G CKA N+  A  L+ EM  
Sbjct: 329 NSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K        + ++I G  K   + E   L++EM    +       +  +   +  G +  
Sbjct: 389 KGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMET 448

Query: 453 ALNF 456
           AL  
Sbjct: 449 ALEL 452



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 221/426 (51%), Gaps = 4/426 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + + ++NG    G+   V +  +EM + GL  ++ TY  +I   C  G V  A  +
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EMI++GI P  V+YT LI G C    +  A  +F  M +  +VP+   Y A++ G C+
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  A + +++M    ++P+ VT+  L+DG CK GE+  A +    M + G+ PN+  
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L DG CK G +  A  L  EM    +  ++ TYN L+ GLC  G +  A  L+++M 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+  + +T+ +L+D YCK G+M KA  +  +M ++G++P V+TF+ L++G C +G ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
               L   M+ K ++P+   + +L+       NM+ T  +YK M    + P   T + LI
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  K   +  A  +FL K     G   + +   Y +II+      +I +A +LF +MR 
Sbjct: 368 KGHCKARNMKEA--WFLHKEMAEKGFNLTASS--YNSIIKGFFKKKKISEARELFEEMRR 423

Query: 502 DNLRPD 507
           + +  D
Sbjct: 424 EGMAAD 429



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 180/326 (55%), Gaps = 4/326 (1%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P++  Y+ +I+G+C  G L + + L  EM+   + P+++TYN +I  LC  G+++ A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           E +L++M  +GI+ + V Y +LIDG+CK G+++ A  +  +M ++ + P+ + ++++I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C+ G +  A  ++ +M  + + PD V +T LIDG  K G M++   L+ +M+++ +TP+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T ++L  GL K G++  A     E   K        N   Y +++  LC  G I +A 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKG----LQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KL  +M    + PD  T+TT++    +   M+    LL +M+  G+ P  +   V++ G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 554 QENGDLKSAFRCSEFLKESRIGSSET 579
             +G L+   R   ++ E  I  + T
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTT 326



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 7/175 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEA----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
             P+V  F+ L+  F   G +E+      W+  K  ++P     N+L+     +      
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEK-GIMPNTTTYNSLMKQYCIRNNMRCT 344

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            E Y+ M   G++ D  TY +LI   C   ++ +A  L  EM +KG   T   Y  +I G
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKG 404

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
              + K+ EA  +F  MR  G+  +   YN  +D      ++  ALE   E + +
Sbjct: 405 FFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 241/487 (49%), Gaps = 10/487 (2%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           +V P +   N L++GL K  K D   E   EMV  G+  D VT+  ++D  C  G   +A
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            +L   M ++   P+   Y  LI GLC +  +  A+++       G VP++ TY+ L DG
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   ++ A E   EM  +   PN+VT+  L+DGLCK  +   A      +   G  P+
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  Y  ++DG CK G L +A+ +   M K   +P V TY  L++GLC  G+++ A  + +
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M  +   A+ + Y SL++GYCK    ++A  V   +  +G  P +  +++L+DG CK G
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEG 301

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D    ++ +M  +  VP++  +  ++DGL K G + E     + M  A   P V + +
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +I GLFK  +   A        D+       P+ V Y  ++   C + +   A  +  +
Sbjct: 362 IIIDGLFKASKPKEARQVL----DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI--NQVMVRGYQEN 556
           M    + PDN TY T++ GL +  R+ D   L+ +M++ G V  A    N ++ R  +E 
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE- 476

Query: 557 GDLKSAF 563
           G LK A 
Sbjct: 477 GCLKQAL 483



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 212/412 (51%), Gaps = 8/412 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M ++ + P V  Y ILI GLC  +K  +A  M   M + GV P+  T+N++MDG CK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
             RA      M   N +P+  T+  L+ GLCK   +  A          G  P++  Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L DG CK G + EA  L  EM     +P++ TYN LI GLC   + E A  LL+ +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + +VVTY  ++DG CKEG ++KAL +   M ++G  P+V+T+++L++G C+ G +D A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ EMV K    D + + +L++G  K    KE  ++   +   + TP +   ++L+ G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGY 297

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K GR+    N F +   +     C PN   Y  ++  LC  G++ +A      M S   
Sbjct: 298 CKEGRLDEIPNVFEDMACRG----CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 353

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI-NQVMVRGYQE 555
            PD  +Y  ++ GL +A +  +   +L  MI+ GI PDAV  N +M +  +E
Sbjct: 354 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 405



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 258/561 (45%), Gaps = 85/561 (15%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  +S L     + G I+EA  + +++      P +   N L++GL K  K +  +
Sbjct: 111 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY 170

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E  E +V  G V DVVTY +++D  C +G + KAL + + M+ +G  P+V+ YT L+ GL
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230

Query: 165 CNENKMVEAESMFRSM--RECGV------------------------------VPNLYTY 192
           C   ++ EA  +F+ M  ++C                                 P +  Y
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 290

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           NALMDGYCK   ++     + +M      PN+ T+ ++MDGLCK G++  A  F   M  
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P++  YN +IDG  KA    EA  +  +M +  I PD  TYN L+   C   + + 
Sbjct: 351 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGY--------------------------------- 339
           A G+L+ M K G+  + VTYN+LI G                                  
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 470

Query: 340 ---CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              CKEG +++AL +   MT  GVE N VT++  ID  CK G +D A  L +EM     +
Sbjct: 471 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTL 527

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTVSSLIHGLFKNGRISNA 453
            D V +T +I GL K   +    +L +EM+  K   IT   F +  LI    K  R+  A
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL--LIDAFTKTKRLDEA 585

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           L        +     CSP+ + Y  +I  LC   ++ KA +LF +M    +   + +YT 
Sbjct: 586 LTLLELMVQRG----CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 641

Query: 514 MLRGLLRAKRMLDVMMLLADM 534
           ++ GL    R  + + +L +M
Sbjct: 642 LIYGLCGQGRGKEALQVLEEM 662



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 205/448 (45%), Gaps = 40/448 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           + +L+  + +    +EA  V   I   P I   NAL++G  K+G+ D +   +E+M   G
Sbjct: 258 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
            V ++ TY +++D  C  G V +A    + M   G  P VV Y I+I GL   +K  EA 
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCK--------------------------------V 202
            +   M + G+ P+  TYN LM  +CK                                +
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437

Query: 203 ADVNR---ALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +  NR   A E  HEML +  +     T+  ++D LCK G L+ A     HM   GV  N
Sbjct: 438 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 497

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              YN  ID  CK G L EA SL SEM+      D  +Y  +I GLC   QL+ A  L +
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAR 554

Query: 319 KMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +M   +G+     T+N LID + K   +++AL++   M ++G  P+V+T++ +I   CK 
Sbjct: 555 EMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKL 614

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  L+ EM ++ +V   V +T LI GL   G  KE L++ +EM  +         
Sbjct: 615 DKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKC 674

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTD 465
             L   L   GR   A       T K D
Sbjct: 675 RKLYLALRGQGRGEEAAELLRRMTTKMD 702


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/403 (33%), Positives = 220/403 (54%), Gaps = 4/403 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           + + +++G  K G  D      +E+   G+  +   Y  L+D    Q +      L  EM
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++G+EPTV  YTIL+ GL     + + E+++  M+   V  ++Y Y+A+++ YC+  +V
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA E + E + H ++PN  T+G L++G CK+G++ AA      M   GV  N  V+N +
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+ G + +A+ + + MEK  I  D++TYN L  GLC V ++E A+ LL  M ++G+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V+Y +LI  + KEGDM +A  +   M  KG  P+VVT++ +IDG  K G+I  A  
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K LVPD+  +  L+ G   +G +   LRL++EM      P+V   ++L+ GL 
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           K GR   A   +    D       +P+  LY+ ++ +L  D +
Sbjct: 510 KEGRSEEAFQLY----DDMLAAGLTPDDTLYSVLVGSLHTDSR 548



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 207/398 (52%), Gaps = 4/398 (1%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T +  ++++ G C    + +A  +   +   GV  N   YN+L+D Y +  + +      
Sbjct: 147 TPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM +  ++P V T+ +L+DGL + G++      +  M +  V  +++ Y+ +I+ +C+ 
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRG 266

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN+  A  +  E     + P+  TY  LI G C +GQ+E AE LL  M   G+  N + +
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVF 326

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDGYC+ G +EKAL + + M + G+E ++ T+++L  G C+   ++ A  L   M  
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + P+ V +T LI   +K+G+M E  RL+++M      PSV T + +I G  KNG I  
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  F  E   K       P+   YA ++   C +G++  A +LF +M+    +P+   YT
Sbjct: 447 AERFKKEMEKKG----LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYT 502

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            ++ GL +  R  +   L  DM+  G+ PD  +  V+V
Sbjct: 503 ALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 4/406 (0%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           C      ++  V++D  C  G V  A  L DE+   G+      Y  L+     +     
Sbjct: 142 CPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDA 201

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              + + M   GV P + TY  L+DG  +  D+++    Y EM   N+  +V  +  +++
Sbjct: 202 VAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVIN 261

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
             C+ G +R A   F      GV PN   Y  LI+G CK G +  A  L ++M+   +  
Sbjct: 262 AYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGH 321

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +   +N +I G C  G +E A  +   M K GI  ++ TYN+L  G C+   ME A  + 
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             M EKGV PN V++++LI    K G++  A  L+ +M  K   P VV +  +IDG  K+
Sbjct: 382 HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G+++E  R  KEM +  + P ++T + L+HG   NG++  AL  F E   +       PN
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRG----TKPN 497

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            V Y A++  L  +G+  +A +L+ DM +  L PD+  Y+ ++  L
Sbjct: 498 VVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 193/374 (51%), Gaps = 7/374 (1%)

Query: 46  EIPK----FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKG 98
           E+P+     N   +++L+ +++   + +    + +++E   V P +     L++GL + G
Sbjct: 173 ELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAG 232

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
               V   Y+EM    +  DV  Y  +I+  C  G+V +A  +FDE +  G+EP    Y 
Sbjct: 233 DISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYG 292

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LI+G C   ++  AE +   M+  GV  N   +N ++DGYC+   V +ALE    M   
Sbjct: 293 ALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKM 352

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            ++ ++ T+  L  GLC+V  +  A      MA+ GV PN   Y  LI  H K G++ EA
Sbjct: 353 GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEA 412

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             L  +ME     P V TYN++I G    G +  AE   ++M K+G++ ++ TY  L+ G
Sbjct: 413 RRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHG 472

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C  G ++ AL +  +M  +G +PNVV +++L+ G  K G  + A  LY +M+   L PD
Sbjct: 473 HCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPD 532

Query: 399 VVVFTALIDGLSKD 412
             +++ L+  L  D
Sbjct: 533 DTLYSVLVGSLHTD 546



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 176/349 (50%), Gaps = 10/349 (2%)

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           ++  V++DG CK G +  A      + + GV  N   YN L+D + +  N      L  E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME   + P V TY IL+ GL   G +   E +  +M ++ +  +V  Y+++I+ YC+ G+
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A  V  +    GVEPN  T+ +LI+G CK G I+AA  L  +M ++ +  + +VF  
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKT 461
           +IDG  + G +++ L +   M +  I   ++T ++L  GL +  R+ +A   L+   EK 
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                   +PN+V Y  +I     +G +++A +LF DM     RP   TY  M+ G ++ 
Sbjct: 389 -------VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
             + +      +M K G+VPD      +V G+  NG +  A R  E +K
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMK 490



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 7/235 (2%)

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNS--LIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
            GQL  A  LL K       A+V   ++  ++DG+CK G ++ A  +  ++   GV  N 
Sbjct: 125 AGQLPAAADLLGKAIAS-CPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             ++SL+D   +  N DA  GL  EM  + + P V  +T L+DGLS+ G++ +   +Y E
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDE 243

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    +   V+  S++I+   + G +  A   F    D+  G    PN   Y A+I   C
Sbjct: 244 MKRKNVAGDVYFYSAVINAYCRGGNVRRASEVF----DECVGHGVEPNERTYGALINGFC 299

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
             GQI  A  L +DM+   +  +   + TM+ G  R   +   + + A M KMGI
Sbjct: 300 KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGI 354



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 10/225 (4%)

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA++ C       V P  ++ S ++DG CK+G++D A GL  E+    +  +   + +L+
Sbjct: 137 KAIASCPA----SVTP--LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLL 190

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D  ++  N      L KEM    + P+V T + L+ GL + G IS     + E   K   
Sbjct: 191 DSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVA 250

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G    +   Y+A+I A C  G + +AS++F +     + P+  TY  ++ G  +  ++  
Sbjct: 251 G----DVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEA 306

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             MLLADM   G+  + ++   M+ GY  +G ++ A      +++
Sbjct: 307 AEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEK 351



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            PSV  ++ +I  + + G I EA    +++E   ++P I     L++G    GK D    
Sbjct: 425 RPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALR 484

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   G   +VV Y  L+     +G   +A  L+D+M+  G+ P   +Y++L+  L 
Sbjct: 485 LFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLH 544

Query: 166 NENK 169
            +++
Sbjct: 545 TDSR 548


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 219/390 (56%), Gaps = 10/390 (2%)

Query: 32  HHVCYSVFNALNSLEI----PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPA 83
            H+C S      +LE+    P+ N   ++T+I  F   G ++ AL + R++     + P 
Sbjct: 49  RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 107

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
                 +++G  K G+ D   + ++EM+  G V  + V Y  LI   C QG +  AL   
Sbjct: 108 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 167

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M+++G+  TV  Y +L+H L  + +  EA  +   M   G+ P+++TYN L++G+CK 
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 227

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V +ALE +  M    ++  VVT+  L+  L K G+++     F    + G+ P++ +Y
Sbjct: 228 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 287

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+ H  +GN+  A  +  EMEK  I+PD  TYN L++GLC +G+++ A  L+ +M K
Sbjct: 288 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 347

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  ++VTYN+LI GY  +GD++ AL + ++M  KG  P ++T+++LI G CK G  D 
Sbjct: 348 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 407

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +  EMV   + PD   + +LI+GL+ +
Sbjct: 408 AENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 209/402 (51%), Gaps = 10/402 (2%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
             T+ +++   C  G   +AL L  +M      P  V Y  +I G C+  ++  A  + R
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 179 SMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCK 236
            MRE  G+ PN YTY  ++ G+CKV  V+ A++ + EML    ++P  V +  L+ G C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G+L  A  +   M + GV   +  YN L+      G   EA  L  EM    ++PDVFT
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YNILI G C  G ++ A  + + M + G+ A VVTY SLI    K+G +++   +  +  
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G+ P++V +++LI+    +GNID A  +  EM  K + PD V +  L+ GL   G + 
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  +L  EM +  I P + T ++LI G    G + +AL    E  +K   G+ +P  + Y
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK---GF-NPTLLTY 392

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            A+IQ LC +GQ   A  +  +M  + + PD+ TY +++ GL
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 204/403 (50%), Gaps = 10/403 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +L  L   GK     E   +M       + VTY  +I   C +G V  AL++  EM +
Sbjct: 45  NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 100

Query: 148 KG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADV 205
           +G I P    Y  +I G C   ++ EA  +F  M   G V P    YNAL+ GYC    +
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + AL +   M+   +   V T+ +L+  L   G    A      M   G+ P++F YN L
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I+GHCK GN+ +A+ +   M +  +   V TY  LI  L   GQ++  + L  +  + GI
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             ++V YN+LI+ +   G++++A  +  +M +K + P+ VT+++L+ G C  G +D A  
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 340

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  + + PD+V +  LI G S  G++K+ LR+  EM+     P++ T ++LI GL 
Sbjct: 341 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 400

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           KNG+  +A N   E  +       +P+   Y ++I+ L  + +
Sbjct: 401 KNGQGDDAENMVKEMVENG----ITPDDSTYISLIEGLTTEDE 439



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 203/407 (49%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF +M    +      + I++  LC+  K   A  + R M      PN  TYN ++ 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  AL+   EM     + PN  T+G ++ G CKVG +  A   F  M   G V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P   +YN LI G+C  G L  A+     M +  ++  V TYN+L+  L   G+   A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M  +G+  +V TYN LI+G+CKEG+++KAL +   M+ +GV   VVT++SLI    
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +     L+ E V + + PD+V++ ALI+  S  GN+     +  EM + +I P   
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL   GR+  A     E T +       P+ V Y  +I      G +  A ++
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRG----IQPDLVTYNTLISGYSMKGDVKDALRI 376

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            ++M +    P   TY  +++GL +  +  D   ++ +M++ GI PD
Sbjct: 377 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 202/407 (49%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A ++F  M    +     T+N ++   C      RALE  
Sbjct: 5   SLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 64

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA +    M  + G+ PN + Y  +I G CK
Sbjct: 65  RQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 120

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+ +  EM  K E+ P+   YN LI G C  G+L+ A     +M + G+   V 
Sbjct: 121 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 180

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +G   +A  +  +M  KG+ P+V T++ LI+G CK GN+  A+ ++  M
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + +   VV +T+LI  LSK G ++ET +L+ E +   I P +   ++LI+    +G I
Sbjct: 241 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 300

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A KL  +M    ++PD  T
Sbjct: 301 DRAFEIMGEMEKKR----IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 356

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    +++G  +NG
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 403



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 180/359 (50%), Gaps = 10/359 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +  A+ +  EM E+  I+P+ +TY  +I G C VG+++ A  +  +M  +G +
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
               V YN+LI GYC +G ++ AL    +M E+GV   V T++ L+      G    A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L PDV  +  LI+G  K+GN+K+ L +++ M    +  +V T +SLI+ L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G++      F E   +       P+ VLY A+I +    G I +A ++  +M    + 
Sbjct: 261 KKGQVQETDKLFDEAVRRG----IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD+ TY T++RGL    R+ +   L+ +M K GI PD V    ++ GY   GD+K A R
Sbjct: 317 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 162/308 (52%), Gaps = 10/308 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L ++M +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL +  +M E+G + PN  T+ ++I G CK G +D A+ ++ EM+ K  V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    G +   L     M+E  +  +V T + L+H LF +GR + A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY- 199

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++  G   +P+   Y  +I   C +G + KA ++F +M    +R    TYT+++
Sbjct: 200 ---ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 256

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
             L +  ++ +   L  + ++ GI PD V+   ++  +  +G++  AF     +++ RI 
Sbjct: 257 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316

Query: 576 SSETEGHT 583
             +   +T
Sbjct: 317 PDDVTYNT 324


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 158/513 (30%), Positives = 264/513 (51%), Gaps = 12/513 (2%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K    P+I   + LL+ + K  KFD V    E+M   G+  ++ TY + I+  C +  + 
Sbjct: 68  KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLS 127

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +  +M+  G  P++V    L++G C+ N++ EA ++   M E G  P+  T+  L+
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G  +    + A+     M+    QP++VT+G +++GLCK GE   A N    M K  + 
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ +YN +IDG CK  ++ +A  L ++ME   I PDVFTYN LI  LC  G+   A  L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-KGVEPNVVTFSSLIDGQC 375
           L  M ++ I  ++V +N+LID + KEG + +A  +  +M + K   P+VV +++LI G C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++  M ++ EM  + LV + V +T LI G  +  +      ++K+M+   + P + 
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + L+ GL  NG +  AL  F E   K D      + V Y  +I+ALC  G++     L
Sbjct: 428 TYNILLDGLCNNGNVETALVVF-EYMQKRD---MKLDIVTYTTMIEALCKAGKVEDGWDL 483

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +    ++P+  TYTTM+ G  R     +   L  +M + G +P++     ++R    
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543

Query: 556 NGDLKSAFRCSEFLKESR----IGSSETEGHTT 584
           +GD  ++   +E +KE R     G + T G  T
Sbjct: 544 DGDEAAS---AELIKEMRSCGFAGDASTFGLVT 573



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 238/485 (49%), Gaps = 11/485 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S  I  F     +  AL +  K+  L   P+I   N+LLNG     +        
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  G   D VT+  L+          +A+ L + M+ KG +P +V Y  +I+GLC  
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +   A ++   M +  +  ++  YN ++DG CK   ++ A + +++M    ++P+V T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+  LC  G    A      M +  + P++  +N LID   K G L EA  L  EM K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348

Query: 288 FE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            +   PDV  YN LIKG C   ++E    + ++M + G++ N VTY +LI G+ +  D +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  V  QM   GV P+++T++ L+DG C  GN++ A+ ++  M  + +  D+V +T +I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           + L K G +++   L+  +    + P+V T ++++ G  + G    A   F+E   K DG
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDG 526

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY---TTMLRGLLRAKR 523
               PN   Y  +I+A   DG    +++L  +MRS     D  T+   T ML      K 
Sbjct: 527 PL--PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584

Query: 524 MLDVM 528
            LD++
Sbjct: 585 FLDML 589



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 220/454 (48%), Gaps = 36/454 (7%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF +M+     P++V ++ L+  +   NK     S+   M+  G+  NLYTY+  ++
Sbjct: 59  AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+     P++VT   L++G C    +  A      M + G  P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   +  L+ G  +     EA++L   M      PD+ TY  +I GLC  G+ + A  LL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM K  I A+VV YN++IDG CK   M+ A  + ++M  KG++P+V T++ LI   C  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFT 436
           G    A  L ++M+ K++ PD+V F ALID   K+G + E  +LY EM+++K   P V  
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDK--------------------------------- 463
            ++LI G  K  R+   +  F E + +                                 
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           +DG +  P+ + Y  ++  LC +G +  A  +F  M+  +++ D  TYTTM+  L +A +
Sbjct: 419 SDGVH--PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + D   L   +   G+ P+ V    M+ G+   G
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 245/501 (48%), Gaps = 9/501 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWEFYEE 109
           +ST++ +  + G  + AL + R          CN      +++GL K+GK     + + E
Sbjct: 177 YSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHE 236

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G+  +VVTY  +I   C    V KA  +  +M+  G++P  V Y  LIHG     +
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             +A  MF+ M   GV+PN  T +  +   CK   +  A EF+  ML    + N++++  
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G    G L    N F  M + G+ PN  V+N L++G+ K G + EAM +  +M+K  
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++PDV TY  +I   C +G ++ A      M  +G+  N   Y  LI G+C  GD+ KA 
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  ++  KG+ P +++F+SLI+  CK G +  A  ++  ++      DV +FT+LIDG 
Sbjct: 477 ELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY 536

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G M E  R++  M+   I P + T  +L++G  KNGRI + L  F E   K      
Sbjct: 537 CLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG----V 592

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P    Y  I+  L + G+   A ++F +M    +     TY+ +L GL R     + + 
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652

Query: 530 LLADMIKMGIVPDAVINQVMV 550
           +   +  M +  D VI  +M+
Sbjct: 653 VFQKLCAMNVKFDIVILNIMI 673



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 271/549 (49%), Gaps = 17/549 (3%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI-- 78
           V   L K  K    C  +F+ +    +P  N   ++++I A  +   +++A  + R++  
Sbjct: 217 VVHGLFKEGKVGEAC-DLFHEMTQQGVPP-NVVTYNSVIHALCKARAVDKAQGILRQMVG 274

Query: 79  -EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
             V P     N L++G    G++      ++EM   G++ + VT    +   C  G + +
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A   FD M+ KG +  ++ Y+ L+HG      +V+  ++F  M   G+VPN + +N L++
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GY K   V  A+  + +M    L P+V+T+  ++   C++G +  A + F HM   GV P
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N  VY CLI G C  G+L +A  L  E+    + P + ++  LI  LC  G++  A+ + 
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             + + G  A+V  + SLIDGYC  G M +A  V   M   G+EP++VT+ +L++G CK 
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G ID  + L+ E++ K + P    +  ++DGL   G       +++EM+E+ I  ++ T 
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH----VLYAAIIQALCYDGQILKAS 493
           S L+ GL +N     A+  F +         C+ N     V+   +I  +    +  +A 
Sbjct: 635 SILLTGLCRNNCTEEAITVFQK--------LCAMNVKFDIVILNIMISKMFKARRREEAE 686

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF+ +    L P   TYT M+  L++   + +   + + M+K G+ P +    V+VR  
Sbjct: 687 GLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTL 746

Query: 554 QENGDLKSA 562
            E G++  A
Sbjct: 747 LEKGEIVKA 755



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 229/449 (51%), Gaps = 7/449 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA-ESMF 177
           V TY +LIDCCC    +  A   F  ++ +G++  V++ + L+ GLC+  +  EA + +F
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLF 162

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLC 235
             M E G VP+  +Y+ ++   C       AL+     +        NVV +  ++ GL 
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLF 222

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G++  A + F  M + GV PN+  YN +I   CKA  + +A  +  +M    + PD  
Sbjct: 223 KEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV 282

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN LI G   +GQ + A  + ++M   G++ N VT ++ +   CK G +E+A      M
Sbjct: 283 TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             KG + N++++S+L+ G   AG +     L+  MV   +VP+  VF  L++G +K G +
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMV 402

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +E + ++++M +  + P V T  ++IH   + G + +A++ F    DK       PN  +
Sbjct: 403 REAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG----VEPNFAV 458

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +IQ  C  G ++KA +L  ++R+  L P   ++ +++  L +  R+ +   +   +I
Sbjct: 459 YQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + G   D  I   ++ GY   G +  AFR
Sbjct: 519 RTGEKADVNIFTSLIDGYCLIGKMSEAFR 547



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 240/494 (48%), Gaps = 13/494 (2%)

Query: 88  NALLNGLIKKGKFDSVWE-FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           ++LL GL    + D   +  +  M   G V D ++Y  ++   C  G    AL++    +
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 147 DKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
            +G      VV+Y+ ++HGL  E K+ EA  +F  M + GV PN+ TYN+++   CK   
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V++A     +M+ + +QP+ VT+  L+ G   +G+ + A   F  M   GV PN    + 
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            +   CK G + EA      M       ++ +Y+ L+ G    G L     L   M ++G
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I+ N   +N L++GY K G + +A+ +   M ++G+ P+V+T+ ++I   C+ G++D AM
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
             +  M+ K + P+  V+  LI G    G++ +   L  E+    + P + + +SLI+ L
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHL 501

Query: 445 FKNGRISNALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            K GR+  A   F   +   +K D         ++ ++I   C  G++ +A ++   M S
Sbjct: 502 CKEGRVFEAQRIFDMIIRTGEKADVN-------IFTSLIDGYCLIGKMSEAFRVHDAMVS 554

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + PD  TY T++ G  +  R+ D ++L  +++  G+ P      +++ G    G   +
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAA 614

Query: 562 AFRCSEFLKESRIG 575
           A    + + ES I 
Sbjct: 615 AKEMFQEMIESGIA 628



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 34/375 (9%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS- 280
           P V T+ +L+D  C+   L  A  FF  + + G+  ++ V + L+ G C A    EA+  
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG--ILANVVTYNSLIDG 338
           L   M +    PD  +Y+ ++K +C  G+ + A  +L+   K+G     NVV Y++++ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             KEG + +A  +  +MT++GV PNVVT++S+I   CKA  +D A G+  +MV   + PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF- 457
            V +  LI G S  G  K+ +R++KEM    + P+  T S+ +  L K+GRI  A  FF 
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 458 --LEKTDKTD--------GGYCS--------------------PNHVLYAAIIQALCYDG 487
             L K  K +         GY +                    PN  ++  ++      G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + +A  +F DM+   L PD  TY  ++    R   M D M     MI  G+ P+  + Q
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 548 VMVRGYQENGDLKSA 562
            +++G+  +GDL  A
Sbjct: 461 CLIQGFCTHGDLVKA 475



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 3/300 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN---ALLNGLIKKGKFDSVWEFYEEMV 111
           F++LI    + G + EA  ++  I         N   +L++G    GK    +  ++ MV
Sbjct: 494 FASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMV 553

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D+VTYG L++ CC  G +   L LF E++ KG++PT   Y I++ GL +  +  
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A+ MF+ M E G+   + TY+ L+ G C+      A+  + ++   N++ ++V   +++
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             + K      A   F  +  +G+ P +  Y  +++   K G++ EA  + S M K  +S
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P     N++++ L   G++  A   + ++  + IL    T + L+  +  +G   + L++
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR- 420
           P V T+S LID  C+A  +D A   +  ++ + +  DV+V ++L+ GL       E +  
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L+  M E    P   + S+++  +  +GR   AL+    +     GG C  N V+Y+ ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL--RMAVKQGGGCPCNVVVYSTVV 218

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             L  +G++ +A  LF +M    + P+  TY +++  L +A+ +     +L  M+  G+ 
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278

Query: 541 PDAVINQVMVRGYQENGDLKSAFR 564
           PD V    ++ GY   G  K A R
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVR 302


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 263/513 (51%), Gaps = 8/513 (1%)

Query: 58  LIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           LI    + G   EAL VYR++    + P+++  +AL+  L K+   ++V    +EM   G
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           L  ++ T+ + I      G + +A  +   M D G  P VV YT+LI  LCN  K+  A+
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +F  M+     P+  TY  L+D +    D++   EF+ EM      P+VVTF +L+D L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CKVG++  A      M K GV PN+  YN LI G  +   L EA+ L + ME   +    
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           +TY + I      G+   A    +KM   GI+ N+V  N+ +    ++G +E+A    + 
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + + G+ P+ +T++ L+    KAG +D A+ L +EM      P+VV+  +LID L K   
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E  ++++ M E K+ P+V T ++L+ GL K GR+  A   F  K    D   C PN +
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF--KGMIADD--CPPNTI 613

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            +  ++  LC +G++  A K+   M   N  PD  TY T++ GL++  R+     L   M
Sbjct: 614 SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            K+ I PD V    ++ G  ++G ++ AFR ++
Sbjct: 674 KKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAK 705



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 162/575 (28%), Positives = 263/575 (45%), Gaps = 46/575 (8%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +FN++ SL + +     +   I  + + G   +A+  + K++   ++P I ACNA L  L
Sbjct: 424 LFNSMESLGL-ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            ++G+ +   EF+  +  CGL  D +TY +L+ C    G V  A+ L  EM + G +P V
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEV 542

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           VI   LI  L   +++ EA  MF+ M+E  + P + TYN L+ G  K   V  A   +  
Sbjct: 543 VIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKG 602

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+  +  PN ++F  L+D LCK GE+  A      M +   FP++  YN +I G  K   
Sbjct: 603 MIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENR 662

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA--------------------- 313
           +  A  L  +M+K  I PD  T   L+ G+   G++E A                     
Sbjct: 663 VNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWE 721

Query: 314 ---EGLLQK-------MYKEGILANVVTYNS-----LIDGYCKEGDMEKALSVCSQMTEK 358
               G+L +       ++ E ++ N +  +      L+   CK G    A +V  ++T+ 
Sbjct: 722 DLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKS 781

Query: 359 -GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             + P++  ++SLIDG  KA   + A GL+ +M      PDV  +   +D L K G +KE
Sbjct: 782 FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              LY+EML     P+  T + +I GL K+  +  A++ +    D   G + SP    Y 
Sbjct: 842 LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYY---DLMSGDF-SPTPWTYG 897

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I  L   G++ +A + F +M      P+   Y  ++ G  +   +     L   M+K 
Sbjct: 898 PLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKE 957

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           GI PD     +MV      G +  A    E LK S
Sbjct: 958 GIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 258/576 (44%), Gaps = 29/576 (5%)

Query: 17  LIKDVTENLLKSRKPHHVCYS--VFNALNSLEIPKFNPSVFSTL-----IIAFSEM-GHI 68
           +I+   + ++  RKP     S  V+  L S+  P    S F+++     +I  +E   ++
Sbjct: 69  VIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYV 128

Query: 69  EEALWVYRKIE-------------VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
            E L  +R++E             +  +I     +   L  +G         E+M   G 
Sbjct: 129 LEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGF 188

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V +  +Y  LI      G   +AL ++  M+ +GI+P++  Y+ L+  L     +     
Sbjct: 189 VLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMG 248

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           + + M   G+ PN+YT+   +    +   ++ A      M      P+VVT+ VL+D LC
Sbjct: 249 LLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALC 308

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G+L  A   F+ M      P+   Y  L+D     G+L       SEME     PDV 
Sbjct: 309 NAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVV 368

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           T+ ILI  LC VG+++ A G L  M K+G+  N+ TYN+LI G  +   +++AL + + M
Sbjct: 369 TFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM 428

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G+E    T+   ID   K+G    A+  + +M    +VP++V   A +  L++ G +
Sbjct: 429 ESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRL 488

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +E    +  + +  + P   T + L+    K GR+ +A+    E  +      C P  V+
Sbjct: 489 EEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG----CDPEVVI 544

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
             ++I  L    ++ +A K+F  M+   L P   TY T+L GL +  R+ +   L   MI
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 536 KMGIVPDAVINQVMVRGYQENGD----LKSAFRCSE 567
                P+ +    ++    +NG+    LK  FR +E
Sbjct: 605 ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTE 640



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 188/359 (52%), Gaps = 4/359 (1%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
            + SV   L+    + G   +A  V+ K+     + P+++A N+L++GL+K    +  W  
Sbjct: 751  DDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGL 810

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + +M   G   DV TY + +D     G + +  +L++EM+ +G +P  + + I+I GL  
Sbjct: 811  FYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             N + +A  ++  +      P  +TY  L+DG  K+  +  A +F+ EML +   PN   
Sbjct: 871  SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            + +LM+G  K G++  A   F  M K G+ P++  Y+ ++D  C  G + +A+    E++
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               + PD+  YN++I GL    ++E A  L  +M   GI  ++ TYN+LI      G +E
Sbjct: 991  LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050

Query: 347  KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A  +  ++  KG+EPNV T+++LI G   +GN D A  +Y +M++    P+   F  L
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 231/465 (49%), Gaps = 8/465 (1%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
             ++T+I    +   +  A W++ +++  + P       LL G+IK G+ +  +   +E V
Sbjct: 649  TYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFV 708

Query: 112  L-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G  AD   +  L+     + ++ +++   + ++   I     +   L+  LC   K 
Sbjct: 709  HHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKA 768

Query: 171  VEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
            V+A ++F  + +   + P+L  YN+L+DG  K      A   +++M +    P+V T+ +
Sbjct: 769  VDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNL 828

Query: 230  LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
             +D L K G+++   + +  M   G  PN   +N +I G  K+ +L +A+ L  ++   +
Sbjct: 829  FLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD 888

Query: 290  ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             SP  +TY  LI GL  +G+LE A+   ++M   G + N   YN L++G+ K+GD+E A 
Sbjct: 889  FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948

Query: 350  SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
             +  +M ++G+ P++ ++S ++D  C  G +D A+  + E+ +  L PD+V +  +I+GL
Sbjct: 949  ELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008

Query: 410  SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
             +   ++E L L+ EM    ITP ++T ++LI  L   G +  A   + E   K      
Sbjct: 1009 GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG----L 1064

Query: 470  SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             PN   Y A+I+     G   +A  ++  M     RP+  T+  +
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 255/550 (46%), Gaps = 45/550 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + ++LI    +   ++EA  ++++++   + P +   N LL GL K+G+       ++ M
Sbjct: 544  IINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGM 603

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +      + +++  L+DC C  G+V  AL +   M +    P V+ Y  +I+GL  EN++
Sbjct: 604  IADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRV 663

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF--- 227
              A  +F  M++  + P+  T   L+ G  K   +  A     E +HH       +F   
Sbjct: 664  NYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWED 722

Query: 228  ---GVLMDG------------------------------LCKVGELRAAGNFFVHMAK-F 253
               G+L++                               LCK G+   A N F+ + K F
Sbjct: 723  LMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSF 782

Query: 254  GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
             + P++  YN LIDG  KA     A  L  +M+    +PDVFTYN+ +  L   G+++  
Sbjct: 783  CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKEL 842

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L ++M   G   N +T+N +I G  K   ++KA+ +   +      P   T+  LIDG
Sbjct: 843  FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              K G ++ A   + EM+    +P+  ++  L++G  K G+++    L++ M++  I P 
Sbjct: 903  LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + + S ++  L   G++ +AL++F E   K  G    P+ V Y  +I  L    ++ +A 
Sbjct: 963  LKSYSIMVDCLCMVGKVDDALHYFEEL--KLSG--LDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             LF +MR+  + PD  TY  ++  L  A  + +   +  ++   G+ P+      ++RG+
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078

Query: 554  QENGDLKSAF 563
              +G+   A+
Sbjct: 1079 SMSGNPDRAY 1088



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 214/456 (46%), Gaps = 7/456 (1%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D++   NL  + I   I+ ++  Y  +   L     + EA      MR+ G V N Y+Y 
Sbjct: 140 DMVVVFNLMQKQI---IKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYI 196

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L+    K      AL+ Y  M+   ++P++ T+  LM  L K  ++         M   
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ PNI+ +   I    +AG + EA  +   M+     PDV TY +LI  LC  G+L  A
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + L  KM       + VTY +L+D +   GD++      S+M   G  P+VVTF+ LID 
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +D A G    M  + + P++  +  LI GL +   + E L L+  M    +  +
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            +T    I    K+G    A+  F EK  KT+G    PN V   A + +L   G++ +A 
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTF-EKM-KTNG--IVPNIVACNASLYSLAEQGRLEEAK 492

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           + F+ ++   L PD  TY  ++R   +A R+ D + LL++M + G  P+ VI   ++   
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552

Query: 554 QENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
            +   +  A++  + +KE ++  +    +T  + LG
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 234/473 (49%), Gaps = 8/473 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TL+  F E G IE AL +  ++  +   P     N L+NG  K G+      + 
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYI 289

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++ +  G   D VT+   ++  C  G V  AL +   M+ +G EP V  Y+ +I+ LCN 
Sbjct: 290 QQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNN 349

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA+ +   M + G +P+  T+N L+   C    +  AL+   E+    L PNV TF
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++ LCKVG+   A   F  M   G  P+   YN LID  C +G L +A+ L  EME 
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                   TYN +I GLC   ++E AE +  +M   GI  N +T+N+LIDG C    ++ 
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDD 529

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM  +G++PN VT++S++   CK GNI  A  +   M       DVV +  LI+
Sbjct: 530 AAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLIN 589

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K    +  L+L + M    + P+    + +I  LF+     +AL+ F E T+   GG
Sbjct: 590 GLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV--GG 647

Query: 468 YCSPNHVLYAAIIQALCYDGQILK-ASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              P+   Y  + + LC  G  +K A     +M  +   P+  ++  +  GLL
Sbjct: 648 --PPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLL 698



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 247/484 (51%), Gaps = 10/484 (2%)

Query: 58  LIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           LI  + ++G + +AL ++ ++I     P     +  +NGL + G  D   +    M+  G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              DV TY  +I+C C  G++ +A  + ++M+D G  P    +  LI  LC EN++ EA 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            + R +   G+ PN+YT+N L++  CKV D + A+  + EM      P+ VT+ +L+D L
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C  G+L  A +    M   G   +   YN +IDG CK   + EA  +  +M+   I  + 
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N LI GLC   +++ A  L+ +M  EG+  N VTYNS++  YCK+G++ KA  +   
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MT  G E +VVT+++LI+G CKA    AA+ L   M +K + P    +  +I  L +  N
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++ L L++EM E    P  FT   +  GL +  G I  A +F +E  D       S   
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFR 691

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           +L   ++  L  D  +++A +L   +   N R  +    + +RG LR ++  D +     
Sbjct: 692 MLAEGLLN-LGMDDYLIRAIELI--VEKANFRESD---ISAIRGYLRIRKYYDAIATFGR 745

Query: 534 MIKM 537
           ++++
Sbjct: 746 LLEV 749



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 239/505 (47%), Gaps = 45/505 (8%)

Query: 100 FDSVWEFYE-EMVLCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIY 157
           FD  ++    ++ + G+ A+   Y  L+     +G  +K L + + EM  +GIEP VV +
Sbjct: 141 FDDAFDLVSNQLDMFGVQANTEVYNHLL-TVLAEGSKIKLLESAYTEMSSQGIEPDVVTF 199

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
             +I  LC   +   A  M   M  C V P+  T+  LM+G+ +   +  AL     M  
Sbjct: 200 NTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSE 259

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               P  VT  VL++G CK+G +  A  +       G  P+   ++  ++G C+ G++  
Sbjct: 260 MGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDH 319

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ +   M +    PDV+TY+ +I  LC  G+LE A+G++ +M   G L +  T+N+LI 
Sbjct: 320 ALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIV 379

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             C E  +E+AL +  ++T KG+ PNV TF+ LI+  CK G+   A+ L+ EM      P
Sbjct: 380 ALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D V +  LID L   G + + L L KEM  +    S  T +++I GL K  RI  A   F
Sbjct: 440 DEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVF 499

Query: 458 LEKTDKTD------------GGYCS--------------------PNHVLYAAIIQALCY 485
            ++ D T              G C+                    PN+V Y +I+   C 
Sbjct: 500 -DQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCK 558

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP---- 541
            G I KA+ +   M ++    D  TY T++ GL +A+R    + LL  M   G+ P    
Sbjct: 559 QGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKA 618

Query: 542 -DAVINQVMVRGYQENG-DLKSAFR 564
            + VI Q + RG   NG D  S FR
Sbjct: 619 YNPVI-QSLFRG--NNGRDALSLFR 640



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 233/496 (46%), Gaps = 14/496 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+T+I A         A+ +  ++   +V P       L+ G +++G  ++       M
Sbjct: 198 TFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G     VT  VLI+  C  G V  AL    + I  G EP  V ++  ++GLC    +
Sbjct: 258 SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV 317

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M + G  P++YTY+ +++  C   ++  A    ++M+     P+  TF  L
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC   +L  A +    +   G+ PN++ +N LI+  CK G+   A+ L  EM+    
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD  TYNILI  LC  G+L  A  LL++M   G   + VTYN++IDG CK   +E+A  
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  QM   G+  N +TF++LIDG C A  ID A  L  +M+ + L P+ V + +++    
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN+ +   + + M        V T ++LI+GL K  R   AL     +  +  G    
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLL--RGMRMKG--MK 613

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA----KRMLD 526
           P    Y  +IQ+L        A  LF +M      PD  TY  + RGL R     K   D
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFD 673

Query: 527 VMMLLADMIKMGIVPD 542
            ++ +AD    G +P+
Sbjct: 674 FLVEMAD---NGFIPE 686



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 197/424 (46%), Gaps = 7/424 (1%)

Query: 132 QGDVMKALNLFDEMI--DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           Q D   AL + +  +  D G+ P+  +Y  +I  L         + +   MR  G    L
Sbjct: 66  QADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGL 125

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
               + +  Y ++   + A +     L    +Q N   +  L+  L +  +++   + + 
Sbjct: 126 GLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYT 185

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M+  G+ P++  +N +ID  C+A     A+ +  EM   +++PD  T+  L++G    G
Sbjct: 186 EMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEG 245

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            +E A  L  +M + G     VT N LI+GYCK G +  AL    Q    G EP+ VTFS
Sbjct: 246 SIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFS 305

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           + ++G C+ G++D A+ +   M+ +   PDV  ++ +I+ L  +G ++E   +  +M+++
Sbjct: 306 TFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
              P   T ++LI  L    ++  AL+   E T K      SPN   +  +I ALC  G 
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG----LSPNVYTFNILINALCKVGD 421

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
              A +LF +M+S    PD  TY  ++  L  + ++   + LL +M   G     V    
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481

Query: 549 MVRG 552
           ++ G
Sbjct: 482 IIDG 485



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 21/340 (6%)

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS-EMEKFEISPDVF 295
           VGE+R  G    H    G+          I  + +     +A  L S +++ F +  +  
Sbjct: 113 VGEMRREG----HEVGLGLV------QSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTE 162

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN L+  L    +++  E    +M  +GI  +VVT+N++ID  C+      A+ +  +M
Sbjct: 163 VYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEM 222

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           +   V P+  TF++L++G  + G+I+AA+ L   M      P  V    LI+G  K G +
Sbjct: 223 SSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRV 282

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN---FFLEKTDKTDGGYCSPN 472
            + L   ++ +     P   T S+ ++GL +NG + +AL      L++        C P+
Sbjct: 283 GDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG-------CEPD 335

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y+ +I  LC +G++ +A  + + M      PD  T+ T++  L    ++ + + L  
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           ++   G+ P+     +++    + GD   A R  E +K S
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSS 435


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 254/502 (50%), Gaps = 8/502 (1%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +  +G   EA   L   ++   +P++ A N +L  L +KGK +      E M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +     ++ +Y +LID  C  G++  AL + D M + G+ P ++   I+I  LC   ++
Sbjct: 404 KM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+F  +      P+  T+ +L+DG  +   VN A   Y +ML     PN V +  L
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K G        +  M   G  P++ + N  +D   KAG + +  +L  E++   +
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGL 582

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PDV +Y+ILI GL   G  +    L  +M ++G+  +   YN +IDG+CK G + KA  
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQ 642

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  KG++P VVT+ S+IDG  K   +D A  L+ E   K++  +VVV+++LIDG  
Sbjct: 643 LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG 702

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +E+++  +TP+ +T + L+  L K   I  AL  F    +      C 
Sbjct: 703 KVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK----CP 758

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V Y+ ++  LC   +  KA   + +M+   L+P+  TYTTM+ GL R   +L+   L
Sbjct: 759 PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDL 818

Query: 531 LADMIKMGIVPDAVINQVMVRG 552
                  G +PD+     M+ G
Sbjct: 819 FERFKSSGGIPDSACYNAMIEG 840



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 249/533 (46%), Gaps = 40/533 (7%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG----------LVADVV-- 120
           WV RK + L + +A NALL  + +    + + +  EEM + G          +VA  V  
Sbjct: 121 WVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKS 180

Query: 121 -----------------------TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
                                   Y  LI       +    L L  +M + G E TV ++
Sbjct: 181 RKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLF 240

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           T LI     E ++  A S+   M+      +L  YN  +D + KV  V+ A +F+HE+  
Sbjct: 241 TTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKS 300

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L P+ VTF  ++  LCK   +  A   F  +      P ++ YN +I G+   G   E
Sbjct: 301 QGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNE 360

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A SL    ++    P V  YN ++  L   G++E A  +L+ M K     N+ +YN LID
Sbjct: 361 AYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILID 419

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             CK G++E AL V   M E G+ PN++T + +ID  CKA  +D A  ++  +  K   P
Sbjct: 420 MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D V F +LIDGL + G + +   LY++ML++  TP+    +SLI   FK GR  +    +
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   +     CSP+ +L    +  +   G+I K   LF ++++  L PD  +Y+ ++ G
Sbjct: 540 KEMMHRG----CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           L++     D   L  +M + G+  D     +++ G+ ++G +  A++  E +K
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 258/549 (46%), Gaps = 14/549 (2%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRK 77
           ++  + +KSRK        F  + ++   KF P  S ++TLI A S     +  L + R+
Sbjct: 172 EMVASFVKSRKLREA----FGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQ 227

Query: 78  IEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           ++ +     +     L+    ++G+ D+     +EM      AD+V Y V IDC    G 
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A   F E+  +G+ P  V +T +I  LC   ++ EA  +F  +     VP +Y YN 
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++ GY  V   N A             P+V+ +  ++  L + G++  A      M K  
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMD 406

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN+  YN LID  CKAG L  A+ +   M++  + P++ T NI+I  LC   +L+ A 
Sbjct: 407 AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +   +  +    + VT+ SLIDG  + G +  A  +  +M + G  PN V ++SLI   
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K G  +    +Y EM+ +   PD+++    +D + K G +++   L++E+    +TP V
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            + S LIHGL K G   +    F E   K  G +       Y  +I   C  G++ KA +
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEM--KEQGLHLDTRA--YNIVIDGFCKSGKVNKAYQ 642

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M++  L+P   TY +++ GL +  R+ +  ML  +     +  + V+   ++ G+ 
Sbjct: 643 LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG 702

Query: 555 ENGDLKSAF 563
           + G +  A+
Sbjct: 703 KVGRIDEAY 711



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 247/522 (47%), Gaps = 8/522 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+++I    +   ++EA+ ++ +++    +P + A N ++ G    GKF+  +   E  
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ 368

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G +  V+ Y  ++ C   +G V +AL + + M      P +  Y ILI  LC   ++
Sbjct: 369 KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGEL 427

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +  SM+E G+ PN+ T N ++D  CK   ++ A   +  + H    P+ VTF  L
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSL 487

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL + G++  A   +  M   G  PN  VY  LI    K G   +   +  EM     
Sbjct: 488 IDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPD+   N  +  +   G++E    L +++  +G+  +V +Y+ LI G  K G  +    
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYK 607

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+G+  +   ++ +IDG CK+G ++ A  L  EM  K L P VV + ++IDGL+
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLA 667

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K   + E   L++E     +  +V   SSLI G  K GRI  A     E   K      +
Sbjct: 668 KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG----LT 723

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   +  ++ AL    +I +A   F +M++    P+  TY+ M+ GL + ++     + 
Sbjct: 724 PNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVF 783

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             +M K G+ P+ +    M+ G    G++  A    E  K S
Sbjct: 784 WQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 205/407 (50%), Gaps = 9/407 (2%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP 82
           + L K+++    C S+F  L+  ++   +   F +LI      G + +A  +Y K+  L 
Sbjct: 454 DRLCKAQRLDEAC-SIFLGLDH-KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKM--LD 509

Query: 83  AIQACNA-----LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           + Q  NA     L+    K G+ +   + Y+EM+  G   D++     +DC    G++ K
Sbjct: 510 SGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEK 569

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
              LF+E+  +G+ P V  Y+ILIHGL       +   +F  M+E G+  +   YN ++D
Sbjct: 570 GRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVID 629

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G+CK   VN+A +   EM    LQP VVT+G ++DGL K+  L  A   F       V  
Sbjct: 630 GFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDL 689

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ VY+ LIDG  K G + EA  +  E+ +  ++P+ +T+N L+  L    +++ A    
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCF 749

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           Q M       N VTY+ +++G CK     KA     +M ++G++PN +T++++I G  + 
Sbjct: 750 QNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARV 809

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           GN+  A  L+        +PD   + A+I+GLS      +   L++E
Sbjct: 810 GNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 220/509 (43%), Gaps = 74/509 (14%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           PSV  ++ ++      G +EEAL +    K++  P + + N L++ L K G+ ++  +  
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQ 434

Query: 108 EEMVLCGLVADVVTYGVLIDCCCG-----------------------------------Q 132
           + M   GL  +++T  ++ID  C                                     
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILI--------------------HGLCNENKMV- 171
           G V  A  L+++M+D G  P  V+YT LI                    H  C+ + M+ 
Sbjct: 495 GKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554

Query: 172 --------------EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
                         +  ++F  ++  G+ P++ +Y+ L+ G  K        + ++EM  
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L  +   + +++DG CK G++  A      M   G+ P +  Y  +IDG  K   L E
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE 674

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L  E +   +  +V  Y+ LI G   VG+++ A  +L+++ ++G+  N  T+N L+D
Sbjct: 675 AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLD 734

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
              K  ++++AL     M      PN VT+S +++G CK    + A   + EM  + L P
Sbjct: 735 ALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKP 794

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + + +T +I GL++ GN+ E   L++    +   P     +++I GL    +  +A   F
Sbjct: 795 NTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
            E   K    Y     VL  A+ +A C +
Sbjct: 855 EETRLKGCRIYSKTCVVLLDALHKADCLE 883



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G IE+   ++ +I+   + P +++ + L++GL+K G     ++ + EM   GL  D   Y
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            ++ID  C  G V KA  L +EM  KG++PTVV Y  +I GL   +++ EA  +F   + 
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 684

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
             V  N+  Y++L+DG+ KV  ++ A     E++   L PN  T+  L+D L K  E+  
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDE 744

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F +M      PN   Y+ +++G CK     +A     EM+K  + P+  TY  +I 
Sbjct: 745 ALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL  VG +  A+ L ++    G + +   YN++I+G         A  +  +   KG   
Sbjct: 805 GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRI 864

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
              T   L+D   KA  ++ A
Sbjct: 865 YSKTCVVLLDALHKADCLEQA 885


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/451 (33%), Positives = 233/451 (51%), Gaps = 4/451 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NAL+NG  K+G+        E M    +  +VV+Y  L++  C      +A  L  +MI 
Sbjct: 14  NALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMIS 73

Query: 148 KG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +G    P +V Y+ L+ G C   K+ E+  + + +   G+ P+   Y  ++   CK A +
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             ALE   EM+     P ++TF  L+ G C+   L  A +    MA  GV  ++  YN L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTL 193

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           +DG CKAG L EA  L   M+    +PDV  Y+  + GLC  G++  A  +L++M     
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
             NVVTYN+++DG CK G ++ AL +  QM +  G   NVV +S+++DG CK G    A 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +   M      PDVV +++L++GL K G ++E +   +EM      P+  T  SL+HGL
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373

Query: 445 FKNGRISNALNFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
              GR++ A     E  +    G +C P+   Y A+I  LC  G+I  A K F  MRS  
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             PD  +Y+T++ GL R+ R L   M+L+++
Sbjct: 434 CDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 227/452 (50%), Gaps = 12/452 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   + VT+  L++    QG       L + M  + I+P VV Y  L+ GLC   +  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 174 ESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E + R M  R     P++ TY+ L+ GYCK   V  + E   E++   L+P+ + +  ++
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LCK   L  A      M + G  P +  +N LI G C+  NL  A SL  +M    + 
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV TYN L+ GLC  G+L+ AE LL++M   G   +VV Y+S + G CK G +  A  V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             QM +   +PNVVT+++++DG CK+G ID A+ +  +M        +VV ++ ++DGL 
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G  +E   + + M  A   P V T SSL++GL K G+I  A+    E   +     C 
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG----CK 360

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC-----TYTTMLRGLLRAKRML 525
           PN V Y +++  LC  G++ +A ++  +M S      +C     TY  ++ GL +A R+ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D +     M   G  PD V    +V G   +G
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 207/449 (46%), Gaps = 46/449 (10%)

Query: 51  NPSVFSTLIIAFSEMGH---IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ L+  FS+ G     E  L      ++ P + + N LL GL K  ++    E  
Sbjct: 9   NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELV 68

Query: 108 EEMVLCG--LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT------- 158
            +M+  G     D+VTY  L+   C  G V ++  L  E+I +G+ P  ++YT       
Sbjct: 69  RDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLC 128

Query: 159 ----------------------------ILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
                                        LI G C E  +  A+S+ + M   GV  ++ 
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVV 188

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN LMDG CK   +  A +    M      P+VV +   + GLCK G++  A      M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQ 309
                 PN+  YN ++DG CK+G +  A+ +  +M   +    +V  Y+ ++ GLC +G+
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  +++ M + G   +VVTY+SL++G CK G +E+A+    +M  +G +PN VT+ S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLV-----PDVVVFTALIDGLSKDGNMKETLRLYKE 424
           L+ G C  G +  A  +  EM           P V  + ALI GL K G + + L+ ++ 
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           M      P   + S+++ GL ++GR   A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 205/387 (52%), Gaps = 5/387 (1%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  PN  T+NAL++G+ K             M   ++QPNVV++  L++GLCK+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 240 LRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
              A      M   G    P++  Y+ L+ G+CKAG + E+  L  E+    + PD   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             ++  LC   +L  A  LL++M + G    ++T+N+LI G C+E ++E A S+  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            GV+ +VVT+++L+DG CKAG +  A  L   M      PDVV +++ + GL K G + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             ++ ++M ++   P+V T ++++ GL K+G+I  AL   +E+   +DG  C  N V Y+
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEM-MEQMASSDG--CGLNVVGYS 297

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++  LC  G+  +A  +   M     RPD  TY++++ GL +A ++ + +  + +M   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFR 564
           G  P+AV    +V G    G L  A R
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAER 384



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 172/320 (53%), Gaps = 11/320 (3%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N L++G  ++   +      ++M   G+ ADVVTY  L+D  C  G + +A  L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + M   G  P VV Y+  ++GLC   K+++A  +   MR+    PN+ TYN ++DG CK
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269

Query: 202 VADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
              ++ ALE   +M   +    NVV +  ++DGLCK+G  + A +    MA+ G  P++ 
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ L++G CKAG + EA+    EM      P+  TY  L+ GLC  G+L  AE ++++M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389

Query: 321 YKEGIL-----ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
              G        +V TYN+LI G CK G ++ AL    +M  +G +P+ V++S++++G  
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449

Query: 376 KAGNIDAAMGLYTEMVIKSL 395
           ++G       L  EM++  +
Sbjct: 450 RSGR-----ALQAEMILSEV 464



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 6/290 (2%)

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++    P+  T+N L+ G    G+    E LL+ M    I  NVV+YN L++G CK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 345 MEKALSVCSQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +A  +   M  +G    P++VT+S+L+ G CKAG ++ +  L  E++ + L PD +++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T ++  L K   + E L L +EM+ A   P++ T ++LI G  +   +  A +       
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL----Q 176

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K        + V Y  ++  LC  G++ +A +L   M++    PD   Y++ + GL ++ 
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           ++LD   +L  M      P+ V    ++ G  ++G + +A    E +  S
Sbjct: 237 KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/552 (28%), Positives = 263/552 (47%), Gaps = 47/552 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKGKFDSV 103
           P VFS   L+    +    +EAL +       R     P + + N +LNG  K+G  D  
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +  Y EM+  G++ DVVTY  +I   C    + KA+ + + M+  G+ P  + Y  ++HG
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C+  +  EA    + MR  GV PN+ TY++LM+  CK      A + +  M    L+P+
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 224 VVTFGVLMDGLCKVGEL-----------------------------------RAAGNFFV 248
           + T+  L+ G    G L                                     A   F 
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M + G+ PN+  Y  +ID  CK+G++ +AM    +M    ++P++  Y  LI GLC   
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           + + AE L+ +M   GI  N + +NS+ID +CKEG + ++  +   M   GV+P+++T++
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LIDG C AG +D A  L   MV   + PD+V +  LI+G  +   M + L L+KEM+ +
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            ++P++ T + ++ GLF   R + A   ++  T        S     Y  I+  LC +  
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS----TYNIILHGLCKNNL 636

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
             +A ++F ++   +L+ +  T+  M+  LL+  RM +   L A     G+VPD     +
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696

Query: 549 MVRGYQENGDLK 560
           M     E G L+
Sbjct: 697 MAENLIEQGSLE 708



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 245/489 (50%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +   V TY +LI CCC  G +         ++ KG     + +T L+ G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--- 219
           LC + +  +A + + R M E G +P++++YN L+ G C       ALE  H M       
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             P+VV++  +++G  K G+   A + +  M   G+ P++  Y+ +I   CKA  + +AM
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + + M K  + PD  TYN ++ G C  GQ + A G L+KM  +G+  NVVTY+SL++  
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG--------------------- 378
           CK G   +A  +   MT++G+EP++ T+ +L+ G    G                     
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 379 --------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
                          +D AM ++++M    L P+VV +  +ID L K G++ + +  +++
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  +TP++   +SLIHGL    +   A    LE  D+   G C  N + + +II + C
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR---GICL-NTIFFNSIIDSHC 492

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++PD  TY T++ G   A +M +   LLA M+ +G+ PD V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 553 TYGTLINGY 561



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 270/555 (48%), Gaps = 25/555 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S++I A  +   +++A+ V     K  V+P     N++L+G    G+        ++M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  +VVTY  L++  C  G   +A  +FD M  +G+EP +  Y  L+ G   +  +
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VE  ++   M   G+ P+ + +N L+  Y K   V++A+  + +M  H L PNVV +G +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK G +  A  +F  M   G+ PNI VY  LI G C      +A  L  EM    I
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +   +N +I   C  G++  +E L   M + G+  +++TYN+LIDG C  G M++A  
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + M   GV+P++VT+ +LI+G C+   +D A+ L+ EMV   + P+++ +  ++ GL 
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------LEKTDK 463
                     LY  + ++     + T + ++HGL KN     AL  F       L+   +
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           T           +  +I AL   G++ +A  LF+   ++ L PD  TY+ M   L+    
Sbjct: 658 T-----------FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGS 706

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           + ++  L   M + G   D+ +   +VR   + GD+  A     F+ + +  S E    +
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG-TYLFMIDEKHFSLEA---S 762

Query: 584 TRSFLGHLKPTVYKE 598
           T SFL    P V+++
Sbjct: 763 TASFLLESSPIVWEQ 777



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 235/487 (48%), Gaps = 7/487 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMK 137
           +P + + N LL GL  + +     E    M      G   DVV+Y  +++    +GD  K
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A + + EM+D+GI P VV Y+ +I  LC    M +A  +  +M + GV+P+  TYN+++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC       A+    +M    ++PNVVT+  LM+ LCK G    A   F  M K G+ P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  Y  L+ G+   G L E  +L   M +  I PD   +NILI       +++ A  + 
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM + G+  NVV Y ++ID  CK G ++ A+    QM ++G+ PN++ ++SLI G C  
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
              D A  L  EM+ + +  + + F ++ID   K+G + E+ +L+  M+   + P + T 
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G    G++  A                 P+ V Y  +I   C   ++  A  LF 
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVG----VKPDIVTYGTLINGYCRVSRMDDALALFK 575

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + P+  TY  +L+GL   +R      L   + K G   +     +++ G  +N 
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635

Query: 558 DLKSAFR 564
               A R
Sbjct: 636 LTDEALR 642


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 250/514 (48%), Gaps = 39/514 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + N +LNG  K+G  D  +  Y EM+  G++ DVVTY  +I   C    + KA+ +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + M+  G+ P  + Y  ++HG C+  +  EA    + MR  GV PN+ TY++LM+  CK
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL--------------------- 240
                 A + +  M    L+P++ T+  L+ G    G L                     
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 241 --------------RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
                           A   F  M + G+ PN+  Y  +ID  CK+G++ +AM    +M 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++P++  Y  LI GLC   + + AE L+ +M   GI  N + +NS+ID +CKEG + 
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           ++  +   M   GV+P+++T+++LIDG C AG +D A  L   MV   + PD+V +  LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +G  +   M + L L+KEM+ + ++P++ T + ++ GLF   R + A   ++  T     
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              S     Y  I+  LC +    +A ++F ++   +L+ +  T+  M+  LL+  RM +
Sbjct: 619 LELST----YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L A     G+VPD     +M     E G L+
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 245/489 (50%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +   V TY +LI CCC  G +         ++ KG     + +T L+ G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--- 219
           LC + +  +A + + R M E G +P++++YN L+ G C       ALE  H M       
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             P+VV++  +++G  K G+   A + +  M   G+ P++  Y+ +I   CKA  + +AM
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + + M K  + PD  TYN ++ G C  GQ + A G L+KM  +G+  NVVTY+SL++  
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG--------------------- 378
           CK G   +A  +   MT++G+EP++ T+ +L+ G    G                     
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 379 --------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
                          +D AM ++++M    L P+VV +  +ID L K G++ + +  +++
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  +TP++   +SLIHGL    +   A    LE  D+   G C  N + + +II + C
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR---GICL-NTIFFNSIIDSHC 492

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++PD  TY T++ G   A +M +   LLA M+ +G+ PD V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 553 TYGTLINGY 561



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 270/555 (48%), Gaps = 25/555 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S++I A  +   +++A+ V     K  V+P     N++L+G    G+        ++M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  +VVTY  L++  C  G   +A  +FD M  +G+EP +  Y  L+ G   +  +
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VE  ++   M   G+ P+ + +N L+  Y K   V++A+  + +M  H L PNVV +G +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK G +  A  +F  M   G+ PNI VY  LI G C      +A  L  EM    I
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +   +N +I   C  G++  +E L   M + G+  +++TYN+LIDG C  G M++A  
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + M   GV+P++VT+ +LI+G C+   +D A+ L+ EMV   + P+++ +  ++ GL 
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------LEKTDK 463
                     LY  + ++     + T + ++HGL KN     AL  F       L+   +
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           T           +  +I AL   G++ +A  LF+   ++ L PD  TY+ M   L+    
Sbjct: 658 T-----------FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGS 706

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           + ++  L   M + G   D+ +   +VR   + GD+  A     F+ + +  S E    +
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA-GTYLFMIDEKHFSLEA---S 762

Query: 584 TRSFLGHLKPTVYKE 598
           T SFL    P V+++
Sbjct: 763 TASFLLESSPIVWEQ 777



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 235/487 (48%), Gaps = 7/487 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMK 137
           +P + + N LL GL  + +     E    M      G   DVV+Y  +++    +GD  K
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A + + EM+D+GI P VV Y+ +I  LC    M +A  +  +M + GV+P+  TYN+++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC       A+    +M    ++PNVVT+  LM+ LCK G    A   F  M K G+ P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +I  Y  L+ G+   G L E  +L   M +  I PD   +NILI       +++ A  + 
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM + G+  NVV Y ++ID  CK G ++ A+    QM ++G+ PN++ ++SLI G C  
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
              D A  L  EM+ + +  + + F ++ID   K+G + E+ +L+  M+   + P + T 
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI G    G++  A                 P+ V Y  +I   C   ++  A  LF 
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVG----VKPDIVTYGTLINGYCRVSRMDDALALFK 575

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S  + P+  TY  +L+GL   +R      L   + K G   +     +++ G  +N 
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635

Query: 558 DLKSAFR 564
               A R
Sbjct: 636 LTDEALR 642


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/442 (33%), Positives = 229/442 (51%), Gaps = 8/442 (1%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           + L   K+   A+ L++ V      SRK  +   SVF ++        +  VFS L+ A+
Sbjct: 111 HFLCTHKMLSEAQSLLQFVV-----SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAY 165

Query: 63  SEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           ++ G+  +A+  +R   K  +     +C  L + L+K       W FYEE++ CG   DV
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
             + VL+   C +  + +A  LF E+  +G+ PTVV +  LI+G C    + +   + R 
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M E  V P+++TY+ L++G CK   ++ A + + EM    L PN VTF  L++G C  G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                  +  M + GV P++  YN LI+G CK G+L EA  L  EM +  + PD FTY +
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G LE A  + ++M KEGI  + V + +LI G+C+EG + +A     +M E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           ++P+  T++ +I G CK G++     L  EM     VP VV +  L++GL K G MK   
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 420 RLYKEMLEAKITPSVFTVSSLI 441
            L   ML   + P   T + L+
Sbjct: 526 MLLDAMLNLGVVPDDITYNILL 547



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 220/414 (53%), Gaps = 5/414 (1%)

Query: 138 ALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           A ++F  +++ +G   + +++++L++   +     +A   FR +R+  +    ++   L 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D   K+   + A  FY E+L     P+V  F VLM  LCK  ++  A   F  + K G+ 
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLR 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P +  +N LI+G+CK+GNL +   L   M +  + PDVFTY++LI GLC  GQL+ A  L
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M   G++ N VT+ +LI+G+C  G  +  + +  QM  KGV+P+V+T+++LI+G CK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G++  A  L  EM  + L PD   +T LIDG  K+G+++  L + KEM++  I      
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G  + G++  A     E  +        P+   Y  +I   C  G +    KL 
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLE----AGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +M+ D   P   TY  +L GL +  +M +  MLL  M+ +G+VPD +   +++
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 219/428 (51%), Gaps = 4/428 (0%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           +KGK  +   F   +   G     + + VL++     G    A+  F  +    ++    
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
               L   L   N    A + +  + +CG  P++  +N LM   CK   +N A   + E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               L+P VV+F  L++G CK G L         M +  VFP++F Y+ LI+G CK G L
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L  EM    + P+  T+  LI G C  G+ +    + Q+M ++G+  +V+TYN+L
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G CK GD+ +A  +  +MT++G++P+  T++ LIDG CK G++++A+ +  EMV + +
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
             D V FTALI G  ++G + E  R  +EMLEA I P   T + +IHG  K G +     
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG-- 489

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           F L K  + DG    P  V Y  ++  LC  GQ+  A+ L   M +  + PD+ TY  +L
Sbjct: 490 FKLLKEMQCDGHV--PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547

Query: 516 RGLLRAKR 523
              L+A +
Sbjct: 548 ERTLQAWK 555



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 210/423 (49%), Gaps = 21/423 (4%)

Query: 157 YTILIHGLCNENKMVEAESM----------------FRSMREC-GVVPNLYTYNALMDGY 199
           Y  + H LC    + EA+S+                F S+ E  G   +   ++ LM+ Y
Sbjct: 106 YCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAY 165

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                 + A++ +  +  HNLQ    + G L D L K+     A  F+  +   G  P++
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N L+   CK   + EA  L  E+ K  + P V ++N LI G C  G L+    L + 
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M +  +  +V TY+ LI+G CKEG ++ A  +  +M ++G+ PN VTF++LI+G C  G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            D  M +Y +M+ K + PDV+ +  LI+GL K G+++E  +L  EM +  + P  FT + 
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI G  K G + +AL    E   +        ++V + A+I   C +GQ+++A +   +M
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEG----IELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               ++PD+ TYT ++ G  +   +     LL +M   G VP  V   V++ G  + G +
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521

Query: 560 KSA 562
           K+A
Sbjct: 522 KNA 524



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 184/365 (50%), Gaps = 18/365 (4%)

Query: 31  PHHVCYSVFNALNSLEIPK-------------FNPSV--FSTLIIAFSEMGHIEEALWVY 75
           P H C  +F+ L  L +               + P V  F+ L+    +   I EA  ++
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248

Query: 76  RKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
            +I    + P + + N L+NG  K G  D  +     M+   +  DV TY VLI+  C +
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G +  A  LF EM D+G+ P  V +T LI+G C   +      +++ M   GV P++ TY
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L++G CKV D+  A +   EM    L+P+  T+ +L+DG CK G+L +A      M K
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVK 428

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+  +   +  LI G C+ G + EA     EM +  I PD  TY ++I G C  G ++ 
Sbjct: 429 EGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT 488

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              LL++M  +G +  VVTYN L++G CK+G M+ A  +   M   GV P+ +T++ L++
Sbjct: 489 GFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548

Query: 373 GQCKA 377
              +A
Sbjct: 549 RTLQA 553



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 161/339 (47%), Gaps = 4/339 (1%)

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G+  A+  F   +   G   +  V++ L++ +  +G   +A+     + K  +     
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +   L   L  +     A    +++   G   +V  +N L+   CKE  + +A  +  ++
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++G+ P VV+F++LI+G CK+GN+D    L   M+   + PDV  ++ LI+GL K+G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +  +L+ EM +  + P+  T ++LI+G    GR    +  + +   K       P+ + 
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG----VKPDVIT 367

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I  LC  G + +A KL  +M    L+PD  TYT ++ G  +   +   + +  +M+
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           K GI  D V    ++ G+   G +  A R    + E+ I
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 260/518 (50%), Gaps = 22/518 (4%)

Query: 15  RC-LIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALW 73
           RC  ++D+    L       + + V   L +  I K +   FS LI A+SE G  E+A+ 
Sbjct: 91  RCRTVQDLIIGKLIKENAFELYWKVLQELKNSAI-KISSEAFSVLIEAYSEAGMDEKAVE 149

Query: 74  VY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
            +   R  +  P + A N +L+ L++K  F      Y +M+ C L  DVVTYG+LI   C
Sbjct: 150 SFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLC 209

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
                  AL LFDEM D+GI P  +IY+I++ GLC   K+ +A+ +F  MR  G   +L 
Sbjct: 210 KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L++G+CK   ++ A      +        V+ +G L++GL +      A  ++  M
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            +  + P++ +Y  +I G  + G + EA++L  EM +  + PD   YN LIKG C +G L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + AE L  ++ K     N  TY+ LI G CK G + KA  +  +M + G  P+VVTF+SL
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 371 IDGQCKAGNIDAAMGLYTEMVI-------------KSLVPDVVVFTALIDGLSKDGNMKE 417
           I+G CKA  ++ A  L+ +M I                V D+     +++ L + G + +
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             +L  +++++ + P + T + LI+G  K G I+ A   F E   K       P+ V Y 
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH----MPDSVTYG 565

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            +I  L   G+   A ++F  M      P++ TY T++
Sbjct: 566 TLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 45/514 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + ++  LIK+  F+  W+  +E+    +      + VLI+     G   KA+  F  M D
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
              +P +  + +++H L  +   + A +++  M +C + P++ TY  L+ G CK      
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL  + EM    + PN + + +++ GLC+  ++  A   F  M   G   ++  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK+G L +A +L   + K      V  Y  LI GL    + E A    QKM +E I  
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V+ Y  +I G  +EG + +AL++  +MTE+G+ P+ + +++LI G C  G +D A  L 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+      P+   ++ LI G+ K+G + +   ++KEM +    PSV T +SLI+GL K 
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 448 GRISNAL------------NFFLEKTDKTDGGY------------CSPNHVL-------- 475
            R+  A             + FL  +  TD  +            C    +L        
Sbjct: 457 NRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 476 ------------YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                       Y  +I   C  G I  A KLF +M+     PD+ TY T++ GL RA R
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576

Query: 524 MLDVMMLLADMIKMGIVPD-AVINQVMVRGYQEN 556
             D + +   M+K G VP+ +    +M    +EN
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 206/423 (48%), Gaps = 17/423 (4%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            +  ++I  L  EN       + + ++   +  +   ++ L++ Y +     +A+E +  
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M   + +P++  F +++  L +      A   +  M K  + P++  Y  LI G CK   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             +A+ L  EM    I P+   Y+I++ GLC   ++  A+ L  KM   G   +++TYN 
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L++G+CK G ++ A ++   +T+ G    V+ +  LI+G  +A   + A   Y +M+ ++
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PDV+++T +I GLS++G + E L L  EM E  + P     ++LI G    G +  A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +  LE   K D   C PN+  Y+ +I  +C +G I KA  +F +M      P   T+ ++
Sbjct: 394 SLRLE-ISKHD---CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 515 LRGLLRAKRMLDVMMLLADM---------IKMGIVPDAVIN----QVMVRGYQENGDLKS 561
           + GL +A R+ +  +L   M         +++    D V +    QVM+    E+G +  
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509

Query: 562 AFR 564
           A++
Sbjct: 510 AYK 512



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 19/280 (6%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL--PA--------------IQACNALLNG 93
           PSV  F++LI    +   +EEA  ++ ++E++  P+              I +   ++  
Sbjct: 441 PSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMER 500

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L + G     ++   ++V  G++ D+ TY +LI+  C  G++  A  LF EM  KG  P 
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPD 560

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  LI GL    +  +A  +F  M + G VP   TY  +M   C+  +++ AL  + 
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           + L            V+ +      EL+ A    + M       ++  Y   + G  +A 
Sbjct: 621 KYLRDFRGWEDEKVRVVAESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAK 679

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
              EA ++ S ++ F+++    +  +LI  LC V  L+ A
Sbjct: 680 RDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMA 719


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 252/486 (51%), Gaps = 23/486 (4%)

Query: 43  NSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKK 97
           + LE+    P++  F+ L+  +  +G +  A  ++ KI  L   P     N L+NG+   
Sbjct: 83  HQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLN 142

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           GK      F++ ++  G   D V+Y  LI+  C  G+   AL +  ++  K +   VV+Y
Sbjct: 143 GKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMY 202

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            I+I+ LC +  + +A  ++  M    + P++ T+N+L+ G+C V  +  A   +HEM+ 
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVL 262

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            N+ P+V TF +L+D LCK G +  A N    M K GV P++  Y+ L+DG+C    + +
Sbjct: 263 KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNK 322

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  + S M +  ++P   +YNI+I GL  +  ++ A  L ++M  +GI  + VTYNSLID
Sbjct: 323 AKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLID 382

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G CK G +  A  +  +M   G+  +++T++SLID  CK  +ID A+ L  ++  + + P
Sbjct: 383 GLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP 442

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            +  +  LIDGL K G +K    +++++L    + + +T + +I+GL K G  + A    
Sbjct: 443 SMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                K +     P+ V Y  II+AL    +  KA KL  +M              ++RG
Sbjct: 503 ----SKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM--------------IIRG 544

Query: 518 LLRAKR 523
           LL  K 
Sbjct: 545 LLLCKH 550



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 247/478 (51%), Gaps = 6/478 (1%)

Query: 77  KIEVLPAIQACNALLNGLIK--KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           ++   P+I   N +L  ++K     + +      ++ L G+   +VT+ +L++C C  G+
Sbjct: 50  RMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGE 109

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A ++F +++  G  PT + +  LI+G+C   K+ EA      +   G   +  +Y  
Sbjct: 110 MTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRT 169

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++G CK+ +   AL+   ++    +  +VV + ++++ LCK   +  A   +  M    
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  +N LI G C  G L EA  L  EM    I+PDV+T++IL+  LC  G +  A+
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L  M K+G++ +VVTY+SL+DGYC   ++ KA  V S M+  GV P+  +++ +I+G 
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K   +D A+ L+ EM  K + PD V + +LIDGL K G +    +L  EM    I   +
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADI 409

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI  L KN  I  A+   L K  K  G    P+   Y  +I  LC  G++  A  
Sbjct: 410 LTYNSLIDVLCKNHHIDKAIA--LVKKIKDQG--IQPSMYTYNILIDGLCKGGRLKNAQD 465

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +F D+       +  TY  M+ GL +     +  +LL+ M   GI+PDAV  + ++R 
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRA 523



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 225/425 (52%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L  ++  KGI PT+V + IL++  C+  +M  A S+F  + + G  P   T+N L++
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C    +  AL F+  ++      + V++  L++GLCK+GE RAA      +    V  
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNT 197

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ +YN +I+  CK   + +A  L SEM    ISPDV T+N LI G C VGQL+ A GL 
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  + I  +V T++ L+D  CK+G++ +A ++ + M ++GV P+VVT+SSL+DG C  
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ++ A  +++ M    + P    +  +I+GL K   + E L L+KEM    I P   T 
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI GL K GRIS A        D+        + + Y ++I  LC +  I KA  L  
Sbjct: 378 NSLIDGLCKLGRISYAWQL----VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVK 433

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            ++   ++P   TY  ++ GL +  R+ +   +  D++  G   +A    +M+ G  + G
Sbjct: 434 KIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493

Query: 558 DLKSA 562
               A
Sbjct: 494 LFNEA 498



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 217/431 (50%), Gaps = 6/431 (1%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGL--CNENKMVEAESMFRSMRECGVVPNLYT 191
           DV   ++ F  M+     P++V +  ++  +   N N    A S+   +   G+ P + T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++ YC + ++  A   + ++L     P  +TF  L++G+C  G+L+ A +F  H+ 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G   +   Y  LI+G CK G    A+ +  ++E   ++ DV  YNI+I  LC    + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L  +M  + I  +VVT+NSLI G+C  G +++A  +  +M  K + P+V TFS L+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           D  CK GNI  A  +   M+ + ++PDVV +++L+DG      + +   ++  M    + 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P   + + +I+GL K   +  AL+ F E   K      +P+ V Y ++I  LC  G+I  
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG----IAPDTVTYNSLIDGLCKLGRISY 392

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +L  +M ++ +  D  TY +++  L +   +   + L+  +   GI P      +++ 
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452

Query: 552 GYQENGDLKSA 562
           G  + G LK+A
Sbjct: 453 GLCKGGRLKNA 463



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 196/405 (48%), Gaps = 6/405 (1%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVAD--VNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           S F  M      P++  +N ++    K  +     A+   H++    + P +VTF +L++
Sbjct: 43  SSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVN 102

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
             C +GE+  A + F  + K G  P    +N LI+G C  G L EA+     +       
Sbjct: 103 CYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHL 162

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  +Y  LI GLC +G+   A  +L+K+  + +  +VV YN +I+  CK+  +  A  + 
Sbjct: 163 DQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLY 222

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S+M  K + P+VVTF+SLI G C  G +  A GL+ EMV+K++ PDV  F+ L+D L KD
Sbjct: 223 SEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKD 282

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           GN+     +   M++  + P V T SSL+ G      ++ A + F   T    G   +P+
Sbjct: 283 GNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF--STMSRLG--VAPH 338

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  +I  L     + +A  LF +M    + PD  TY +++ GL +  R+     L+ 
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVD 398

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           +M   GI  D +    ++    +N  +  A    + +K+  I  S
Sbjct: 399 EMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443


>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
 gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 256/511 (50%), Gaps = 30/511 (5%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+    P    CN LL+ LI  G      +     +  G      ++  +I   C  G+V
Sbjct: 13  RRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNV 72

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYNA 194
             A ++F  M   G  P +V Y  L+ G C+  ++ +A  +   +R C +  P+L  +N 
Sbjct: 73  KFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNI 132

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L +G+ KV   N A  ++  M  + L P++VT+G  +D  CK+G+++     F+ M K G
Sbjct: 133 LFNGFAKVYMKNEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVG 191

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN+ V++ LIDG+CKAG+L  A      M++  + P+ FTY+ LI G    G L  A+
Sbjct: 192 IVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARAD 251

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L +KM    IL N   Y S+IDG+ K+G+++ A+   +QM ++ ++ ++  ++ +I G 
Sbjct: 252 SLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGF 311

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            + G  D +M     +    L+PD ++ TA++D   K GN+KE L  YK +L       V
Sbjct: 312 HRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADV 371

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKT---------------------------DKTDGG 467
            T+S+L+ GL K+G +  A  + +++                            + ++ G
Sbjct: 372 VTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDAEKMIKEMSEAG 431

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +  P+  +Y + I  LC  G +LKA  +   M  +++ PD  TY++++ GL     M++ 
Sbjct: 432 FV-PDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEA 490

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             +  DM+  GI PD V   +++RGY   G+
Sbjct: 491 KQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 220/466 (47%), Gaps = 39/466 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           +PS F+++I  F   G+++ A  ++  +      P I + N+LL+G     +        
Sbjct: 55  HPSSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLV 114

Query: 108 EEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +  C L   D+V + +L +         +A   F  M  K   P++V Y   +   C 
Sbjct: 115 NRVRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMW-KYCLPSIVTYGTFVDMFCK 173

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              M     MF  M + G+VPNL  +++L+DGYCK   ++ A E++  M   +++PN  T
Sbjct: 174 MGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFT 233

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG  K G L  A + F  M    + PN  VY  +IDGH K GN+ +A+   ++M 
Sbjct: 234 YSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMF 293

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             +I  D+  Y ++I G   VG+ + +    + + K G+L + +   +++D + K G+++
Sbjct: 294 DRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIK 353

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQ------------------------------CK 376
           +AL+    +  KG E +VVT S+L+DG                               CK
Sbjct: 354 EALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCK 413

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN+D A  +  EM     VPD  V+T+ I  L K GN+ +   + K M++  + P + T
Sbjct: 414 EGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLT 473

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            SSLI GL + G +  A   F +  +K      +P+ V Y  +I+ 
Sbjct: 474 YSSLIGGLAEKGLMIEAKQVFDDMLNKG----ITPDFVSYDILIRG 515



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 16/437 (3%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA------LWVYRKIEVL 81
           S +    C+ V N +   E+ + +  +F+ L   F+++    EA      +W Y     L
Sbjct: 104 SYQIQKACFLV-NRVRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKY----CL 158

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I      ++   K G        + +M+  G+V ++V +  LID  C  G +  A   
Sbjct: 159 PSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEY 218

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F+ M +  + P    Y+ LI G      +  A+S+F  M    ++PN   Y +++DG+ K
Sbjct: 219 FERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFK 278

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V+ A+++ ++M   +++ ++  + V++ G  +VG    +     ++AK G+ P+  +
Sbjct: 279 KGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRII 338

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
              ++D H KAGN+ EA++    +       DV T + L+ GL   G L+ A    + + 
Sbjct: 339 LTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEAR---RYLV 395

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           KE   AN + Y   ID  CKEG+++ A  +  +M+E G  P+   ++S I   CK GN+ 
Sbjct: 396 KEN--ANEILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLL 453

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +   MV + + PD++ +++LI GL++ G M E  +++ +ML   ITP   +   LI
Sbjct: 454 KAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILI 513

Query: 442 HGLFKNGRISNALNFFL 458
            G    G  +   +F L
Sbjct: 514 RGYHNQGNGAAISDFVL 530



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 187/394 (47%), Gaps = 6/394 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA      +R     P  +T N L+         + + +     L     P+  +F  ++
Sbjct: 4   EALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSII 63

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              C+ G ++ A + F+ M++FG  P+I  YN L+DG+C +  + +A  L + +   E++
Sbjct: 64  SFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELN 123

Query: 292 -PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+  +NIL  G   V     A      M+K   L ++VTY + +D +CK GDM+    
Sbjct: 124 RPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKY-CLPSIVTYGTFVDMFCKMGDMKMGNR 182

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M + G+ PN+V FSSLIDG CKAG++D A   +  M   S+ P+   ++ LIDG S
Sbjct: 183 MFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCS 242

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G +     L+++ML A I P+    +S+I G FK G + +A+ +  +  D+       
Sbjct: 243 KHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRD----IK 298

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            +   Y  II      G+  K+ +    +  + L PD    T ++    +A  + + +  
Sbjct: 299 LDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNA 358

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              ++  G   D V    ++ G  ++G L+ A R
Sbjct: 359 YKILLAKGFEADVVTLSALMDGLSKHGYLQEARR 392



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 41/249 (16%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T N L+      G    +  +      KG  P+  +F+S+I   C++GN+  A  ++  M
Sbjct: 23  TCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISM 82

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT-PSVFTVSSLIHGLFKNGR 449
                 PD+V + +L+DG      +++   L   +   ++  P +   + L +G  K   
Sbjct: 83  SRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFAKVYM 142

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
            + A  +F          YC P+ V Y   +   C  G +   +++F             
Sbjct: 143 KNEAFMYF-----GLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMF------------- 184

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
                                  DM+K+GIVP+ V+   ++ GY + G L  AF   E +
Sbjct: 185 ----------------------LDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERM 222

Query: 570 KESRIGSSE 578
           KE  +  +E
Sbjct: 223 KECSVRPNE 231


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 239/473 (50%), Gaps = 8/473 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWV-YRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TL+  F E G I+ AL V  R +E+   P     N L+NG  K G+ +    + 
Sbjct: 219 DETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYI 278

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++ +  G   D +TY   ++  C  G V  AL + D M+ +G +P V  Y I+++ LC  
Sbjct: 279 QQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKN 338

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA+ +   M E G +P++ T+N L+   C    +  AL+   ++    L P+V TF
Sbjct: 339 GQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTF 398

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++ LCKVG+ + A   F  M   G  P+   YN LID  C  G L +A+ L  EME 
Sbjct: 399 NILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMES 458

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                   TYN +I GLC   ++E AE +  +M  +GI  N +T+N+LIDG CK+  ++ 
Sbjct: 459 AGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDD 518

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + SQM  +G++PN +T++S++   CK G+I  A  +   M       DVV +  LI+
Sbjct: 519 ANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLIN 578

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K G  +  L+L + M    +  +    + +I  LF+     +A+N F E T+  +  
Sbjct: 579 GLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE-- 636

Query: 468 YCSPNHVLYAAIIQALCY-DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              P+   Y  + + LC   G I +A     +M      P+  ++  +  GLL
Sbjct: 637 --PPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 151/454 (33%), Positives = 231/454 (50%), Gaps = 6/454 (1%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           L G+ AD V Y  L++    +G  MK L  ++ EM ++GI+P VV +  L+  LC  +++
Sbjct: 143 LFGIQADTVVYNHLLNVLV-EGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQV 201

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  M   M   GV P+  T+  LM G+ +   +  AL     ML     P  VT  VL
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVL 261

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +  A  +       G  P+   YN  ++G C+ G++  A+ +   M +   
Sbjct: 262 INGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDVFTYNI++  LC  GQLE A+G+L +M + G L ++ T+N+LI   C    +E+AL 
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  Q+T KG+ P+V TF+ LI+  CK G+   A+ L+ EM      PD V +  LID L 
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + + L L KEM  A    S  T +++I GL K  RI  A   F    D+ D    S
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF----DQMDLQGIS 497

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N + +  +I  LC D +I  A++L S M S+ L+P+N TY ++L    +   +     +
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M   G   D V    ++ G  + G  + A +
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALK 591



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 249/520 (47%), Gaps = 18/520 (3%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S    L   +SEMG         R I+  P +   N L+  L +  +  +     EEM  
Sbjct: 164 SKMKLLETVYSEMGE--------RGIK--PDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 213

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  D  T+  L+     +G +  AL +   M++ G  PT V   +LI+G C   ++ +
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED 273

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A    +     G  P+  TYN  ++G C+   V  AL+    M+     P+V T+ ++++
Sbjct: 274 ALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LCK G+L  A      M + G  P+I  +N LI   C    L EA+ L  ++    +SP
Sbjct: 334 CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV+T+NILI  LC VG  + A  L ++M   G   + VTYN+LID  C  G + KAL + 
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M   G   + VT++++IDG CK   I+ A  ++ +M ++ +  + + F  LIDGL KD
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 513

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + +  +L  +M+   + P+  T +S++    K G I  A +        T  G+   +
Sbjct: 514 KRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL---QTMTANGF-EVD 569

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I  LC  G+   A KL   MR   +R     Y  +++ L R     D M L  
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFR 629

Query: 533 DMIKMGIVPDAVINQVMVRGY-QENGDLKSAFRCSEFLKE 571
           +M ++G  PDA   +++ RG  +  G ++ AF   +FL E
Sbjct: 630 EMTEVGEPPDAFTYKIVFRGLCRGGGSIREAF---DFLLE 666



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 31/280 (11%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           GI A+ V YN L++   +   M+   +V S+M E+G++P+VVTF++L+   C+A  +  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + +  EM    + PD   FT L+ G  ++G++K  LR+   MLE   +P+  TV+ LI+G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 444 LFKNGRISNALNFFLEK------TDKTD-----GGYCSPNHV------------------ 474
             K GR+ +AL +  ++       D+        G C   HV                  
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 475 --LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  ++  LC +GQ+ +A  + + M      PD  T+ T++  L    R+ + + L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +   G+ PD     +++    + GD + A R  E +K S
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSS 424


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 257/535 (48%), Gaps = 53/535 (9%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEV--LP-AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           +I  F  M   + A+ +YRK+E+  +P  I + N L+       K       + ++   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 115 LVADVVTYGVLIDCCCGQGDV---------------MKALNLFDEMIDKGIEPTVVIYTI 159
              DVVT+  L+   C +  +               ++A+ LFD+M++ G+ P V+ +  
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+GLC E +++EA ++   M   G+  ++ TY  +++G CK+ D   AL    +M   +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++P+VV +  ++D LCK G    A   F  M + G+ PN+F YNC+IDG C  G   +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L  +M + EI+PDV T+N LI      G+L  AE L  +M    I  + VTYNS+I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK    + A      M +    P+VVTF+++ID  C+A  +D  M L  E+  + LV + 
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL- 458
             +  LI G  +  N+     L++EM+   + P   T + L++G  +N ++  AL  F  
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 459 -----------------------EKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQ 488
                                   K D+    +CS       P+   Y  +I   C    
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           I  A+ LF  M+ +   PDN TY T++RG L+A  +   + L+++M   G   DA
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 172/368 (46%), Gaps = 40/368 (10%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S  N L+ +E     P V  +S +I    + GH  +A +++ ++    + P +   N ++
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G    G++        +M+   +  DV+T+  LI     +G + +A  L DEM+ + I 
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398

Query: 152 PTVVIYTILIHGLCNENKMVEAESMF-------------------------------RSM 180
           P  V Y  +I+G C  N+  +A+ MF                               R +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G+V N  TYN L+ G+C+V ++N A + + EM+ H + P+ +T  +L+ G C+  +L
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 241 RAAGNFF--VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
             A   F  + M+K  +  +   YN +I G CK   + EA  L   +    + PDV TYN
Sbjct: 519 EEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           ++I G CG   +  A  L  KM   G   +  TYN+LI G  K G+++K++ + S+M   
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636

Query: 359 GVEPNVVT 366
           G   +  T
Sbjct: 637 GFSGDAFT 644



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 9/303 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           + NP V  F+ LI A  + G + EA  +  ++    + P     N+++ G  K  +FD  
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              ++ M       DVVT+  +ID  C    V + + L  E+  +G+      Y  LIHG
Sbjct: 421 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C  + +  A+ +F+ M   GV P+  T N L+ G+C+   +  ALE +  +    +  +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V + +++ G+CK  ++  A + F  +   GV P++  YN +I G C    + +A  L  
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+     PD  TYN LI+G    G+++ +  L+ +M   G   +  T     +  C+  
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656

Query: 344 DME 346
           D E
Sbjct: 657 DEE 659



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 1/265 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++++I  F +    ++A  ++  +   P +   N +++   +  + D   +   E+   
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GLVA+  TY  LI   C   ++  A +LF EMI  G+ P  +   IL++G C   K+ EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  ++   +  +   YN ++ G CK + V+ A + +  +  H ++P+V T+ V++ G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C    +  A   F  M   G  P+   YN LI G  KAG + +++ L SEM     S D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQ 318
            FT  +  + +C V   E  E  L+
Sbjct: 642 AFTIKMAEEIICRVSDEEIIENYLR 666


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 274/565 (48%), Gaps = 62/565 (10%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD-- 134
           K    P+I   N LL+ + K  KF+ V    E+M   G+  D+ TY + I+C C +    
Sbjct: 76  KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135

Query: 135 ---------------------------------VMKALNLFDEMIDKGIEPTVVIYTILI 161
                                            +  A+ L D+M++ G +P    +T LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           HGL   NK  EA ++   M + G  P+L TY  +++G CK  D++ AL   ++M    ++
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            NVV F  ++D LCK   +  A + F  M   G+ PN+  YN LI+  C  G   +A  L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            S M + +I+P+V T+N LI      G+L  AE L ++M +  I  + +TYN LI+G+C 
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              +++A  +   M  K   PN+ T+++LI+G CK   ++  + L+ EM  + LV + V 
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LE 459
           +T +I G  + G+      ++K+M+  ++   + T S L+HGL   G++  AL  F  L+
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
           K++         N  +Y  +I+ +C  G++ +A  LF  +   +++PD  TY TM+ GL 
Sbjct: 496 KSEM------ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLC 546

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR----IG 575
             + + +   L   M + G +P++     ++R    + D  ++   +E +KE R    +G
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS---AELIKEMRSSGFVG 603

Query: 576 SSET---------EGHTTRSFLGHL 591
            + T         +G   +SFL  L
Sbjct: 604 DASTISLVTNMLHDGRLDKSFLNML 628



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 249/493 (50%), Gaps = 10/493 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S  I  F     +  AL V  K+  L   P I   ++LLNG     +        ++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D  T+  LI          +A+ L D+M+ +G +P +V Y  +++GLC    +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A ++   M    +  N+  +N ++D  CK   V  A++ + EM    ++PNVVT+  L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC  G    A     +M +  + PN+  +N LID   K G L EA  L  EM +  I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYN+LI G C   +L+ A+ + + M  +  L N+ TYN+LI+G+CK   +E  + 
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M+++G+  N VT++++I G  +AG+ D+A  ++ +MV   +  D++ ++ L+ GL 
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G +   L ++K + ++++  ++F  +++I G+ K G++  A + F   + K       
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK------- 532

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V Y  +I  LC    + +A  LF  M+ D   P++ TY T++R  LR         L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592

Query: 531 LADMIKMGIVPDA 543
           + +M   G V DA
Sbjct: 593 IKEMRSSGFVGDA 605



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 227/448 (50%), Gaps = 13/448 (2%)

Query: 133 GDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
            D++K   A++LF +M+     P++V +  L+  +   NK     S+   M+  G+  +L
Sbjct: 59  SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           YTY+  ++ +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 250 MAKFGVFPNIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           M + G  P+ F +  LI G   H KA    EA++L  +M +    PD+ TY  ++ GLC 
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G ++ A  LL KM    I ANVV +N++ID  CK   +E A+ + ++M  KG+ PNVVT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++SLI+  C  G    A  L + M+ K + P+VV F ALID   K+G + E  +L++EM+
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +  I P   T + LI+G   + R+  A   F     K     C PN   Y  +I   C  
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD----CLPNIQTYNTLINGFCKC 411

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            ++    +LF +M    L  +  TYTT+++G  +A       M+   M+   +  D +  
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +++ G    G L +A    ++L++S +
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEM 499



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 229/474 (48%), Gaps = 4/474 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L N L    K D   + + +MV       +V +  L+            ++L ++M   G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   +  Y+I I+  C  +++  A ++   M + G  P++ T ++L++GYC    ++ A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               +M+    +P+  TF  L+ GL    +   A      M + G  P++  Y  +++G 
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G++  A++L ++ME   I  +V  +N +I  LC    +E A  L  +M  +GI  NV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYNSLI+  C  G    A  + S M EK + PNVVTF++LID   K G +  A  L+ E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+ +S+ PD + +  LI+G      + E  +++K M+     P++ T ++LI+G  K  R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           + + +  F E + +   G    N V Y  IIQ     G    A  +F  M S+ +  D  
Sbjct: 414 VEDGVELFREMSQRGLVG----NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TY+ +L GL    ++   +++   + K  +  +  I   M+ G  + G +  A+
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 212/404 (52%), Gaps = 4/404 (0%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           IL + L +  K+ +A  +F  M +    P++  +N L+    K+      +    +M   
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            +  ++ T+ + ++  C+  +L  A      M K G  P+I   + L++G+C +  + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           ++L  +M +    PD FT+  LI GL    +   A  L+ +M + G   ++VTY ++++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK GD++ AL++ ++M    ++ NVV F+++ID  CK  +++ A+ L+TEM  K + P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV + +LI+ L   G   +  RL   MLE KI P+V T ++LI   FK G++  A     
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   ++      P+ + Y  +I   C   ++ +A ++F  M S +  P+  TY T++ G 
Sbjct: 353 EMIQRS----IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + KR+ D + L  +M + G+V + V    +++G+ + GD  SA
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 200/386 (51%), Gaps = 9/386 (2%)

Query: 39  FNALNSLEIP--KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
            N LN +E    K N  +F+T+I +  +  H+E A+ ++ ++E   + P +   N+L+N 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L   G++         M+   +  +VVT+  LID    +G +++A  L +EMI + I+P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            + Y +LI+G C  N++ EA+ MF+ M     +PN+ TYN L++G+CK   V   +E + 
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM    L  N VT+  ++ G  + G+  +A   F  M    V  +I  Y+ L+ G C  G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L  A+ +   ++K E+  ++F YN +I+G+C  G++  A  L   +    I  +VVTYN
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I G C +  +++A  +  +M E G  PN  T+++LI    +  +  A+  L  EM   
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETL 419
             V D     +L+  +  DG + ++ 
Sbjct: 600 GFVGDASTI-SLVTNMLHDGRLDKSF 624



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 200/404 (49%), Gaps = 7/404 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + T++    + G I+ AL +  K+E   +   +   N +++ L K    +   + + EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  +VVTY  LI+C C  G    A  L   M++K I P VV +  LI     E K+
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VEAE +   M +  + P+  TYN L++G+C    ++ A + +  M+  +  PN+ T+  L
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK   +      F  M++ G+  N   Y  +I G  +AG+   A  +  +M    +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+ TY+IL+ GLC  G+L+ A  + + + K  +  N+  YN++I+G CK G + +A  
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   ++   ++P+VVT++++I G C    +  A  L+ +M     +P+   +  LI    
Sbjct: 525 LFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +D +   +  L KEM  +       T+ SL+  +  +GR+  + 
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 256/482 (53%), Gaps = 4/482 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP     N L + + +  ++D V  F + M L G+  D+ T  ++I+C C +  ++ A +
Sbjct: 96  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 155

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +       G EP  + ++ L++G C E ++ EA ++   M E    P+L T + L++G C
Sbjct: 156 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 215

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V+ AL     M+ +  QP+ VT+G +++ LCK G    A + F  M +  +  ++ 
Sbjct: 216 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 275

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +ID  CK G+  +A+SL +EME   I  DV TY+ LI GLC  G+ +    +L++M
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
               I+ +VVT+++LID + KEG + +A  + ++M  +G+ P+ +T++SLIDG CK   +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  ++  MV K   PD+V ++ LI+   K   + + +RL++E+    + P+  T ++L
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G  ++G+++ A   F E   +       P+ V Y  ++  LC +G++ KA ++F  M+
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRG----VPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              +      Y  ++ G+  A ++ D   L   +   G+ PD V   VM+ G  + G L 
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571

Query: 561 SA 562
            A
Sbjct: 572 EA 573



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 247/486 (50%), Gaps = 11/486 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+ AFS +G      W   K+   P     + L+NG   +G+        + MV      
Sbjct: 150 LLFAFSVLGRA----W---KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 202

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+VT   LI+  C +G V +AL L D M++ G +P  V Y  +++ LC       A  +F
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R M E  +  ++  Y+ ++D  CK    + AL  ++EM    ++ +VVT+  L+ GLC  
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+          M    + P++  ++ LID   K G L EA  L +EM    I+PD  TY
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 382

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G C    L  A  +   M  +G   ++VTY+ LI+ YCK   ++  + +  +++ 
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 442

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+ PN +T+++L+ G C++G ++AA  L+ EMV + + P VV +  L+DGL  +G + +
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 502

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L ++++M ++++T  +   + +IHG+    ++ +A + F   +DK       P+ V Y 
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG----VKPDVVTYN 558

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I  LC  G + +A  LF  M+ D   PD+ TY  ++R  L    ++  + L+ +M   
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618

Query: 538 GIVPDA 543
           G   D+
Sbjct: 619 GFSADS 624



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 244/474 (51%), Gaps = 8/474 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            FSTL+  F   G + EA+  V R +E+   P +   + L+NGL  KG+        + M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D VTYG +++  C  G+   AL+LF +M ++ I+ +VV Y+I+I  LC +   
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S+F  M   G+  ++ TY++L+ G C     +   +   EM+  N+ P+VVTF  L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D   K G+L  A   +  M   G+ P+   YN LIDG CK   L EA  +   M     
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ TY+ILI   C   +++    L +++  +G++ N +TYN+L+ G+C+ G +  A  
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  +GV P+VVT+  L+DG C  G ++ A+ ++ +M    +   + ++  +I G+ 
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
               + +   L+  + +  + P V T + +I GL K G +S A   F  +  K DG  C+
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF--RKMKEDG--CT 586

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           P+   Y  +I+A      ++ + +L  +M+      D+ T   M+  +L  +R+
Sbjct: 587 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST-IKMVIDMLSDRRL 639



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 4/440 (0%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A++LF+ MI     PT + +  L   +    +        + M   G+  ++YT   
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +++ YC+   +  A            +P+ +TF  L++G C  G +  A      M +  
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P++   + LI+G C  G + EA+ L   M ++   PD  TY  ++  LC  G    A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L +KM +  I A+VV Y+ +ID  CK+G  + ALS+ ++M  KG++ +VVT+SSLI G 
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G  D    +  EM+ ++++PDVV F+ALID   K+G + E   LY EM+   I P  
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI G  K   +  A   F    D      C P+ V Y+ +I + C   ++    +
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMF----DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF ++ S  L P+  TY T++ G  ++ ++     L  +M+  G+ P  V   +++ G  
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG+L  A    E +++SR+
Sbjct: 496 DNGELNKALEIFEKMQKSRM 515



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ +A  +F SM +   +P    +N L     +    +  L F   M  + ++ ++ T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++  C+  +L  A +      K G  P+   ++ L++G C  G + EA++L   M + 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +  PD+ T + LI GLC  G++  A  L+ +M + G   + VTY  +++  CK G+   A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +  +M E+ ++ +VV +S +ID  CK G+ D A+ L+ EM +K +  DVV +++LI G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L  DG   +  ++ +EM+   I P V T S+LI    K G++  A   + E   +     
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG---- 374

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ + Y ++I   C +  + +A+++F  M S    PD  TY+ ++    +AKR+ D M
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L  ++   G++P+ +    +V G+ ++G L +A
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 468



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 16/210 (7%)

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDG------QCKAGNIDA----AMGLYTEMVIKS 394
           + +  S  +Q+ EKG   +++ +SS+ +       + + G +D     A+ L+  M+   
Sbjct: 37  LNRKASNFTQILEKGT--SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSR 94

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            +P  + F  L   +++       L   K M    I   ++T++ +I+   +  ++  A 
Sbjct: 95  PLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAF 154

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +  L +  K   GY  P+ + ++ ++   C +G++ +A  L   M     RPD  T +T+
Sbjct: 155 SV-LGRAWKL--GY-EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 210

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           + GL    R+ + ++L+  M++ G  PD V
Sbjct: 211 INGLCLKGRVSEALVLIDRMVEYGFQPDEV 240


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/471 (33%), Positives = 248/471 (52%), Gaps = 7/471 (1%)

Query: 96  KKGKFDSVWE---FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           KK  FD++ +    +  ++    +  VV + +++           A++L  +M  +GI P
Sbjct: 52  KKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITP 111

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++V  +ILI+  C+   M  A S+   + + G   N  T   +M G C   +V +ALEF+
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             ++      + VT+G L++GLCK+G  R A      M    V PN+ +YN ++DG CK 
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKD 231

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA  L S++    I PDVFTY  LI G CG+GQ      LL  M    +  NV TY
Sbjct: 232 GLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N LID  CK+G + KA  + + M E+G  P++VTF++L+ G C   ++  A  L+     
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + PDV  +  LI G  K+  + E L L+ +M   K+ P++ T SSLI GL K+GRIS 
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A   F   +   DGG  SPN + Y  ++ ALC    + KA +LF+ M    L P+  +Y 
Sbjct: 412 AWELF---SAIHDGG-PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYN 467

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++ G  ++KR+ + M L  +M +  +VPD+V    ++ G  ++G +  A+
Sbjct: 468 ILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 249/491 (50%), Gaps = 7/491 (1%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I++A+ ++ ++     LP++   N +L  ++K   + +     ++M L G+   +VT  +
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+C C  G +  A ++   ++ +G +   +  T ++ GLC   ++ +A     S+   G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
            + +  TY  L++G CK+     A E  H+M    ++PNVV + +++DGLCK G +  A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           + +  +   G+ P++F Y CLI G C  G   E   L  +M    ++ +V+TYNILI  L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G L  A  +   M + G   ++VT+N+L+ GYC   D+ +A  +     E G+ P+V
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            +++ LI G CK   ID A+ L+ +M  K L P++V +++LIDGL K G +     L+  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           + +   +P+V T + ++  L K   +  A+  F    ++      +PN   Y  +I   C
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG----LTPNVSSYNILINGYC 474

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              +I +A  LF +M   NL PD+ TY  ++ GL ++ R+     L   M   G   D +
Sbjct: 475 KSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVI 534

Query: 545 INQVMVRGYQE 555
              ++   + +
Sbjct: 535 TYNILFDAFSK 545



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 219/412 (53%), Gaps = 7/412 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEAL----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           PS+   S LI  +  +GH+  A      V ++   L AI     ++ GL   G+     E
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAI-TLTTIMKGLCINGEVRKALE 169

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F++ +V  G + D VTYG LI+  C  G   +A  L  +M  + + P VVIY +++ GLC
Sbjct: 170 FHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLC 229

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  + EA  ++  +   G+ P+++TY  L+ G+C +           +M+  N+  NV 
Sbjct: 230 KDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVY 289

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+D LCK G L  A +    M + G  P++  +N L+ G+C   ++ EA  L    
Sbjct: 290 TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF 349

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  I+PDV++YNILI G C   +++ A  L  KM  + +  N+VTY+SLIDG CK G +
Sbjct: 350 AECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRI 409

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + S + + G  PNV+T++ ++D  CK   +D A+ L+  M  + L P+V  +  L
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           I+G  K   + E + L++EM    + P   T + LI GL K+GRIS+A   F
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 205/430 (47%), Gaps = 4/430 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF  +I     P+VV + +++  +        A S+ + M   G+ P++ T + L++
Sbjct: 62  AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILIN 121

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            YC +  +  A      +L    Q N +T   +M GLC  GE+R A  F   +   G   
Sbjct: 122 CYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLL 181

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   Y  LI+G CK G   EA  L  +ME   + P+V  YN+++ GLC  G +  A  L 
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             +   GI  +V TY  LI G+C  G   +   +   M ++ V  NV T++ LID  CK 
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M+ +   PD+V F  L+ G     ++ E  +L+    E  ITP V++ 
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G  KN RI  AL+ F    +K +    +PN V Y+++I  LC  G+I  A +LFS
Sbjct: 362 NILIIGYCKNNRIDEALSLF----NKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +      P+  TY  ML  L + + +   + L   M + G+ P+     +++ GY ++ 
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477

Query: 558 DLKSAFRCSE 567
            +  A    E
Sbjct: 478 RIDEAMNLFE 487



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 192/347 (55%), Gaps = 5/347 (1%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNG 93
           F  L+ +E     P+V  ++ ++    + G + EA  +Y  +    + P +     L++G
Sbjct: 203 FELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHG 262

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
               G++  V     +MV   +  +V TY +LID  C +G + KA ++ + MI++G  P 
Sbjct: 263 FCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPD 322

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V +  L+ G C  N +VEA  +F +  ECG+ P++++YN L+ GYCK   ++ AL  ++
Sbjct: 323 LVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFN 382

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M +  L PN+VT+  L+DGLCK G +  A   F  +   G  PN+  YN ++D  CK  
Sbjct: 383 KMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQ 442

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + +A+ L + M +  ++P+V +YNILI G C   +++ A  L ++M++  ++ + VTYN
Sbjct: 443 LVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYN 502

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            LIDG CK G +  A  + + M + G   +V+T++ L D   K  ++
Sbjct: 503 CLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 166/551 (30%), Positives = 269/551 (48%), Gaps = 72/551 (13%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALN-SLEIPKFNPSVFSTLI 59
           + ++LAN+K Y   R  +    + L+K+ K  H   SVF++L    + P  N  +   L+
Sbjct: 84  VLHLLANSKKYSKVRSFL----DKLVKNEK--HTVSSVFHSLLLGGDRPCANALITDMLV 137

Query: 60  IAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           +A+     I  A  V+R+++      ++ +CN LL+ L+K  +   +   Y+EM      
Sbjct: 138 LAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEM------ 191

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
                                        I + I+P +  + I I+GLC   K+ +AE +
Sbjct: 192 -----------------------------IKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222

Query: 177 FRSMRECGVVPNLYTYNALMDGYCK---VADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
              ++  G  PN+ TYN L+DG+CK      + RA     EML + + PN +TF  L+DG
Sbjct: 223 IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDG 282

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            CK   + AA N F  M + G+ PNI  YN LI+G    G L EA++L  +M    + P+
Sbjct: 283 FCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + T+N LI G C    ++ A  L   + ++ ++ N +T+N++ID +CK G ME+  ++ +
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHN 402

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M ++G+ PNV T++ LI G C+  N+ AA  L  EM    L  DVV +  LI G  KDG
Sbjct: 403 SMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDG 462

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSP 471
              +  +L  EML   + P+  T ++L+ G    G +  AL     +EK  K        
Sbjct: 463 EPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK------RA 516

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y  +I+  C  G++  A++L ++M    L P+  TY              DV+ L 
Sbjct: 517 NVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY--------------DVVRL- 561

Query: 532 ADMIKMGIVPD 542
            +M++ G +PD
Sbjct: 562 -EMLEKGFIPD 571



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 216/400 (54%), Gaps = 26/400 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE-- 105
           N + F+  I    + G + +A  V   I+     P I   N L++G  KKG    ++   
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258

Query: 106 -FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              +EM+   +  + +T+  LID  C   +V+ A N F+EM  +G++P +V Y  LI+GL
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            N  K+ EA +++  M   G+ PN+ T+NAL++G+CK   +  A + + ++   +L PN 
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +TF  ++D  CK G +         M   G+FPN+  YNCLI G C+  N+  A  L +E
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME +E+  DV TYNILI G C  G+   AE LL +M   G+  N VTYN+L+DGYC EG+
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ AL V +QM ++G   NVVT++ LI G CK G ++ A  L  EM+ K L P+   +  
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY-- 556

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSV----FTVSSL 440
                       + +RL  EMLE    P +    + +SS+
Sbjct: 557 ------------DVVRL--EMLEKGFIPDIEGHLYNISSM 582



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 261/541 (48%), Gaps = 37/541 (6%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           FN  V S L++ F +        W  ++  +   ++    +L+ L    K+  V  F ++
Sbjct: 52  FNAGVDSELVLRFFQ--------WSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDK 103

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP--TVVIYTILIHGLCNE 167
           +V                    + +     ++F  ++  G  P    +I  +L+      
Sbjct: 104 LV--------------------KNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTN 143

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +FR +++ G   +L + N L+    K  +       Y EM+   +QPN+ TF
Sbjct: 144 LEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTF 203

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK---AGNLFEAMSLCSE 284
            + ++GLCK G+L  A +    +  +G  PNI  YN LIDGHCK   AG ++ A ++  E
Sbjct: 204 NIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKE 263

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M   +I P+  T+N LI G C    +  A+   ++M ++G+  N+VTYNSLI+G    G 
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A+++  +M   G++PN+VTF++LI+G CK   I  A  L+ ++  + LVP+ + F  
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +ID   K G M+E   L+  ML+  I P+V T + LI GL +N  +  A        ++ 
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLL----NEM 439

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +      + V Y  +I   C DG+  KA KL  +M +  ++P++ TY T++ G      +
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
              + +   M K G   + V   V+++G+ + G L+ A R    + E  +  + T     
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559

Query: 585 R 585
           R
Sbjct: 560 R 560



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 5/283 (1%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGL 94
           NA   ++     P++  +++LI   S  G ++EA+ ++ K+  L   P I   NAL+NG 
Sbjct: 294 NAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            KK       + ++++    LV + +T+  +ID  C  G + +   L + M+D+GI P V
Sbjct: 354 CKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  LI GLC    +  A+ +   M    +  ++ TYN L+ G+CK  + ++A +   E
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ML+  ++PN VT+  LMDG C  G L+AA      M K G   N+  YN LI G CK G 
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           L +A  L +EM +  ++P+  TY+++   +   G +   EG L
Sbjct: 534 LEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHL 576


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 264/518 (50%), Gaps = 22/518 (4%)

Query: 15  RC-LIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALW 73
           RC  ++D+    L       + + V   L +  I K +   FS LI A+SE G  E+A+ 
Sbjct: 91  RCRTVQDLIIGKLIKENAFELYWKVLQELKNSAI-KISSEAFSVLIEAYSEAGMDEKAVE 149

Query: 74  VY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
            +   R  +  P + A N +L+ L++K  F      Y +M+ C L  DVVTYG+LI   C
Sbjct: 150 SFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLC 209

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
                  AL LFDEM D+GI P  +IY+I++ GLC   K+ +A+ +F  MR  G   +L 
Sbjct: 210 KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L++G+CK   ++ A      +        V+ +G L++GL +      A  ++  M
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            +  + P++ +Y  +I G  + G + EA++L  EM +  + PD   YN LIKG C +G L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + AE L  ++ K     N  TY+ LI G CK G + KA  +  +M + G  P+VVTF+SL
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 371 IDGQCKAGNIDAAMGLYTEMVI---KSL----------VPDVVVFTALIDGLSKDGNMKE 417
           I+G CKA  ++ A  L+ +M I    SL          V D+     +++ L + G + +
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             +L  +++++ + P + T + LI+G  K G I+ A   F E   K   G+  P+ V Y 
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK---GHM-PDSVTYG 565

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            +I  L   G+   A ++F  M      P++ TY T++
Sbjct: 566 TLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 45/514 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + ++  LIK+  F+  W+  +E+    +      + VLI+     G   KA+  F  M D
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
              +P +  + +++H L  +   + A +++  M +C + P++ TY  L+ G CK      
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL  + EM    + PN + + +++ GLC+  ++  A   F  M   G   ++  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK+G L +A +L   + K      V  Y  LI GL    + E A    QKM +E I  
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V+ Y  +I G  +EG + +AL++  +MTE+G+ P+ + +++LI G C  G +D A  L 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+      P+   ++ LI G+ K+G + +   ++KEM +    PSV T +SLI+GL K 
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 448 GRISNAL------------NFFLEKTDKTDGGY------------CSPNHVL-------- 475
            R+  A             + FL  +  TD  +            C    +L        
Sbjct: 457 NRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 476 ------------YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                       Y  +I   C  G I  A KLF +M+     PD+ TY T++ GL RA R
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576

Query: 524 MLDVMMLLADMIKMGIVPD-AVINQVMVRGYQEN 556
             D + +   M+K G VP+ +    +M    +EN
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 206/423 (48%), Gaps = 17/423 (4%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            +  ++I  L  EN       + + ++   +  +   ++ L++ Y +     +A+E +  
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M   + +P++  F +++  L +      A   +  M K  + P++  Y  LI G CK   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             +A+ L  EM    I P+   Y+I++ GLC   ++  A+ L  KM   G   +++TYN 
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L++G+CK G ++ A ++   +T+ G    V+ +  LI+G  +A   + A   Y +M+ ++
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PDV+++T +I GLS++G + E L L  EM E  + P     ++LI G    G +  A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +  LE   K D   C PN+  Y+ +I  +C +G I KA  +F +M      P   T+ ++
Sbjct: 394 SLRLE-ISKHD---CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 515 LRGLLRAKRMLDVMMLLADM---------IKMGIVPDAVIN----QVMVRGYQENGDLKS 561
           + GL +A R+ +  +L   M         +++    D V +    QVM+    E+G +  
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509

Query: 562 AFR 564
           A++
Sbjct: 510 AYK 512



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 19/328 (5%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVL--PA--------------IQACNALLNG 93
           PSV  F++LI    +   +EEA  ++ ++E++  P+              I +   ++  
Sbjct: 441 PSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMER 500

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L + G     ++   ++V  G++ D+ TY +LI+  C  G++  A  LF EM  KG  P 
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPD 560

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  LI GL    +  +A  +F  M + G VP   TY  +M   C+  +++ AL  + 
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           + L            V+ +      EL+ A    + M       ++  Y   + G  +A 
Sbjct: 621 KYLRDFRGWEDEKVRVVAESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAK 679

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
              EA ++ S ++ F+++    +  +LI  LC V  L+ A  +     + G        N
Sbjct: 680 RDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICN 739

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            L+         + AL + ++M   G E
Sbjct: 740 QLLCNLLHLDRKDDALFLANRMEASGTE 767


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 168/645 (26%), Positives = 290/645 (44%), Gaps = 110/645 (17%)

Query: 26  LKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---- 81
           L +  P H+   +         P+F+ S    ++ AFS     + AL  +R +  L    
Sbjct: 57  LATSSPSHLPRLLGLLPRMRHRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCN 116

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG----LVADVVTYGVLIDCCCGQGDVMK 137
           P +++ N LL+  ++  ++     F+  +        +  ++ TY +++   C +GDV +
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM--------------VEAESM------- 176
           A++LF  +  +G+ P  V Y+ L+ GL   +++              V+A+++       
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236

Query: 177 --FRS-------------MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             FR+             +R+ G  PNL TY  ++DG CK+     A E +  M+ +N Q
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN------- 274
            + VT+G+L+ GLC+ G++ +A   +  M K G+  ++ VYN LI G C+ G        
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356

Query: 275 ---------------------------LFEAMSLCSEMEK-FEISPDVFTYNILIKGLCG 306
                                      + EA  L  ++E     SPD  T+  LI GLC 
Sbjct: 357 WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCE 416

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G    A  +L+     G   +V +Y+S+I+ +CK+G    A  V   M + G +PN   
Sbjct: 417 NGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHV 476

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++LI+G C+   I+ A+ +Y EM      P ++ +  LIDGL K    +E   L KEML
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD---------------------KTD 465
           E    P + T +SLI GL ++ ++  AL  + E  D                     K D
Sbjct: 537 ERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVD 596

Query: 466 GGY----------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             +          CSPN V Y  ++      G I KA+ L++ +  + L+PD  TY T +
Sbjct: 597 EAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRI 656

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +GL    R  + ++LL +++  GI+P  +   ++VR   + G ++
Sbjct: 657 KGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 14/334 (4%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK----FEISPDVFTYNILIKGLCGVG 308
            G  P +  +N L+D   +A    +A +  + +        I+P++ TYNI+++ LC  G
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            ++ A  L   + + G+  + VTY++L+ G  K   ++ AL +  +M   GV+ + V ++
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +L+ G  + G  + AM ++ ++V      P++  +  ++DGL K G  KE   ++  M+ 
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
                   T   LIHGL ++G + +A   +   +D    G      V Y ++I+  C  G
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVY---SDMVKAGLVLDVSV-YNSLIKGFCEVG 348

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK-MGIVPDAVIN 546
           +  +A K +       +R    TY  M +GLL +  + +   LL  +       PD V  
Sbjct: 349 RTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTF 407

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             ++ G  ENG    AF   E L+++R    E +
Sbjct: 408 GTLIHGLCENGYANRAF---EILEDARNSGEELD 438


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 225/431 (52%), Gaps = 4/431 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I     LL+ + K  ++D V   +E+M + G+   + T  +++ C C      +A  
Sbjct: 80  LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +M+  G EP +V +T L++G C+ N++ +A ++F  +   G  PN+ TY  L+   C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +N A+E +++M  +  +PNVVT+  L+ GLC++G    A      M K  + PN+ 
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  LID   K G L EA  L + M +  + PDVFTY  LI GLC  G L+ A  +   M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G   N V Y +LI G+CK   +E  + +  +M++KGV  N +T++ LI G C  G  
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  ++ +M  +   PD+  +  L+DGL  +G +++ L +++ M + ++  ++ T + +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G+ K G++ +A + F     K       PN + Y  +I   C  G I +A  LF  M+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKG----MKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495

Query: 501 SDNLRPDNCTY 511
            D   P+   Y
Sbjct: 496 EDGFLPNESVY 506



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 192/357 (53%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+   P +    +LLNG     + +     +++++  G   +VVTY  LI C C    + 
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            A+ LF++M   G  P VV Y  L+ GLC   +  +A  + R M +  + PN+ T+ AL+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D + KV  +  A E Y+ M+  ++ P+V T+G L++GLC  G L  A   F  M + G +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN  +Y  LI G CK+  + + M +  EM +  +  +  TY +LI+G C VG+ + A+ +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M       ++ TYN L+DG C  G +EKAL +   M ++ ++ N+VT++ +I G CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            G ++ A  L+  +  K + P+V+ +T +I G  + G + E   L+K+M E    P+
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 224/473 (47%), Gaps = 16/473 (3%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
            A   YRKI           L NGL    +F+   + +  MV    +  ++ +  L+   
Sbjct: 46  RAFSSYRKI-----------LRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVI 93

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
                    ++LF++M   GI P +    I++H +C  ++   A      M + G  P+L
Sbjct: 94  AKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDL 153

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            T+ +L++GYC    +  A+  + ++L    +PNVVT+  L+  LCK   L  A   F  
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G  PN+  YN L+ G C+ G   +A  L  +M K  I P+V T+  LI     VG+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L  A+ L   M +  +  +V TY SLI+G C  G +++A  +   M   G  PN V +++
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G CK+  ++  M ++ EM  K +V + + +T LI G    G       ++ +M   +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P + T + L+ GL  NG++  AL  F E   K +      N V Y  IIQ +C  G++
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIF-EYMRKRE---MDINIVTYTIIIQGMCKLGKV 449

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
             A  LF  + S  ++P+  TYTTM+ G  R   + +   L   M + G +P+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 217/442 (49%), Gaps = 4/442 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+LF  M+     P+++ +T L+  +   N+     S+F  M+  G+ P L T N +M 
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C  +   RA  F  +M+    +P++VTF  L++G C    +  A   F  +   G  P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI   CK  +L  A+ L ++M      P+V TYN L+ GLC +G+   A  LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M K  I  NV+T+ +LID + K G + +A  + + M +  V P+V T+ SLI+G C  
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  ++  M      P+ V++T LI G  K   +++ ++++ EM +  +  +  T 
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G    GR   A   F + + +       P+   Y  ++  LC +G++ KA  +F 
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRR----APPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            MR   +  +  TYT +++G+ +  ++ D   L   +   G+ P+ +    M+ G+   G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482

Query: 558 DLKSAFRCSEFLKESRIGSSET 579
            +  A    + +KE     +E+
Sbjct: 483 LIHEADSLFKKMKEDGFLPNES 504



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 154/311 (49%), Gaps = 5/311 (1%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVL 81
           L K+R  +H    +FN + +    + N   ++ L+    E+G   +A W+ R   K  + 
Sbjct: 198 LCKNRHLNHAV-ELFNQMGT-NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +    AL++  +K GK     E Y  M+   +  DV TYG LI+  C  G + +A  +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M   G  P  VIYT LIHG C   ++ +   +F  M + GVV N  TY  L+ GYC 
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V   + A E +++M      P++ T+ VL+DGLC  G++  A   F +M K  +  NI  
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  +I G CK G + +A  L   +    + P+V TY  +I G C  G +  A+ L +KM 
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495

Query: 322 KEGILANVVTY 332
           ++G L N   Y
Sbjct: 496 EDGFLPNESVY 506



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 165/371 (44%), Gaps = 39/371 (10%)

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
           C  +    +Y  ++         N AL+ +  M+H    P+++ F  L+  + K+     
Sbjct: 42  CFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV 101

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
             + F  M   G+ P +   N ++   C +     A     +M K    PD+ T+  L+ 
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           G C   ++E A  L  ++   G   NVVTY +LI   CK   +  A+ + +QM   G  P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           NVVT+++L+ G C+ G    A  L  +M+ + + P+V+ FTALID   K G + E   LY
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M++  + P VFT                                       Y ++I  
Sbjct: 282 NVMIQMSVYPDVFT---------------------------------------YGSLING 302

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G + +A ++F  M  +   P+   YTT++ G  ++KR+ D M +  +M + G+V +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 543 AVINQVMVRGY 553
            +   V+++GY
Sbjct: 363 TITYTVLIQGY 373


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 219/390 (56%), Gaps = 10/390 (2%)

Query: 32  HHVCYSVFNALNSLEI----PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPA 83
            H+C S      +LE+    P+ N   ++T+I  F   G ++ AL + R++     + P 
Sbjct: 122 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 180

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
                 +++G  K G+ D   + ++EM+  G V  + V Y  LI   C QG +  AL   
Sbjct: 181 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 240

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M+++G+  TV  Y +L+H L  + +  EA  +   M   G+ P+++TYN L++G+CK 
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 300

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V +ALE +  M    ++  VVT+  L+  L K G+++     F    + G+ P++ +Y
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+ H  +GN+  A  +  EMEK  I+PD  TYN L++GLC +G+++ A  L+ +M +
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 420

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  ++VTYN+LI GY  +GD++ AL + ++M  KG  P ++T+++LI G CK G  D 
Sbjct: 421 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 480

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +  EMV   + PD   + +LI+GL+ +
Sbjct: 481 AENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 245/488 (50%), Gaps = 15/488 (3%)

Query: 37  SVFNALNSLEI-PKFN--PSVFSTLII-AFSEMGHIEEALWVYRKIEVLPAIQACNALLN 92
           S   AL+ L + P  +  PS    L++ A + +     +L +Y +++ L ++    A L+
Sbjct: 29  SADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSL-SLPISTASLH 87

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L+        +  + +M    L     T+ +++   C  G   +AL L  +M      P
Sbjct: 88  PLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RP 143

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEF 211
             V Y  +I G C+  ++  A  + R MRE  G+ PN YTY  ++ G+CKV  V+ A++ 
Sbjct: 144 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 203

Query: 212 YHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           + EML    ++P  V +  L+ G C  G+L  A  +   M + GV   +  YN L+    
Sbjct: 204 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 263

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G   EA  L  EM    ++PDVFTYNILI G C  G ++ A  + + M + G+ A VV
Sbjct: 264 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 323

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TY +LI    K+G +++   +  +   +G+ P++V +++LI+    +GNID A  +  EM
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K + PD V +  L+ GL   G + E  +L  EM E  I P + T ++LI G    G +
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +AL    E  +K   G+ +P  + Y A+IQ LC +GQ   A  +  +M  + + PD+ T
Sbjct: 444 KDALRIRNEMMNK---GF-NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 499

Query: 511 YTTMLRGL 518
           Y +++ GL
Sbjct: 500 YISLIEGL 507



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF +M    +      + I++  LC+  K   A  + R M      PN  TYN ++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  AL+   EM     + PN  T+G ++ G CKVG +  A   F  M   G V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P   +YN LI G+C  G L  A+     M +  ++  V TYN+L+  L   G+   A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M  +G+  +V TYN LI+G+CKEG+++KAL +   M+ +GV   VVT+++LI    
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +     L+ E V + + PD+V++ ALI+  S  GN+     +  EM + +I P   
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL   GR+  A     E T++       P+ V Y  +I      G +  A ++
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERG----IQPDLVTYNTLISGYSMKGDVKDALRI 449

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            ++M +    P   TY  +++GL +  +  D   ++ +M++ GI PD
Sbjct: 450 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A ++F  M    +     T+N ++   C      RALE  
Sbjct: 78  SLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 137

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA +    M  + G+ PN + Y  +I G CK
Sbjct: 138 RQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 193

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+ +  EM  K E+ P+   YN LI G C  G+L+ A     +M + G+   V 
Sbjct: 194 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 253

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +G   +A  +  +M  KG+ P+V T++ LI+G CK GN+  A+ ++  M
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 313

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + +   VV +TALI  LSK G ++ET +L+ E +   I P +   ++LI+    +G I
Sbjct: 314 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 373

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A KL  +M    ++PD  T
Sbjct: 374 DRAFEIMGEMEKKR----IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    +++G  +NG
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 180/359 (50%), Gaps = 10/359 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +  A+ +  EM E+  I+P+ +TY  +I G C VG+++ A  +  +M  +G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
               V YN+LI GYC +G ++ AL    +M E+GV   V T++ L+      G    A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L PDV  +  LI+G  K+GN+K+ L +++ M    +  +V T ++LI+ L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G++      F E   +       P+ VLY A+I +    G I +A ++  +M    + 
Sbjct: 334 KKGQVQETDKLFDEAVRRG----IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD+ TY T++RGL    R+ +   L+ +M + GI PD V    ++ GY   GD+K A R
Sbjct: 390 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 448



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 3/294 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ LI  + + G ++ AL +  R +E  V   +   N L++ L   G+    +E  EEM
Sbjct: 219 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 278

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  DV TY +LI+  C +G+V KAL +F+ M  +G+  TVV YT LI+ L  + ++
Sbjct: 279 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 338

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E + +F      G+ P+L  YNAL++ +    +++RA E   EM    + P+ VT+  L
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M GLC +G +  A      M + G+ P++  YN LI G+   G++ +A+ + +EM     
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +P + TYN LI+GLC  GQ + AE ++++M + GI  +  TY SLI+G   E +
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 161/308 (52%), Gaps = 10/308 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L ++M +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL +  +M E+G + PN  T+ ++I G CK G +D A+ ++ EM+ K  V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    G +   L     M+E  +  +V T + L+H LF +GR + A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY- 272

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++  G   +P+   Y  +I   C +G + KA ++F +M    +R    TYT ++
Sbjct: 273 ---ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 329

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
             L +  ++ +   L  + ++ GI PD V+   ++  +  +G++  AF     +++ RI 
Sbjct: 330 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389

Query: 576 SSETEGHT 583
             +   +T
Sbjct: 390 PDDVTYNT 397


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 248/493 (50%), Gaps = 9/493 (1%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQA 86
           K +    S+   ++S  IP  N    + LI +F  +  +  A  V  KI  L   P   +
Sbjct: 88  KRYSTVLSLSRKMDSFGIPH-NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTAS 146

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
              L+ GL  +G+       +++M+  G   DVV Y  LI+  C  G    A+ L   M 
Sbjct: 147 FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSME 206

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
               +P VV+Y  LIH LC + +  +A ++F  M   G+ PN+ T N+L+   C + +  
Sbjct: 207 KGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWK 266

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
                 +EM+   + PN ++   ++D LCK G +  A +    M + GV P++  Y  LI
Sbjct: 267 HVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALI 326

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DGHC    + EA+ +   M     +P+VF+YN LI G C + +++ A  L ++M ++ ++
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VTYN+LI G C  G ++ A+++  +M   G  P++VT+  L+D  CK  ++D AM L
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL 446

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              +   +L PD+ ++T +IDG+ + G +++   L+  +    + P+V+T + + HGL K
Sbjct: 447 LKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCK 506

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G +  A   F+E     D   CS +   Y  I Q    + +  +A +L  +M +     
Sbjct: 507 RGLLDEATKLFME----MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSC 562

Query: 507 DNCTYTTMLRGLL 519
           D  T TT+L G+L
Sbjct: 563 DVST-TTLLVGML 574



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 255/543 (46%), Gaps = 26/543 (4%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     +L  + K  ++ +V     +M   G+  +V T  VLI+  C    V  A ++
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P    +T LI GLC E ++ EA  +F  M   G  P++  Y  L++G CK
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + A+     M   N QP+VV +G L+  LCK  +   A N F  M   G+ PNI  
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N L+   C  G      +L +EM   +I P+  +   ++  LC  G +  A  ++  M+
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G+  +VVTY +LIDG+C   +M++A+ V   M  KG  PNV ++++LI+G CK   +D
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM  + L+P+ V +  LI GL   G +++ + L++EM+     P + T   L+
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A+          +G    P+  +Y  +I  +C  G++  A  LFS++ S
Sbjct: 432 DYLCKNCHLDKAMALL----KAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSS 487

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L+P+  TY  M  GL +   + +   L  +M +     D      + +G+  N +   
Sbjct: 488 KGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSR 547

Query: 562 AFRCSEFLKE-----------------SRIGSSETEGHTTRSFLGHL----KPTVY-KEQ 599
           A +  E +                   S  G  ++E H       HL    K TV+ KE 
Sbjct: 548 AIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKED 607

Query: 600 DLS 602
           D++
Sbjct: 608 DIN 610



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 221/430 (51%), Gaps = 11/430 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L S+E     P V  + TLI +  +     +A  ++ ++    + P I  CN+L+  L  
Sbjct: 202 LRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCN 261

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G++  V     EMV   ++ + ++   ++D  C +G V +A ++ D M   G+EP VV 
Sbjct: 262 LGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVT 321

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT LI G C  ++M EA  +F  M   G  PN+++YN L++GYCK+  +++A+  + EM 
Sbjct: 322 YTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMC 381

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              L PN VT+  L+ GLC VG L+ A   F  M   G  P++  Y  L+D  CK  +L 
Sbjct: 382 RQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLD 441

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +AM+L   +E   + PD+  Y I+I G+C  G+LE A  L   +  +G+  NV TYN + 
Sbjct: 442 KAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMT 501

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G CK G +++A  +  +M E     +  T++++  G  +      A+ L  EM+ +   
Sbjct: 502 HGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS 561

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEM---LEAKITPSVFTVSSLIHGLFKNGRISNA 453
            DV   T L+  LS DG  +      ++M   L  ++  +VF     I+ L   G++ + 
Sbjct: 562 CDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKEDDINAL---GKVISD 618

Query: 454 LNFFLEKTDK 463
           LN +LE+ ++
Sbjct: 619 LNDWLEELEE 628



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 210/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ M+     P++V +  ++  +    +     S+ R M   G+  N+YT N L++
Sbjct: 58  ALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLIN 117

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  VN A     ++L    QP+  +F  L+ GLC  G++  A + F  M   G  P
Sbjct: 118 SFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQP 177

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ +Y  LI+G CK G+   A+ L   MEK    PDV  Y  LI  LC   Q   A  L 
Sbjct: 178 DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLF 237

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  N+VT NSL+   C  G+ +   ++ ++M +  + PN ++ ++++D  CK 
Sbjct: 238 SEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKE 297

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  +   M    + PDVV +TALIDG      M E ++++  M+     P+VF+ 
Sbjct: 298 GMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSY 357

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI+G  K  R+  A+  F E   +       PN V Y  +I  LC+ G++  A  LF 
Sbjct: 358 NTLINGYCKIERMDKAMYLFEEMCRQK----LIPNTVTYNTLIHGLCHVGRLQDAIALFR 413

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  TY  +L  L +   +   M LL  +    + PD  I  +++ G    G
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473

Query: 558 DLKSA 562
           +L+ A
Sbjct: 474 ELEDA 478



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 4/395 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  M      P++  +  ++    KV   +  L    +M    +  NV T 
Sbjct: 53  NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++  C +  +  A +    + K G  P+   +  LI G C  G + EA+ L  +M  
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDV  Y  LI GLC  G    A  LL+ M K     +VV Y +LI   CK+    +
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ 232

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ S+M  KG+ PN+VT +SL+   C  G       L  EMV   ++P+ +  T ++D
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G + +   +   M ++ + P V T ++LI G      +  A+  F    D     
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVF----DMMVHK 348

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C+PN   Y  +I   C   ++ KA  LF +M    L P+  TY T++ GL    R+ D 
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + L  +M+  G +PD V  ++++    +N  L  A
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKA 443



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 4/371 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N     Y     ++ AL  ++ MLH +  P++V F  ++  + KV       +    M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
            FG+  N++  N LI+  C    +  A S+ +++ K    PD  ++  LIKGLC  GQ+ 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L  KM  EG   +VV Y +LI+G CK G    A+ +   M +   +P+VV + +LI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              CK      A  L++EM+ K + P++V   +L+  L   G  K    L  EM+++KI 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  ++++++  L K G ++ A +      D        P+ V Y A+I   C   ++ +
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDV----VDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A K+F  M      P+  +Y T++ G  + +RM   M L  +M +  ++P+ V    ++ 
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397

Query: 552 GYQENGDLKSA 562
           G    G L+ A
Sbjct: 398 GLCHVGRLQDA 408


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 245/476 (51%), Gaps = 39/476 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     +L  L+K   +  V   + +M   G+ +++VT  +LI+C    G    + ++
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  ++ KG EP  +                                   T   L+ G C 
Sbjct: 127 FSNILKKGYEPDAI-----------------------------------TLTTLIKGLCL 151

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D+++AL F+ ++L    Q N V++  L++GLCKVG+ +AA      +    V  ++ +
Sbjct: 152 KGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVM 211

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +IDG CK   + +A    SEM    I P V TYN LI GLC +GQL+ A GLL KM 
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            E I   V T++ L+D +CKEG +++A +V   M +K V+PN+VT++SL++G C    ++
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  M    + PDV  ++ +I G  K   + E ++L++EM   +I P V T +SLI
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLI 391

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K+GRIS AL    E  D+       PN + Y +++ ALC +  + KA +L + ++ 
Sbjct: 392 DGLCKSGRISYALKLIGEMHDRGQ----PPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            N++P  CTY  ++ GL ++ R+ D   +  D++  G   D      M++G+ + G
Sbjct: 448 HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 220/403 (54%), Gaps = 3/403 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N    S LI  FS++GH   +  V+  I      P       L+ GL  KG       F+
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFH 162

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++++  G   + V+Y  LI+  C  G    AL +   +  K +   VV+Y  +I G+C +
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A   +  M    + P + TYN L+ G C +  +  A+   H+M+  N+ P V TF
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+D  CK G+++ A N FV M K  V PNI  YN L++G+C    + +A S+ + M +
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PDV +Y+I+I G C +  ++ A  L ++M+ + I  +VVTYNSLIDG CK G +  
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISY 402

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +  +M ++G  PN++T++SL+D  CK  ++D A+ L T++   ++ P V  +  LI+
Sbjct: 403 ALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILIN 462

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           GL K G +K+  ++++++L       V+T +++I G  K G +
Sbjct: 463 GLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 5/375 (1%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           +Y++  +     + ++  +  ++ +LH  N  P+++ FG ++  L K        +    
Sbjct: 35  SYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQ 94

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+  N+   + LI+   + G+   + S+ S + K    PD  T   LIKGLC  G 
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A     K+   G   N V+Y +LI+G CK G  + AL +  ++  K V  +VV +++
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +IDG CK   ++ A   Y+EMV K + P VV +  LI GL   G +K+ + L  +M+   
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P+V+T S L+    K G++  A N F+    K       PN V Y +++   C   ++
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKD----VKPNIVTYNSLMNGYCLVNEV 330

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            KA  +F+ M    + PD  +Y+ M+ G  + K + + M L  +M    I PD V    +
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390

Query: 550 VRGYQENGDLKSAFR 564
           + G  ++G +  A +
Sbjct: 391 IDGLCKSGRISYALK 405



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 196/391 (50%), Gaps = 4/391 (1%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++  +  ++    K    +  +  + +M  + +  N+VT  +L++   ++G    + + 
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F ++ K G  P+      LI G C  G++ +A+    ++       +  +Y  LI GLC 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           VGQ + A  +L+++  + +  +VV YN++IDG CK+  +  A    S+M  K + P VVT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++LI G C  G +  A+GL  +M+++++ P V  F+ L+D   K+G +KE   ++  M+
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +  + P++ T +SL++G      ++ A + F   T    G   +P+   Y+ +I   C  
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIF--NTMAQIG--VAPDVHSYSIMISGFCKI 362

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
             + +A KLF +M    + PD  TY +++ GL ++ R+   + L+ +M   G  P+ +  
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             ++    +N  +  A      LK+  I  S
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 54/195 (27%)

Query: 13  NARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEE 70
           N  CL+ +V +             S+FN +  + +    P V  +S +I  F ++  ++E
Sbjct: 322 NGYCLVNEVNK-----------AESIFNTMAQIGVA---PDVHSYSIMISGFCKIKMVDE 367

Query: 71  ALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM----------------- 110
           A+ ++ ++   ++ P +   N+L++GL K G+     +   EM                 
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLD 427

Query: 111 VLC------------------GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            LC                   +   V TY +LI+  C  G +  A  +F++++  G   
Sbjct: 428 ALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNI 487

Query: 153 TVVIYTILIHGLCNE 167
            V  Y  +I G C +
Sbjct: 488 DVYTYNTMIKGFCKK 502


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 249/477 (52%), Gaps = 10/477 (2%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  + ++G +E+AL ++ ++I     P     N  +NGL +        +  + MV 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G   DV TY ++++C C  G + +A  + ++M+D+G  P +  +  LI  LC  N++ E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   GV P++YT+N L++  CKV D + AL  + EM +    P+ VT+  L+D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC +G+L  A +    M   G   +   YN +IDG CK   + EA  +  +M+   IS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  T+N LI GLC   +++ A GL+ +M  EG+  N +TYNS++  YCK+GD++KA  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G E +VVT+ +LI+G CKAG    A+ +   M IK + P    +  ++  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
            N+++ L L++EM E    P   T   +  GL +  G I  A +F LE  DK      S 
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             +L   ++  L  D   ++A ++   M   +LR  +    + +RG L+ ++  D +
Sbjct: 675 FRMLAEGLLN-LGMDDYFIRAIEII--MEKVDLRESD---VSAIRGYLKIRKFYDAL 725



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 266/559 (47%), Gaps = 16/559 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           SV++ + +  I K +   F+TL+ A      +  A+ +  ++    V P       L+ G
Sbjct: 167 SVYSEMGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            +++G  ++       M+  G  A  VT  VLI+  C  G V  AL    + I  G EP 
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            + Y   ++GLC  + +  A  +   M + G  P+++TYN +++  CK   +  A    +
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M+     P++ TF  L+  LC    L  A +    +   GV P+++ +N LI+  CK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +   A+ L  EM+    +PD  TYN LI  LC +G+L  A  LL+ M   G   + +TYN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++IDG CK+  +E+A  V  QM  +G+  N +TF++LIDG CK   ID A GL  +M+ +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L P+ + + +++    K G++K+   + + M        V T  +LI+GL K GR   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           L     +  +  G   +P    Y  ++Q+L     I  A  LF +M      PD  TY  
Sbjct: 586 LKVL--RGMRIKGMRPTPKA--YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641

Query: 514 MLRGLLRA----KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           + RGL R     K   D M+   +M+  G +P+    +++  G    G      R  E +
Sbjct: 642 VFRGLCRGGGPIKEAFDFML---EMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698

Query: 570 KESRIGSSETEGHTTRSFL 588
            E ++   E++    R +L
Sbjct: 699 ME-KVDLRESDVSAIRGYL 716



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 244/530 (46%), Gaps = 44/530 (8%)

Query: 74  VYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           +  +++ L  IQA     N LLN L++  K   +   Y EM   G+  DVVT+  L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    V  A+ + +EM  +G+ P    +T L+ G   E  +  A  +   M E G     
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 190 YTYNALMDGYCKVADVNRALEFYHE----------------------------------- 214
            T N L++GYCK+  V  AL +  +                                   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+     P+V T+ ++++ LCK G+L  A      M   G  P+I  +N LI   C    
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+ L  ++    +SPDV+T+NILI  LC VG    A  L ++M   G   + VTYN+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LID  C  G + KAL +   M   G   + +T++++IDG CK   I+ A  ++ +M ++ 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  + + F  LIDGL KD  + +   L  +M+   + P+  T +S++    K G I  A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +        T  G+   + V Y  +I  LC  G+   A K+   MR   +RP    Y  +
Sbjct: 552 DIL---ETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENGDLKSAF 563
           L+ L R   + D + L  +M ++G  PDA+  +++ RG  +  G +K AF
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 657



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 225/454 (49%), Gaps = 6/454 (1%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           L G+ AD V Y  L++    +G  MK L +++ EM  +GI+P VV +  L+  LC  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  M   M   GV P+  T+  LM G+ +   +  AL     ML        VT  VL
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +  A  +       G  P+   YN  ++G C+  ++  A+ +   M +   
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDVFTYNI++  LC  GQLE A+G+L +M   G L ++ T+N+LI   C    +E+AL 
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  Q+T KGV P+V TF+ LI+  CK G+   A+ L+ EM      PD V +  LID L 
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + + L L K+M       S  T +++I GL K  RI  A   F    D+ D    S
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF----DQMDLQGIS 493

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N + +  +I  LC D +I  A  L + M S+ L+P+N TY ++L    +   +     +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M   G   D V    ++ G  + G  + A +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 72/362 (19%)

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE----------------- 323
           L + + + + +P    Y  +I+ L  VG L+  + L+ +M +E                 
Sbjct: 61  LNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYE 120

Query: 324 --------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
                               GI A+ V YN L++   +   M+   SV S+M  +G++P+
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF++L+   C+A  +  A+ +  EM  + + PD   FT L+ G  ++G+++  LR+  
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCS 470
            MLE   + +  TV+ LI+G  K GR+ +AL +  ++    DG             G C 
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI--ADGFEPDQITYNTFVNGLCQ 298

Query: 471 PNHV--------------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +HV                     Y  ++  LC +GQ+ +A  + + M      PD  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + T++  L    R+ + + L   +   G+ PD     +++    + GD   A R  E +K
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 571 ES 572
            S
Sbjct: 419 NS 420


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 256/482 (53%), Gaps = 4/482 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP     N L + + +  ++D V  F + M L G+  D+ T  ++I+C C +  ++ A +
Sbjct: 67  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +       G EP  + ++ L++G C E ++ EA ++   M E    P+L T + L++G C
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V+ AL     M+ +  QP+ VT+G +++ LCK G    A + F  M +  +  ++ 
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +ID  CK G+  +A+SL +EME   I  DV TY+ LI GLC  G+ +    +L++M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
               I+ +VVT+++LID + KEG + +A  + ++M  +G+ P+ +T++SLIDG CK   +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  ++  MV K   PD+V ++ LI+   K   + + +RL++E+    + P+  T ++L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G  ++G+++ A   F E   +       P+ V Y  ++  LC +G++ KA ++F  M+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRG----VPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              +      Y  ++ G+  A ++ D   L   +   G+ PD V   VM+ G  + G L 
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542

Query: 561 SA 562
            A
Sbjct: 543 EA 544



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 247/486 (50%), Gaps = 11/486 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L+ AFS +G      W   K+   P     + L+NG   +G+        + MV      
Sbjct: 121 LLFAFSVLGRA----W---KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+VT   LI+  C +G V +AL L D M++ G +P  V Y  +++ LC       A  +F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R M E  +  ++  Y+ ++D  CK    + AL  ++EM    ++ +VVT+  L+ GLC  
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+          M    + P++  ++ LID   K G L EA  L +EM    I+PD  TY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G C    L  A  +   M  +G   ++VTY+ LI+ YCK   ++  + +  +++ 
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+ PN +T+++L+ G C++G ++AA  L+ EMV + + P VV +  L+DGL  +G + +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L ++++M ++++T  +   + +IHG+    ++ +A + F   +DK       P+ V Y 
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG----VKPDVVTYN 529

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I  LC  G + +A  LF  M+ D   PD+ TY  ++R  L    ++  + L+ +M   
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589

Query: 538 GIVPDA 543
           G   D+
Sbjct: 590 GFSADS 595



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 244/474 (51%), Gaps = 8/474 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            FSTL+  F   G + EA+  V R +E+   P +   + L+NGL  KG+        + M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D VTYG +++  C  G+   AL+LF +M ++ I+ +VV Y+I+I  LC +   
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S+F  M   G+  ++ TY++L+ G C     +   +   EM+  N+ P+VVTF  L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D   K G+L  A   +  M   G+ P+   YN LIDG CK   L EA  +   M     
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ TY+ILI   C   +++    L +++  +G++ N +TYN+L+ G+C+ G +  A  
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  +GV P+VVT+  L+DG C  G ++ A+ ++ +M    +   + ++  +I G+ 
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
               + +   L+  + +  + P V T + +I GL K G +S A   F  +  K DG  C+
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF--RKMKEDG--CT 557

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           P+   Y  +I+A      ++ + +L  +M+      D+ T   M+  +L  +R+
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST-IKMVIDMLSDRRL 610



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 4/440 (0%)

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V  A++LF+ MI     PT + +  L   +    +        + M   G+  ++YT   
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +++ YC+   +  A            +P+ +TF  L++G C  G +  A      M +  
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P++   + LI+G C  G + EA+ L   M ++   PD  TY  ++  LC  G    A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L +KM +  I A+VV Y+ +ID  CK+G  + ALS+ ++M  KG++ +VVT+SSLI G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G  D    +  EM+ ++++PDVV F+ALID   K+G + E   LY EM+   I P  
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +SLI G  K   +  A   F    D      C P+ V Y+ +I + C   ++    +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMF----DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF ++ S  L P+  TY T++ G  ++ ++     L  +M+  G+ P  V   +++ G  
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           +NG+L  A    E +++SR+
Sbjct: 467 DNGELNKALEIFEKMQKSRM 486



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ +A  +F SM +   +P    +N L     +    +  L F   M  + ++ ++ T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++  C+  +L  A +      K G  P+   ++ L++G C  G + EA++L   M + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +  PD+ T + LI GLC  G++  A  L+ +M + G   + VTY  +++  CK G+   A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +  +M E+ ++ +VV +S +ID  CK G+ D A+ L+ EM +K +  DVV +++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L  DG   +  ++ +EM+   I P V T S+LI    K G++  A   + E   +     
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG---- 345

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ + Y ++I   C +  + +A+++F  M S    PD  TY+ ++    +AKR+ D M
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L  ++   G++P+ +    +V G+ ++G L +A
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 353 SQMTEKGVEPNVVTFSSLIDG------QCKAGNIDA----AMGLYTEMVIKSLVPDVVVF 402
           +Q+ EKG   +++ +SS+ +       + + G +D     A+ L+  M+    +P  + F
Sbjct: 16  TQILEKGT--SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDF 73

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             L   +++       L   K M    I   ++T++ +I+   +  ++  A +  L +  
Sbjct: 74  NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV-LGRAW 132

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K   GY  P+ + ++ ++   C +G++ +A  L   M     RPD  T +T++ GL    
Sbjct: 133 KL--GY-EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189

Query: 523 RMLDVMMLLADMIKMGIVPDAV 544
           R+ + ++L+  M++ G  PD V
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEV 211


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 248/486 (51%), Gaps = 15/486 (3%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK   LP    CN  ++ LI         +F   +V  G      ++  ++   C  G V
Sbjct: 13  RKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQV 72

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC-GVV--PNLYTY 192
             A ++   M   G EP V+ Y  LI G C    +  A  +  S+R   G +  P++ ++
Sbjct: 73  KFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSF 132

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N+L +G+ K+  ++    +   ML     PNVVT+   +D  CK GEL+ A   F  M +
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             + PN+  + CLIDG+CKAG+L  A+SL  EM +  +S +V TY  LI G C  G+++ 
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           AE +  +M ++ +  N + Y ++IDG+ + GD + A+   ++M  +G+  ++  +  +I 
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C  G +  A  +  +M    LVPD+V+FT +++   K G MK  + +Y +++E    P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371

Query: 433 SVFTVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            V  +S++I G+ KNG++  A+ +F +EK           N V+Y  +I ALC +G  ++
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIVYFCIEKA----------NDVMYTVLIDALCKEGDFIE 421

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             +LFS +    L PD   YT+ + GL +   ++D   L   M++ G++ D +    ++ 
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481

Query: 552 GYQENG 557
           G    G
Sbjct: 482 GLASKG 487



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 243/504 (48%), Gaps = 55/504 (10%)

Query: 47  IPKF--NPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIK 96
           +P+F   P V S  +LI      G I  A  V   +         P I + N+L NG  K
Sbjct: 82  MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
               D V+               V  GV++ CC                      P VV 
Sbjct: 142 MKMLDEVF---------------VYMGVMLKCC---------------------SPNVVT 165

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+  I   C   ++  A   F SM+   + PN+ T+  L+DGYCK  D+  A+  Y EM 
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +  NVVT+  L+DG CK GE++ A   +  M +  V PN  VY  +IDG  + G+  
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            AM   ++M    +  D+  Y ++I GLCG G+L+ A  +++ M K  ++ ++V + +++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           + Y K G M+ A+++  ++ E+G EP+VV  S++IDG  K G +  A+  +   + K+  
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC--IEKA-- 401

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            + V++T LID L K+G+  E  RL+ ++ EA + P  F  +S I GL K G + +A   
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA--- 457

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F  KT     G    + + Y  +I  L   G +++A ++F +M +  + PD+  +  ++R
Sbjct: 458 FKLKTRMVQEGLL-LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516

Query: 517 GLLRAKRMLDVMMLLADMIKMGIV 540
              +   M     LL DM + G+V
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLV 540



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 205/398 (51%), Gaps = 16/398 (4%)

Query: 172 EAESMFRSMRECGVVPNLYTYN----ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           EA      +R+   +P+ +T N     L++  C +     +L+F   ++     P+  +F
Sbjct: 4   EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL----SLKFLAYLVSRGYTPHRSSF 59

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  +CK+G+++ A +    M +FG  P++  YN LIDGHC+ G++  A  +   +  
Sbjct: 60  NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119

Query: 288 ---FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
              F   PD+ ++N L  G   +  L+     +  M K     NVVTY++ ID +CK G+
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGE 178

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ AL     M    + PNVVTF+ LIDG CKAG+++ A+ LY EM    +  +VV +TA
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG  K G M+    +Y  M+E ++ P+    +++I G F+ G   NA+ F  +  ++ 
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                  +   Y  II  LC +G++ +A+++  DM   +L PD   +TTM+    ++ RM
Sbjct: 299 ----MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              + +   +I+ G  PD V    M+ G  +NG L  A
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 193/395 (48%), Gaps = 26/395 (6%)

Query: 25  LLKSRKPHHVCYSVF--------------NALNSLEIPKFNPSV--FSTLIIAFSEMGHI 68
           +LK   P+ V YS +               + +S++    +P+V  F+ LI  + + G +
Sbjct: 155 MLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDL 214

Query: 69  EEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           E A+ +Y   R++ +   +    AL++G  KKG+     E Y  MV   +  + + Y  +
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID    +GD   A+    +M+++G+   +  Y ++I GLC   K+ EA  +   M +  +
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           VP++  +  +M+ Y K   +  A+  YH+++    +P+VV    ++DG+ K G+L  A  
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394

Query: 246 FF-VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           +F +  A      N  +Y  LID  CK G+  E   L S++ +  + PD F Y   I GL
Sbjct: 395 YFCIEKA------NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G L  A  L  +M +EG+L +++ Y +LI G   +G M +A  V  +M   G+ P+ 
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
             F  LI    K GN+ AA  L  +M  + LV  V
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 34/413 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F++L   FS+M  ++E ++VY  + +    P +   +  ++   K G+     + +  M 
Sbjct: 132 FNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              L  +VVT+  LID  C  GD+  A++L+ EM    +   VV YT LI G C + +M 
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE M+  M E  V PN   Y  ++DG+ +  D + A++F  +ML+  ++ ++  +GV++
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC  G+L+ A      M K  + P++ ++  +++ + K+G +  A+++  ++ +    
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370

Query: 292 PDVFT------------------------------YNILIKGLCGVGQLEGAEGLLQKMY 321
           PDV                                Y +LI  LC  G     E L  K+ 
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKIS 430

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G++ +   Y S I G CK+G++  A  + ++M ++G+  +++ +++LI G    G + 
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV 490

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            A  ++ EM+   + PD  VF  LI    K+GNM     L  +M    +  +V
Sbjct: 491 EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 16/340 (4%)

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYN----CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +R A  F   + K    P+ F  N     LI+ +C   +L     L S       +P   
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR----GYTPHRS 57

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           ++N ++  +C +GQ++ AE ++  M + G   +V++YNSLIDG+C+ GD+  A  V   +
Sbjct: 58  SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117

Query: 356 TEKG---VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                   +P++V+F+SL +G  K   +D    +Y  +++K   P+VV ++  ID   K 
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKS 176

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G ++  L+ +  M    ++P+V T + LI G  K G +  A++ + E          S N
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR----MSLN 232

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y A+I   C  G++ +A +++S M  D + P++  YTT++ G  +     + M  LA
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            M+  G+  D     V++ G   NG LK A    E +++S
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 8/214 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+T++ A+ + G ++ A+ +Y K+      P + A + +++G+ K G+      ++   
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--- 396

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
             C   A+ V Y VLID  C +GD ++   LF ++ + G+ P   +YT  I GLC +  +
Sbjct: 397 --CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           V+A  +   M + G++ +L  Y  L+ G      +  A + + EML+  + P+   F +L
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +    K G + AA +  + M + G+   +   +C
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 45/231 (19%)

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           +L   + +  +G  P+  +F+S++   CK G +  A  +   M      PDV+ + +LID
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99

Query: 408 GLSKDGNMKETLRLYKEMLEAK----ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           G  ++G+++ +  L  E L A       P + + +SL +G F   ++ + +  ++    K
Sbjct: 100 GHCRNGDIR-SASLVLESLRASHGFICKPDIVSFNSLFNG-FSKMKMLDEVFVYMGVMLK 157

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                CSPN V Y+  I   C  G++  A K F  M+ D L P+  T+T +         
Sbjct: 158 C----CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL--------- 204

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                                     + GY + GDL+ A    + ++  R+
Sbjct: 205 --------------------------IDGYCKAGDLEVAVSLYKEMRRVRM 229


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 258/497 (51%), Gaps = 14/497 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++  I    +   +++A  + +K++    LP      AL++GL+K G+ D      E+M
Sbjct: 44  TYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM 103

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G    + TY V+ID     G V +A  +F +M+  G  P   +YT LI GLC   K 
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKP 163

Query: 171 VEAESMFRSM----RECGVVPNLYTYNALMDGYCKVADVNRALE-FYHEMLHHNLQPNVV 225
            EA ++++           VP++ TY +L+DG CK   +  A + F  E +     P+ V
Sbjct: 164 EEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAV 223

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++DGLCK+G +      F  M   G  P+   Y  LIDG  KA  + +A  +  +M
Sbjct: 224 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +        TYNI++ GLC  G++  A      M + G +A VVTY++L+DG+C EG++
Sbjct: 284 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 343

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A+ +  +M ++G EPN+V+++ +I G C+AG +  A   + +++ + L PDV  F A 
Sbjct: 344 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAF 403

Query: 406 IDGLSKD-GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           + GL +    + + + L++ M+    +P++ + S L+ G+ + G +  AL  F E   + 
Sbjct: 404 LHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                +P+ V++  +I+ LC  G++ +A ++F ++   +  PD  +Y ++L GL R +RM
Sbjct: 464 ----VAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERM 518

Query: 525 LDVMMLLADMIKMGIVP 541
            +  +L   M   G  P
Sbjct: 519 EEARLLSFHMKLQGCAP 535



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 229/433 (52%), Gaps = 22/433 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++ +I   S+ G +EEA  ++  +++L     P      AL+ GL K GK +  +  Y+
Sbjct: 114 TYTVVIDGLSKAGRVEEARRIF--VDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK 171

Query: 109 EMVL----CGLVADVVTYGVLIDCCCGQGDVMKALNLFD-EMIDKGIEPTVVIYTILIHG 163
           E          V DVVTY  LID  C  G +++A  +FD E +++G  P  V YT +I G
Sbjct: 172 EANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG 231

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   ++ E    F  MR  G  P+  TY AL+DG+ K   + +A   Y +ML      +
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VT+ +++DGLCK G +  A   F+ M + G    +  Y+ L+DG C  GN+  A+ L  
Sbjct: 292 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 351

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M      P++ +YNI+I+GLC  G+L  A    +K+ +  +  +V T+N+ + G C+  
Sbjct: 352 RMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL 411

Query: 344 D-MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           D +   + +   M  +G  PN+ ++S L+DG C+AG ++ A+ ++ EMV + + PDVVVF
Sbjct: 412 DTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVF 471

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA--LNFFLEK 460
             LI  L   G + E L +++E LE +  P  ++  SL+ GL +  R+  A  L+F +  
Sbjct: 472 NTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHM-- 528

Query: 461 TDKTDGGYCSPNH 473
             K  G  C+P H
Sbjct: 529 --KLQG--CAPRH 537



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 233/478 (48%), Gaps = 14/478 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + A   ++NGL ++ + D  +   E  V  G   D VTY V ID  C    V  A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M +K   PT V YT L+ GL    ++ EA ++   M E G  P L TY  ++DG  K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA------GNFFVHMAKFGV 255
              V  A   + +ML +  +P+   +  L+ GLCK G+   A       N   H A    
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT--A 182

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLC-SEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            P++  Y  LIDG CKAG + EA  +   E  +    PD  TY  +I GLC +G++E   
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               +M   G   + VTY +LIDG+ K   + KA  V  QM + G   + VT++ ++DG 
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CKAG +  A   +  M  +  V  VV ++AL+DG   +GN+   + L++ ML+    P++
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD-GQILKAS 493
            + + +I GL + G+++ A  F+ EK  +       P+   + A +  LC     +    
Sbjct: 363 VSYNIIIRGLCRAGKLAKAY-FYFEKLLQR---RLCPDVYTFNAFLHGLCQRLDTVSDGV 418

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           +LF  M S    P+  +Y+ ++ G+ RA  +   + +  +M+  G+ PD V+   ++R
Sbjct: 419 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/452 (32%), Positives = 221/452 (48%), Gaps = 10/452 (2%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+V + V+I+  C +  + +A ++ +  +  G EP  V Y + I GLC   ++ +A  + 
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           + M E   +P   TY AL+DG  K   ++ A+    +M+     P + T+ V++DGL K 
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE----ISPD 293
           G +  A   FV M   G  P+ FVY  LI G CK+G   EA +L  E    +      PD
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185

Query: 294 VFTYNILIKGLCGVGQ-LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           V TY  LI GLC  G+ LE  +    +  + G + + VTY S+IDG CK G +E+     
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M  +G EP+ VT+++LIDG  KA  I  A  +Y +M+    V   V +  ++DGL K 
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E    +  M E     +V T S+L+ G    G +S A+  F    D+     C PN
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG----CEPN 361

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLL 531
            V Y  II+ LC  G++ KA   F  +    L PD  T+   L GL  R   + D + L 
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             M+  G  P+     +++ G    G L+ A 
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 206/415 (49%), Gaps = 9/415 (2%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +V +T++I+GLC E ++ EA S+       G  P+  TYN  +DG CK   V+ A + 
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M      P  VT+  L+DGL K G L  A      M + G  P +  Y  +IDG  K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ----KMYKEGILA 327
           AG + EA  +  +M      PD F Y  LIKGLC  G+ E A  L +    + +    + 
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVC-SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +VVTY SLIDG CK G + +A  V   +  E+G  P+ VT++S+IDG CK G ++     
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + EM  +   PD V + ALIDG  K   + +  R+Y++ML++    S  T + ++ GL K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR++ A   FL   ++     C    V Y+A++   C +G +  A +LF  M      P
Sbjct: 305 AGRVAEAYATFLAMEERG----CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           +  +Y  ++RGL RA ++         +++  + PD       + G  +  D  S
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVS 415



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 165/311 (53%), Gaps = 7/311 (2%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  +  +I+G C+   L EA S+     +    PD  TYN+ I GLC   +++ A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+KM ++  L   VTY +L+DG  K G +++A++V  QM EKG  P + T++ +IDG  K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM----LEAKITP 432
           AG ++ A  ++ +M+     PD  V+TALI GL K G  +E   LYKE       A   P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V T +SLI GL K GRI  A   F    +  + G+  P+ V Y +II  LC  G++ + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVF--DDEAVERGFI-PDAVTYTSIIDGLCKLGRVEEG 241

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + F +MR+    PD  TY  ++ G ++AK +     +   M++ G V   V   +++ G
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301

Query: 553 YQENGDLKSAF 563
             + G +  A+
Sbjct: 302 LCKAGRVAEAY 312



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 182/393 (46%), Gaps = 9/393 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++  +  +++G C+   ++ A       +    +P+ VT+ V +DGLCK   +  A   
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M +    P    Y  L+DG  KAG L EAM++  +M +   SP + TY ++I GL  
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG----VEP 362
            G++E A  +   M   G   +   Y +LI G CK G  E+A ++  +   +       P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYT-EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           +VVT++SLIDG CKAG I  A  ++  E V +  +PD V +T++IDGL K G ++E    
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EM      P   T ++LI G  K   I  A   + +      G   S   V Y  I+ 
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS--GTVVST--VTYNIILD 300

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G++ +A   F  M          TY+ ++ G      +   + L   M+  G  P
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + V   +++RG    G L  A+   E L + R+
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 147/275 (53%), Gaps = 1/275 (0%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPD+  + ++I GLC   +L+ A  +L++  + G   + VTYN  IDG CK   ++ A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EK   P  VT+++L+DG  KAG +D AM +  +MV K   P +  +T +IDGLS
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G ++E  R++ +ML     P  F  ++LI GL K+G+   A   + E   +       
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P+ V Y ++I  LC  G+IL+A ++F D   +    PD  TYT+++ GL +  R+ +   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              +M   G  PDAV    ++ G+ +   +  A R
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 2/111 (1%)

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSP+ V +  +I  LC + ++ +A  +          PD  TY   + GL +A+R+ D  
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
            LL  M +   +P  V    +V G  + G L  A    E + E   G+S T
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK--GNSPT 111


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 231/475 (48%), Gaps = 4/475 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++G +  GK+  V +  EEM   GL  D  TYG L++  C  G   +A   FD MI 
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KGI+P V  Y ILIHG   +  + E  S    M E G+ P+ + +N     Y K   +++
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A++ +++M  H L PNVV +G L+D LCK+G +  A   F  M   GV PNI V+N L+ 
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C       A  L  EM    I P+   +N LI  LC VG++     L+  M   G+  
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +  +Y  LI GYC  G  ++A  V   M   G+ P  VT+++L+ G C A  ID A  L+
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 572

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+ K + P VV +  ++ GL +     E   LY  M+ +     ++T + +++GL K+
Sbjct: 573 REMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 632

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             +  A   F     K        N + +  +I AL   G+   A  LF+ + ++ L P+
Sbjct: 633 NCVDEAFKMFQSLCSKG----LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             TY  +   L+    + +   L + M K G  P++ +   +VR     GD+  A
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 229/489 (46%), Gaps = 11/489 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMV-----LCGLVADVVTYGVLIDCCCGQGDV 135
           +P   +   LL GL  + + +   E    M       C    +VV+Y ++I+    +G V
Sbjct: 158 MPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCP--PNVVSYSIVINGFFTEGQV 215

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            K  NLF EMID+GI P VV YT +I GLC       AE +F+ M + G  PN YTYN L
Sbjct: 216 DKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCL 275

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + GY  +      ++   EM    L+P+  T+G L++ LCK G  R A  FF  M + G+
Sbjct: 276 IHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGI 335

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +  Y  LI G+   G L E  S    M +  +SPD   +NI        G ++ A  
Sbjct: 336 KPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 395

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  KM + G+  NVV Y +LID  CK G ++ A    +QM  +GV PN+V F+SL+ G C
Sbjct: 396 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 455

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                + A  L  EM+ + + P+ V F  LI  L   G + E  RL   M    + P  F
Sbjct: 456 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 515

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           + + LI G    GR   A   F    D       SP  V Y  ++   C   +I  A  L
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVF----DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M    + P   TY T+L GL + KR  +   L  +MI  G   D     +++ G  +
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 556 NGDLKSAFR 564
           +  +  AF+
Sbjct: 632 SNCVDEAFK 640



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 243/514 (47%), Gaps = 39/514 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + + ++NG   +G+ D  +  + EM+  G+  DVVTY  +ID  C      +A  +
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +MID G +P    Y  LIHG  +  K  E   M   M   G+ P+ YTY +L++  CK
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A  F+  M+   ++P V T+G+L+ G    G L    +F   M + G+ P+  +
Sbjct: 317 NGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N     + K G + +AM + ++M +  +SP+V  Y  LI  LC +G+++ AE    +M 
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS------------ 369
            EG+  N+V +NSL+ G C     E+A  +  +M ++G+ PN V F++            
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496

Query: 370 -----------------------LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
                                  LI G C  G  D A  ++  MV   L P  V +  L+
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G      + +   L++EML   +TP V T ++++HGLF+  R S A   +L   +   G
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS--G 614

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C  +   Y  I+  LC    + +A K+F  + S  L+ +  T+T M+  LL+  R  D
Sbjct: 615 TKC--DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 672

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            M L A +   G+VP+ V  +++     E G L+
Sbjct: 673 AMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 706



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 236/509 (46%), Gaps = 11/509 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEE---ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-F 106
           N   +S LI  F  MGH+E    A  +  K        A N LL GL    +     +  
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID---KGIEPTVVIYTILIHG 163
            + M   G + D V+Y +L+   C +    +AL L   M D   +   P VV Y+I+I+G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
              E ++ +  ++F  M + G+ P++ TY  ++DG CK    +RA   + +M+ +  +PN
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+  L+ G   +G+ +        M+  G+ P+ + Y  L++  CK G   EA     
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M +  I P V TY ILI G    G L      L  M + G+  +   +N     Y K G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++KA+ + ++M + G+ PNVV + +LID  CK G +D A   + +M+ + + P++VVF 
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L+ GL      +    L  EML+  I P+    ++LI  L   GR+           D 
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI----DL 504

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            +     P+   Y  +I   C  G+  +A K+F  M S  L P   TY T+L G   A R
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           + D   L  +M++ G+ P  V    ++ G
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHG 593



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 191/427 (44%), Gaps = 18/427 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGL----CNENKMVEAESMFRSMRECG--VVPNLYT 191
           AL LFDE++      +V  +  L+  +    C+    +      R +REC   V PNL T
Sbjct: 33  ALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCT 92

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRAAGNFFV 248
           Y+ L+  +C++  +      +  +L    + + +    L+ GLC   +VGE  A      
Sbjct: 93  YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGE--AMDVLLQ 150

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM---EKFEISPDVFTYNILIKGLC 305
            M + G  P+   Y  L+ G C      EA+ L   M         P+V +Y+I+I G  
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFF 210

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             GQ++    L  +M   GI  +VVTY ++IDG CK    ++A  V  QM + G +PN  
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ LI G    G     + +  EM  + L PD   + +L++ L K+G  +E    +  M
Sbjct: 271 TYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM 330

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   I P V T   LIHG    G +S   +F     D       SP+H ++     A   
Sbjct: 331 IRKGIKPKVSTYGILIHGYATKGALSEMHSFL----DLMVENGLSPDHHIFNIFFSAYAK 386

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G I KA  +F+ MR   L P+   Y  ++  L +  R+ D  +    MI  G+ P+ V+
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 546 NQVMVRG 552
              +V G
Sbjct: 447 FNSLVYG 453



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 185/391 (47%), Gaps = 3/391 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+    A+++ G I++A+ ++ K+    + P +    AL++ L K G+ D     + +M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  ++V +  L+   C      +A  L  EM+D+GI P  V +  LI  LCN  ++
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           +E   +   M   GV P+ ++Y  L+ GYC     + A + +  M+   L P  VT+  L
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C    +  A   F  M + GV P +  YN ++ G  +     EA  L   M     
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D++TYNI++ GLC    ++ A  + Q +  +G+  N++T+  +I    K G  E A+ 
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + +   G+ PNVVT+  + +   + G+++    L++ M      P+  +  AL+  L 
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             G++        ++ E   +    T S L+
Sbjct: 736 HRGDISRAGAYLSKLDERNFSVEASTTSLLM 766



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 171/368 (46%), Gaps = 14/368 (3%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGL----CKVGELRAAGNF--FVHMAKFGVFPN 258
           ++ AL+ + E+LHH    +V  F  L+  +    C      A  +F   V      V PN
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL-EGAEGLL 317
           +  Y+ LI   C+ G+L    +    + K     D    N L+KGLC   ++ E  + LL
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE---KGVEPNVVTFSSLIDGQ 374
           Q+M + G + + V+Y  L+ G C E   E+AL +   M +   +   PNVV++S +I+G 
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
              G +D    L+ EM+ + + PDVV +T +IDGL K         ++++M++    P+ 
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +T + LIHG    G+    +    E + +       P+   Y +++  LC +G+  +A  
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARG----LKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F  M    ++P   TY  ++ G      + ++   L  M++ G+ PD  I  +    Y 
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 555 ENGDLKSA 562
           + G +  A
Sbjct: 386 KCGMIDKA 393



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 3/273 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI     +G + E   +   +E   V P   +   L++G    G+ D   + +
Sbjct: 478 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF 537

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + MV  GL    VTY  L+   C    +  A  LF EM+ KG+ P VV Y  ++HGL   
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA+ ++ +M   G   ++YTYN +++G CK   V+ A + +  +    LQ N++TF
Sbjct: 598 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +++  L K G    A + F  +   G+ PN+  Y  + +   + G+L E  SL S MEK
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
              +P+    N L++ L   G +  A   L K+
Sbjct: 718 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 11/289 (3%)

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCK---EGDMEKALSVCSQMTEK---GVEPN 363
           L+ A  L  ++      A+V  +N L+    +       E A+S  ++M  +    V PN
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR-LY 422
           + T+S LI   C+ G+++     +  ++      D +    L+ GL     + E +  L 
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           + M E    P   + + L+ GL    R   AL       D   G  C PN V Y+ +I  
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD-HGRRCPPNVVSYSIVING 208

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
              +GQ+ K   LF +M    + PD  TYTT++ GL +A+       +   MI  G  P+
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
                 ++ GY   G  K      + L+E      + + +T  S L +L
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVV---QMLEEMSARGLKPDCYTYGSLLNYL 314


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 271/523 (51%), Gaps = 14/523 (2%)

Query: 43  NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF-D 101
           NS      N  V+  L  A+S    + +AL+V  K++VL  +Q   A  N L+   +  D
Sbjct: 159 NSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVL-NLQVSIATYNSLLYNLRHTD 217

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
            +W+ Y E+   G+  +  T  +LID  C Q  +  A+    E   +   P+VV +  L+
Sbjct: 218 IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALM 277

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    +  A+S F  M + G++P++Y+YN L+ G C    +  ALEF ++M +H ++
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE 337

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++VT+ +L +G   +G +  A      M   G+ P++  Y  LI GHC+ GN+ E+  L
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M    +   + TY +L+  LC  G+++ A  LL +M   G+  +++TY+        
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS-------- 449

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A+ +  +M  K + PN    S++I G  + G I  A   +  +    +  ++++
Sbjct: 450 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 509

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +IDG +K GN+ E +R YK+++E  I+P++ T +SLI+G  K G+++ A+   L  T
Sbjct: 510 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK--LLDT 567

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K  G    P  V Y  ++   C +G +     +  +M +  ++P   TYT +++GL + 
Sbjct: 568 IKVHG--LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 625

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            R+ + + LL  M   G+ PD +    +++ + +  DL+ AF+
Sbjct: 626 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 251/517 (48%), Gaps = 17/517 (3%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P V+S   L+      G +EEAL     +E   V P I   N L NG    G     W+ 
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + M+L GL  D+VTY +LI   C  G++ ++  L ++M+ +G++ ++V YT+L+  LC 
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA  +   M   G+ P+L TY+           V  A+E Y EM    + PN   
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFV 474

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              ++ GL + G +  A  +F  + K  V   I +YN +IDG+ K GN+ EA+    ++ 
Sbjct: 475 CSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 534

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  ISP + T+N LI G C  G+L  A  LL  +   G++   VTY +L++GYC+EGDM 
Sbjct: 535 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 594

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               +  +M  K ++P  +T++ ++ G CK G +  ++ L   M  + L PD + +  +I
Sbjct: 595 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 654

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
               K  ++++  +L+ +ML+  + PS  T + LI+GL   G + +A    +   D++  
Sbjct: 655 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS-- 712

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                  V Y  II+A C  G +  A   F  M           Y+ ++  L +   + D
Sbjct: 713 --IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITD 770

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
                  M+  GI PD  I  VM+  +  +GD  S F
Sbjct: 771 AKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 807



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 211/394 (53%), Gaps = 9/394 (2%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKG 98
           L+ +E+    P      ++ +S  G +EEA+ +Y ++    + P    C+A+++GL +KG
Sbjct: 433 LHEMEVIGLKPD-----LLTYSR-GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKG 486

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
                  +++ +    +  +++ Y ++ID     G++ +A+  + ++I+KGI PT+V + 
Sbjct: 487 AISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFN 546

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LI+G C + K+ EA  +  +++  G+VP   TY  LM+GYC+  D++   +  HEM   
Sbjct: 547 SLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 606

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            ++P  +T+ V++ GLCK G L  +     +M   G+FP+   YN +I   CKA +L +A
Sbjct: 607 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 666

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             L ++M +  + P   TYN+LI GLC  G L+ A+ LL  +  + I    V Y ++I  
Sbjct: 667 FQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 726

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C +GD++ AL    QM E+G E ++  +S++I+  CK   I  A   +  M+   + PD
Sbjct: 727 HCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 786

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             +   +++   + G+      ++  M++  + P
Sbjct: 787 QDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 216/413 (52%), Gaps = 13/413 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            NP +  ++ LI    +MG+IEE+  +  K+    +  +I     LL+ L K G+ D   
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               EM + GL  D++TY         +G V +A+ L++EM  K I P   + + +I GL
Sbjct: 431 ILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             +  + EA+  F S+ +  V   +  YN ++DGY K+ ++  A+  Y +++   + P +
Sbjct: 483 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 542

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VTF  L+ G CK G+L  A      +   G+ P    Y  L++G+C+ G++     +  E
Sbjct: 543 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 602

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME   I P   TY +++KGLC  G+L  +  LL+ MY  G+  + +TYN++I  +CK  D
Sbjct: 603 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 662

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++KA  + +QM +  ++P+ VT++ LI+G C  GN+  A  L   +  +S+    V +T 
Sbjct: 663 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTT 722

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +I      G+++  L  + +M+E     S+   S++I+ L K   I++A  FF
Sbjct: 723 IIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 229/430 (53%), Gaps = 7/430 (1%)

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           + +IE+AL+ +  +     LP I   + LL+ L++   + +V    + + L  +  DV  
Sbjct: 62  LTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH 121

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           + +LI+C      V  A ++  ++I  G EP  V ++ LI+GLC E+K   A   F  M 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G  PNL+TYN ++ G+CK+     A+    +M     +P++V +  ++DGLCK   + 
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A + F  +   GV P++F Y+ L+ G C +    EA +L +EM    I PDV T+NIL+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC  G L  A+G+++ M ++G+  N  TYNSL++GYC +  + +A  V   M  KG  
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNVV+++ LI+G CKA  ID A  L+ EM  + L+P+   +  LI GL + G   E   L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +K+M     +P + T + L+  L K G + NAL  F    D        PN V Y  +I+
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSC----LKPNLVTYDILIR 477

Query: 482 ALCYDGQILK 491
           A+   G+I +
Sbjct: 478 AMYKSGKIYR 487



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 200/408 (49%), Gaps = 4/408 (0%)

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+   + +A   F  M     +P +  ++ L+    ++      L     +    ++ +V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             F +L++   ++  +  A +    + K G  P+   ++ LI+G C       AM    E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M      P++ TYN +IKG C +G+   A GLL+KM K G   ++V YN++IDG CK+  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +AL + S++  KGV P+V T+S L+ G C +   + A  L+ EM+  +++PDVV F  
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+D L K+G + E   + K M+E  + P+  T +SL++G     ++  A   F    D  
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF----DAM 355

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C PN V Y  +I   C   +I +A +LF +M    L P+   Y T++ GL +A R 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +   L  DM   G  PD V   +++    + G L +A R    +++S
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS 463



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 4/430 (0%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C   ++  AL  F+ MI K   P +V +  L+  L          S+ + +    +  ++
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + +N L++ + ++  V+ A     +++    +P+ VTF  L++GLC   +   A  FF  
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G  PN+  YN +I G CK G    A+ L  +M+K    PD+  YN +I GLC    
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A  +  ++  +G+  +V TY+ L+ G C     E+A ++ ++M    + P+VVTF+ 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+D  CK G +  A G+   M+ K + P+   + +L++G      + E   ++  M+   
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+V + + LI+G  K  RI  A   F E + +       PN   Y  +I  LC  G+ 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG----LIPNTFNYNTLISGLCQAGRH 415

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +LF DM++    PD  T T +L  L +   + + + L   M    + P+ V   ++
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 550 VRGYQENGDL 559
           +R   ++G +
Sbjct: 476 IRAMYKSGKI 485


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 265/526 (50%), Gaps = 8/526 (1%)

Query: 67  HIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-GLVADVVTY 122
           +I+EAL +++    ++ LP+++    LL  +++   + +     + +    G+ AD +T 
Sbjct: 56  NIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITL 115

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            ++I+C C    V    ++   M   G+EPTV+  T LI+GLC +  + +A  +   M +
Sbjct: 116 NIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEK 175

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
                ++YTY  L++G CK  D   A+E+  +M   N +PNVV +  +MDGLCK G +  
Sbjct: 176 MRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSE 235

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A N    M+  GV PN+  Y CLI G C  G   E  SL  EM K  +  D+ T NIL+ 
Sbjct: 236 ALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVD 295

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
             C  G++  A+ ++  M   G   +V TYNSLI  YC +  M +A+ V   M  +G  P
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLP 355

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           ++V F+SLI G CK  NI+  M L  EM     VPDVV +T LI G  + G       L+
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M +    P++ T + ++ GL K   +S A++   E  +K++      N V+Y+ ++  
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVS-LAEAMEKSN---LDLNIVIYSILLDG 471

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +C  G++  A +LFS +    L+ +  TYT M++GL +   +     LL +M + G +PD
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPD 531

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
                V V+G     ++  + +    +++            T ++L
Sbjct: 532 NCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYL 577



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 185/367 (50%), Gaps = 3/367 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+ST++    + G + EAL +  ++    V P +     L+ GL   G++     
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGS 273

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G+  D+ T  +L+D  C +G VM+A ++   MI  G  P V  Y  LIH  C
Sbjct: 274 LLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +NKM EA  +F  M   G +P++  + +L+ G+CK  ++N+ +    EM      P+VV
Sbjct: 334 LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVV 393

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G C+ G   AA   F++M K+G  PN+     ++DG CK   L EA+SL   M
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAM 453

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK  +  ++  Y+IL+ G+C  G+L  A  L   +  +G+  NV TY  +I G CK+G +
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSL 513

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KA  +   M E G  P+  T++  + G      I  ++   T M  K    D       
Sbjct: 514 DKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEIT 573

Query: 406 IDGLSKD 412
           I+ LS +
Sbjct: 574 INYLSTN 580



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 204/462 (44%), Gaps = 40/462 (8%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNG 93
           F+ L ++      P+V   + LI      G++ +A+ +   +E +     +     L+NG
Sbjct: 132 FSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLING 191

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K G   +  E+  +M       +VV Y  ++D  C  G V +ALNL  EM  KG+ P 
Sbjct: 192 LCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPN 251

Query: 154 VVIYTILIHGLCN-----------------------------------ENKMVEAESMFR 178
           +V Y  LI GLCN                                   E K+++A+S+  
Sbjct: 252 LVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIG 311

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  P+++TYN+L+  YC    +N A+  +H M+     P++V F  L+ G CK  
Sbjct: 312 FMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDK 371

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +    +    MAK G  P++  +  LI G C+AG    A  L   M K+   P++ T  
Sbjct: 372 NINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCA 431

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +++ GLC    L  A  L + M K  +  N+V Y+ L+DG C  G +  A  + S +  K
Sbjct: 432 VILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G++ NV T++ +I G CK G++D A  L   M     +PD   +   + GL     +  +
Sbjct: 492 GLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARS 551

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++    M +   +    T    I+ L  N   +    FF  K
Sbjct: 552 IKYLTIMRDKGFSVDAATTEITINYLSTNEGDTRIREFFFPK 593


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 251/493 (50%), Gaps = 8/493 (1%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P+ + T++      GH   A  ++ ++   +V P +   N +L+ L +KG          
Sbjct: 176 PAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLA 235

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +++  G+ A+  T  + I   C  G + +A+ L + M    + P VV Y  L+ GLC ++
Sbjct: 236 KVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDS 294

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ EA      M   G +P+ +TYN ++DGYCK   +  A E   + +     P+ VT+ 
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L++GLC  G++  A   F       + P++ VYN L+ G C+ G +  A+ + +EM + 
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD++TYNI+I GLC +G +  A  ++     +G L +V T+N+LIDGYCK   ++ A
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSA 474

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +  +M   G+ P+V+T++S+++G CKAG        + EM++K   P+ + +  LI+ 
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K   ++E   +   M +  + P   + ++LIHG  +NG +  A   F +  +K   GY
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK---GY 591

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            S     +  +I A      +  A K+F +M S   +PD  TY  ++ GL +A  +    
Sbjct: 592 -SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650

Query: 529 MLLADMIKMGIVP 541
             LA+MI  G VP
Sbjct: 651 AHLAEMISKGFVP 663



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 273/586 (46%), Gaps = 48/586 (8%)

Query: 15  RCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWV 74
           R LI++    L+ + +   V  ++ +A + L      P ++   I A++  G +  A+  
Sbjct: 39  RALIRE----LVSAGRLDDVDAALASARSHLAPDSLQP-LYVASIQAYARAGRLRAAVDA 93

Query: 75  YRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC- 130
           + ++++    PA  A NA+++ L+     D   + Y  M+  G+  D  T+ V +   C 
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 131 ----------------------------------GQGDVMKALNLFDEMIDKGIEPTVVI 156
                                               G    A +LFDEM+ + + P V  
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  ++H LC +  ++E+ ++   + + G+  N +T N  + G C+   +  A+     M 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + + P+VVT+  LM GLCK  +++ A  +   M   G  P+ F YN +IDG+CK+G L 
Sbjct: 274 AY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA  L  +       PD  TY  LI GLC  G +E A  L  +   + +  ++V YNSL+
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G C++G +  AL V ++M E+G  P++ T++ +I+G CK GNI  A  +  + ++K  +
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDV  F  LIDG  K   +   L+L + M    I P V T +S+++GL K G+       
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E   K     C PN + Y  +I+  C   Q+ +AS +   M  D L PD  ++ T++ 
Sbjct: 513 FEEMILKG----CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           G  R   +    +L   + + G    A    +++  Y    +++ A
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 614



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 200/367 (54%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +++G  K G      E  ++ V  G V D VTY  LI+  C +GD+ +AL LF+E   
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K ++P +V+Y  L+ GLC +  ++ A  +   M E G  P+++TYN +++G CK+ +++ 
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A    ++ +     P+V TF  L+DG CK  +L +A      M  +G+ P++  YN +++
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG   E      EM      P+  TYNILI+  C + QLE A G++ +M ++G++ 
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + V++N+LI G+C+ GD++ A  +  ++ EKG      TF+ LI       N+  A  ++
Sbjct: 559 DAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIF 618

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+ K   PD+  +  L+DGL K  N+        EM+     PS+ T   +++ L  N
Sbjct: 619 GEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMN 678

Query: 448 GRISNAL 454
            R+S A+
Sbjct: 679 HRVSEAV 685



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 213/414 (51%), Gaps = 17/414 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++T+I  + + G ++EA  + +    K  V   +  C +L+NGL  +G  +   E + E
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC-SLINGLCAEGDIERALELFNE 375

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
                L  D+V Y  L+   C QG ++ AL + +EM+++G  P +  Y I+I+GLC    
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +       G +P+++T+N L+DGYCK   ++ AL+    M  + + P+V+T+  
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++GLCK G+ +     F  M   G  PN   YN LI+  CK   L EA  +   M +  
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD  ++N LI G C  G L+GA  L QK+ ++G  A   T+N LI  Y  + +M+ A 
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  KG +P++ T+  L+DG CKA N+D A     EM+ K  VP +  F  +++ L
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLL 675

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVF-TVSS-----------LIHGLFKNGRIS 451
           + +  + E + +   M+   + P V  T+ S           L+  L K G IS
Sbjct: 676 AMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHIS 729



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 246/555 (44%), Gaps = 68/555 (12%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT--YGVLIDCCCGQGDVMKALNL 141
           I A  AL+  L+  G+ D V +         L  D +   Y   I      G +  A++ 
Sbjct: 35  IPAYRALIRELVSAGRLDDV-DAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F+ M      P    Y  ++  L N     +A  ++  M   GV P+  T+   +  +C 
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + AL     +           +  ++ GL   G    A + F  M    VFP++  
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ--- 318
           +N ++   C+ G++ E+ +L +++ K  +S + FT NI I+GLC  G+LE A  L++   
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 319 -------------------------------KMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                                          +M  +G + +  TYN++IDGYCK G +++
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +      KG  P+ VT+ SLI+G C  G+I+ A+ L+ E   K L PD+VV+ +L+ 
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKT 464
           GL + G +   L++  EM+E    P ++T + +I+GL K G IS+A   +N  + K    
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453

Query: 465 D--------GGYC--------------------SPNHVLYAAIIQALCYDGQILKASKLF 496
           D         GYC                    +P+ + Y +++  LC  G+  + ++ F
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M     RP+  TY  ++    +  ++ +   ++  M + G+VPDAV    ++ G+  N
Sbjct: 514 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573

Query: 557 GDLKSAFRCSEFLKE 571
           GDL  A+   + L E
Sbjct: 574 GDLDGAYLLFQKLDE 588


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 278/565 (49%), Gaps = 43/565 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQAC-NALLNGLIKKGKFDSVWEFYEE 109
           +FS  + A  +M  +  AL + R++     +PA Q    +++   +K+G  +   +  +E
Sbjct: 276 LFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDE 335

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+   V+    LI   C   ++ KAL+ F+ M ++G+ P  V+++++I   C   +
Sbjct: 336 MVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNME 395

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDG------------------------------- 198
           M +A  +++ M+  G+ P+    + ++ G                               
Sbjct: 396 MEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKI 455

Query: 199 ---YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
               CK   V+ A  F   M +  ++PNVV +  +M   C++  +  A + F  M + G+
Sbjct: 456 FLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN F Y+ LIDG  K  +   A  + ++M       +   YN +I GLC VGQ   A+ 
Sbjct: 516 QPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKE 575

Query: 316 LLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           +LQ + KE   +    +YNS+IDG+ KEGD + A+    +M+E G+ PNVVTF+SLI+G 
Sbjct: 576 MLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGF 635

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+  +D A+ +  EM  K L  DV  + ALIDG  K  +MK    L+ E+LE  + P+V
Sbjct: 636 CKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNV 695

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              ++LI G    G++  A++ +  K    DG  C  +   Y  +I  L  DG ++ AS 
Sbjct: 696 SVYNNLISGFRNLGKMDAAIDLY--KKMVNDGISC--DLFTYTTMIDGLLKDGNLILASD 751

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+S++ +  + PD   Y  ++ GL +  + +    +L +M K    P+ +I   ++ G+ 
Sbjct: 752 LYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHH 811

Query: 555 ENGDLKSAFRCSEFLKESRIGSSET 579
             G+L  AFR  + + E  +   +T
Sbjct: 812 REGNLNEAFRVHDEMLEKGLVHDDT 836



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 266/624 (42%), Gaps = 113/624 (18%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P +   N +L+ L++    D   E Y +MVL G+  D VT  +L+     +    +A+
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAM 259

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP------------ 187
            +F  ++ +G EP  +++++ +   C    +V A  + R MRE G VP            
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVA 319

Query: 188 ------------------------NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                                   ++    +L+ G+C   ++ +AL+F++ M    L P+
Sbjct: 320 CVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPD 379

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG--------------- 268
            V F V+++  CK  E+  A   +  M   G+ P+  + + +I G               
Sbjct: 380 KVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439

Query: 269 --------H-----------CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
                   H           CK G +  A S    ME   I P+V  YN ++   C +  
Sbjct: 440 DSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKN 499

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  +  +M ++G+  N  TY+ LIDG+ K  D + A  V +QM     E N V +++
Sbjct: 500 MDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNT 559

Query: 370 LIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +I+G CK G    A  +   ++  K        + ++IDG  K+G+    +  Y+EM E 
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSEN 619

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTDKTD--------GGYCS------- 470
            I+P+V T +SLI+G  K+ R+  AL    E   K  K D         G+C        
Sbjct: 620 GISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTA 679

Query: 471 -------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                        PN  +Y  +I      G++  A  L+  M +D +  D  TYTTM+ G
Sbjct: 680 YTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE------ 571
           LL+   ++    L ++++ +GIVPD ++  V+V G  + G    A +  E +K+      
Sbjct: 740 LLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPN 799

Query: 572 -----SRIGSSETEGHTTRSFLGH 590
                + I     EG+   +F  H
Sbjct: 800 VLIYSTVIAGHHREGNLNEAFRVH 823



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 211/418 (50%), Gaps = 7/418 (1%)

Query: 14  ARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALW 73
           +  L+  + +  LK+  P      +FN  +S E    +  + + + +   + G ++ A  
Sbjct: 414 SSVLVHKMIQGCLKAESPE-AALEIFN--DSFETWIAHGFMCNKIFLLLCKQGKVDAATS 470

Query: 74  VYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
             R +E   + P +   N ++    +    D     + EM+  GL  +  TY +LID   
Sbjct: 471 FLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFF 530

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNL 189
              D   A  + ++MI    E   VIY  +I+GLC   +  +A+ M +++ +E       
Sbjct: 531 KNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGC 590

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +YN+++DG+ K  D + A+E Y EM  + + PNVVTF  L++G CK   +  A      
Sbjct: 591 TSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHE 650

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M    +  ++  Y  LIDG CK  ++  A +L SE+ +  + P+V  YN LI G   +G+
Sbjct: 651 MKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGK 710

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  L +KM  +GI  ++ TY ++IDG  K+G++  A  + S++   G+ P+ + +  
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVV 770

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           L++G  K G    A  +  EM  K   P+V++++ +I G  ++GN+ E  R++ EMLE
Sbjct: 771 LVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLE 828



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 165/320 (51%), Gaps = 1/320 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DK 148
           L++G  K     + WE   +M+     A+ V Y  +I+  C  G   KA  +   +I +K
Sbjct: 525 LIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
                   Y  +I G   E     A   +R M E G+ PN+ T+ +L++G+CK   ++ A
Sbjct: 585 RYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLA 644

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           LE  HEM   +L+ +V  +G L+DG CK  +++ A   F  + + G+ PN+ VYN LI G
Sbjct: 645 LEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISG 704

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
               G +  A+ L  +M    IS D+FTY  +I GL   G L  A  L  ++   GI+ +
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPD 764

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            + Y  L++G  K+G   +A  +  +M +K   PNV+ +S++I G  + GN++ A  ++ 
Sbjct: 765 EILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHD 824

Query: 389 EMVIKSLVPDVVVFTALIDG 408
           EM+ K LV D  +F  L+ G
Sbjct: 825 EMLEKGLVHDDTIFNLLVSG 844



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 153/290 (52%), Gaps = 1/290 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           N ++NGL K G+     E  + ++     +    +Y  +ID    +GD   A+  + EM 
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMS 617

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           + GI P VV +T LI+G C  N+M  A  M   M+   +  ++  Y AL+DG+CK  D+ 
Sbjct: 618 ENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMK 677

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + E+L   L PNV  +  L+ G   +G++ AA + +  M   G+  ++F Y  +I
Sbjct: 678 TAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG  K GNL  A  L SE+    I PD   Y +L+ GL   GQ   A  +L++M K+   
Sbjct: 738 DGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDAT 797

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            NV+ Y+++I G+ +EG++ +A  V  +M EKG+  +   F+ L+ G+ +
Sbjct: 798 PNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 10/376 (2%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            +N L++ Y +   ++ A++ ++ M+  N+ P V     ++  L +   +  A   +  M
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              GV  +      L+    +     EAM +   +      PD   +++ ++  C +  L
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 311 EGAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
             A  LL++M  K G+ A+  TY S+I    KEG+ME+A+ V  +M   G+  +V+  +S
Sbjct: 291 VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATS 350

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G C    +  A+  +  M  + L PD V+F+ +I+   K+  M++ + +YK M    
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           I PS   V  +I G  K      AL  F +  +T    G  C+        I   LC  G
Sbjct: 411 IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCN-------KIFLLLCKQG 463

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++  A+     M +  + P+   Y  M+    R K M     + ++M++ G+ P+     
Sbjct: 464 KVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYS 523

Query: 548 VMVRGYQENGDLKSAF 563
           +++ G+ +N D ++A+
Sbjct: 524 ILIDGFFKNQDEQNAW 539



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 133/597 (22%), Positives = 231/597 (38%), Gaps = 86/597 (14%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEM-GHIEEA----LWVYRKIEVLPAIQACNAL- 90
           S     + LE P        + +I+ SE   H+++A    + + R+ + + A+Q CN + 
Sbjct: 45  STTEVFSELEFPHKASGPNHSPLISTSETDNHVDDAHVIEVLLGRRNDPVSALQYCNWVK 104

Query: 91  -LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL--NLFDEMID 147
            L  L + G  D  W     +       D  +  +++        +  A+  NL D    
Sbjct: 105 PLRSLCEGG--DVFWVLIHILFSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSSKR 162

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
              E +   +  L++      +M  A   F  M +  VVP +   N ++    +   ++ 
Sbjct: 163 FDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDE 222

Query: 208 ALEFYHEM-----------------------------------LHHNLQPNVVTFGVLMD 232
           A E Y++M                                   +    +P+ + F + + 
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQ 282

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFP-NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             CK+ +L  A +    M + G  P +   Y  +I    K GN+ EA+ +  EM  F I 
Sbjct: 283 AACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIP 342

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
             V     LI G C   +L  A     +M +EG+  + V ++ +I+ +CK  +MEKA+ +
Sbjct: 343 MSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEI 402

Query: 352 CSQMTEKGVEPNVVTFSSLIDG----------------------------------QCKA 377
             +M   G+ P+ V    +I G                                   CK 
Sbjct: 403 YKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQ 462

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +DAA      M  K + P+VV +  ++    +  NM     ++ EMLE  + P+ FT 
Sbjct: 463 GKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTY 522

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S LI G FKN    NA     E  ++        N V+Y  II  LC  GQ  KA ++  
Sbjct: 523 SILIDGFFKNQDEQNA----WEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 498 DMRSDNLRPDNCT-YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++  +      CT Y +++ G  +       +    +M + GI P+ V    ++ G+
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGF 635



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/252 (19%), Positives = 108/252 (42%), Gaps = 3/252 (1%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            +N L++ Y +   M+ A+   + M ++ V P V   ++++    ++  ID A  +Y +M
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V+  +  D V    L+    ++   +E +++++ ++     P     S  +    K   +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             AL+   E  +K   G    +   Y ++I A   +G + +A K+  +M    +      
Sbjct: 291 VMALDLLREMREK---GGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIA 347

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            T+++ G      +   +     M + G+ PD V+  VM+  + +N +++ A    + +K
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMK 407

Query: 571 ESRIGSSETEGH 582
              I  S    H
Sbjct: 408 SVGIAPSSVLVH 419


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 260/519 (50%), Gaps = 15/519 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I    +   ++ A  V++ +    V P       L++G +  GK+  V +  
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQML 260

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   GL  D V Y VL+D  C  G   +A N+FD +I KGI+P V IY IL+HG   E
Sbjct: 261 QEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATE 320

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + E  S    M   GV P+ + +N + + Y K A ++ A+  + +M    L P VV +
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+D LCK+G +  A   F  M   GV P+IFV++ L+ G C      +A  L  E+  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  +   +NIL+  LC  G++  A+ L+  M +  +  +V++YN+L+DG+C  G +++
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDE 500

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M   G++P+  T+++L+ G CKA  ID A  L+ EM++K L P VV +  ++ 
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL + G   E   LY  M+  +    ++T + +++GL +N  +  A   F          
Sbjct: 561 GLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMF--------QS 612

Query: 468 YCSPNHVL----YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            CS +  L       +I AL   G+   A  LF+ + +  L PD  TY  +   L++   
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + ++  L + M + G  P++ +   +VR     GD+  A
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 239/538 (44%), Gaps = 14/538 (2%)

Query: 37  SVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNAL 90
           S+FN +      K  PS   ++ LI  F  MG ++     +  I      L        L
Sbjct: 75  SLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQL 134

Query: 91  LNGLIKKGKFDSVWE-FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L GL    + D   +     M   G   +V++Y +L+   C +    +AL L   M D G
Sbjct: 135 LKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDG 194

Query: 150 I---EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
                P VV YT +I GLC    +  A+ +F+ M + GV PN +TY  L+ GY       
Sbjct: 195 DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWK 254

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
             ++   EM  H LQP+ V + VL+D LCK G    A N F  + + G+ P++ +Y  L+
Sbjct: 255 EVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILL 314

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+   G L E  S    M +  +SPD   +NI+         ++ A  +  KM ++ + 
Sbjct: 315 HGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLS 374

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             VV Y +LID  CK G ++ A+   +QM  +GV P++  FSSL+ G C     + A  L
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKL 434

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + E++ + +  +   F  L+  L ++G + E  RL   ML   + P V + ++L+ G   
Sbjct: 435 FFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCL 494

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GRI  A        D        P+   Y  ++   C   +I  A  LF +M    L P
Sbjct: 495 TGRIDEAAKLL----DVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              TY T+L GL +  R  +   L  +MI      D     +++ G   N  +  AF+
Sbjct: 551 GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFK 608



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 215/464 (46%), Gaps = 25/464 (5%)

Query: 1   IFYVLANAKLYKNARCL-IKDVTENLL-KSRKPHHVCYSVF-------NALNSLEIPKF- 50
           + Y +    L KN RC   +++ ++L+ K  KPH   Y +         AL+  E+  F 
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS--EMHSFL 330

Query: 51  ----------NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKK 97
                     +  +F+ +  A+++   I+EA+ ++ K+    + P +    AL++ L K 
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+ D     + +M+  G+  D+  +  L+   C      KA  LF E++D+GI      +
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            IL+  LC E +++EA+ +   M    V P++ +YN L+DG+C    ++ A +    M+ 
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L+P+  T+  L+ G CK   +  A + F  M   G+ P +  YN ++ G  + G   E
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L   M       D++TY I++ GLC    ++ A  + Q +  + +  ++ T N +I 
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
              K G  E A+ + + ++  G+ P+V T+  + +   K G+++    L++ M      P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           +  +  AL+  L   G++        ++ E   +    T S LI
Sbjct: 691 NSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 11/300 (3%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + N + F+ L+      G + EA   + +  +++V P + + N L++G    G+ D   +
Sbjct: 444 RLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + MV  GL  D  TY  L+   C    +  A +LF EM+ KG+ P VV Y  ++HGL 
Sbjct: 504 LLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLF 563

Query: 166 NENKMVEAESMFRSM----RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
              +  EA+ ++ +M    R+C    ++YTY  +++G C+   V+ A + +  +   +LQ
Sbjct: 564 QIGRFCEAKELYLNMINNRRKC----DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQ 619

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            ++ T  +++  L K G    A + F  ++ +G+ P++  Y  + +   K G+L E   L
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            S ME+   +P+    N L++ L   G +  A   L K+ ++       T + LI  Y +
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 9/289 (3%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEK 347
           +++P   TY ILI   C +G+L+        + K G  L N V +  L+ G C    +++
Sbjct: 87  KVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDE 146

Query: 348 ALSVC-SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK---SLVPDVVVFT 403
           A  +   +M E G   NV++++ L+ G C     + A+ L   M      S  P+VV +T
Sbjct: 147 ATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYT 206

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDGL K   +     +++ M++  + P+  T + LIHG    G+    +    E +  
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS-- 264

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
           T G    P+ V+YA ++  LC +G+  +A  +F  +    ++P    Y  +L G      
Sbjct: 265 THG--LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           + ++   L  M++ G+ PD  I  +M   Y +   +  A    + +++ 
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 281/591 (47%), Gaps = 74/591 (12%)

Query: 46  EIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
           EI    P++  ++TLI A+ +   +EE+  +Y+K+    ++P +  C+++L G  + GK 
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
                 + EM   GL  + V+Y  +I+     G VM+A NL  +M+ +GI   +V  T +
Sbjct: 373 TEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           + GL    K  EAE +F ++ +  + PN  TY+AL+DGYCK+  +  A     +M   ++
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PNV+TF  +++G  K G L  A +    M +  V PN  VY  LIDG+ KAG    A  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
            C EM+   +      ++IL+  L  VG+++ A  L+  MY +GI  ++V Y SLIDGY 
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYF 612

Query: 341 KEGDMEKALS----------------------------------VCSQMTEKGVEPNVVT 366
           KEG+   ALS                                  VCS+M E G+ P+ +T
Sbjct: 613 KEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCIT 672

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++++I+  C  G  + A+ +  EM    ++P+ V +  LI GL K G +++      EML
Sbjct: 673 YNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 732

Query: 427 EAKITPSVFTVSSLIHGLFKNGR-----------ISNALNFFLEKTDKTDGGYC------ 469
             +  P+  T   L+    ++ +           +++ L   L   +     +C      
Sbjct: 733 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR 792

Query: 470 --------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                         S + V Y A+I+  C    + KA K +S M  D + P+  TY T+L
Sbjct: 793 KAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 852

Query: 516 RGL----LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            GL    L  + M +   L+++M + G+VP+A    ++V GY   G+ K  
Sbjct: 853 GGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKT 903



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 161/600 (26%), Positives = 267/600 (44%), Gaps = 80/600 (13%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWV-YRKIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+    + L+  +  +G ++ A WV Y  ++  V   +   N L++G  + G      E 
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATEL 254

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID------------------- 147
            E      +  D+VTY  L+   C  GD+ +A +LF+E++                    
Sbjct: 255 IENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI 314

Query: 148 KGIEPTVVIYTILI-----------------------------------HGLCNENKMVE 172
           K ++PT+V YT LI                                   +G C   K+ E
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +FR M E G+ PN  +Y  +++   K   V  A     +M+   +  ++VT   +MD
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GL KVG+ + A   F  + K  + PN   Y+ L+DG+CK G +  A  +  +MEK  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V T++ +I G    G L  A  +L++M +  ++ N + Y  LIDGY K G+ + A   C
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M  + +E + V F  L++   + G +D A  L  +M  K + PD+V + +LIDG  K+
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY-CS- 470
           GN    L + +EM E  I   V   ++LI GL + G              K D  Y CS 
Sbjct: 615 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG--------------KYDPRYVCSR 660

Query: 471 -------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+ + Y  II   C  G+   A  + ++M+S  + P+  TY  ++ GL +   
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           +      L +M+ M  VP  + ++ +V+ Y  +       +  E L  S +  S T  +T
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 262/542 (48%), Gaps = 28/542 (5%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+  F+  G + +   +Y  +    V+P + + N L++ L K G  D    +     
Sbjct: 97  WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND 156

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +  +  D VTY  +I   C +G V +   L  EM+ +G+    +   IL+ G C    + 
Sbjct: 157 VVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +  ++ + GV  ++   N L+DGYC+   +++A E        +++ ++VT+  L+
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 232 DGLCKVGELRAAGNFFVHMAKF-------------------GVFPNIFVYNCLIDGHCKA 272
              CK G+L  A + F  +  F                    + P +  Y  LI  +CK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + E+ SL  +M    I PDV T + ++ G C  G+L  A  L ++MY+ G+  N V+Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            ++I+   K G + +A ++ SQM  +G+  ++VT ++++DG  K G    A  ++  ++ 
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            +L P+ V ++AL+DG  K G M+    + ++M +  + P+V T SS+I+G  K G +S 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A++   E   +       PN ++YA +I      G+   A     +M+S  L   N  + 
Sbjct: 515 AVDVLREMVQRN----VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 570

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            +L  L R  RM +   L+ DM   GI PD V    ++ GY + G+  +A    + +KE 
Sbjct: 571 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630

Query: 573 RI 574
            I
Sbjct: 631 NI 632



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 249/508 (49%), Gaps = 8/508 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+  + ++G +E A  V +K+E   V P +   ++++NG  KKG      +  
Sbjct: 460 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 519

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV   ++ + + Y +LID     G+   A +   EM  + +E + VI+ IL++ L   
Sbjct: 520 REMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 579

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA S+   M   G+ P++  Y +L+DGY K  +   AL    EM   N++ +VV +
Sbjct: 580 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 639

Query: 228 GVLMDGLCKVGELRAAGNFFV--HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             L+ GL ++G+       +V   M + G+ P+   YN +I+ +C  G   +A+ + +EM
Sbjct: 640 NALIKGLLRLGKYDPR---YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           + + I P+  TYNILI GLC  G +E AE  L +M     +   +T+  L+  Y +    
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKA 756

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +K L +  ++   G+E ++  +++LI   C+ G    A  +  EMV + +  D+V + AL
Sbjct: 757 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 816

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I G     ++++ L+ Y +M    I P++ T ++L+ GL   G +   +    +   + +
Sbjct: 817 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 876

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN   Y  ++      G   K   L  +M +    P   TY  ++    ++ +M+
Sbjct: 877 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 936

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +   LL D++  G +P++    ++  G+
Sbjct: 937 EARELLNDLLTKGRIPNSFTYDILTCGW 964



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 217/437 (49%), Gaps = 30/437 (6%)

Query: 150 IEPT-----VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           I PT     V  +  LI      ++   A + F  MR  G+VP L  +N L+  +     
Sbjct: 50  IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V++    Y +ML   + P+V +  VL+  LCKVG+L  A  +  +     +  +   YN 
Sbjct: 110 VSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNT 167

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I G C+ G + +   L SEM K  +  D  T NIL+KG C +G ++ AE ++  +   G
Sbjct: 168 VIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGG 227

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +V+  N+LIDGYC+ G M +A  +        V+ ++VT+++L+   CK G++  A 
Sbjct: 228 VTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287

Query: 385 GLYTEMV-------------------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            L+ E++                   IK+L P +V +T LI    K   ++E+  LYK+M
Sbjct: 288 SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   I P V T SS+++G  ++G+++ A   F E  +        PNHV YA II +L  
Sbjct: 348 IMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG----LDPNHVSYATIINSLFK 403

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G++++A  L S M    +  D  T TT++ GL +  +  +   +   ++K+ + P+ V 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 546 NQVMVRGYQENGDLKSA 562
              ++ GY + G ++ A
Sbjct: 464 YSALLDGYCKLGKMELA 480



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 245/499 (49%), Gaps = 27/499 (5%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +F +    +  M   GLV  +  +  L+      G V +   ++ +M+  G+ P V    
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVP-NLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           +L+H LC   K+ + +     +R   VV  +  TYN ++ G+C+   V++      EM+ 
Sbjct: 134 VLVHSLC---KVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVK 190

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L  + +T  +L+ G C++G ++ A     ++   GV  ++   N LIDG+C+AG + +
Sbjct: 191 RGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQ 250

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM---YKE----------- 323
           A  L     + ++  D+ TYN L+K  C  G L  AE L  ++   +K+           
Sbjct: 251 ATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVT 310

Query: 324 -----GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                 +   +VTY +LI  YCK   +E++ S+  +M   G+ P+VVT SS++ G C+ G
Sbjct: 311 QNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHG 370

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  L+ EM    L P+ V +  +I+ L K G + E   L  +M+   I+  + T +
Sbjct: 371 KLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCT 430

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +++ GLFK G+   A   F E   K +    +PN V Y+A++   C  G++  A  +   
Sbjct: 431 TVMDGLFKVGKTKEAEEVF-ETILKLN---LAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M  +++ P+  T+++++ G  +   +   + +L +M++  ++P+ ++  +++ GY + G+
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 559 LKSAFRCSEFLKESRIGSS 577
              A    + +K  R+  S
Sbjct: 547 QDVADDFCKEMKSRRLEES 565



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 172/387 (44%), Gaps = 46/387 (11%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++LI  + + G+   AL + ++++   +   + A NAL+ GL++ GK+D  +     M+
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMI 662

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D +TY  +I+  C +G    AL++ +EM   GI P  V Y ILI GLC    + 
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722

Query: 172 EAESMFRSMRECGVVP-----------------------------------NLYTYNALM 196
           +AES    M     VP                                   +L  YN L+
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
             +C++    +A     EM+   +  ++VT+  L+ G C    +  A   +  M   G+ 
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 842

Query: 257 PNIFVYNCLIDGHCKAG----NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
           PNI  YN L+ G   AG     + E   L SEM +  + P+  TY+IL+ G   VG  + 
Sbjct: 843 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKK 902

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              L  +M  +G +  + TYN LI  Y K G M +A  + + +  KG  PN  T+  L  
Sbjct: 903 TIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 962

Query: 373 GQCKAG---NIDAAMGLYTEMVIKSLV 396
           G         ID ++    E+ +K L+
Sbjct: 963 GWLNLSYEPEIDRSLKRSYEIEVKKLL 989


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 215/399 (53%), Gaps = 5/399 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N    S LI  F  +G +  +  +  KI  L   P       L+ GL  KG+   +  F+
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +++V      + V+YG L++  C  G+   A+ L   + D+   P VV+Y+ +I GLC +
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  ++  M    + PN+ TYN L+  +C    +  A    HEM+  N+ P+V TF
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF 223

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+D LCK G  + A   F  M + GV PN++ YN +I+G CK   + EAM+L  EM  
Sbjct: 224 SILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 281

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD  TYN LI GLC  G++  A  L+ +M+  G  A+VVTY SL+D  CK  +++K
Sbjct: 282 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 341

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++  +M E+G++P + T+++LIDG CK G +  A  L+  +++K    DV  +T +I 
Sbjct: 342 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 401

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           GL K+G   E L +  +M +    P+  T   +I  LF+
Sbjct: 402 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 440



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 233/447 (52%), Gaps = 7/447 (1%)

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +  ++L  +M  KGIE  +V  +ILI+  C+  +M  + S+   + + G  PN  T+  L
Sbjct: 27  LTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTL 86

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           M G C   +V + L F+ +++    Q N V++G L++GLCK GE R A      +     
Sbjct: 87  MKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRST 146

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+ +Y+ +IDG CK   + EA  L SEM+  EI P+V TYN LI   C  GQL GA  
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFS 206

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL +M  + I  +V T++ LID  CKEG  + A  +   M + GV PNV +++ +I+G C
Sbjct: 207 LLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLC 264

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   +D AM L  EM+ K++VPD V + +LIDGL K G +   L L  EM        V 
Sbjct: 265 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 324

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SL+  L KN  +  A   F++  ++       P    Y A+I  LC  G++  A +L
Sbjct: 325 TYTSLLDALCKNQNLDKATALFMKMKERG----IQPTMYTYTALIDGLCKGGRLKNAQEL 380

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG-YQ 554
           F  +       D  TYT M+ GL +     + + + + M   G +P+AV  ++++R  ++
Sbjct: 381 FQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 440

Query: 555 ENGDLKSAFRCSEFLKESRIGSSETEG 581
           ++ + K+     E + +  +G     G
Sbjct: 441 KDENDKAEKLLHEMIAKGLLGFRNFHG 467



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 238/453 (52%), Gaps = 6/453 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N +L  L+K   + +V    ++M + G+  ++VT  +LI+C C  G +  + +L  +++ 
Sbjct: 14  NKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILK 73

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P  + +T L+ GLC + ++ +       +       N  +Y  L++G CK  +   
Sbjct: 74  LGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRC 133

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A++    +   + +PNVV +  ++DGLCK   +  A + +  M    +FPN+  YN LI 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C AG L  A SL  EM    I+PDV+T++ILI  LC  G+   A+ +   M + G+  
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNP 251

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV +YN +I+G CK   +++A+++  +M  K + P+ VT++SLIDG CK+G I +A+ L 
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  +    DVV +T+L+D L K+ N+ +   L+ +M E  I P+++T ++LI GL K 
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR+ NA   F     K     C  +   Y  +I  LC +G   +A  + S M  +   P+
Sbjct: 372 GRLKNAQELFQHLLVKG----CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 427

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             T+  ++R L           LL +MI  G++
Sbjct: 428 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 190/349 (54%), Gaps = 5/349 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   + TL+    + G    A+ + R IE     P +   +A+++GL K    +  ++ Y
Sbjct: 114 NQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLY 173

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM    +  +V+TY  LI   C  G +M A +L  EMI K I P V  ++ILI  LC E
Sbjct: 174 SEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K   A+ +F +M + GV PN+Y+YN +++G CK   V+ A+    EMLH N+ P+ VT+
Sbjct: 234 GK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLCK G + +A N    M   G   ++  Y  L+D  CK  NL +A +L  +M++
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P ++TY  LI GLC  G+L+ A+ L Q +  +G   +V TY  +I G CKEG  ++
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           AL++ S+M + G  PN VTF  +I    +    D A  L  EM+ K L+
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 6/371 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N ++    K+      +    +M    ++ N+VT  +L++  C +G++  + +    + 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K G  PN   +  L+ G C  G + + +    ++       +  +Y  L+ GLC  G+  
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  LL+ +       NVV Y+++IDG CK+  + +A  + S+M  + + PNV+T+++LI
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              C AG +  A  L  EM++K++ PDV  F+ LID L K+G  K   +++  M++  + 
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN 250

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V++ + +I+GL K  R+  A+N   E   K       P+ V Y ++I  LC  G+I  
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN----MVPDTVTYNSLIDGLCKSGRITS 306

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L ++M       D  TYT++L  L + + +     L   M + GI P       ++ 
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366

Query: 552 GYQENGDLKSA 562
           G  + G LK+A
Sbjct: 367 GLCKGGRLKNA 377



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 160/305 (52%), Gaps = 6/305 (1%)

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           I  +N ++    K       +SL  +M+   I  ++ T +ILI   C +GQ+  +  LL 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           K+ K G   N +T+ +L+ G C +G+++K L    ++  +  + N V++ +L++G CK G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
               A+ L   +  +S  P+VV+++A+IDGL KD  + E   LY EM   +I P+V T +
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI      G++  A +   E   K      +P+   ++ +I ALC +G+   A ++F  
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKN----INPDVYTFSILIDALCKEGK--NAKQIFHA 243

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    + P+  +Y  M+ GL + KR+ + M LL +M+   +VPD V    ++ G  ++G 
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 559 LKSAF 563
           + SA 
Sbjct: 304 ITSAL 308



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 163/351 (46%), Gaps = 6/351 (1%)

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++ F  ++  L K+       +    M   G+  N+   + LI+  C  G +  + SL  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           ++ K    P+  T+  L+KGLC  G+++       K+  +    N V+Y +L++G CK G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +   A+ +   + ++   PNVV +S++IDG CK   ++ A  LY+EM  + + P+V+ + 
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI      G +     L  EM+   I P V+T S LI  L K G+  NA   F      
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +PN   Y  +I  LC   ++ +A  L  +M   N+ PD  TY +++ GL ++ R
Sbjct: 248 G----VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +   + L+ +M   G   D V    ++    +N +L  A      +KE  I
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 263/561 (46%), Gaps = 74/561 (13%)

Query: 58  LIIAFSEMGHIEEALWVYR----------------------KIEVLPAIQACNALLNGLI 95
           L++ F E G +  + W+ R                      K+  +    ACN+LL GL 
Sbjct: 257 LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM--------ID 147
           ++G F+ + E  E+MV   +  +VVT+G+LI+  C    V  AL + ++M        I 
Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 376

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCKVADVN 206
             +EP VVIY  LI GLC   +  E   +   MR + G  P+  TYN L+DG+CK  ++ 
Sbjct: 377 VSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +  E + EM    + PNVVT   L+ G+C+ G + +A NFFV   + G+  +   Y  LI
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +  C   N  +AM L +EM K   SPD   Y  LI G    G++  A  +L ++ K GI 
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            + V YN+LI G+C+     +   +  +M E G++P+ +T+++LI    K G++  A  +
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKV 616

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLF 445
             +M+   +VP V  + A+I+    +GN  E + ++K+M  A K+ P+    + LI+ L 
Sbjct: 617 MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLC 676

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           KN ++ +A++                                       L  DM+   + 
Sbjct: 677 KNNKVKSAVS---------------------------------------LMEDMKIWGVT 697

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  TY  + +GL   K +  V   +  MI+    PD +  +++       G+++   R 
Sbjct: 698 PNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE---RL 754

Query: 566 SEFLKESRIGSSETEGHTTRS 586
            +F+    + SS  +  ++RS
Sbjct: 755 KKFVAGCEVSSSTAQKASSRS 775



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 194/419 (46%), Gaps = 13/419 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK-----------IEVLPAIQACNALLNGLIKKGK 99
           N   F  LI    +   +++AL V  K           + V P +   N L++GL K G+
Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR 398

Query: 100 FDSVWEFYEEM-VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
                   E M    G   D +TY  LID  C  G++ K   LFDEM  +G+ P VV   
Sbjct: 399 QQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVN 458

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            L+ G+C   ++  A + F   +  G+  +  TY AL++ +C V +  +A+E ++EML  
Sbjct: 459 TLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS 518

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              P+ + +  L+ G  + G +  A      + K G+ P+   YN LI G C+       
Sbjct: 519 GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRV 578

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +  EME+  + PD  TYN LI      G L+ A+ +++KM K G++  V TY ++I+ 
Sbjct: 579 FEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638

Query: 339 YCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           YC  G+  +A+ +   M     V PN V ++ LI+  CK   + +A+ L  +M I  + P
Sbjct: 639 YCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTP 698

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           +   + A+  GL  + ++++       M+E    P   T+  L   L   G I     F
Sbjct: 699 NTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKF 757



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 189/405 (46%), Gaps = 26/405 (6%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN----LQPNVVTFGVLMDGLCKVG--- 238
           V N Y  N  +    +   V  AL+   EM   N     +PN  T  +L   L K     
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNE 246

Query: 239 ELRAAG---NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           EL +     N  +   + GV  + F    LI   C+         L +EM K     +  
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
             N L+ GL   G       L++KM +  I  NVVT+  LI+  CK   ++ AL V  +M
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 356 T---EKG-----VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALI 406
           +   E G     VEP+VV +++LIDG CK G     +GL   M   K   PD + +  LI
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K G +++   L+ EM +  + P+V TV++L+ G+ + GR+S+A+NFF+E   +   
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G    + V Y A+I A C      KA +LF++M      PD   Y T++ G  +A RM D
Sbjct: 487 G----DAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
              +LA++ K+GI PD V    ++ G+         F   E LKE
Sbjct: 543 ASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF---EMLKE 584


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 158/562 (28%), Positives = 270/562 (48%), Gaps = 74/562 (13%)

Query: 74  VYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG---LVADVVTYGVLID 127
           V+R++  L   P + + NAL+ GL  + K     E    M   G      +VV+Y  +ID
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 128 CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
               +G+V KA  LFDEMI +G  P VV Y+ LI GLC    M +AE++ + M + GV+P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N  TYN ++ GYC +  +  A+    +M    LQP+VVT+ +L+   CK+G    A + F
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFE------------------------------ 277
             M + G  PN  +Y+ L+ G+   G L +                              
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391

Query: 278 -----AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
                AM+  +EM +  + PDV +Y+ +I  LC +G++E A     +M  EG+  N++++
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            SLI G C  G+ +K   +  +M  +G+ P+ +  ++++D  CK G +  A   +  ++ 
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 511

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + P+VV +  LIDG    G M E+++ +  M+   + P  +T ++L++G FKNGR+ +
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571

Query: 453 ALNFFLEKTDKTDGGYC--SPNHVL------------------------------YAAII 480
           AL  + E   K D  +C  + N +L                              Y  ++
Sbjct: 572 ALALYREMFRK-DVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 630

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC +  + +A ++F D+RS     D  T+  ++  LL+  R+ +   L + M+  G V
Sbjct: 631 GGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPV 690

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           P  +   +M++   E G L+ +
Sbjct: 691 PHVITYSLMIKSRIEEGLLEES 712



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 230/488 (47%), Gaps = 43/488 (8%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           + A+    G+LI C C  G +  A   F   +  G     V    LI GLC+  +  +A 
Sbjct: 90  MAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAM 149

Query: 175 SM-FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH---HNLQPNVVTFGVL 230
            M FR M E G  P++++YNAL+ G C       ALE    M     +N  PNVV++  +
Sbjct: 150 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTI 209

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG  K GE+  A   F  M   G  P++  Y+ LIDG CKA  + +A ++   M    +
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TYNI+I+G C +GQLE A  LL+KM   G+  +VVTY  LI  YCK G   +A S
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARS 329

Query: 351 VCSQMTEKGVEPNVVTFSSLIDG-----------------------------------QC 375
           V   M  KG +PN   +  L+ G                                     
Sbjct: 330 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 389

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +D AM  +TEM    L PDVV ++ +I  L K G +++ +  + +M+   ++P++ 
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           + +SLIHGL   G          E  ++       P+ +    I+  LC +G++++A   
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRG----IHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  +    ++P+  +Y T++ G     +M + +     M+ +G+ PD+     ++ GY +
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 556 NGDLKSAF 563
           NG ++ A 
Sbjct: 566 NGRVEDAL 573



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 250/518 (48%), Gaps = 9/518 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  +S+LI    +   + +A  + + +    V+P  +  N ++ G    G+ +   
Sbjct: 234 FPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV 293

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++M   GL  DVVTY +LI   C  G   +A ++FD M+ KG +P   IY IL+HG 
Sbjct: 294 RLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 353

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             +  +++   +   M   G+      +N L+  Y K   V++A+  + EM  + L+P+V
Sbjct: 354 ATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 413

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V++  ++  LCK+G +  A   F  M   G+ PNI  +  LI G C  G   +   L  E
Sbjct: 414 VSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    I PD    N ++  LC  G++  A+     +   G+  NVV+YN+LIDGYC  G 
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGK 533

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           M++++    +M   G+ P+  T+++L++G  K G ++ A+ LY EM  K +    +    
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 593

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++ GL + G +     LY +M++      + T ++++ GL +N  +  AL  F +   K 
Sbjct: 594 ILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 653

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                  +   +  +I AL   G+I +A  LFS M      P   TY+ M++  +    +
Sbjct: 654 ----FELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLL 709

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +   L   M K G   D+ +  V++R   E GD++ A
Sbjct: 710 EESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 208/405 (51%), Gaps = 1/405 (0%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           +A N L+    K G  D     + EM   GL  DVV+Y  +I   C  G V  A+  F++
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ +G+ P ++ +T LIHGLC+  +  + E +   M   G+ P+    N +MD  CK   
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V  A +F+  ++H  ++PNVV++  L+DG C VG++  +   F  M   G+ P+ + YN 
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L++G+ K G + +A++L  EM + ++     T NI++ GL   G++  A  L  KM   G
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
               + TYN+++ G C+   +++AL +   +  K  E +V TF+ +I+   K G ID A 
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L++ MV++  VP V+ ++ +I    ++G ++E+  L+  M +         ++ +I  L
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRL 738

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            + G +  A   +L K D+ +    +    L   I+    Y  ++
Sbjct: 739 LEKGDVRRA-GTYLTKIDEKNFSVEASTAALLIPIVSEKKYQKEV 782



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 211/437 (48%), Gaps = 20/437 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKP---------------HHVCYSVFNALNSL 45
           I+++L +    K A   ++D+ + +++   P               H        A   +
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 46  EIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
                 P V  +ST+I    ++G +E+A++ + ++    + P I +  +L++GL   G++
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
             V E   EM+  G+  D +    ++D  C +G V++A + FD +I  G++P VV Y  L
Sbjct: 465 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I G C   KM E+   F  M   G+ P+ +TYNAL++GY K   V  AL  Y EM   ++
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           +   +T  +++ GL + G + AA   ++ M   G    I  YN ++ G C+   + EA+ 
Sbjct: 585 KFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 644

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           +  ++   E   DV+T+NI+I  L  VG+++ A+ L   M   G + +V+TY+ +I    
Sbjct: 645 MFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRI 704

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           +EG +E++  +   M + G   +    + +I    + G++  A    T++  K+   +  
Sbjct: 705 EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAS 764

Query: 401 VFTALIDGLSKDGNMKE 417
               LI  +S+    KE
Sbjct: 765 TAALLIPIVSEKKYQKE 781



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 14/278 (5%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK-------ALSV 351
           IL +   G    E A  L  ++  +   A+V  +NS++    +             A+S+
Sbjct: 19  ILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSL 78

Query: 352 CSQMTEKGVE---PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            + M   GV     N      LI   C  G +D A   +   +        V    LI G
Sbjct: 79  FNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKG 138

Query: 409 LSKDGNMKETLRL-YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           L       + + + ++ M E   TP VF+ ++LI GL    +   AL   L  T   DGG
Sbjct: 139 LCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT--ADGG 196

Query: 468 Y-CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           Y CSPN V Y+ II     +G++ KA  LF +M      PD  TY++++ GL +A+ M  
Sbjct: 197 YNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNK 256

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              +L  M   G++P+     +M+RGY   G L+ A R
Sbjct: 257 AEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVR 294



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 19/286 (6%)

Query: 313 AEGLLQKMYKEGI---LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           A  L   M + G+    AN      LI  +C  G ++ A +  +   + G     VT + 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 370 LIDGQCKAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           LI G C     D AM + +  M      PDV  + ALI GL  +   +E L L   M   
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 429 ---KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                +P+V + S++I G FK G +  A   F    D+  G    P+ V Y+++I  LC 
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLF----DEMIGQGFPPDVVTYSSLIDGLCK 250

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
              + KA  +   M    + P+  TY  M+RG     ++ + + LL  M   G+ PD V 
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 310

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             ++++ Y + G      RC+E    S   S   +G    S + H+
Sbjct: 311 YILLIQYYCKIG------RCAE--ARSVFDSMVRKGQKPNSTIYHI 348


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 262/500 (52%), Gaps = 11/500 (2%)

Query: 68  IEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           + +AL+V  K++   + P+IQ  N+LL  L      D +W+ Y ++   G      T  +
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKDSGTPQSARTSSI 155

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           ++D  CGQ     A+    +   K   P+VV +  ++   C       A+S F  M + G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           ++P+ Y+YN L+ G      +  ALE  ++M    LQP++VT+ ++  G   +G +  A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 245 NFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                M    G+ P++  Y  LI GHC+ GN+ EA+ L  ++       +V  Y++L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  GQ++ A  LL +M    +  ++VTY+ LI G CK+G +++A+ +  +M    + PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
               S ++ G C+ G +  A   +  +++ +L PDV ++  +IDG  K G+++E +RLYK
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            + +  ITPS+ T +SLI+G  KN ++  A      ++ K  G    P+ V Y  ++ A 
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL--ESIKLHG--LEPSAVTYTTLMNAY 511

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G I K  +L  +M   ++ P   TYT +++GL + +++ + + LL DM   G+ PD 
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571

Query: 544 VINQVMVRGYQENGDLKSAF 563
           +    +++ + +  D++ AF
Sbjct: 572 ITYNTIIQCFCKAKDMRKAF 591



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 267/556 (48%), Gaps = 45/556 (8%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSV 103
           +F PSV  F+T++  + ++G  + A   +    K  +LP   + N L++GLI  G  +  
Sbjct: 180 EFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEA 239

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIH 162
            E   +M   GL  D+VTY ++       G +  A  +  +M+ D+G++P +V YT+LI 
Sbjct: 240 LELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C    + EA  + R +   G   N+  Y+ L+   CK   V+ AL+  +EM  +NLQP
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP 359

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF---------------------- 260
           ++VT+ +L+ GLCK G+++ A   +  M    +FPN F                      
Sbjct: 360 DLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYF 419

Query: 261 -------------VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
                        +YN +IDG+ K G++ EA+ L   +    I+P + T+N LI G C  
Sbjct: 420 DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKN 479

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
            ++  A  LL+ +   G+  + VTY +L++ YC+EG++ K   +  +M  K +EP VVT+
Sbjct: 480 RKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTY 539

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + +I G CK   ++ ++ L  +M  K L PD + +  +I    K  +M++   L  +ML 
Sbjct: 540 TVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLI 599

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P+  T + LI GL + G + +A    +   D+      +   V Y  +I+A C  G
Sbjct: 600 HNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN----INLTKVAYTTMIKAHCVKG 655

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
              +A K+F  M           Y+ ++  L +   + +       M+  G+ PD  I +
Sbjct: 656 DAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFE 715

Query: 548 VMVRGYQENGDLKSAF 563
           +M+  +   G + S F
Sbjct: 716 MMLNAFHRAGHVHSVF 731



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 263/545 (48%), Gaps = 9/545 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEV 80
           +LL + +   + + V+N +     P+ +    S ++          +A+   R+    E 
Sbjct: 123 SLLYNLRHTDIMWDVYNDIKDSGTPQ-SARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEF 181

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P++ + N +++   K G  D    F+  M+  G++ D  +Y +LI      G + +AL 
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGY 199
           L ++M  +G++P +V Y I+  G      M  A  + + M  + G+ P+L TY  L+ G+
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGH 301

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C++ ++  AL    ++L    Q NV+ + VL+  LCK G++  A      M    + P++
Sbjct: 302 CQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y+ LI G CK G + +A+ L  EM    I P+ F ++ ++KGLC  G L  A      
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDS 421

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +    +  +V  YN +IDGY K GD+E+A+ +  ++ +K + P++VTF+SLI G CK   
Sbjct: 422 LIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRK 481

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A  L   + +  L P  V +T L++   ++GN+ +   L  EM    I P+V T + 
Sbjct: 482 VVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTV 541

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL K  ++  ++    +   K      +P+ + Y  IIQ  C    + KA +L  DM
Sbjct: 542 VIKGLCKQRKLEESVQLLEDMRAKG----LAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              NL P   TY  ++ GL R   + D   +L  +    I    V    M++ +   GD 
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657

Query: 560 KSAFR 564
           + A +
Sbjct: 658 QRAVK 662



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 206/391 (52%), Gaps = 5/391 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L  +E     P +  +S LI    + G +++A+ +Y+++    + P   A + +L GL +
Sbjct: 349 LYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCE 408

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG       +++ +++  L  DV  Y ++ID     GDV +A+ L+  + DK I P++V 
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  LI+G C   K+VEA  +  S++  G+ P+  TY  LM+ YC+  ++N+  E   EM 
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN 528

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +++P VVT+ V++ GLCK  +L  +      M   G+ P+   YN +I   CKA ++ 
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A  L  +M    + P   TYN+LI GLC  G +E A+ +L  +    I    V Y ++I
Sbjct: 589 KAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMI 648

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             +C +GD ++A+ V  QM EKG E ++  +S++I+  CK   I+ A   +  M+   + 
Sbjct: 649 KAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVS 708

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           PD  +F  +++   + G++     L   M++
Sbjct: 709 PDQEIFEMMLNAFHRAGHVHSVFELLAVMIK 739



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 167/326 (51%), Gaps = 9/326 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
            +SL +    P V  ++ +I  + ++G +EEA+ +Y+++    + P+I   N+L+ G  K
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K        E + L GL    VTY  L++  C +G++ K   L  EM  K IEPTVV 
Sbjct: 479 NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT 538

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT++I GLC + K+ E+  +   MR  G+ P+  TYN ++  +CK  D+ +A E   +ML
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            HNL+P   T+ VL+DGLC+ G++  A    V +    +      Y  +I  HC  G+  
Sbjct: 599 IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658

Query: 277 EAMSLCSEM-EK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            A+ +  +M EK FE+S  +  Y+ +I  LC    +  A+     M  +G+  +   +  
Sbjct: 659 RAVKVFHQMVEKGFEVS--IKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEM 716

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGV 360
           +++ + + G +     + + M + G+
Sbjct: 717 MLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 186/374 (49%), Gaps = 8/374 (2%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V+ AL    +M   NL+P++ T+  L+  L     +    N    +   G   +    + 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYN---DIKDSGTPQSARTSSI 155

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           ++DG C      +A+    + +  E +P V ++N ++   C +G  + A+     M K G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           IL +  +YN LI G    G ME+AL + + M ++G++P++VT+  +  G    G +  A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 385 GLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
            +  +M+  + L PD+V +T LI G  + GN++E LRL +++L +    +V   S L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K G++  AL    E     +     P+ V Y+ +I  LC  G++ +A +L+ +M  + 
Sbjct: 336 LCKRGQVDEALQLLYE----MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + P++  ++ +L+GL     + D  M    +I   + PD  +  +M+ GY + GD++ A 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 564 RCSEFLKESRIGSS 577
           R  + L++  I  S
Sbjct: 452 RLYKRLRDKAITPS 465


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 259/550 (47%), Gaps = 48/550 (8%)

Query: 64  EMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-GLVADV 119
           ++ +I+EAL +++   +++ LP+++    LL  +++   + +     + M    G+ AD 
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           +T  ++I+C C    V    ++   M   G+EPTV+  T LI+GLC +  + +A  +   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M +     ++YTY  L++G CK  D   A+ +  +M   N +PNVV +  +MDGLCK G 
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A N    M   GV PN+  Y CLI G C  G   EA SL  EM K  + PD+   NI
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+   C  G++  A+ ++  M   G   +V TYNSLI  YC +  M +A+ V   M  +G
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI------------- 406
             P++V F+SLI G CK  NI+ AM L  EM     VPDV  +T LI             
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412

Query: 407 ----------------------DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                                 DGL K+  + E + L K M ++ +  ++   S L+ G+
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGM 472

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              G+++ A   F        G     N  +Y  +I+ LC  G + KA  L  +M  +  
Sbjct: 473 CSAGKLNAAWELF----SSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGC 528

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN-GDLKSAF 563
            P+NCTY   ++GLL  K +   +  L  M   G   DA   + ++     N GD K   
Sbjct: 529 LPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTK--- 585

Query: 564 RCSEFLKESR 573
              EFL   R
Sbjct: 586 -IREFLFRKR 594



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 184/367 (50%), Gaps = 3/367 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+ST++    + G + EAL +  ++    V P +     L+ GL   G++     
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGS 273

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G+  D+    +L+D  C +G VM+A ++   MI  G  P V  Y  LIH  C
Sbjct: 274 LLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +NKM EA  +F  M   G +P++  + +L+ G+CK  ++N+A+    EM      P+V 
Sbjct: 334 LQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G C+ G   AA   F++M K+G  PN+     ++DG CK   L EA+SL   M
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAM 453

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK  +  ++  Y+IL+ G+C  G+L  A  L   +  +G+  NV  Y  +I G CK+G +
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSL 513

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KA  +   M E G  PN  T++  + G      I  ++   T M  K    D      +
Sbjct: 514 DKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFI 573

Query: 406 IDGLSKD 412
           I+ LS +
Sbjct: 574 INYLSTN 580



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 3/410 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  LI    + G    A+   RK+E     P +   + +++GL K G          EM
Sbjct: 184 TYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  ++VTY  LI   C  G   +A +L DEM+  G+ P + +  IL+   C E K+
Sbjct: 244 NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKV 303

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           ++A+S+   M   G  P+++TYN+L+  YC    +N A+  +H M+     P++V F  L
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSL 363

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G CK   +  A +    M+K G  P++  +  LI G C+AG    A  L   M K+  
Sbjct: 364 IHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ T  +++ GLC    L  A  L + M K  +  N+V Y+ L+DG C  G +  A  
Sbjct: 424 VPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWE 483

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S +  KG++ NV  ++ +I G CK G++D A  L   M     +P+   +   + GL 
Sbjct: 484 LFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLL 543

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
               +  +++    M +   +    T   +I+ L  N   +    F   K
Sbjct: 544 TKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFLFRK 593


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 240/468 (51%), Gaps = 7/468 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF  L+ A+ +    +EAL    + ++ E++P  + CN+LL+ L+K  K    W  YEEM
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V   + + +VT+ ++I+  C +G   KA +    M   G++P VV Y  +I+G C   K 
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F++M++  + P+ YTYN+ +   CK   +  A     ++L   L PN VT+  L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DG C  G+L  A  +   M   G+  ++F YN LI        + EA  +  EM +  +
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TYNI I G C  G  + A  L  +M ++ I   V TY SLID + K   M +A  
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              +  ++G+ P+++ F++LIDG C  GNID A  L  EM    +VPD V F  L+ G  
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++  ++E  +L  EM E  I P   + ++LI G  K G + +AL  F    D+       
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF----DEMLSLGFD 564

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+IQ     G+   A +L  +M+S  + PD+ TY  ++  +
Sbjct: 565 PTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/372 (34%), Positives = 210/372 (56%), Gaps = 3/372 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++T+I  +   G  E A  +++ ++   + P     N+ ++ L K+ + +    
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +++  GLV + VTY  LID CC +GD+ KA    DEM+++GI  +V  Y +LIH L 
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E ++ EAE M + MRE GV P++ TYN  ++GYC+  +  +AL  + EM+  N++P V 
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+D   K   +  A   F    K G+ P+I ++N LIDGHC  GN+  A  L  EM
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +  ++ PD  T+N L++G C   ++E A+ LL +M + GI  + ++YN+LI GY K GDM
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + AL V  +M   G +P ++T+++LI G  K G  D A  L  EM  K + PD   +  +
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608

Query: 406 IDGLSKDGNMKE 417
           I+ +  + ++ E
Sbjct: 609 IEAMKTNDDLVE 620



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 226/411 (54%), Gaps = 4/411 (0%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T +++ +L+   C   K  EA      M+E  ++P   T N+L+    K+  +  A   Y
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM+  N++ ++VTF ++++ LC+ G+ + A +F  HM  +GV PN+  YN +I+G+C  
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G    A  +   M+   + PD +TYN  I  LC   ++E A G+L K+ + G++ N VTY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LIDG C +GD++KA +   +M  +G+  +V T++ LI        I+ A  +  EM  
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + PDVV +   I+G  + GN K+ L L+ EM+E  I P+V T +SLI    K  R+S 
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A     EK  K+      P+ +++ A+I   C +G I +A +L  +M +  + PD  T+ 
Sbjct: 446 AE----EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           T+++G  R +++ +   LL +M + GI PD +    ++ GY + GD+K A 
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 219/422 (51%), Gaps = 4/422 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  +++EM+   I+ ++V + I+I+ LC E K  +A+     M   GV PN+ TYN +++
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC       A + +  M   NL+P+  T+   +  LCK   +  A      + + G+ P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   YN LIDG C  G+L +A +   EM    I   VFTYN+LI  L    ++E AE ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M ++G+  +VVTYN  I+GYC+ G+ +KALS+  +M EK + P V T++SLID   K 
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +  A   + + + + ++PD+++F ALIDG   +GN+    +L KEM  AK+ P   T 
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++L+ G  +  ++  A     E  ++       P+H+ Y  +I      G +  A ++F 
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERG----IKPDHISYNTLISGYSKRGDMKDALEVFD 556

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M S    P   TY  +++G  +         LL +M   GI PD      ++   + N 
Sbjct: 557 EMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616

Query: 558 DL 559
           DL
Sbjct: 617 DL 618



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 213/418 (50%), Gaps = 38/418 (9%)

Query: 68  IEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I+ A +VY    K+ +  +I   N ++N L ++GK+    +F   M + G+  +VVTY  
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +I+  C +G    A  +F  M DK ++P    Y   I  LC E ++ EA  +   + E G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           +VPN  TYNAL+DG C   D+++A  +  EM++  +  +V T+ +L+  L     +  A 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM------------------- 285
           +    M + GV P++  YN  I+G+C+ GN  +A+SL  EM                   
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 286 ----------EKFEIS------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
                     EKF+ S      PD+  +N LI G C  G ++ A  LL++M    ++ + 
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT+N+L+ GYC+E  +E+A  +  +M E+G++P+ +++++LI G  K G++  A+ ++ E
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           M+     P ++ + ALI G SK G       L +EM    ITP   T   +I  +  N
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 4/300 (1%)

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM K  I   + T+NI+I  LC  G+ + A+  +  M   G+  NVVTYN++I+GYC  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
             E A  +   M +K ++P+  T++S I   CK   I+ A G+  +++   LVP+ V + 
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           ALIDG    G++ +      EM+   I  SVFT + LIH LF   RI  A +   E  +K
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+ V Y   I   C  G   KA  LF +M   N+RP   TYT+++    +  R
Sbjct: 387 G----VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           M +        IK G++PD ++   ++ G+  NG++  AF+  + +  +++   E   +T
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 239/467 (51%), Gaps = 6/467 (1%)

Query: 88  NALLNGLIKKGK--FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           N +L  L+K     + +       +   G+  D+ T+ +LI+C C   ++  A ++  ++
Sbjct: 70  NKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKI 129

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  G EP  + +  LI GLC   K+ EA      +   G   + ++Y  L++G CK+ + 
Sbjct: 130 LKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGET 189

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL+   ++    ++ NVV +  ++D LCK   +  A   +  M    + P++  ++ L
Sbjct: 190 RTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSAL 249

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G C  G L EA  L  EM    I+PD +T+NIL+  LC  G L+GA+ +L  M KEG+
Sbjct: 250 IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + NVVTY+SL+DGYC    + KA  V + +++ G  PN  ++ ++I+G CK   +D A+ 
Sbjct: 310 MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ +M  K + PD V + +LIDGL K G +     L  EM +     ++FT + LI  L 
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALC 429

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           KN  +  A+   L K  K  G    P+   +  +I  LC  G++  A  +F D+ S    
Sbjct: 430 KNHHVDQAIA--LVKKIKDQG--IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYS 485

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +  TY  M+ GL +     +   LL+ M   GI+PDAV  + +++ 
Sbjct: 486 VNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQA 532



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 242/481 (50%), Gaps = 7/481 (1%)

Query: 63  SEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           S   H   A+ + R++E   + P I   N L+N      + +  +    +++  G   D 
Sbjct: 79  SNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDT 138

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           +T+  LI   C  G V +AL+  D ++  G       Y  LI+GLC   +   A  M R 
Sbjct: 139 ITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRK 198

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           +    V  N+  YN ++D  CK   V  A E Y +M+   + P+VVTF  L+ G C VG+
Sbjct: 199 IDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQ 258

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F  M    + P+ + +N L+D  CK GNL  A ++   M K  + P+V TY+ 
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ G C V Q+  A+ +L  + + G   N  +Y ++I+G+CK   +++ALS+ + M  KG
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P+ VT++SLIDG CK+G I  A  L  EM       ++  +  LID L K+ ++ + +
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L K++ +  I P ++T + LI+GL K GR+ NA + F    D    GY S N   Y  +
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVF---QDLLSKGY-SVNAWTYNIM 494

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC +G   +A  L S M  + + PD  TY T+++ L           LL +MI   +
Sbjct: 495 VNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554

Query: 540 V 540
           V
Sbjct: 555 V 555



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 244/481 (50%), Gaps = 11/481 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL 81
           +L+KS   H+   +  +    LE     P +F+   LI  +  M  +  A  +  KI  +
Sbjct: 75  SLVKSNNNHYP--TAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKM 132

Query: 82  ---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
              P     N L+ GL   GK      F++ ++  G   D  +YG LI+  C  G+   A
Sbjct: 133 GYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L +  ++  K ++  VV+Y  +I  LC    +++A  ++  M    + P++ T++AL+ G
Sbjct: 193 LQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYG 252

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C V  +  A   + EM+  N+ P+  TF +L+D LCK G L+ A N  V M K GV PN
Sbjct: 253 FCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN 312

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  Y+ L+DG+C    + +A  + + + +   +P+  +Y  +I G C +  ++ A  L  
Sbjct: 313 VVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFN 372

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +GI  + VTYNSLIDG CK G +  A  +  +M + G   N+ T++ LID  CK  
Sbjct: 373 DMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNH 432

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A+ L  ++  + + PD+  F  LI GL K G +K    +++++L    + + +T +
Sbjct: 433 HVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYN 492

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +++GL K G    A    L K D  D G   P+ V Y  +IQAL +  +  KA KL  +
Sbjct: 493 IMVNGLCKEGLFDEA-EALLSKMD--DNGII-PDAVTYETLIQALFHKDENEKAEKLLRE 548

Query: 499 M 499
           M
Sbjct: 549 M 549



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 216/425 (50%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L   +   GI P +  + ILI+  C+  +M  A SM   + + G  P+  T+N L+ 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C    V  AL F+  +L      +  ++G L++GLCK+GE R A      +    V  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +ID  CK   + +A  L S+M   +ISPDV T++ LI G C VGQLE A GL 
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  + I  +  T+N L+D  CKEG+++ A ++   M ++GV PNVVT+SSL+DG C  
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             ++ A  +   +      P+   +  +I+G  K   + E L L+ +M    I P   T 
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI GL K+GRIS A     E  D         N   Y  +I ALC +  + +A  L  
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQ----PANIFTYNCLIDALCKNHHVDQAIALVK 442

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            ++   ++PD  T+  ++ GL +  R+ +   +  D++  G   +A    +MV G  + G
Sbjct: 443 KIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEG 502

Query: 558 DLKSA 562
               A
Sbjct: 503 LFDEA 507



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 204/354 (57%), Gaps = 3/354 (0%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDS 102
           ++ K N  +++T+I +  +   + +A  +Y ++   ++ P +   +AL+ G    G+ + 
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
            +  + EMVL  +  D  T+ +L+D  C +G++  A N+   M+ +G+ P VV Y+ L+ 
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C  N++ +A+ +  ++ + G  PN ++Y  +++G+CK+  V+ AL  +++M    + P
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           + VT+  L+DGLCK G +  A      M   G   NIF YNCLID  CK  ++ +A++L 
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +++   I PD++T+NILI GLC VG+L+ A+ + Q +  +G   N  TYN +++G CKE
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G  ++A ++ S+M + G+ P+ VT+ +LI         + A  L  EM+ + +V
Sbjct: 502 GLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 201/391 (51%), Gaps = 3/391 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    ++G    AL + RKI+   V   +   N +++ L K       +E Y +M+
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DVVT+  LI   C  G + +A  LF EM+ K I P    + IL+  LC E  + 
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A++M   M + GV+PN+ TY++LMDGYC V  VN+A    + +      PN  ++  ++
Sbjct: 296 GAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMI 355

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G CK+  +  A + F  M   G+ P+   YN LIDG CK+G +  A  L  EM      
Sbjct: 356 NGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQP 415

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            ++FTYN LI  LC    ++ A  L++K+  +GI  ++ T+N LI G CK G ++ A  V
Sbjct: 416 ANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDV 475

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +  KG   N  T++ +++G CK G  D A  L ++M    ++PD V +  LI  L  
Sbjct: 476 FQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFH 535

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
               ++  +L +EM+   +  ++  +  ++H
Sbjct: 536 KDENEKAEKLLREMIARDVVYALEGLEMVLH 566



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 6/363 (1%)

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG--ELRAAGNFFVHMAKFGVFPNIFV 261
           DV+  +  ++ +L      +++ F  ++  L K        A +    +   G+ P+IF 
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFT 105

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LI+ +C    +  A S+ +++ K    PD  T+N LIKGLC  G+++ A      + 
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   +  +Y +LI+G CK G+   AL +  ++  K V+ NVV ++++ID  CK   + 
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  LY++M+ K + PDVV F+ALI G    G ++E   L++EM+   I P  +T + L+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K G +  A N  +    +       PN V Y++++   C   Q+ KA  + + +  
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEG----VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               P+  +Y TM+ G  + K + + + L  DM   GI PD V    ++ G  ++G +  
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401

Query: 562 AFR 564
           A+ 
Sbjct: 402 AWE 404


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/541 (31%), Positives = 262/541 (48%), Gaps = 35/541 (6%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G  E+A  + R++     +P     + ++  L    K D+ +  +EEM    +V DV TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +LID  C  G + +A   FDEM+  G  P VV YT LIH      KM  A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH---------------NLQ-PNVVT 226
            G +PN+ TY AL+DG+CK   + +A + Y  M  +               N++ PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +G L+DGLCK  +++ A +    M+  G  PN  VY+ LIDG CK G L EA  + ++M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P+V+TY+ LI  L    +L+ A  +L +M +     NV+ Y  +IDG CK G  +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + S M EKG  PNVVT++++IDG  KAG +D  + L  +M  K   P+ V +  LI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +     G + +  +L  EM +      +     +I G  +   IS  L       D+   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL------LDEIAE 872

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS--DNLRPDNCTYTTMLRGLLRAKRM 524
               P    Y  +I + C  G++  A +L  +M S       D   Y++++  L  A ++
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS--------EFLKESRIGS 576
                L ADMIK G +P+  I   +V+G       + A + S        +F++E  +GS
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGS 992

Query: 577 S 577
           S
Sbjct: 993 S 993



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 250/557 (44%), Gaps = 29/557 (5%)

Query: 41  ALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKK 97
           AL   E  K +  +++ +I    E    EEA   L   R    +P +     LL G ++K
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            +          M+  G       +  LI   C  GD   A  L  +M D G +P  V+Y
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 158 TILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            ILI G+C   K+        AE  +  M +  VV N    + L    C      +A   
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             EM+     P+  T+  ++  LC   ++  A   F  M    V P++F Y  LID  CK
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L +A     EM +   +P+V TY  LI       ++  A  L + M  EG + NVVT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKG----------------VEPNVVTFSSLIDGQC 375
           Y +LIDG+CK G +EKA  + ++M                     +PN+ T+ +L+DG C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  +  A  L   M ++   P+ +V+ ALIDG  K G + E   ++ +M E    P+V+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLI  LFK+ R+  AL       + +    C+PN ++Y  +I  LC  G+  +A +L
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENS----CAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S M      P+  TYT M+ G  +A ++   + L+  M   G  P+ V  +V++     
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 556 NGDLKSAFRCSEFLKES 572
            G L  A +  + +K++
Sbjct: 824 AGLLDDAHQLLDEMKQT 840



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 245/499 (49%), Gaps = 23/499 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + S +S +I        ++ A  ++ +++   V+P +     L++   K G      +++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  G   +VVTY  LI        +  A  LF+ M+ +G  P VV YT LI G C  
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 168 NKMVEAESMFRSMRECGVVP----------------NLYTYNALMDGYCKVADVNRALEF 211
            ++ +A  ++  MR    +P                N++TY AL+DG CK   V  A + 
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M     +PN + +  L+DG CKVG+L  A   F  M++ G  PN++ Y+ LID   K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              L  A+ + S M +   +P+V  Y  +I GLC VG+ + A  L+  M ++G   NVVT
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y ++IDG+ K G ++K L +  QM  KG  PN VT+  LI+  C AG +D A  L  EM 
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                  +  +  +I+G +++  +  +L L  E+ E    P +     LI    K GR+ 
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL    E +  T   Y + +  LY+++I++L    ++ KA +L++DM      P+   +
Sbjct: 897 LALELHKEMSSCT--SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 512 TTMLRGLLRAKRMLDVMML 530
             +++GL+R  R  + + L
Sbjct: 955 FYLVKGLIRINRWEEALQL 973



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 220/493 (44%), Gaps = 58/493 (11%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           VLI  CC  G    AL     + D G +P+ + Y  L+      +++  A  + R M + 
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 184 GVVPNLYT--------------------------------YNALMDGYCKVADVNRALEF 211
           G   + YT                                Y  ++ G C+ +    A++F
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M   +  PNVVT+ +L+ G  +  +L         M   G +P+  ++N LI  +C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG------VGQLEGAEGLLQKMYKEGI 325
           +G+   A  L  +M      P    YNILI G+CG      +  LE AE    +M    +
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHV 441

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N V  ++L    C  G  EKA S+  +M  KG  P+  T+S +I   C A  +D A  
Sbjct: 442 VLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFL 501

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    +VPDV  +T LID   K G +++  + + EM+     P+V T ++LIH   
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD--- 502
           K  ++S+A   F  +   ++G  C PN V Y A+I   C  GQI KA ++++ MR +   
Sbjct: 562 KARKMSSANELF--EMMLSEG--CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 503 ------------NLR-PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
                       N+R P+  TY  ++ GL +A ++ +   LL  M   G  P+ ++   +
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 550 VRGYQENGDLKSA 562
           + G+ + G L  A
Sbjct: 678 IDGFCKVGKLDEA 690


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 252/476 (52%), Gaps = 9/476 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           E P  N   FS LI  F + G +E+AL  Y+K+EVL   P++   + ++ G +K  K + 
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             + ++E    GL A+V     ++   C QG   +A  L  +M  +GI P VV Y  ++ 
Sbjct: 428 ALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C +  M  A  +F ++ E G+ PN YTY+ L+DG  +  D   ALE  + M   N++ 
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSL 281
           N V +  +++GLCKVG+   A     +M +      +   YN +IDG  K G +  A++ 
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    ISP+V TY  L+ GLC   +++ A  +  +M  +G+  ++  Y +LIDG+CK
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
             +ME A ++ S++ E+G+ P+   ++SLI G    GN+ AA+ LY +M+   L  D+  
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T LIDGL KDGN+     LY EM    + P     + +++GL K G+    +  F E+ 
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF-EEM 785

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            K +    +PN ++Y A+I     +G + +A +L  +M    + PD  T+  ++ G
Sbjct: 786 KKNN---VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 267/550 (48%), Gaps = 42/550 (7%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P+ +   +++   +K+G  D      +EM+  G+  +VV    LI   C   D++ AL 
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LFD+M  +G  P  V +++LI       +M +A   ++ M   G+ P+++  + ++ G+ 
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K      AL+ + E     L  NV     ++  LCK G+   A      M   G+ PN+ 
Sbjct: 421 KGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI------------------- 301
            YN ++ GHC+  N+  A  + S + +  + P+ +TY+ILI                   
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539

Query: 302 ----------------KGLCGVGQLEGAEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGD 344
                            GLC VGQ   A  LL  M +E  L  + ++YNS+IDG+ KEG+
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           M+ A++   +M   G+ PNV+T++SL++G CK   +D A+ +  EM  K +  D+  + A
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDG  K  NM+    L+ E+LE  + PS    +SLI G    G +  AL+ +  K    
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY--KKMLK 717

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           DG  C      Y  +I  L  DG ++ AS+L+++M++  L PD   YT ++ GL +  + 
Sbjct: 718 DGLRCDLG--TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLKESRIGSSETEGHT 583
           + V+ +  +M K  + P+ +I   ++ G+   G+L  AFR   E L +  +    T    
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835

Query: 584 TRSFLGHLKP 593
               +G+L+P
Sbjct: 836 VSGQVGNLQP 845



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 278/633 (43%), Gaps = 109/633 (17%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   F+ L+ A+S+    + A+ +  +   ++V+P     N  L+ L+++       E
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y  MV  G+  D VT  +L+     +    +AL +    I++G EP  ++Y++ +   C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279

Query: 166 NENKMVEAESMFRSMRECGV-VPNLYTY-------------------------------- 192
               +  A S+ R M+E  + VP+  TY                                
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339

Query: 193 ---NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
               +L+ G+CK  D+  AL  + +M      PN VTF VL++   K GE+  A  F+  
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILIKGLCGVG 308
           M   G+ P++F  + +I G  K     EA+ L    E FE    +VF  N ++  LC  G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD--ESFETGLANVFVCNTILSWLCKQG 457

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           + + A  LL KM   GI  NVV+YN+++ G+C++ +M+ A  V S + EKG++PN  T+S
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517

Query: 369 SLID-----------------------------------GQCKAGNIDAAMGLYTEMV-I 392
            LID                                   G CK G    A  L   M+  
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K L    + + ++IDG  K+G M   +  Y+EM    I+P+V T +SL++GL KN R+  
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637

Query: 453 ALNFFLEKTDK-----------TDGGYC--------------------SPNHVLYAAIIQ 481
           AL    E  +K              G+C                    +P+  +Y ++I 
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                G ++ A  L+  M  D LR D  TYTT++ GLL+   ++    L  +M  +G+VP
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           D +I  V+V G  + G      +  E +K++ +
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 6/397 (1%)

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           S +  G   N   +N L++ Y K    + A++  ++ML  ++ P        +  L +  
Sbjct: 153 SAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRN 212

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            L  A   +  M   GV  +      L+    +     EA+ + S   +    PD   Y+
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           + ++  C    L  A  LL++M ++ + + +  TY S+I    K+G+M+ A+ +  +M  
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G+  NVV  +SLI G CK  ++ +A+ L+ +M  +   P+ V F+ LI+   K+G M++
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            L  YK+M    +TPSVF V ++I G  K  +   AL  F E  +    G    N  +  
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET---GLA--NVFVCN 447

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            I+  LC  G+  +A++L S M S  + P+  +Y  ++ G  R K M    ++ +++++ 
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           G+ P+     +++ G   N D ++A      +  S I
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 191/447 (42%), Gaps = 14/447 (3%)

Query: 115 LVADVVTYG----VLIDCCCGQGDVMKALNLFDEMIDK----GIEPTVVIYTILIHGLCN 166
           LV+   TYG    +LI           A  L  +++D     G E     +  L++    
Sbjct: 116 LVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSK 175

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + +   A  +   M E  V+P     N  +    +   +  A E Y  M+   +  + VT
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM- 285
             +LM    +  +   A        + G  P+  +Y+  +   CK  +L  A SL  EM 
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK    P   TY  +I      G ++ A  L  +M  +GI  NVV   SLI G+CK  D+
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL +  +M ++G  PN VTFS LI+   K G ++ A+  Y +M +  L P V     +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I G  K    +E L+L+ E  E  +  +VF  ++++  L K G+   A         K +
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELL----SKME 470

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN V Y  ++   C    +  A  +FS++    L+P+N TY+ ++ G  R     
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRG 552
           + + ++  M    I  + V+ Q ++ G
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIING 557



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 7/276 (2%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   N   +N L++ Y K+   + A+ + +QM E  V P     +  +    +  ++  A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             LY+ MV   +  D V    L+    ++    E L +    +E    P     S  +  
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K   ++ A +   E  +K     C P+   Y ++I A    G +  A +L  +M SD 
Sbjct: 278 CCKTLDLAMANSLLREMKEKK---LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +  +    T+++ G  +   ++  ++L   M K G  P++V   V++  +++NG+++ A 
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394

Query: 564 RCSEFLKESRI-GSSETEGHTTRSFLGHLKPTVYKE 598
              EF K+  + G + +  H      G LK   ++E
Sbjct: 395 ---EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI    + G++  A  +Y +++   ++P       ++NGL KKG+F  V + +EEM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  +V+ Y  +I     +G++ +A  L DEM+DKGI P    + IL+ G     + 
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845

Query: 171 VEAESM 176
           V A S+
Sbjct: 846 VRAASL 851


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 175/553 (31%), Positives = 251/553 (45%), Gaps = 10/553 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K     ++ L++  S    I+E   VY ++    V P I   N ++NG  K G       
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +  ++V  GL  D  TY  LI   C   +V  A  +F  M +KG     V YT LIHG C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA  +F  M E    P + TY  ++   C++     AL  + EM   + QPNV 
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ VL+  LC+      A      M + G+ P++  YN LIDG+CK G    A+ + S M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E    SP+  TYN LI G C    +  A  LL KM +  +  NVVTYN LI G CKEGD+
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + S M E G+ P+  T+S  ID  CK G ++ A  L+  +  K +  + V+++ L
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K G + +   L  +ML A   P+  T +SLI G  K      A    ++   K D
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRD 584

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P    Y  +I  L  D +  +A  +F  M S    PD   YT  +       R+ 
Sbjct: 585 ---IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTR 585
           D  +L+  M   GI+PD ++  + +  Y   G +  AF     LK       E   +T  
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF---GILKRMHEVGCEPSYYTYS 698

Query: 586 SFLGHLKPTVYKE 598
             + HL     KE
Sbjct: 699 CLIKHLSNAKPKE 711



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 215/508 (42%), Gaps = 52/508 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI+ F    +I +A+ +  K+   ++ P +   N L++G  K+G   S ++  
Sbjct: 413 NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GLV D  TY V ID  C +G V +A +LF+ + +KGI+   VIY+ LI G C  
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKV 532

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +   +   M   G VPN  TYN+L+DGYCK  +   A      M+  +++P   T+
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+D L K  E   A + F  M   G  P++F+Y   I  +C  G L +A  L  +M  
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNA 652

Query: 288 FEISPDV-----------------------------------FTYNILIKGLCGVGQLEG 312
             I PD                                    +TY+ LIK L      E 
Sbjct: 653 KGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           +          G+ +N  +         +  D E  L +  +M E G  PN  T+   I 
Sbjct: 713 SSSSELSDLSSGVASNDFS------NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFIT 766

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G ++ A  L+  M  K   P+  ++ +L+    + G   E +R    M+E +  P
Sbjct: 767 GLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLP 826

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH--VLYAAIIQALCYDGQIL 490
            + +   L+ GL+  G    A   F           C  N+  +++  +I  L   G   
Sbjct: 827 HLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ------CEYNYDEMVWKVLIDGLLKKGLSD 880

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           K S LF  M +   +    TY+ ++ G 
Sbjct: 881 KCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 61/416 (14%)

Query: 204 DVNRALEFYHEM-----LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           D   AL F++ +       HN+Q +V    +L+      G LR A N  + M K      
Sbjct: 89  DPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPN----GYLRIAENMRILMIKS----- 139

Query: 259 IFVYNCLIDGHCKAGNLFEAM-SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
                   D    A  + E + S+   ++ F+    +  YN+L+  L     ++  + + 
Sbjct: 140 -------TDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVY 192

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  + +  N+ T N++++GYCK G++ +A    S++ + G+  +  T++SLI G C+ 
Sbjct: 193 LEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 252

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            N+DAA  ++  M  K  + + V +T LI G  +   + E L+L+ +M E    P+V T 
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK--- 494
           + +I  L + GR + ALN F E T+K    +C PN   Y  +I +LC D     A K   
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEK----HCQPNVHTYTVLICSLCEDSNFDDAKKILN 368

Query: 495 --------------------------------LFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                                           + S M S+N  P+  TY  ++ G  R K
Sbjct: 369 GMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            +   M LL  M++  + P+ V   +++ G  + GDL SA++    + ES +   E
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484



 Score = 42.4 bits (98), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 66/159 (41%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P        + GL K G  +     ++ M   G   +   Y  L+ C C  G   +A+  
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRW 815

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D MI+    P +    +L+ GL +E    +A+ +F S  +C    +   +  L+DG  K
Sbjct: 816 LDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLK 875

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
               ++  + +  M     Q +  T+ +L++G   + E+
Sbjct: 876 KGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEI 914


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 249/533 (46%), Gaps = 42/533 (7%)

Query: 61  AFSEMGHIEEALWV-YRKIEVLPAIQAC-----NALLNGLIKKGKFDSVWEFYEEMVLCG 114
           AF+  G  + AL   YR +  L   +       N L++ L+++    +V   Y+ M   G
Sbjct: 99  AFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDG 158

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V TY +L+   C    V  A  + DEM  KG  P  V Y  ++  LC  +++ EA 
Sbjct: 159 VHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEAT 218

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +  +M      P   +YNA++   C+   +        +M+   LQPNV+T+  ++D  
Sbjct: 219 EVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAF 273

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK GELR A      M   G  PN+  +  L+ G    G + +A+ +   M     +P  
Sbjct: 274 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST 333

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +YNILI+GLC VG L+GA  +L  M + G   NV TY++LIDG+ K GD+  A+S+ + 
Sbjct: 334 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWND 393

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M+  G +PNVV +++++D  CK    + A  L  +M++++  P+ V F  LI  L     
Sbjct: 394 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 453

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------DK 463
           +   L ++ EM      P+  T + LIHGLF+ G   +AL+   E             + 
Sbjct: 454 VGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNT 513

Query: 464 TDGGYCS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
              G C                     PN   ++AII A C +G++  A+ +   M   N
Sbjct: 514 VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 573

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              +   YT ++  L    +++D M  L  M+  GI P+ V   V+VRG   N
Sbjct: 574 CHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 626



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 226/467 (48%), Gaps = 43/467 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC-NALLNGLIKKGKFDSVWEFYEEMVLC 113
           ++T++    ++  ++EA  V   +  +P + A  NA++  L ++ +   V+    +MV  
Sbjct: 201 YATIVSVLCKLDRLDEATEV---LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGR 257

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL  +V+TY  ++D  C  G++  A  +   M+  G  P VV +T L+ GL ++ ++ +A
Sbjct: 258 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 317

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             M+R M   G  P+  +YN L+ G C V D+  A    + M  H   PNV T+  L+DG
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 377

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
             K G+L  A + +  M++ G  PN+ VY  ++D  CK     +A SL  +M      P+
Sbjct: 378 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 437

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T+N LI+ LC   ++  A G+  +M + G + N  TYN LI G  +EG+   AL + +
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 497

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M   G+E ++VT+++++ G C+      AM    +M+++ + P+   F+A+I    K+G
Sbjct: 498 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 557

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
                +R+   ML A                       N +N             C  N 
Sbjct: 558 E----VRMAAWMLGAM----------------------NVVN-------------CHRNI 578

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           ++Y  ++  LC   +++ A      M  + + P+  T+  ++RG+ R
Sbjct: 579 LVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 625



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLN 92
           VF+ ++ +      P+V  ++T++ AF + G +  A  +  ++ +    P +    AL+ 
Sbjct: 247 VFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVR 306

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL   G+     + +  MV  G     V+Y +LI   C  GD+  A ++ + M   G  P
Sbjct: 307 GLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFP 366

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V  Y+ LI G      +  A S++  M   G  PN+  Y  ++D +CK    N+A    
Sbjct: 367 NVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLI 426

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +ML  N  PN VTF  L+  LC    +  A   F  M + G  PN   YN LI G  + 
Sbjct: 427 DKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 486

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN  +A+ + +EM+   I   + TYN ++ GLC       A   + KM  +GI  N  T+
Sbjct: 487 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 546

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++I  YCKEG++  A  +   M       N++ ++ L+   C    +  AM    +M+ 
Sbjct: 547 SAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLY 606

Query: 393 KSLVPDVVVFTALIDGLSKD 412
           + + P+ V +  L+ G+ ++
Sbjct: 607 EGIYPNTVTWNVLVRGVFRN 626



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN LID   +E  +   + V   M + GV PNV T++ L+   C+   + AA  +  EM 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K   PD V +  ++  L K   + E      E+L A + P   + ++++  L +  R+ 
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEA----TEVL-AAMPPVAASYNAIVLALCREFRMQ 245

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
              +     +D    G   PN + Y  I+ A C  G++  A  + + M      P+  T+
Sbjct: 246 EVFSVV---SDMVGRGL-QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 301

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           T ++RGL    R+ D + +   M+  G  P  V   +++RG    GDLK A
Sbjct: 302 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 352


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 245/463 (52%), Gaps = 5/463 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V +F   M+       ++ +  ++D          A++L   +  KGI+P ++   IL
Sbjct: 42  DAVSQF-NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  ++    S+   + + G  P+  T N L+ G C    V +AL F+ ++L    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           Q N V++  L++G+CK+G+ R A      +      PN+ +Y+ +ID  CK   + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L SEM    IS DV TY+ LI G C  G+L+ A GLL +M  + I  NV TYN L+D  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A SV + M +  V+P+V+T+S+L+DG      +  A  ++  M +  + PDV 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T LI+G  K+  + E L L+KEM +  + P + T SSLI GL K+GRI    +   E 
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D+        + + Y+++I  LC +G + +A  LF+ M+   +RP+  T+T +L GL +
Sbjct: 401 RDRGQPA----DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             R+ D   +  D++  G   +     VM+ G+ + G L+ A 
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 246/473 (52%), Gaps = 21/473 (4%)

Query: 43  NSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK 97
           + LE+    P + +   LI  F  MG I     V  KI      P     N L+ GL  K
Sbjct: 83  HRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLK 142

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+      F+++++  G   + V+Y  LI+  C  GD   A+ L  ++  +  +P V +Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 202

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I  LC    + EA  +F  M   G+  ++ TY+ L+ G+C    +  A+   +EM+ 
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC------K 271
             + PNV T+ +L+D LCK G+++ A +    M K  V P++  Y+ L+DG+       K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A ++F AMSL        ++PDV TY ILI G C    ++ A  L ++M+++ ++  +VT
Sbjct: 323 AQHVFNAMSLMG------VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLIDG CK G +     +  +M ++G   +V+T+SSLIDG CK G++D A+ L+ +M 
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P++  FT L+DGL K G +K+   +++++L      +V+T + +I+G  K G + 
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            AL        K +   C PN   +  II AL    +  KA KL   M +  L
Sbjct: 497 EALTML----SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 262/514 (50%), Gaps = 11/514 (2%)

Query: 44  SLEIPKFNP----SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK 96
           SL IP F+     S  S        + ++++A+  + ++  +   P I   N +L+   K
Sbjct: 12  SLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAK 71

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
              + +       + L G+  D++T  +LI+C C  G +    ++  +++ +G  P  V 
Sbjct: 72  MKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVT 131

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
              LI GLC + ++ +A      +   G   N  +Y  L++G CK+ D   A++   ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 191

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               +PNV  +  ++D LCK   +  A   F  M   G+  ++  Y+ LI G C  G L 
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ L +EM    I+P+V+TYNIL+  LC  G+++ A+ +L  M K  +  +V+TY++L+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY    +++KA  V + M+  GV P+V T++ LI+G CK   +D A+ L+ EM  K++V
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +++LIDGL K G +     L  EM +      V T SSLI GL KNG +  A+  
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F +  D+       PN   +  ++  LC  G++  A ++F D+ +     +  TY  M+ 
Sbjct: 432 FNKMKDQE----IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           G  +   + + + +L+ M   G +P+A   + ++
Sbjct: 488 GHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 38/386 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   ++TLI    ++G    A+ + RKI+     P ++  + +++ L K       + 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM + G+ ADVVTY  LI   C +G + +A+ L +EM+ K I P V  Y IL+  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 166 NENKMVEAESM-----------------------------------FRSMRECGVVPNLY 190
            E K+ EA+S+                                   F +M   GV P+++
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY  L++G+CK   V+ AL  + EM   N+ P +VT+  L+DGLCK G +    +    M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G   ++  Y+ LIDG CK G+L  A++L ++M+  EI P++FT+ IL+ GLC  G+L
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+ + Q +  +G   NV TYN +I+G+CK+G +E+AL++ S+M + G  PN  TF ++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV 396
           I    K    D A  L  +M+ + L+
Sbjct: 521 IIALFKKDENDKAEKLLRQMIARGLL 546


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 275/593 (46%), Gaps = 54/593 (9%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFN--PSVFSTLI 59
           F  +AN+  +++     + + E L +  +   V Y     L  +++   N    +F  +I
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQY----ILQQMKMDGINCCEDLFICII 116

Query: 60  IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             +  +G  E+AL ++ +I      P ++  N LL+ L+ + KF  +   Y  M   GL+
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI 176

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY +L+   C    V  A  LF EM +KG  P  V YT ++  LC   K+ +A  +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
               +     P++  YNAL+DG CK   +  A++   EM+ + + PNVV++  +++ LC 
Sbjct: 237 AGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 237 VGELRAAGNFFVH-----------------------------------MAKFGVFPNIFV 261
            G +  A   F                                     M + G  PN+  
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C  G+L EA+ +C +M++    P+V TY+ILI G    G L GA     +M 
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   NVVTY  ++D  CK    ++A S+  +MT +G  PN +TF++ I G C  G ++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L   M     +P++  +  L+D L +    +E   L++E+    + P++ T ++++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  + G +  AL  F +   +      +P+ + Y  +I A C  G++  A++L   + S
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGT----APDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587

Query: 502 -DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
                PD  TYT+++ G      + + M  L   I  GI P+      +VR +
Sbjct: 588 MKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 258/552 (46%), Gaps = 15/552 (2%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           DV + L   R    V    F+A+ +    +   S +  +I        ++   ++ ++++
Sbjct: 43  DVLKRLKTDRNLSSV-LGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101

Query: 80  VLPAIQACNAL----LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
            +  I  C  L    +NG  + G  +   + +  +   G    V  Y  L+D    +   
Sbjct: 102 -MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                L+  M   G+ P V  Y IL+  LC  +++  A  +F  M   G  P+  TY  +
Sbjct: 161 QMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   CK   ++ A E     L    +P+V  +  L+DG+CK G +  A      M   GV
Sbjct: 221 VSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y+C+I+  C +GN+  A +L ++M       ++ T+  LIKG    G+L  A  
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L + M ++G   NVV YN+LI G C  G +E+AL VC QM   G  PNV T+S LIDG  
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+G++  A   +  M+     P+VV +T ++D L K+    +   L ++M     TP+  
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTI 455

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++ I GL  NGR+  A+       ++  G  C PN   Y  ++ AL    +  +A  L
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLL----ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F ++ + NL+P+  TY T+L G  RA  M + + L    +  G  PD++    M+  Y +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571

Query: 556 NGDLKSAFRCSE 567
            G +K A +  E
Sbjct: 572 QGKVKIAAQLVE 583


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 250/529 (47%), Gaps = 66/529 (12%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP++   + L + + ++ ++D V  F +EM L G+  ++ T  ++I+C C +  ++ A +
Sbjct: 66  LPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFS 125

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +    +  G EP  + ++ LI+G C E ++ EA ++   M E    PN+ T N L++G C
Sbjct: 126 VVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLC 185

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V  AL     M+ +  + N +T+G +++ +CK G    A + F  M +  +  ++ 
Sbjct: 186 LKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVV 245

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +ID  CK GNL +A+SL +EME   I  DV  Y+ +I GLC  G+ +    +L++M
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 321 YKEGILANVVT-----------------------------------YNSLIDGYCKEGDM 345
               I+ NVVT                                   Y+SLIDG+CKE  +
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A  +   M  KG EPN+VT+S LI+  CKA  +D  M L+ E+  K LV D V +  L
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------- 457
           + G  + G +     L++EM+   + PSV T   L+ GL  NG +  AL  F        
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 458 ----------------LEKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQILKASK 494
                             K D     +CS       P+ + Y  +I  LC  G + +A  
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           LF  M+ D   P +CTY  ++R  L    ++  + L+ +M   G   DA
Sbjct: 546 LFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADA 594



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/431 (32%), Positives = 215/431 (49%), Gaps = 38/431 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   FSTLI  F   G + EA+  V R +E+   P +   N L+NGL  KG+        
Sbjct: 138 NTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLI 197

Query: 108 EEMVLCGLVADVVTYG-----------------------------------VLIDCCCGQ 132
           + MV  G  A+ +TYG                                   ++ID  C  
Sbjct: 198 DRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKD 257

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G++  AL+LF+EM  KGI+  VV Y+ +I GLCN+ +  +   M R M    ++PN+ T+
Sbjct: 258 GNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTF 317

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           +AL+D + K   +  A E Y+EM+   + P+ +T+  L+DG CK   L  A      M  
Sbjct: 318 SALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVS 377

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PNI  Y+ LI+ +CKA  +   M L  E+    +  D  TYN L++G C  G+L  
Sbjct: 378 KGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNV 437

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A+ L Q+M   G+  +VVTY  L+DG C  G+++KAL +  +M +  +   +  ++ +I 
Sbjct: 438 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIH 497

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C A  +D A  L+  + +K + PDV+ +  +I GL K G++ E   L+++M E    P
Sbjct: 498 GMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAP 557

Query: 433 SVFTVSSLIHG 443
           S  T + LI  
Sbjct: 558 SDCTYNILIRA 568



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 246/532 (46%), Gaps = 33/532 (6%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L NG++   K +   + +E M+    +  ++ +  L      + +    L    EM   G
Sbjct: 41  LRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNG 99

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           IE  +    I+I+  C + K++ A S+     + G  PN  T++ L++G+C    V+ A+
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+    +PNVVT   L++GLC  G +  A      M K+G   N   Y  +++  
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK+GN   A+ L  +ME+  I   V  Y+I+I  LC  G L+ A  L  +M  +GI A+V
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y+S+I G C +G  +    +  +M  + + PNVVTFS+LID   K G +  A  LY E
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           MV + + PD + +++LIDG  K+  + E  ++   M+     P++ T S LI+   K  R
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399

Query: 450 ISNALNFFLEKTDK---TDG--------GYCS--------------------PNHVLYAA 478
           + N +  F E + K    D         G+C                     P+ V Y  
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC +G++ KA ++F  M+   +      Y  ++ G+  A ++ D   L   +   G
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG 519

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE-TEGHTTRSFLG 589
           + PD +   VM+ G  + G L  A      +KE     S+ T     R+ LG
Sbjct: 520 VKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLG 571


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 240/472 (50%), Gaps = 14/472 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            +  L   +   G + +A  V   + V P     N L++ L ++G+        ++M+  
Sbjct: 137 AYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR 196

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DVVTY +L++  C      +A+ L D M  +G  P  V Y +L+ G+C E  + +A
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R++   G  P+   YN ++ G C       A E   EML  N  PN  TF V++  
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G L+ A      M+K G   NI  YN +I+G C+  N+  AM L S+M+ +   PD
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN L+KGLC   Q   AE L+  M + G L + VT+N+LI   C++G M  A+ V  
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM +KG  PN +T+S++I G  KA  +D A+ L+ EM  K   PD  ++  L + L+ D 
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDD 495

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            ++E ++  +++ ++ I+P     ++++ GL +NG+   A++             C P+ 
Sbjct: 496 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG----CMPDD 551

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           + Y  +I+ L Y+G + +A +L   +         C+   ++  L++++ +L
Sbjct: 552 LTYVILIEGLAYEGYLNEARELLIKL---------CSRDVLVNSLIKSEALL 594



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 247/503 (49%), Gaps = 13/503 (2%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLVADV 119
           A    G ++ AL +       P     N L+  L ++G+ D      E +V  CG  A V
Sbjct: 80  ALVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDA----ERVVGACGPAATV 135

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           V YG L D  C  G +  A  +   M    ++P    Y  LIH LC   ++ +A S+   
Sbjct: 136 VAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDD 192

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  P++ TYN L++  CK     +A+E    M      PN VT+ VLMDG+C  G+
Sbjct: 193 MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A     ++   G  P+   YN ++ G C A    +A  L +EM +    P+  T+N+
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  G L+ A  LL+KM K G  AN+VTYN++I+G C++ +++ A+ + S+M   G
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            +P++VT+++L+ G C A     A  L   M     +PD V F  LI  L + G M + +
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            ++K+M +   TP+  T S++I GL K  ++  AL  F E   K   G+ +P+ + Y  +
Sbjct: 433 EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK---GF-NPDKI-YQLL 487

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
            + L  D  I +A +    ++   + P    Y  +L GL R  +    + ++A M+  G 
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 547

Query: 540 VPDAVINQVMVRGYQENGDLKSA 562
           +PD +   +++ G    G L  A
Sbjct: 548 MPDDLTYVILIEGLAYEGYLNEA 570



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 14/443 (3%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +GD+  AL L +        P   +   L+  LC   +  +AE   R +  CG    +  
Sbjct: 84  RGDLDAALRLVES---SPRPPDAALANRLVRDLCRRGRPDDAE---RVVGACGPAATVVA 137

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y AL DGYC+   +  A      M    +QPN  T+  L+  LC+ G++R A +    M 
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDML 194

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G  P++  YN L++  CK     +AM L   M     +P+  TYN+L+ G+CG G ++
Sbjct: 195 CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD 254

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  LL+ +   G   + V YN+++ G C       A  + ++M  +   PN  TF+ +I
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              C+ G +  A+ L  +M       ++V + A+I+GL +  N+   + L  +M      
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCK 374

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P + T ++L+ GL    +  +A        D      C P++V +  +I  LC  G ++ 
Sbjct: 375 PDIVTYNTLLKGLCSAAQWVDAEELM----DNMTQNGCLPDNVTFNTLIGFLCQKGLMVD 430

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A ++F  M      P++ TY+T++ GL +A ++   + L  +M   G  PD  I Q++  
Sbjct: 431 AIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAE 489

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
              ++  ++ A +    L++S I
Sbjct: 490 CLNDDDTIEEAIQTVRKLQDSGI 512


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 246/487 (50%), Gaps = 25/487 (5%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLE--IPKFNPSVFSTL 58
           + + LAN+K Y   R  +    +N        H   SVF++L  L+   P     +   L
Sbjct: 84  VLHFLANSKRYSKVRSFLDSFVKN------EKHTVSSVFHSL-LLDGGRPGATALIIDML 136

Query: 59  IIAFS---EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++A+    E+    EA    +      ++ +CN LL+ L+K+ K   V   Y+EM+   +
Sbjct: 137 VLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRI 196

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN---KMVE 172
             ++ T+ + I+  C  G + KA +  ++M   GI P VV Y  L+ G C      KM +
Sbjct: 197 HTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYK 256

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           AE+  + M    + PN  T+N L+DG+CK  +V  A + + EM    L+PN+VT+  L++
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC  G+L  A + +  M   G+ PNI  YN LI+G CK   + EA  +  ++ K E+ P
Sbjct: 317 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 376

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V T+N +I   C  G +E    L   M  EGIL NV TYN LI G C++ D++ A  + 
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELL 436

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  KG++ +VVT++ LIDG CK      A  L  EM    L P+ V +  L+DG   +
Sbjct: 437 NEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCME 496

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYC 469
           G +K  L +   M + +  P+V T + LI G  K  ++  A   LN  LEK         
Sbjct: 497 GKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG-------L 549

Query: 470 SPNHVLY 476
           +PN   Y
Sbjct: 550 NPNRTTY 556



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/373 (36%), Positives = 207/373 (55%), Gaps = 11/373 (2%)

Query: 51  NPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-- 105
           N + F+  I      G +   E+A+   +   + P +   N L++G  K+G    +++  
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258

Query: 106 -FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
            F +EM+   +  + VT+  LID  C   +V  A   F+EM  +G++P +V Y  LI+GL
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           CN  K+ EA  ++  M   G+ PN+ TYNAL++G+CK   +  A + + ++    L PNV
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 378

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +TF  ++D  CK G +    +    M   G+ PN+  YNCLI G C+  +L  A  L +E
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 438

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME   +  DV TYNILI GLC   +   AE LL +M+  G+  N VTYN+L+DGYC EG 
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 498

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-----DV 399
           ++ AL+V ++M ++  +PNVVT++ LI G CK   ++AA GL  EM+ K L P     D+
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558

Query: 400 VVFTALIDGLSKD 412
           V    L  G S D
Sbjct: 559 VRLEMLEKGFSPD 571



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 215/408 (52%), Gaps = 7/408 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A   F    D G + ++     L+  L  ENK+ + E +++ M +  +  NL T+N  ++
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK---VGELRAAGNFFVHMAKFG 254
           G C+   +N+A +   +M    + PNVVT+  L+DG CK    G++  A  F   M    
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN   +N LIDG CK  N+  A     EM+K  + P++ TYN LI GLC  G+LE A 
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  KM   G+  N+VTYN+LI+G+CK+  M++A  V   ++++ + PNV+TF+++ID  
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G ++    L + M+ + ++P+V  +  LI GL +  +++    L  EM    +   V
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI GL KN +  NA     E  +        PNHV Y  ++   C +G++  A  
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLG----LKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           + + M  +  +P+  TY  +++G  +  ++     LL +M++ G+ P+
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 224/428 (52%), Gaps = 9/428 (2%)

Query: 140 NLFDEMIDKGIEP--TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           ++F  ++  G  P  T +I  +L+       ++  A   F   ++ G   +L + N L+ 
Sbjct: 114 SVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLS 173

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
              K   +      Y EM+   +  N+ TF + ++GLC+ G+L  A +    M  +G+ P
Sbjct: 174 ALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISP 233

Query: 258 NIFVYNCLIDGHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           N+  YN L+DG+CK   AG +++A +   EM   +I P+  T+N LI G C    +  A+
Sbjct: 234 NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAK 293

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
              ++M K+G+  N+VTYNSLI+G C  G +E+A+ +  +M   G++PN+VT+++LI+G 
Sbjct: 294 KAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGF 353

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   +  A  ++ ++  + LVP+V+ F  +ID   K+G M+E   L   ML+  I P+V
Sbjct: 354 CKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI GL +   +  A     E  +K   G    + V Y  +I  LC + +   A K
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEMENKGLKG----DVVTYNILIDGLCKNDKSRNAEK 469

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L ++M +  L+P++ TY T++ G     ++   + +   M K    P+ V   V+++GY 
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529

Query: 555 ENGDLKSA 562
           +   L++A
Sbjct: 530 KINKLEAA 537



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 224/446 (50%), Gaps = 30/446 (6%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTYNALMDG-------- 198
           G+EPT    + ++H L N  +  +  S   S    E   V +++ ++ L+DG        
Sbjct: 77  GLEPT----SKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVF-HSLLLDGGRPGATAL 131

Query: 199 --------YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
                   Y K  +++ A E +     +  + ++ +   L+  L K  ++      +  M
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM 191

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC---GV 307
            K  +  N+  +N  I+G C+AG L +A     +M+ + ISP+V TYN L+ G C     
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G++  AE  +++M    I  N VT+N+LIDG+CK+ ++  A     +M ++G++PN+VT+
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +SLI+G C  G ++ A+ L+ +MV   L P++V + ALI+G  K   MKE  +++ ++ +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            ++ P+V T +++I    K G +    +     +   D G   PN   Y  +I  LC   
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLC---SSMLDEGIL-PNVSTYNCLIAGLCRKQ 427

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +  A +L ++M +  L+ D  TY  ++ GL +  +  +   LL +M  +G+ P+ V   
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESR 573
            ++ GY   G LK+A      +++ R
Sbjct: 488 TLMDGYCMEGKLKAALNVRTRMEKER 513


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 219/390 (56%), Gaps = 10/390 (2%)

Query: 32  HHVCYSVFNALNSLEI----PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPA 83
            H+C S      +LE+    P+ N   ++T+I  F   G ++ AL + R++     + P 
Sbjct: 496 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 554

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
                 +++G  K G+ D   + ++EM+  G V  + V Y  LI   C QG +  AL   
Sbjct: 555 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 614

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M+++G+  TV  Y +L+H L  + +  EA  +   M   G+ P+++TYN L++G+CK 
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 674

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V +ALE +  M    ++  VVT+  L+  L K G+++     F    + G+ P++ +Y
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 734

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+ H  +GN+  A  +  EMEK  I+PD  TYN L++GLC +G+++ A  L+ +M +
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 794

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  ++VTYN+LI GY  +GD++ AL + ++M  KG  P ++T+++LI G CK G  D 
Sbjct: 795 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 854

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +  EMV   + PD   + +LI+GL+ +
Sbjct: 855 AENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 237/468 (50%), Gaps = 11/468 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S+ + L+ A + +     +L +Y +++ L ++    A L+ L+        +  + +M  
Sbjct: 423 SLPNLLLTASAAVRPHATSLRLYSRMKSL-SLPISTASLHPLLSALPSAPAFALFADMFR 481

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             L     T+ +++   C  G   +AL L  +M      P  V Y  +I G C+  ++  
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQA 537

Query: 173 AESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVL 230
           A  + R MRE  G+ PN YTY  ++ G+CKV  V+ A++ + EML    ++P  V +  L
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C  G+L  A  +   M + GV   +  YN L+      G   EA  L  EM    +
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PDVFTYNILI G C  G ++ A  + + M + G+ A VVTY +LI    K+G +++   
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +   +G+ P++V +++LI+    +GNID A  +  EM  K + PD V +  L+ GL 
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 777

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + E  +L  EM E  I P + T ++LI G    G + +AL    E  +K   G+ +
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK---GF-N 833

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           P  + Y A+IQ LC +GQ   A  +  +M  + + PD+ TY +++ GL
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF +M    +      + I++  LC+  K   A  + R M      PN  TYN ++ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  AL+   EM     + PN  T+G ++ G CKVG +  A   F  M   G V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P   +YN LI G+C  G L  A+     M +  ++  V TYN+L+  L   G+   A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M  +G+  +V TYN LI+G+CKEG+++KAL +   M+ +GV   VVT+++LI    
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +     L+ E V + + PD+V++ ALI+  S  GN+     +  EM + +I P   
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL   GR+  A     E T++       P+ V Y  +I      G +  A ++
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERG----IQPDLVTYNTLISGYSMKGDVKDALRI 823

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            ++M +    P   TY  +++GL +  +  D   ++ +M++ GI PD
Sbjct: 824 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A ++F  M    +     T+N ++   C      RALE  
Sbjct: 452 SLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 511

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA +    M  + G+ PN + Y  +I G CK
Sbjct: 512 RQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 567

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+ +  EM  K E+ P+   YN LI G C  G+L+ A     +M + G+   V 
Sbjct: 568 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 627

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +G   +A  +  +M  KG+ P+V T++ LI+G CK GN+  A+ ++  M
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 687

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + +   VV +TALI  LSK G ++ET +L+ E +   I P +   ++LI+    +G I
Sbjct: 688 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 747

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A KL  +M    ++PD  T
Sbjct: 748 DRAFEIMGEMEKK----RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    +++G  +NG
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 850



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 180/359 (50%), Gaps = 10/359 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +  A+ +  EM E+  I+P+ +TY  +I G C VG+++ A  +  +M  +G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
               V YN+LI GYC +G ++ AL    +M E+GV   V T++ L+      G    A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L PDV  +  LI+G  K+GN+K+ L +++ M    +  +V T ++LI+ L 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G++      F E   +       P+ VLY A+I +    G I +A ++  +M    + 
Sbjct: 708 KKGQVQETDKLFDEAVRRG----IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD+ TY T++RGL    R+ +   L+ +M + GI PD V    ++ GY   GD+K A R
Sbjct: 764 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 822



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 164/294 (55%), Gaps = 3/294 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ LI  + + G ++ AL +  R +E  V   +   N L++ L   G+    +E  EEM
Sbjct: 593 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 652

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  DV TY +LI+  C +G+V KAL +F+ M  +G+  TVV YT LI+ L  + ++
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E + +F      G+ P+L  YNAL++ +    +++RA E   EM    + P+ VT+  L
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M GLC +G +  A      M + G+ P++  YN LI G+   G++ +A+ + +EM     
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +P + TYN LI+GLC  GQ + AE ++++M + GI  +  TY SLI+G   E +
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 161/308 (52%), Gaps = 10/308 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L ++M +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL +  +M E+G + PN  T+ ++I G CK G +D A+ ++ EM+ K  V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    G +   L     M+E  +  +V T + L+H LF +GR + A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY- 646

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++  G   +P+   Y  +I   C +G + KA ++F +M    +R    TYT ++
Sbjct: 647 ---ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 703

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
             L +  ++ +   L  + ++ GI PD V+   ++  +  +G++  AF     +++ RI 
Sbjct: 704 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763

Query: 576 SSETEGHT 583
             +   +T
Sbjct: 764 PDDVTYNT 771


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 242/487 (49%), Gaps = 7/487 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P ++ CN +L  L    ++D +   Y +M+  G+   + TY  L+D  C  G + +A+
Sbjct: 190 VAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAV 249

Query: 140 NLFDEMIDK--GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L  +M  +  G  P  V Y ++I+GL  + ++ +A  +   MR      + +TYN L+ 
Sbjct: 250 ALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLIT 308

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G      V +A     EM +  + P VVT+  L+DGL K G   AA   F  M   G+ P
Sbjct: 309 GLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLP 368

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN LI+G+CKAGNL +A+ L  ++++  + P V TYNILI G C +G LEGA  L 
Sbjct: 369 DLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLK 428

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M +E  L +V TY  L++G C   ++        +M  KG+EP+   +++ I  +   
Sbjct: 429 EEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTI 488

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  L  EM+++ +  D V +  LIDGL K G++K+   L+ +M+   +     T 
Sbjct: 489 GAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTY 548

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LIH   + GR+  A N F    D       SP+ V Y   I   C  G +  A   F 
Sbjct: 549 TCLIHAHCERGRLIEAKNIF----DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFR 604

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M  + + P+  TY  ++  L R  R         +M++ G+VP+     +++ G  + G
Sbjct: 605 KMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEG 664

Query: 558 DLKSAFR 564
           +   A R
Sbjct: 665 NWVHAIR 671



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 226/473 (47%), Gaps = 45/473 (9%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEV-----LPAIQACNALLNGLIKKGKFDSVW 104
           PS+F+  TL+ +F + G +++A+ + + +E      LP     N ++NGL +KG+ +   
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286

Query: 105 EFYEEMVLC----------------------------------GLVADVVTYGVLIDCCC 130
           +  + M L                                   G+V  VVTY  LID   
Sbjct: 287 QLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLF 346

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
             G+   A   FDEM  KG+ P ++ Y  LI+G C    + +A  +F  ++  G+ P + 
Sbjct: 347 KTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+DGYC++ D+  A     EM   +  P+V T+ +LM+G C V  L     FF  M
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G+ P+ F YN  I      G +  A  L  EM    IS D  TYN+LI GLC  G L
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSL 526

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L  KM  +G+  + VTY  LI  +C+ G + +A ++   M   G+ P+VVT++  
Sbjct: 527 KDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIF 586

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   C+ GN+  A G + +M+ + + P+ V +  L+  L + G  +   + + EMLE  +
Sbjct: 587 IHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGL 646

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            P+ +T + LI G  K G   +A+  + E   K       P+H  + A+ +  
Sbjct: 647 VPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG----IHPDHCTHNALFKGF 695



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 215/429 (50%), Gaps = 7/429 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           + L+ F EM   G+ P V     ++  L +  +  +  +++  M + GV P+++TYN L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 197 DGYCKVADVNRALEFYHEMLHH--NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           D +CK   +++A+    +M        PN VT+ V+++GL + GEL  A    V + +  
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLS 295

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              + F YN LI G      + +A +L  EME   I P V TYN LI GL   G  E A+
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               +M  +G+L +++TYNSLI+GYCK G++++AL +   +   G+ P V+T++ LIDG 
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G+++ A  L  EM  +  +PDV  +T L++G     N+      + EML   + P  
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDC 475

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           F  ++ I      G I+NA     E   +      S + V Y  +I  LC  G +  A  
Sbjct: 476 FAYNTRISAELTIGAITNAFQLREEMMLRG----ISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L+  M +D LR D  TYT ++       R+++   +   M+  G+ P  V   + +  Y 
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYC 591

Query: 555 ENGDLKSAF 563
             G+L  A+
Sbjct: 592 RRGNLYLAY 600



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 169/342 (49%), Gaps = 5/342 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  + + G++++AL ++   ++  + P +   N L++G  + G  +      EEM
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                + DV TY +L++  C   ++      FDEM+ KG+EP    Y   I        +
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAI 491

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G+  +  TYN L+DG CK   +  A   + +M+   L+ + VT+  L
Sbjct: 492 TNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   C+ G L  A N F  M   G+ P++  Y   I  +C+ GNL+ A     +M +  +
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TYN+L+  LC +G+ E A     +M + G++ N  TY  LIDG CKEG+   A+ 
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +  +M +KG+ P+  T ++L  G  +    DA    Y E V+
Sbjct: 672 LYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQ--YLENVV 711



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 7/323 (2%)

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  MA+ GV P +   NC++     A    +  ++ S+M +  + P +FTYN L+   C 
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 307 VGQLEGAEGLLQKMYKE--GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
            G+++ A  LL+ M     G L N VTYN +I+G  ++G++EKA  +   M     + + 
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASA 300

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            T++ LI G      ++ A  L  EM  + +VP VV +  LIDGL K GN +     + E
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M    + P + T +SLI+G  K G +  AL  F    D    G   P  + Y  +I   C
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLF---GDLKRAGL-GPTVLTYNILIDGYC 416

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G +  A +L  +M  ++  PD CTYT ++ G    + +  V +   +M+  G+ PD  
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 545 INQVMVRGYQENGDLKSAFRCSE 567
                +      G + +AF+  E
Sbjct: 477 AYNTRISAELTIGAITNAFQLRE 499



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            Q+M + G+   V   N ++         +   +V S M + GVEP++ T+++L+D  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 377 AGNIDAAMGLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           AG +D A+ L  +M  ++   +P+ V +  +I+GL++ G +++  +L   M  +K   S 
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASA 300

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT + LI GL     +  A    LE  ++       P  V Y  +I  L   G    A  
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEG----IVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F +MR+  L PD  TY +++ G  +A  +   + L  D+ + G+ P  +   +++ GY 
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 555 ENGDLKSAFRCSEFLKE 571
             GDL+ A R  E + E
Sbjct: 417 RLGDLEGARRLKEEMTE 433



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           + LS   +M   GV P V   + ++     A   D    +Y++M+   + P +  +  L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 407 DGLSKDGNMKETLRLYKEMLEAKIT---PSVFTVSSLIHGLFKNGRISNALNFF-LEKTD 462
           D   K G M + + L K+M EA+     P+  T + +I+GL + G +  A     + +  
Sbjct: 237 DSFCKAGRMDQAVALLKDM-EARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLS 295

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K    +       Y  +I  L     + KA  L  +M ++ + P   TY T++ GL +  
Sbjct: 296 KKASAFT------YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTG 349

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
                 +   +M   G++PD +    ++ GY + G+LK A      LK + +G +
Sbjct: 350 NAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPT 404


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 180/679 (26%), Positives = 301/679 (44%), Gaps = 148/679 (21%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS---------------------------- 56
           LLKS K  H   S+F+++         P VF                             
Sbjct: 16  LLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCK 75

Query: 57  -------TLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFD---S 102
                  T+I A+++    ++AL +++++  +    P I++ N+LLN LI+  K+D   S
Sbjct: 76  CPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 103 VWEFYEEMVLC--------------------------------GLVADVVTYGVLIDCCC 130
            + ++E M L                                 G   DV +YG LI+   
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPNL 189
             G +  AL LFDEM ++G+ P V  Y ILI G   +  ++ A  ++ R ++   V PN+
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +YN +++G CK    + + E +H M  +    ++ T+  L+ GLC  G L  A   +  
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK---------------------- 287
           MA+ GV P++ VYN +++G+ +AG + E + L   MEK                      
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKV 375

Query: 288 ------FEISP------DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
                 +E+ P      D  TY +L+ GLC  G L  A  +L++        +   Y+S+
Sbjct: 376 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM 435

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G C+EG +++   V  QMT+ G +PN    +++I+G  +A  ++ A+  +  MV K  
Sbjct: 436 INGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGC 495

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P VV +  LI+GLSK     E   L KEML     P++ T S L++GL +  ++  ALN
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALN 555

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS----DNL------- 504
            + +  +K   G+  P+  ++  II  LC  G++  A +L+S+M+      NL       
Sbjct: 556 LWCQALEK---GF-KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611

Query: 505 ------------------------RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
                                   +PD  +Y   L+GL    R+ D +  L D +  G++
Sbjct: 612 EGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 671

Query: 541 PDAVINQVMVRGYQENGDL 559
           P A+   ++VR   +NG L
Sbjct: 672 PTAITWNILVRAVLDNGAL 690



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 261/514 (50%), Gaps = 9/514 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++L+ A  E    +EA   +   E +   P +Q  N L+    +K +FD   E    M 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DV +YG LI+     G +  AL LFDEM ++G+ P V  Y ILI G   +  ++
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 172 EAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            A  ++ R ++   V PN+ +YN +++G CK    + + E +H M  +    ++ T+  L
Sbjct: 237 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L  A   +  MA+ GV P++ VYN +++G+ +AG + E + L   MEK E 
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK-EG 355

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              V +YNILI+GL    +++ A  + + + ++   A+ +TY  L+ G CK G + KALS
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +      + +   +SS+I+G C+ G +D   G+  +M      P+  V  A+I+G  
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +++ LR +  M+     P+V T ++LI+GL K  R S A     E   K   G+  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK---GW-K 531

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y+ ++  LC   ++  A  L+        +PD   +  ++ GL  + ++ D + L
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            ++M +   VP+ V +  ++ G+ +  D + A +
Sbjct: 592 YSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 266/522 (50%), Gaps = 10/522 (1%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           T+I A+++    ++AL +++++  +    P I++ N+LLN LI+  K+D    F+     
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL  ++ TY +LI   C +    KA  L + M ++G  P V  Y  LI+ L     M +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLM 231
           A  +F  M E GV P++  YN L+DG+ K  D+  A E +  +L   ++ PN+ ++ V++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK G+   +   +  M K     +++ Y+ LI G C +GNL  A  +  EM +  +S
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV  YN ++ G    G++E    L + M KEG    VV+YN LI G  +   +++A+S+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISI 381

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              + EK    + +T+  L+ G CK G ++ A+ +  E        D   ++++I+GL +
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G + E   +  +M +    P+    +++I+G  +  ++ +AL FF     K     C P
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG----CFP 497

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
             V Y  +I  L    +  +A  L  +M     +P+  TY+ ++ GL + K++   + L 
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
              ++ G  PD  ++ +++ G   +G ++ A +    +K+ +
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 199/401 (49%), Gaps = 4/401 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI      G+++ A  VY+++    V P +   N +LNG ++ G+ +   E ++ M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G    VV+Y +LI        V +A+++++ + +K      + Y +L+HGLC    +
Sbjct: 352 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S+           + + Y+++++G C+   ++       +M  H  +PN      +
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G  +  +L  A  FF +M   G FP +  YN LI+G  KA    EA +L  EM     
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++ TY++L+ GLC   +L+ A  L  +  ++G   +V  +N +I G C  G +E AL 
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S+M ++   PN+VT ++L++G  K  + + A  ++  ++     PD++ +   + GL 
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
               + + +    + ++  + P+  T + L+  +  NG ++
Sbjct: 651 SCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 240/472 (50%), Gaps = 26/472 (5%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           LV D   +G +I+  C  G +  A  L +EM+D  ++  + +Y I+I+G C   +MVEA 
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++   M   GV P+ Y+YN+L+DGYCK   +N+A E Y+ ML +      +T+  L+ G 
Sbjct: 405 NILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGF 464

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C +G +  A   +  M K G+ PN    + L+DG  K+G   +A++L  E     ++ + 
Sbjct: 465 CSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNT 524

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N +I GLC + ++  AE L+ KM +     +++TY +L  GYCK GDM++A  + ++
Sbjct: 525 TTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE 584

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +   G  P +  F+SLI G   A        +  EM  + L P+ V + ALI G  K+G+
Sbjct: 585 LENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGD 644

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD--------- 465
           +     LY EM+E  + P++F  SSL+   ++ G+   A N  L+    TD         
Sbjct: 645 LHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA-NLVLQNLVGTDMIPDISAPR 703

Query: 466 --------------GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
                         GG      +++  +I  LC  G+I  A  L +D++      DN TY
Sbjct: 704 LEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTY 763

Query: 512 TTMLRGLLRAKRMLDVMMLLAD-MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++++ G   A   +DV   L D M+ +G+ P+ V    ++ G  ++G+L  A
Sbjct: 764 SSLIHG-CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 249/517 (48%), Gaps = 8/517 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEF 106
           F+ + F  L+ A +  G ++ AL V+ ++  L    ++++CN++LN L + G   +    
Sbjct: 171 FSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAV 230

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E+M   G + D  T  ++    C    V+ AL   +EM   G+E  +V Y  +++G C 
Sbjct: 231 FEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCE 290

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-HHNLQPNVV 225
             +  +A  M  S+   G  PN+ TY  L+ GYC   ++  A     E+  +  L  +  
Sbjct: 291 VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            FG +++G C++G +  A      M    +  N+FVYN +I+G+CK G + EA ++  EM
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD ++YN L+ G C  G +  A      M + G  A  +TYN+L+ G+C  G +
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + AL +   M +KG+ PN ++ S+L+DG  K+G  + A+ L+ E + + L  +   F  +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+GL K   M E   L  +M + +  P + T  +L  G  K G +  A     E  +   
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENL-- 588

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G+ +P    + ++I       Q  K + +  +M +  L P+   Y  ++ G  +   + 
Sbjct: 589 -GF-APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               L  +MI+ G+VP+  I   +V  +   G    A
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 250/529 (47%), Gaps = 33/529 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++ +I  + ++G + EA  +  +   + V P   + N+L++G  KKG  +  +E Y  M
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G  A  +TY  L+   C  G +  AL L+  M+ KGI P  +  + L+ G     K 
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A ++++     G+  N  T+N +++G CK+  +  A E   +M      P+++T+  L
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
             G CK+G++  A      +   G  P I  +N LI GH  A    +   +  EM    +
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+   Y  LI G C  G L  A  L  +M ++G++ N+   +SL+  + ++G  ++A  
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 351 VCSQMTEKGVEPNV--------------------------VTFSSLIDGQCKAGNIDAAM 384
           V   +    + P++                          + ++ +I G CK G I+ A 
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  ++  K  V D   +++LI G S  G +     L   ML   +TP++ T +SLI+GL
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+G +S A++ F  K   T G   SPN + Y  +I   C DG I +A KL   M  + +
Sbjct: 806 CKSGELSRAVSLF--KKLWTKG--ISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGI 861

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            P   TY+ ++ GL     M + + LL  MI+  + P+ V    +++GY
Sbjct: 862 HPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 232/496 (46%), Gaps = 37/496 (7%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           F  + E Y+E           ++ +L+      G +  AL +FDEM   G   ++     
Sbjct: 159 FPHLVEVYKEFSF-----SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNS 213

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++ L     +    ++F  M+  G +P+ +T   +   YCKV  V  ALEF  EM    
Sbjct: 214 ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMG 273

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++ N+V +  +M+G C+VG+   A      +   G  PNI  Y  L+ G+C   N+ EA 
Sbjct: 274 VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAE 333

Query: 280 SLCSEMEK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            +  E+ K  ++  D   +  +I G C +G++E A  LL +M    +  N+  YN +I+G
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMING 393

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YCK G M +A ++  +MT  GV P+  +++SL+DG CK G ++ A   Y  M+       
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT 453

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + + AL+ G    G++ + LRL+  ML+  I P+  + S+L+ G FK+G+   ALN + 
Sbjct: 454 TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWK 513

Query: 459 EK-------------------------------TDKTDGGYCSPNHVLYAAIIQALCYDG 487
           E                                 DK     C P+ + Y  +    C  G
Sbjct: 514 ETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIG 573

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + +AS++ +++ +    P    + +++ G   AK+   V  +L +M   G+ P+ V   
Sbjct: 574 DMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYG 633

Query: 548 VMVRGYQENGDLKSAF 563
            ++ G+ + GDL +A+
Sbjct: 634 ALIAGWCKEGDLHTAY 649



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 159/331 (48%), Gaps = 31/331 (9%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAF---SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIK 96
           LN LE   F P++  F++LI       + G + + L+      + P   A  AL+ G  K
Sbjct: 582 LNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCK 641

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG----------------------- 133
           +G   + +  Y EM+  GLV ++     L+ C   +G                       
Sbjct: 642 EGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISA 701

Query: 134 ---DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
              ++ K  N  D +         +++ I+I GLC   ++ +A+++   +++ G V + +
Sbjct: 702 PRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNF 761

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY++L+ G      V+ A +    ML   L PN+VT+  L+ GLCK GEL  A + F  +
Sbjct: 762 TYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKL 821

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G+ PN   YN LID HCK G + EA  L   M +  I P VFTY+ILI GLC  G +
Sbjct: 822 WTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYM 881

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           E A  LL +M +  +  N VTY +LI GY +
Sbjct: 882 EEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 5/213 (2%)

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +  +F  L+     AG +D A+ ++ EM        +    ++++ L++ G++  T+ ++
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           ++M  A   P  FTV+ +     K   + +AL F  E T          N V Y A++  
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMG----VEVNLVAYHAVMNG 287

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK-MGIVP 541
            C  GQ   A ++   +      P+  TYT +++G    K M +   ++ ++ K   +V 
Sbjct: 288 YCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVV 347

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           D  +   ++ GY + G ++ A R    + +SR+
Sbjct: 348 DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRL 380


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 241/500 (48%), Gaps = 39/500 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++ A   +  ++ A  + R +     +P       L++ L K+ + D   +  
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM L G   DV T+  +I   C    V++   L D MI KG  P  + Y  L+HGLC  
Sbjct: 269 EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKT 328

Query: 168 NKMVEAESM--------------------------------FRSMRECGVVPNLYTYNAL 195
            ++ EA+++                                +  M   G VP+++T++ L
Sbjct: 329 CRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTL 388

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++G CK      ALE  ++M     +PN+ T+ +L+DG CK G+L  AG     M   G 
Sbjct: 389 VNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGF 448

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N   YN LI   CK G + EA+ +  EM      PD+FT+N LI GLC V ++E A  
Sbjct: 449 SLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALA 508

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L + M  EG++AN VT+N+LI  + + G++++AL + + M  +G   + +T++ LI   C
Sbjct: 509 LYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALC 568

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G ++  +GL+ EM+ K L P ++    LI+G    G +   L   ++M+    +P + 
Sbjct: 569 KTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIV 628

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SLI+GL K GRI  ALN F    +K       P+ + Y  +I  LC +G    A  L
Sbjct: 629 TYNSLINGLCKRGRIQEALNLF----EKLQAEGIQPDSITYNTLICWLCREGAFDDACFL 684

Query: 496 FSDMRSDNLRPDNCTYTTML 515
                 +   P++ T+  ++
Sbjct: 685 LYRGVENGFVPNDVTWNILV 704



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 259/546 (47%), Gaps = 73/546 (13%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+ ++ N +L+ L+           + +M+  G+  +  T+G+++   C   +V  A  L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  +IY  LI  L   +++ EA  +   M   G  P++ T+N ++ G+C+
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV------------------------ 237
           +  V    +    M+     PN +T+G LM GLCK                         
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTL 352

Query: 238 -------GELRAAGNF-FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
                  G L  A  F +  M   G  P++F ++ L++G CK G    A+ L ++M+   
Sbjct: 353 VNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++ TY ILI G C  GQLE A  +L++M  +G   N V YN+LI   CK G + +AL
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M+ KG +P++ TF+SLI G C+   ++ A+ LY +MV++ ++ + V F  LI   
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532

Query: 410 SKDGNMKETLR-----------------------------------LYKEMLEAKITPSV 434
            + G ++E L+                                   L++EM+   +TPS+
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI+G    G++ NAL F     D    G+ SP+ V Y ++I  LC  G+I +A  
Sbjct: 593 ITCNILINGFCTAGKVHNALEFM---RDMIHRGF-SPDIVTYNSLINGLCKRGRIQEALN 648

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR--G 552
           LF  ++++ ++PD+ TY T++  L R     D   LL   ++ G VP+ V   ++V   G
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFG 708

Query: 553 YQENGD 558
            Q N +
Sbjct: 709 KQSNSE 714



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 209/404 (51%), Gaps = 5/404 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF-YEE 109
           N   +  L+    +   I+EA  +  K+   P +   N L+NG ++ G+ +    F Y++
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVPG-PNVVHFNTLVNGFVRNGRLNEATAFVYDK 372

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G V DV T+  L++  C +G    AL L ++M  KG +P +  YTILI G C + +
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  + R M   G   N   YNAL+   CK   ++ AL+ + EM     +P++ TF  
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ GLC+V E+  A   +  M   GV  N   +N LI    + G + EA+ L ++M    
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              D  TYN LIK LC  G +E   GL ++M ++G+  +++T N LI+G+C  G +  AL
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
                M  +G  P++VT++SLI+G CK G I  A+ L+ ++  + + PD + +  LI  L
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWL 672

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            ++G   +   L    +E    P+  T + L++     G+ SN+
Sbjct: 673 CREGAFDDACFLLYRGVENGFVPNDVTWNILVYNF---GKQSNS 713



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 220/486 (45%), Gaps = 36/486 (7%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           +Y V++D          A N+F +M+ KG+ P    + +++  LC  N++  A  + R M
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDM 236

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            + G VPN   Y  L+D   K   V+ AL+   EM      P+V TF  ++ G C++  +
Sbjct: 237 TKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRV 296

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI---------- 290
                    M   G  PN   Y  L+ G CK   + EA +L S++    +          
Sbjct: 297 LEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGF 356

Query: 291 ----------------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
                                  PDVFT++ L+ GLC  G    A  L+  M  +G   N
Sbjct: 357 VRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN 416

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           + TY  LIDG+CK+G +E+A  +  +M  KG   N V +++LI   CK G I  A+ ++ 
Sbjct: 417 LNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFG 476

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K   PD+  F +LI GL +   M++ L LY++M+   +  +  T ++LIH   + G
Sbjct: 477 EMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRG 536

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            I  AL    +   +     C  + + Y  +I+ALC  G + K   LF +M    L P  
Sbjct: 537 EIQEALKLVNDMLFRG----CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            T   ++ G   A ++ + +  + DMI  G  PD V    ++ G  + G ++ A    E 
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 569 LKESRI 574
           L+   I
Sbjct: 653 LQAEGI 658



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 194/373 (52%), Gaps = 4/373 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEAL-WVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
           ++P  N   F+TL+  F   G + EA  +VY K+     +P +   + L+NGL KKG F 
Sbjct: 340 KVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG 399

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           S  E   +M   G   ++ TY +LID  C +G + +A  +  EM+ KG     V Y  LI
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALI 459

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC   K+ EA  MF  M   G  P+++T+N+L+ G C+V ++  AL  Y +M+   + 
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N VTF  L+    + GE++ A      M   G   +   YN LI   CK G + + + L
Sbjct: 520 ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGL 579

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM +  ++P + T NILI G C  G++  A   ++ M   G   ++VTYNSLI+G CK
Sbjct: 580 FEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +++AL++  ++  +G++P+ +T+++LI   C+ G  D A  L    V    VP+ V 
Sbjct: 640 RGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVT 699

Query: 402 FTALIDGLSKDGN 414
           +  L+    K  N
Sbjct: 700 WNILVYNFGKQSN 712



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 198/384 (51%), Gaps = 19/384 (4%)

Query: 187 PNLYTYNALMD----GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
           P+  +YN ++D    G C     N     +++ML   + PN  TFG++M  LC V E+  
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASN----VFYDMLSKGVSPNDYTFGLVMKALCMVNEVDN 228

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M K G  PN  +Y  LID   K   + EA+ L  EM      PDV T+N +I 
Sbjct: 229 ACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIY 288

Query: 303 GLCGVGQ-LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           G C + + LEGA+ L+ +M  +G   N +TY  L+ G CK   +++A ++ S++      
Sbjct: 289 GFCRLNRVLEGAK-LVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----G 343

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMG-LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           PNVV F++L++G  + G ++ A   +Y +M+    VPDV  F+ L++GL K G     L 
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  +M      P++ T + LI G  K G++  A     E   K   G+ S N V Y A+I
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK---GF-SLNTVGYNALI 459

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            ALC  G+I +A  +F +M S   +PD  T+ +++ GL R   M D + L  DM+  G++
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519

Query: 541 PDAVINQVMVRGYQENGDLKSAFR 564
            ++V    ++  +   G+++ A +
Sbjct: 520 ANSVTFNTLIHAFLRRGEIQEALK 543



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 171/339 (50%), Gaps = 3/339 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            FSTL+    + G    AL +   ++     P +     L++G  KKG+ +       EM
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   + V Y  LI   C  G + +AL++F EM  KG +P +  +  LI GLC  ++M
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A +++R M   GV+ N  T+N L+  + +  ++  AL+  ++ML      + +T+  L
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +      F  M + G+ P+I   N LI+G C AG +  A+    +M     
Sbjct: 564 IKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGF 623

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPD+ TYN LI GLC  G+++ A  L +K+  EGI  + +TYN+LI   C+EG  + A  
Sbjct: 624 SPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACF 683

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +  +  E G  PN VT++ L+    K  N +     Y +
Sbjct: 684 LLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQ 722


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 266/540 (49%), Gaps = 16/540 (2%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G   EAL VY+++    + P+++  +AL+  L ++G    +    EEM   GL  ++ TY
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            + I        +  A  +F EM D+G  P V+ YT+LI  LC   K+ +A+ ++  MR 
Sbjct: 274 TICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRA 333

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
               P+  TY  LMD + KV D+     F++EM      P+VVT+ +L++ LCK G++  
Sbjct: 334 SSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDR 393

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A +    M   G+FPN+  YN +I G  KA  L EA+ L   ME   + P  F+Y + I 
Sbjct: 394 AFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
                G    A    + M K GI+ ++   N+ +    + G + +A  + + + + G+ P
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + VT++ L+    KAG ID A  L +EM+ K   PDV++  +LI+ L K G +    +++
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             +   K+ P+V T + L+ GL K G+I  AL  F   T+      C PN + + +++  
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG----CPPNTITFNSLLDC 629

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           L  +  +  A K+F  M   N  PD  TY T++ GL+R  R +D        +K  + PD
Sbjct: 630 LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR-IDYAFWFFHQMKKFLSPD 688

Query: 543 AVINQVMVRGYQENGDLKSAFR-CSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQDL 601
            V    ++ G   +G ++ A +   EF+ ++ +        T   F G L   +  E ++
Sbjct: 689 YVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL-------QTNSQFWGELMECILTEAEI 741



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 171/616 (27%), Positives = 267/616 (43%), Gaps = 86/616 (13%)

Query: 25   LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVY---RKIE 79
            LLK+R+           L ++E     P+ FS ++    + + G   +A+  +   +K  
Sbjct: 420  LLKARRLDEA----LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475

Query: 80   VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            ++P+I ACNA L  L + G+     + + ++  CGL  D VTY +L+ C    G + KA 
Sbjct: 476  IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535

Query: 140  NLFDEMIDKGIEP-----------------------------------TVVIYTILIHGL 164
             L  EMI KG EP                                   TVV Y IL+ GL
Sbjct: 536  QLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGL 595

Query: 165  CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
              E K+++A  +F SM E G  PN  T+N+L+D   K   V+ AL+ +  M   N  P+V
Sbjct: 596  GKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDV 655

Query: 225  VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            +T+  ++ GL + G +  A  FF  M KF + P+      LI G  + G + +A+ +  E
Sbjct: 656  LTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714

Query: 285  ---------------------MEKFEISPDVFTYNIL---------------IKGLCGVG 308
                                 + + EI   +    IL               IK LC   
Sbjct: 715  FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774

Query: 309  QLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
            +   A+ +  K  K  GI   + +YN L+DG       EKAL +   M   G  PN  T+
Sbjct: 775  KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834

Query: 368  SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            + L+D   K+  I+    LY+EM  +   P+ +    +I  L K  N+ + L LY E++ 
Sbjct: 835  NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894

Query: 428  AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
               +P+  T   LI GL K GR   A+  F E  D      C PN V+Y  +I      G
Sbjct: 895  GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG----CGPNSVIYNILINGFGKSG 950

Query: 488  QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +I  A +LF  M  + +RPD  +YT ++  L    R+ + +    ++   G+ PD V   
Sbjct: 951  EIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYN 1010

Query: 548  VMVRGYQENGDLKSAF 563
             ++ G  ++  L  A 
Sbjct: 1011 FIINGLGKSRRLDEAL 1026



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 213/441 (48%), Gaps = 13/441 (2%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA----LM 196
           +FD M  K I   +  Y  +   L  +  +  A    R M E G + N Y+YN     L+
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+C     N AL+ Y  M+   ++P++ T+  LM  L + G+ R   N    M   G+ 
Sbjct: 213 PGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PNI+ Y   I    +A  + +A  +  EM+     PDV TY +LI  LC  G+L+ A+ L
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             KM       + VTY +L+D + K GD+E      ++M   G  P+VVT++ LI+  CK
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G++D A  +   M  K + P++  +  +I GL K   + E L L + M    + P+ F+
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
               I    K+G  + A++ F  +T K  G    P+     A +  L   G+I +A  +F
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTF--ETMKKRG--IMPSIAACNASLYTLAETGRISEAEDIF 503

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           +D+    L PD+ TY  +++   +A ++     LL++MI  G  PD +I   ++    + 
Sbjct: 504 NDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKA 563

Query: 557 GDLKSAFRCSEFLKESRIGSS 577
           G + +A++    LK  ++  +
Sbjct: 564 GRVDAAWKMFGRLKNLKLAPT 584



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 225/470 (47%), Gaps = 45/470 (9%)

Query: 51   NPSV--FSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVW-- 104
            NP V  ++T+I      G I+ A W + +++  + P       L+ G+++ G+ +     
Sbjct: 652  NPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKV 711

Query: 105  --------------EFYEEMVLCGL----VADVVTYGVLIDC----------------CC 130
                          +F+ E++ C L    + + +++  ++ C                 C
Sbjct: 712  VMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLC 771

Query: 131  GQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
             +   + A N+FD+     GI PT+  Y  L+ GL   N   +A  +F  M+  G  PN 
Sbjct: 772  KRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNN 831

Query: 190  YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +TYN L+D + K   +N+  + Y EM     +PN +T  +++  L K   L  A + +  
Sbjct: 832  FTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYE 891

Query: 250  MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
            +      P    Y  LIDG  KAG   +AM +  EM  +   P+   YNILI G    G+
Sbjct: 892  LMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951

Query: 310  LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            ++ A  L +KM KEGI  ++ +Y  L++  C  G +++A+    ++   G++P+ V+++ 
Sbjct: 952  IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011

Query: 370  LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
            +I+G  K+  +D A+ L++EM  + + PD+  + ALI  L   G +   +++Y+E+    
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071

Query: 430  ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            + PSVFT ++LI G   +G    A + F  K     G  CSPN   +A +
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVF--KKMMVVG--CSPNTETFAQL 1117



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 17/493 (3%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           ACN +L  L ++ + + +   ++ M    +  ++ TY  +      +G + +A     +M
Sbjct: 133 ACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKM 192

Query: 146 IDKGIEPTVVIYTILIH----GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + G       Y  LIH    G CN     EA  +++ M   G+ P++ TY+ALM    +
Sbjct: 193 TEVGFILNAYSYNGLIHLLLPGFCN-----EALKVYKRMISEGMKPSMKTYSALMVALGR 247

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D  + +    EM    L+PN+ T+ + +  L +   +  A   F  M   G  P++  
Sbjct: 248 RGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVIT 307

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LID  C AG L +A  L  +M     SPD  TY  L+     VG LE  +    +M 
Sbjct: 308 YTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEME 367

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   +VVTY  LI+  CK GD+++A  +   MT KG+ PN+ T++++I G  KA  +D
Sbjct: 368 VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLD 427

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L   M    + P    +   ID   K G+  + +  ++ M +  I PS+   ++ +
Sbjct: 428 EALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASL 487

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYC--SPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           + L + GRIS A + F       D   C  SP+ V Y  +++     GQI KA++L S+M
Sbjct: 488 YTLAETGRISEAEDIF------NDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM 541

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            S    PD     +++  L +A R+     +   +  + + P  V   +++ G  + G +
Sbjct: 542 ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKI 601

Query: 560 KSAFRCSEFLKES 572
             A      + ES
Sbjct: 602 LKALELFGSMTES 614



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 180/341 (52%)

Query: 114  GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            G+   + +Y  L+D   G     KAL LF++M   G  P    Y +L+       ++ + 
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 174  ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
              ++  MR  G  PN  T+N ++    K  ++N+AL+ Y+E++  +  P   T+G L+DG
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 234  LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            L K G    A   F  M  +G  PN  +YN LI+G  K+G +  A  L  +M K  I PD
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 294  VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
            + +Y IL++ LC  G+++ A    +++   G+  + V+YN +I+G  K   +++ALS+ S
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 354  QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            +M  +G+ P++ T+++LI     AG +D A+ +Y E+ +  L P V  + ALI G S  G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 414  NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            N  +   ++K+M+    +P+  T + L +   + G + N  
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 251/564 (44%), Gaps = 47/564 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + ++LI    + G ++ A  ++   + +++ P +   N LL GL K+GK     E +  M
Sbjct: 552  IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSM 611

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G   + +T+  L+DC      V  AL +F  M      P V+ Y  +I+GL  E ++
Sbjct: 612  TESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI 671

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGV 229
              A   F  M++  + P+  T   L+ G  +   V  A++   E +H   LQ N   +G 
Sbjct: 672  DYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGE 730

Query: 230  LMDG-----------------------------------LCKVGELRAAGNFFVHMAK-F 253
            LM+                                    LCK  +   A N F    K  
Sbjct: 731  LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL 790

Query: 254  GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            G+ P +  YNCL+DG   +    +A+ L  +M+     P+ FTYN+L+       ++   
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L  +M   G   N +T+N +I    K  ++ KAL +  ++      P   T+  LIDG
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              KAG  + AM ++ EM+     P+ V++  LI+G  K G +     L+K+M++  I P 
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + + + L+  L   GRI  A+ +F E   K  G    P+ V Y  II  L    ++ +A 
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEEL--KLTG--LDPDTVSYNFIINGLGKSRRLDEAL 1026

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             LFS+M++  + PD  TY  ++  L  A ++   + +  ++  +G+ P       ++RG+
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGH 1086

Query: 554  QENGDLKSAFRCSEFLKESRIGSS 577
              +G+   AF  S F K   +G S
Sbjct: 1087 SLSGNKDQAF--SVFKKMMVVGCS 1108



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 162/298 (54%)

Query: 88   NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            N LL+   K  + + +++ Y EM   G   + +T+ ++I       ++ KAL+L+ E++ 
Sbjct: 835  NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894

Query: 148  KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
                PT   Y  LI GL    +  +A  +F  M + G  PN   YN L++G+ K  +++ 
Sbjct: 895  GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDF 954

Query: 208  ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            A E + +M+   ++P++ ++ +L++ LC  G +  A  +F  +   G+ P+   YN +I+
Sbjct: 955  ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIIN 1014

Query: 268  GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            G  K+  L EA+SL SEM+   ISPD++TYN LI  L   G+++ A  + +++   G+  
Sbjct: 1015 GLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEP 1074

Query: 328  NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            +V TYN+LI G+   G+ ++A SV  +M   G  PN  TF+ L +   +AG +    G
Sbjct: 1075 SVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFG 1132



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 7/288 (2%)

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           F    + S++  F  + D   Y  +++ L    ++E    +   M K+ I  N+ TY ++
Sbjct: 115 FSYFKIVSQLTNFVHTTDACNY--MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTI 172

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
                 +G + +A     +MTE G   N  +++ LI      G  + A+ +Y  M+ + +
Sbjct: 173 FKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGM 231

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P +  ++AL+  L + G+ ++ + L +EM    + P+++T +  I  L +  RI +A  
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E  D+     C P+ + Y  +I ALC  G++ KA +L+  MR+ +  PD  TY T++
Sbjct: 292 IFKEMDDEG----CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLM 347

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
               +   +  V     +M   G  PD V   +++    ++GD+  AF
Sbjct: 348 DKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            N  +++ LI  F + G I+ A  +++K+    + P +++   L+  L   G+ D   +++
Sbjct: 935  NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EE+ L GL  D V+Y  +I+       + +AL+LF EM ++GI P +  Y  LI  L   
Sbjct: 995  EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054

Query: 168  NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             K+  A  M+  ++  G+ P+++TYNAL+ G+    + ++A   + +M+     PN  TF
Sbjct: 1055 GKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114

Query: 228  GVLMDGLCKVG 238
              L +   + G
Sbjct: 1115 AQLPNKYPRAG 1125


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/391 (35%), Positives = 202/391 (51%), Gaps = 6/391 (1%)

Query: 73  WVYRKIEVL------PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
           WV + IE +      P     N ++  L K GK         EM+  G+  D V Y  LI
Sbjct: 206 WVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 265

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
           D  C  G+V  A  LFDEM  + I P  + YT +I GLC   +++EA+ +F  M    + 
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  TY AL+DGYCK   +  A   +++ML   L PN+VT+  L DGLCK GE+  A   
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M + G+  NI+ YN L++G CKAGN+ +A+ L  +ME     PD  TY  L+   C 
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
             ++  A  LL++M    +   VVT+N L++G+C  G +E    +   M EKG+ PN  T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++SLI   C   N+ A   +Y  M  K +VPD   +  LI G  K  NMKE   L+++M+
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 565

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
                 +V + ++LI G +K  +   A   F
Sbjct: 566 GKGFNLTVSSYNALIKGFYKRKKFLEARELF 596



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/380 (36%), Positives = 197/380 (51%), Gaps = 3/380 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K NP  ++ +I+   + G + EA  V R++    + P       L++G  K G   S + 
Sbjct: 220 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM    +  D +TY  +I   C  G VM+A  LF EM+ K +EP  V YT LI G C
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E KM EA S+   M + G+ PN+ TY AL DG CK  +V+ A E  HEM    L+ N+ 
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++GLCK G +  A      M   G  P+   Y  L+D +CK+  +  A  L  +M
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              E+ P V T+N+L+ G C  G LE  E LL+ M ++GI+ N  TYNSLI  YC   +M
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                +   M  KGV P+  T++ LI G CKA N+  A  L+ +MV K     V  + AL
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579

Query: 406 IDGLSKDGNMKETLRLYKEM 425
           I G  K     E   L+++M
Sbjct: 580 IKGFYKRKKFLEARELFEQM 599



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 226/439 (51%), Gaps = 11/439 (2%)

Query: 80  VLPAIQACNAL-------LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           +L ++ +CN         L+G+    K + V +  EEM + GL  +  TY  +I   C  
Sbjct: 177 LLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 236

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G V +A  +  EMI +GI P  VIYT LI G C    +  A  +F  M++  + P+  TY
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            A++ G C+   V  A + +HEM+   L+P+ VT+  L+DG CK G+++ A +    M +
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 356

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PNI  Y  L DG CK G +  A  L  EM +  +  +++TYN L+ GLC  G ++ 
Sbjct: 357 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 416

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L++ M   G   + VTY +L+D YCK  +M +A  +  QM ++ ++P VVTF+ L++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C +G ++    L   M+ K ++P+   + +LI       NM+ T  +Y+ M    + P
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
              T + LI G  K   +  A  +FL + D    G+ +     Y A+I+      + L+A
Sbjct: 537 DGNTYNILIKGHCKARNMKEA--WFLHR-DMVGKGF-NLTVSSYNALIKGFYKRKKFLEA 592

Query: 493 SKLFSDMRSDNLRPDNCTY 511
            +LF  MR + L  D   Y
Sbjct: 593 RELFEQMRREGLVADREIY 611



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 214/426 (50%), Gaps = 17/426 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE-------SMFRSMRECGVVPNLY 190
           A  LFD+M++ G+  +V    + I  L  +   ++          +   M+  G+ PN Y
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN ++   CK   V  A     EM+   + P+ V +  L+DG CK+G + +A   F  M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K  + P+   Y  +I G C+ G + EA  L  EM    + PD  TY  LI G C  G++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L  +M + G+  N+VTY +L DG CK G+++ A  +  +M  KG+E N+ T++SL
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           ++G CKAGNID A+ L  +M +    PD V +T L+D   K   M     L ++ML+ ++
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 431 TPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            P+V T + L++G   +G + +    L + LEK          PN   Y ++I+  C   
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-------IMPNATTYNSLIKQYCIRN 517

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +   ++++  M +  + PD  TY  +++G  +A+ M +   L  DM+  G         
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 548 VMVRGY 553
            +++G+
Sbjct: 578 ALIKGF 583



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 189/367 (51%), Gaps = 8/367 (2%)

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+   EM    L+PN  T+  ++  LCK G++  A      M   G+ P+  +Y  LIDG
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK GN+  A  L  EM+K +ISPD  TY  +I GLC  G++  A+ L  +M  + +  +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            VTY +LIDGYCKEG M++A S+ +QM + G+ PN+VT+++L DG CK G +D A  L  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K L  ++  + +L++GL K GN+ + ++L K+M  A   P   T ++L+    K+ 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +  A     +  D+       P  V +  ++   C  G +    KL   M    + P+ 
Sbjct: 448 EMVRAHELLRQMLDRE----LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TY ++++       M     +   M   G+VPD     ++++G+ +  ++K A+    F
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW----F 559

Query: 569 LKESRIG 575
           L    +G
Sbjct: 560 LHRDMVG 566



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 192/377 (50%), Gaps = 3/377 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++TLI  F ++G++  A  ++   +K ++ P      A++ GL + G+     + + EM
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V   L  D VTY  LID  C +G + +A +L ++M+  G+ P +V YT L  GLC   ++
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M   G+  N+YTYN+L++G CK  ++++A++   +M      P+ VT+  L
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           MD  CK  E+  A      M    + P +  +N L++G C +G L +   L   M +  I
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TYN LIK  C    +     + + M  +G++ +  TYN LI G+CK  +M++A  
Sbjct: 500 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 559

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M  KG    V ++++LI G  K      A  L+ +M  + LV D  ++    D   
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINY 619

Query: 411 KDGNMKETLRLYKEMLE 427
            +G M+ TL L  E +E
Sbjct: 620 DEGKMELTLELCDEAIE 636



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 163/301 (54%), Gaps = 4/301 (1%)

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + L  EM+   + P+ +TYN +I  LC  G++  AE +L++M  EGI  + V Y +LIDG
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +CK G++  A  +  +M ++ + P+ +T++++I G C+ G +  A  L+ EMV K L PD
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            V +TALIDG  K+G MKE   L+ +ML+  +TP++ T ++L  GL K G +  A     
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   K        N   Y +++  LC  G I +A KL  DM      PD  TYTT++   
Sbjct: 388 EMCRKG----LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            +++ M+    LL  M+   + P  V   V++ G+  +G L+   +  +++ E  I  + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 579 T 579
           T
Sbjct: 504 T 504



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 39/285 (13%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           I   N+L+NGL K G  D   +  ++M + G   D VTY  L+D  C   ++++A  L  
Sbjct: 398 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M+D+ ++PTVV + +L++G C    + + E + + M E G++PN  TYN+L+  YC   
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV-- 261
           ++    E Y  M    + P+  T+ +L+ G CK   ++ A  +F+H    G   N+ V  
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA--WFLHRDMVGKGFNLTVSS 575

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G  K     EA  L                                    ++M 
Sbjct: 576 YNALIKGFYKRKKFLEAREL-----------------------------------FEQMR 600

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           +EG++A+   YN   D    EG ME  L +C +  EK +  ++ T
Sbjct: 601 REGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 7/205 (3%)

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
            S  +DG   A   +  + L  EM IK L P+   +  +I  L K G + E  R+ +EM+
Sbjct: 191 LSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 250

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              I P     ++LI G  K G +S+A   F    D+      SP+ + Y A+I  LC  
Sbjct: 251 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF----DEMQKRKISPDFITYTAVICGLCQT 306

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++++A KLF +M    L PD  TYT ++ G  +  +M +   L   M++MG+ P+ V  
Sbjct: 307 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 366

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKE 571
             +  G  + G++ +A   +E L E
Sbjct: 367 TALADGLCKCGEVDTA---NELLHE 388


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 244/469 (52%), Gaps = 4/469 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N +L+ L+K  +F +     + +   G+ +D+VT  +LI+C C  G +  + ++
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              ++ +G  P V+  T LI GLC   ++ +A      +       +  +Y  L++G CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   A++    +   +++P+VV + +++D LCK   +  A N +  M    ++PN+  
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI G C  G L EA++L +EM+   I+PDV+T++ILI  L   G+++ A+ +L  M 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K  +  +VVTYNSL+DGY    +++ A  V + M + GV P V +++ +IDG CK   +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ EM  K+++P+ + F +LIDGL K G +     L  +M +      V T SSLI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L KN  +  A+  F     K       P+   Y  +I  LC  G++  A ++F  +  
Sbjct: 427 DALCKNCHLDQAIALF----KKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLI 482

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
                D  TYT M+ G  +A    + + LL+ M   G +P+A+   +++
Sbjct: 483 KGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIII 531



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 234/449 (52%), Gaps = 9/449 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            + LI  F  +G I  +  V   I      P +     L+ GL  +G+     +F++++V
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
                 D ++YG LI+  C  G+   A+ L   + ++ I+P VV+Y I+I  LC +NK+V
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLC-KNKLV 225

Query: 172 -EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA +++  M    + PN+ TY  L+ G+C +  +  A+   +EM   N+ P+V TF +L
Sbjct: 226 GEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSIL 285

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D L K G+++AA      M K  V P++  YN L+DG+     +  A  + + M +  +
Sbjct: 286 IDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGV 345

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P V +Y I+I GLC    ++ A  L ++M  + ++ N +T+NSLIDG CK G +     
Sbjct: 346 TPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWD 405

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M ++    +V+T+SSLID  CK  ++D A+ L+ +M+ + + PD+  +T LIDGL 
Sbjct: 406 LVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC 465

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G +K    +++ +L       + T + +I G  K G    AL        K +   C 
Sbjct: 466 KGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL----SKMEDNGCI 521

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDM 499
           PN + +  II AL    +  KA KL  +M
Sbjct: 522 PNAITFDIIICALFEKDENDKAEKLLREM 550



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 228/420 (54%), Gaps = 4/420 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L   +  KGI   +V   ILI+  C+  ++  + S+  ++ + G  P++ T   L+ 
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIK 147

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C   +V +AL+F+ +++    Q + +++G L++GLCK+GE +AA     ++ +  + P
Sbjct: 148 GLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKP 207

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ +YN +ID  CK   + EA +L SEM   +I P+V TY  LI G C +G L  A  LL
Sbjct: 208 DVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALL 267

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  + I  +V T++ LID   KEG M+ A  V + M +  V+P+VVT++SL+DG    
Sbjct: 268 NEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLV 327

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +  A  ++  M    + P V  +T +IDGL K   + E + L++EM    + P+  T 
Sbjct: 328 NEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITF 387

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLI GL K+GRI+   +   +  D++       + + Y+++I ALC +  + +A  LF 
Sbjct: 388 NSLIDGLCKSGRIAYVWDLVDKMRDRSQLA----DVITYSSLIDALCKNCHLDQAIALFK 443

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M +  ++PD  TYT ++ GL +  R+     +   ++  G   D     VM+ G+ + G
Sbjct: 444 KMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAG 503



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 203/432 (46%), Gaps = 4/432 (0%)

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
              D   A+ LF+ M+     P    +  ++  L    +   A S+ + +   G+  +L 
Sbjct: 46  NHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLV 105

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T N L++ +C +  +  +      +L     P+V+T   L+ GLC  GE++ A  F   +
Sbjct: 106 TLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDV 165

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
                  +   Y  LI+G CK G    A+ L   +E+  I PDV  YNI+I  LC    +
Sbjct: 166 VALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLV 225

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A  L  +M  + I  NVVTY +LI G+C  G + +A+++ ++M  K + P+V TFS L
Sbjct: 226 GEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSIL 285

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           ID   K G + AA  +   M+   + PDVV + +L+DG      +K    ++  M ++ +
Sbjct: 286 IDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGV 345

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           TP V + + +I GL K   +  A++ F E   K       PN + + ++I  LC  G+I 
Sbjct: 346 TPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN----VIPNTITFNSLIDGLCKSGRIA 401

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
               L   MR  +   D  TY++++  L +   +   + L   MI   I PD     +++
Sbjct: 402 YVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILI 461

Query: 551 RGYQENGDLKSA 562
            G  + G LK A
Sbjct: 462 DGLCKGGRLKIA 473



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 152/318 (47%), Gaps = 4/318 (1%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P  F +N ++    K      A+SL   ++   I+ D+ T NILI   C +GQ+  +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  + K G   +V+T  +LI G C  G+++KAL     +     + + +++ +LI+G CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G   AA+ L   +  +S+ PDVV++  +ID L K+  + E   LY EM   +I P+V T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI+G    G +  A+    E   K      +P+   ++ +I AL  +G++  A  + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKN----INPDVYTFSILIDALGKEGKMKAAKIVL 302

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           + M    ++PD  TY +++ G      +     +   M + G+ P      +M+ G  + 
Sbjct: 303 AVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKT 362

Query: 557 GDLKSAFRCSEFLKESRI 574
             +  A    E +K   +
Sbjct: 363 KMVDEAISLFEEMKHKNV 380



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 31/255 (12%)

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           Y    D   A+++ ++M      P    F++++    K      A+ L   +  K +  D
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF- 457
           +V    LI+     G +  +  +   +L+    P V T+++LI GL   G +  AL F  
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 458 ----LE-KTDKTD-----GGYC--------------------SPNHVLYAAIIQALCYDG 487
               LE + D+        G C                     P+ V+Y  II +LC + 
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            + +A  L+S+M +  + P+  TYTT++ G      +++ + LL +M    I PD     
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 548 VMVRGYQENGDLKSA 562
           +++    + G +K+A
Sbjct: 284 ILIDALGKEGKMKAA 298



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + + L+  ML  +  P  F  ++++  L K  R   A++     +   D    + + V  
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISL----SKHLDFKGITSDLVTL 107

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I   C+ GQI  +  + + +      PD  T TT+++GL     +   +    D++ 
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +    D +    ++ G  + G+ K+A +    L+E  I
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSI 205


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 253/484 (52%), Gaps = 31/484 (6%)

Query: 37  SVFNAL--NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S+FN L   +   P F    F+ ++ +  +  H    L + +K+E   + P +  CN L+
Sbjct: 72  SLFNRLLRQNPTPPAFE---FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILI 128

Query: 92  NGLIKKG----KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
               + G    +    + F++++V  G   D V+YG LI   C  G+   AL+L   +  
Sbjct: 129 YCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDG 188

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K ++   V+Y  +I+G+C +  + +A  ++  M   G+ PN+ TY+AL+ G+  V  +  
Sbjct: 189 KLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKD 248

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A++ +++++  N++P+  TF +L+DG CK  +++     F  M K G+ P++  YN L+D
Sbjct: 249 AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMD 308

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+C    +  A S+ + M +  ++PD+ +YNILI G C + +++ A  L  +M+ + I+ 
Sbjct: 309 GYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP 368

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVTYNSLIDG  K G +  AL +  QM ++GV PN++T++S+ID   K   +D A+ L 
Sbjct: 369 NVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALI 428

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           T+   + + P +  +T LIDGL K      T+  Y  M               IHG  K 
Sbjct: 429 TKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVM---------------IHGFCKK 473

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G    AL+   +  D +    C PN V Y   I++L  + +  KA KLF +M +  L   
Sbjct: 474 GLFDEALSLLSKMKDSS----CIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNR 529

Query: 508 NCTY 511
           + +Y
Sbjct: 530 SASY 533



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 229/452 (50%), Gaps = 28/452 (6%)

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
              DV  A++LF+ ++ +   P    +  ++  L          S+ + M   G+ PNL+
Sbjct: 63  SNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLF 122

Query: 191 TYNALMDGYCKVA----DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
             N L+  +C++      +++A  F+ +++      + V++G L+ GLCKVGE RAA + 
Sbjct: 123 NCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 182

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              +    V  N  +YN +I G CK  ++ +A  L SEM    ISP+V TY+ LI G   
Sbjct: 183 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 242

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           VG+L+ A  L  K+  E I  +  T+N L+DG+CK+  M++  +V + M ++G+ P+VVT
Sbjct: 243 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 302

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++SL+DG C    ++ A  ++  M    + PD+  +  LI+G  K   + + + L+ EM 
Sbjct: 303 YNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 362

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              I P+V T +SLI GL K+GRIS AL    +  D+       PN + Y +II AL   
Sbjct: 363 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG----VPPNILTYNSIIDALFKT 418

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA-------------------KRMLD- 526
            Q+ KA  L +  +   ++P   TYT ++ GL +                    K + D 
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDE 478

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            + LL+ M     +P+AV  ++ +R   +N +
Sbjct: 479 ALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 240/520 (46%), Gaps = 64/520 (12%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDS 102
           + K N   +S+    F     +++A+ ++    R+    PA +  N +L  L+K   + +
Sbjct: 46  LTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEF-NKILGSLVKSKHYHT 104

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQG----DVMKALNLFDEMIDKGIEPTVVIYT 158
           V    ++M   G+  ++    +LI C C  G     + +A    D+++  G     V Y 
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LIHGL                                   CKV +   AL+    +   
Sbjct: 165 TLIHGL-----------------------------------CKVGETRAALDLLQRVDGK 189

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            +Q N V +  ++ G+CK   +  A + +  M   G+ PN+  Y+ LI G    G L +A
Sbjct: 190 LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDA 249

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + L +++    I PD +T+NIL+ G C   +++  + +   M K+GI+ +VVTYNSL+DG
Sbjct: 250 IDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG 309

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YC   ++  A S+ + M + GV P++ +++ LI+G CK   +D AM L+ EM  K+++P+
Sbjct: 310 YCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 369

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV + +LIDGLSK G +   L+L  +M +  + P++ T +S+I  LFK  ++  A+    
Sbjct: 370 VVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALIT 429

Query: 459 EKTD------------------KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +  D                  K +G   + N   Y  +I   C  G   +A  L S M+
Sbjct: 430 KFKDQGIQPSMYTYTILIDGLCKVEGYDITVN--TYNVMIHGFCKKGLFDEALSLLSKMK 487

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             +  P+  TY   +R LL          L  +MI  G++
Sbjct: 488 DSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 8/359 (2%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N  +Y++    +    DV+ A+  ++ +L  N  P    F  ++  L K        +  
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAG----NLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
             M   G+ PN+F  N LI   C+ G     + +A     ++       D  +Y  LI G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC VG+   A  LLQ++  + +  N V YN++I G CK+  +  A  + S+M  KG+ PN
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+S+LI G    G +  A+ L+ +++++++ PD   F  L+DG  KD  MKE   ++ 
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M++  I P V T +SL+ G      ++ A + F    +    G  +P+   Y  +I   
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIF----NTMAQGGVNPDIRSYNILINGF 345

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           C   ++ KA  LF++M   N+ P+  TY +++ GL ++ R+   + L+  M   G+ P+
Sbjct: 346 CKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 161/331 (48%), Gaps = 8/331 (2%)

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
            ++  A + F  + +    P  F +N ++    K+ +    +SL  +ME   I P++F  
Sbjct: 65  NDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124

Query: 298 NILIKGLCGVG----QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           NILI   C +G    Q+  A     K+   G   + V+Y +LI G CK G+   AL +  
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++  K V+ N V ++++I G CK  +++ A  LY+EMV K + P+VV ++ALI G    G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +K+ + L+ +++   I P  +T + L+ G  K+ ++      F     +       P+ 
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG----IIPDV 300

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y +++   C   ++  A  +F+ M    + PD  +Y  ++ G  + K++   M L  +
Sbjct: 301 VTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 360

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M    I+P+ V    ++ G  ++G +  A +
Sbjct: 361 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 20/205 (9%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P I++ N L+NG  K  K D     + EM    ++ +VVTY  LID     G +  AL
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY------- 192
            L D+M D+G+ P ++ Y  +I  L   +++ +A ++    ++ G+ P++YTY       
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450

Query: 193 -------------NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
                        N ++ G+CK    + AL    +M   +  PN VT+ + +  L    E
Sbjct: 451 CKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNC 264
              A   F  M   G+      Y C
Sbjct: 511 NDKAEKLFREMITRGLLNRSASYPC 535


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 275/536 (51%), Gaps = 31/536 (5%)

Query: 34  VCYSVFNALNSLEIPKF-------NPS---VFSTLIIAFSEMGHIEEA---------LWV 74
           V +SVF       IP F       NP+   +F + I  +S++ H ++            +
Sbjct: 9   VLFSVF-------IPNFSHFQQSPNPNFIGLFPSSISLYSQLHHHQDEENNLISSFNSLL 61

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           + K    P IQ  N +L+ L+K     +    +++M L G+V+D  T+ +LI+C    G 
Sbjct: 62  HHKNPTPPIIQF-NKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              + ++F +++ KG +P  + +  LI GLC +  + +A +    +   G   +  +Y  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++G CKV  +  AL+    +    +QPN V + +++D +CK   +  A + +  M    
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+ F  N LI G C  G L EA+ L  +M    I+P ++T++IL+   C  G+++ A+
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +L    K+ I+ +VVTYNSL+DGYC   ++ KA  +   M  +GV  NV +++++I+G 
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   +D A+ L+ EM  + ++P+VV + +LIDGL K G +   L+L  EM +    P++
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNI 420

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +S++  L KN  +  A+      T+  D G   P+   Y  +I+ LC  G++  A K
Sbjct: 421 ITYNSILDALCKNHHVDKAIALL---TNLKDQG-IRPDMYTYTVLIKGLCQSGKLEDAQK 476

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +F D+       D  TYT M++G          + LL+ M   G +P+A   ++++
Sbjct: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVI 532



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 224/451 (49%), Gaps = 39/451 (8%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K   P ++ +  ++  L        A S+ + M   G+V + +T+N L++ + ++   + 
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG------------- 254
           +   + ++L     PN +TF  L+ GLC  G +  A NF   +   G             
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 255 ----------------------VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
                                 V PN  +YN +ID  CKA  + +A  L S+M    ISP
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D FT N LI G C +GQL+ A GLL KM  E I   + T++ L+D +CKEG +++A  + 
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
               +K +  +VVT++SL+DG C    I+ A  ++  M  + ++ +V  +T +I+GL K 
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + E + L++EM   KI P+V T +SLI GL K G+IS  L    E  D+       PN
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ----PPN 419

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y +I+ ALC +  + KA  L ++++   +RPD  TYT +++GL ++ ++ D   +  
Sbjct: 420 IITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFE 479

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           D++  G   D     VM++G+   G   +A 
Sbjct: 480 DLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 213/430 (49%), Gaps = 38/430 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI  FS++G    +  V+ KI      P     N L+ GL  KG       F++++V
Sbjct: 108 FNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVV 167

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D V+YG LI+  C  G +  AL L   +  K ++P  V+Y ++I  +C    + 
Sbjct: 168 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 227

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP--------- 222
           +A  ++  M    + P+ +T N+L+ G+C +  +  A+   H+M+  N+ P         
Sbjct: 228 DAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILV 287

Query: 223 --------------------------NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
                                     +VVT+  LMDG C V E+  A + F  MA  GV 
Sbjct: 288 DAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVI 347

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            N+  Y  +I+G CK   + EA++L  EM   +I P+V TYN LI GL  +G++     L
Sbjct: 348 ANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKL 407

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + +M+  G   N++TYNS++D  CK   ++KA+++ + + ++G+ P++ T++ LI G C+
Sbjct: 408 VDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQ 467

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G ++ A  ++ ++++K    DV  +T +I G    G     L L  +M +    P+  T
Sbjct: 468 SGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKT 527

Query: 437 VSSLIHGLFK 446
              +I  LF+
Sbjct: 528 YEIVILSLFE 537



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 7/377 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    ++G I  AL + ++++   V P     N +++ + K    +  ++ Y +MV
Sbjct: 178 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 237

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  D  T   LI   C  G + +A+ L  +MI + I P +  ++IL+   C E K+ 
Sbjct: 238 AKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVK 297

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ M     +  ++ ++ TYN+LMDGYC V ++N+A + +  M    +  NV ++  ++
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK+  +  A N F  M    + PN+  YN LIDG  K G +   + L  EM      
Sbjct: 358 NGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQP 417

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ TYN ++  LC    ++ A  LL  +  +GI  ++ TY  LI G C+ G +E A  V
Sbjct: 418 PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKV 477

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL-S 410
              +  KG   +V T++ +I G C  G  DAA+ L ++M     +P+   +  +I  L  
Sbjct: 478 FEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFE 537

Query: 411 KDGN-MKETLRLYKEML 426
           KD N M E  +L +EM+
Sbjct: 538 KDENDMAE--KLLREMI 552



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 185/351 (52%), Gaps = 3/351 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I    +   + +A  +Y ++    + P    CN+L+ G    G+        
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLL 268

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+L  +   + T+ +L+D  C +G V +A  +    + K I   VV Y  L+ G C  
Sbjct: 269 HKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLV 328

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A+ +F SM   GV+ N+ +Y  +++G CK+  V+ A+  + EM    + PNVVT+
Sbjct: 329 KEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTY 388

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGL K+G++         M   G  PNI  YN ++D  CK  ++ +A++L + ++ 
Sbjct: 389 NSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKD 448

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PD++TY +LIKGLC  G+LE A+ + + +  +G   +V TY  +I G+C +G  + 
Sbjct: 449 QGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDA 508

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           AL++ S+M + G  PN  T+  +I    +    D A  L  EM+ + L+ +
Sbjct: 509 ALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDE 559



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 5/360 (1%)

Query: 206 NRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           N  +  ++ +LHH N  P ++ F  ++  L K      A +    M   G+  + F +N 
Sbjct: 51  NNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNI 110

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+   + G    + S+  ++ K    P+  T+N LIKGLC  G +  A     K+  +G
Sbjct: 111 LINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQG 170

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              + V+Y +LI+G CK G +  AL +  ++  K V+PN V ++ +ID  CKA  ++ A 
Sbjct: 171 FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAF 230

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            LY++MV K + PD     +LI G    G +KE + L  +M+   I P ++T S L+   
Sbjct: 231 DLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAF 290

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G++  A    L  T K D      + V Y +++   C   +I KA  +F  M S  +
Sbjct: 291 CKEGKVKEA-KMMLGVTMKKD---IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGV 346

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +  +YTTM+ GL + K + + + L  +M    I+P+ V    ++ G  + G +    +
Sbjct: 347 IANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLK 406



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 202/428 (47%), Gaps = 9/428 (2%)

Query: 149 GIEPTVV-IYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVN 206
           G+ P+ + +Y+ L H    EN ++   S F S+       P +  +N ++    K    +
Sbjct: 31  GLFPSSISLYSQLHHHQDEENNLI---SSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHS 87

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            AL  + +M  + +  +  TF +L++   ++G    + + F  + K G  PN   +N LI
Sbjct: 88  TALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLI 147

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C  G++ +A++   ++       D  +Y  LI GLC VG++  A  LL+++  + + 
Sbjct: 148 KGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 207

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N V YN +ID  CK   +  A  + SQM  K + P+  T +SLI G C  G +  A+GL
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGL 267

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M+++++ P +  F+ L+D   K+G +KE   +    ++  I   V T +SL+ G   
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
              I+ A + F    D         N   Y  +I  LC    + +A  LF +MR   + P
Sbjct: 328 VKEINKAKDIF----DSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIP 383

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +  TY +++ GL +  ++  V+ L+ +M   G  P+ +    ++    +N  +  A    
Sbjct: 384 NVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALL 443

Query: 567 EFLKESRI 574
             LK+  I
Sbjct: 444 TNLKDQGI 451


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 219/390 (56%), Gaps = 10/390 (2%)

Query: 32  HHVCYSVFNALNSLEI----PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPA 83
            H+C S      +LE+    P+ N   ++T+I  F   G ++ AL + R++     + P 
Sbjct: 491 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 549

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
                 +++G  K G+ D   + ++EM+  G V  + V Y  LI   C QG +  AL   
Sbjct: 550 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 609

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M+++G+  TV  Y +L+H L  + +  EA  +   M   G+ P+++TYN L++G+CK 
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 669

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V +ALE +  M    ++  VVT+  L+  L K G+++     F    + G+ P++ +Y
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 729

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+ H  +GN+  A  +  EMEK  I+PD  TYN L++GLC +G+++ A  L+ +M +
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 789

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  ++VTYN+LI GY  +GD++ AL + ++M  KG  P ++T+++LI G CK G  D 
Sbjct: 790 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 849

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +  EMV   + PD   + +LI+GL+ +
Sbjct: 850 AENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 243/483 (50%), Gaps = 12/483 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S+ + L+ A + +     +L +Y +++ L ++    A L+ L+        +  + +M  
Sbjct: 418 SLPNLLLTASAAVRPHATSLRLYSRMKSL-SLPISTASLHPLLSALPSAPAFALFADMFR 476

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             L     T+ +++   C  G   +AL L  +M      P  V Y  +I G C+  ++  
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQA 532

Query: 173 AESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVL 230
           A  + R MRE  G+ PN YTY  ++ G+CKV  V+ A++ + EML    ++P  V +  L
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C  G+L  A  +   M + GV   +  YN L+      G   EA  L  EM    +
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PDVFTYNILI G C  G ++ A  + + M + G+ A VVTY +LI    K+G +++   
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +   +G+ P++V +++LI+    +GNID A  +  EM  K + PD V +  L+ GL 
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + E  +L  EM E  I P + T ++LI G    G + +AL    E  +K   G+ +
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK---GF-N 828

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-LRAKRMLDVMM 529
           P  + Y A+IQ LC +GQ   A  +  +M  + + PD+ TY +++ GL    +R +D   
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDER 888

Query: 530 LLA 532
           L A
Sbjct: 889 LAA 891



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF +M    +      + I++  LC+  K   A  + R M      PN  TYN ++ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  AL+   EM     + PN  T+G ++ G CKVG +  A   F  M   G V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P   +YN LI G+C  G L  A+     M +  ++  V TYN+L+  L   G+   A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M  +G+  +V TYN LI+G+CKEG+++KAL +   M+ +GV   VVT+++LI    
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +     L+ E V + + PD+V++ ALI+  S  GN+     +  EM + +I P   
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL   GR+  A     E T++       P+ V Y  +I      G +  A ++
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERG----IQPDLVTYNTLISGYSMKGDVKDALRI 818

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            ++M +    P   TY  +++GL +  +  D   ++ +M++ GI PD
Sbjct: 819 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A ++F  M    +     T+N ++   C      RALE  
Sbjct: 447 SLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 506

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA +    M  + G+ PN + Y  +I G CK
Sbjct: 507 RQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 562

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+ +  EM  K E+ P+   YN LI G C  G+L+ A     +M + G+   V 
Sbjct: 563 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 622

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +G   +A  +  +M  KG+ P+V T++ LI+G CK GN+  A+ ++  M
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + +   VV +TALI  LSK G ++ET +L+ E +   I P +   ++LI+    +G I
Sbjct: 683 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 742

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A KL  +M    ++PD  T
Sbjct: 743 DRAFEIMGEMEKK----RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    +++G  +NG
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 845



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 180/359 (50%), Gaps = 10/359 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +  A+ +  EM E+  I+P+ +TY  +I G C VG+++ A  +  +M  +G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
               V YN+LI GYC +G ++ AL    +M E+GV   V T++ L+      G    A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L PDV  +  LI+G  K+GN+K+ L +++ M    +  +V T ++LI+ L 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G++      F E   +       P+ VLY A+I +    G I +A ++  +M    + 
Sbjct: 703 KKGQVQETDKLFDEAVRRG----IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD+ TY T++RGL    R+ +   L+ +M + GI PD V    ++ GY   GD+K A R
Sbjct: 759 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 161/308 (52%), Gaps = 10/308 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L ++M +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL +  +M E+G + PN  T+ ++I G CK G +D A+ ++ EM+ K  V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    G +   L     M+E  +  +V T + L+H LF +GR + A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY- 641

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++  G   +P+   Y  +I   C +G + KA ++F +M    +R    TYT ++
Sbjct: 642 ---ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 698

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
             L +  ++ +   L  + ++ GI PD V+   ++  +  +G++  AF     +++ RI 
Sbjct: 699 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758

Query: 576 SSETEGHT 583
             +   +T
Sbjct: 759 PDDVTYNT 766


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 256/519 (49%), Gaps = 13/519 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWE 105
           F  S+F  ++  + + G   +A+ +   +  +    P  ++ + +L  L+          
Sbjct: 145 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATN 204

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M+  G+   V T+G+++   C   +V  A +L  +M   G  P  ++Y  LIH L 
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +N++ EA  +   M   G +P++ T+N ++ G CKV  ++ A +    ML     P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE- 284
           T+G L+ GLC++G+L  A    + +      PN  + N LI+G+  +G L EA S  +E 
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M  F   PD+FTYNIL+ GLC  G L  A  L+ +M + G   NV+TY  L++G CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E+A  V  +M+ +G+  N V ++ LI   C+   +  A+ L +EM  K   PD+  + +
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI GL K   + E  RL+  ML      +  T ++LIH L + G    AL       D  
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV---NDML 557

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G C+ + + Y  +I+A C  G I K  +L+  M  D L  D  +   M+ GL +  ++
Sbjct: 558 FRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +    L D I  G VPD V    ++ G  + G +K A 
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 241/474 (50%), Gaps = 12/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+ TLI A S+   + EAL +  ++ V+   P +Q  N +++GL K  K     +  
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+L G   D +TYG L+   C  G     LN   +++ K   P   I   LI+G    
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIG----KLNEARKILIKIPCPNNAILNTLINGYVMS 367

Query: 168 NKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ EA+S    +M   G  P+++TYN LM G CK   ++ A +  +EM     +PNV+T
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L++GLCK G L  AG     M+  G+  N  +YNCLI   C+   +  A++L SEM 
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+FTYN LI GLC V +++ A  L   M  +G +AN VTYN+LI    + G  +
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KAL++ + M  +G   + +T++ LI   CK GNI+  + LY +M++  L  D +    +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL K G +       ++ +     P + T +S+++GL K GRI  ALN F    D+   
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF----DRLQV 663

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               P+   Y   I   C +G +  A   F     +   P N T+  ++  LL+
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 33/414 (7%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           ++IP  N ++ +TLI  +   G ++EA                 + LN            
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEA----------------QSFLN------------ 378

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              E M+  G   D+ TY +L+   C +G +  A +L +EM  +G EP V+ Y IL++GL
Sbjct: 379 ---ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + EA  +   M   G+  N   YN L+   C+   V+ AL    EM     +P++
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  L+ GLCKV  +  A   F +M   G   N   YN LI    + G   +A++L ++
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     + D  TYN LIK  C VG +E    L ++M  +G+ A+ ++ N +I+G CK G 
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A         +G  P++VT++S+++G CK G I  A+ L+  + ++ + PD   +  
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            I    K+G + +    +   +E    PS  T + L++ L K     N  NFF+
Sbjct: 676 FISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN--NFFV 727



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 221/481 (45%), Gaps = 10/481 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
             +N L   GKF  + +   +M   G+V     + +++      G   +A+ L  +M   
Sbjct: 117 VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV 176

Query: 149 GI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            + EPT   Y +++  L   N    A ++F  M   GV P ++T+  +M   C   +V+ 
Sbjct: 177 YLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDS 236

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     +M  H   PN + +  L+  L +  ++  A      M   G  P++  +N +I 
Sbjct: 237 ACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIH 296

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK   + +A  L   M      PD  TY  L+ GLC +G+L  A  +L K+       
Sbjct: 297 GLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CP 352

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQ-MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           N    N+LI+GY   G +++A S  ++ M   G +P++ T++ L+ G CK G++  A  L
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  +   P+V+ +  L++GL K G ++E   +  EM    +T +    + LI  L +
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCR 472

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             ++  ALN   E   K     C P+   Y ++I  LC   +I +A +LF +M  D    
Sbjct: 473 KEKVHVALNLLSEMCTKG----CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +N TY T++  LLR       + L+ DM+  G   D +    +++ + + G+++      
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 567 E 567
           E
Sbjct: 589 E 589


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 266/516 (51%), Gaps = 11/516 (2%)

Query: 44  SLEIPKFNP----SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIK 96
           SL IP F+     S  S        + ++++A+  + ++  +   P I   N +L+   K
Sbjct: 12  SLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAK 71

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
              + +       + L G+  D++T  +LI+C C  G +    ++  +++ +G +P  + 
Sbjct: 72  IKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTIT 131

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +T LI GLC + ++ +A      +   G+  +  +Y  L++G CK+ D   A++   ++ 
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               +PNV  +  ++D LCK   +  A   F  M   G+  ++  Y  LI G C A  L 
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ L +EM    I+P+V+TYNIL+  LC  G+++ A+ +L  M K  +  +V+TY++L+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY    +++KA  V + M+  GV P+V +++ LI+G CK   +D A+ L+ EM  K++V
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +++LIDGL K G +     L  EM +  I  +V T +SLI GL KNG +  A+  
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F +  D+       P    +  ++  LC  G++  A + F D+ +     D   Y  M+ 
Sbjct: 432 FNKMKDQG----IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMIN 487

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           G  +   + + + +L+ M + G VP+AV   +++  
Sbjct: 488 GHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/463 (32%), Positives = 245/463 (52%), Gaps = 5/463 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V +F   M+       ++ +  ++D          A++L   +  KGI+P ++   IL
Sbjct: 42  DAVSQF-NRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  ++    S+   + + G  P+  T+  L+ G C    VN+AL F+ ++L   +
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           + + V++G L++G+CK+G+ R A      +      PN+ +YN +ID  CK   + EA  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L SEM    IS DV TY  LI G C   +L+ A GLL +M  + I  NV TYN L+D  C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A +V + M +  V+P+V+T+S+L+DG      +  A  ++  M +  + PDV 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T LI+G  K+  + E L L+KEM +  + P + T SSLI GL K+GRIS   +   E 
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D+        N + Y ++I  LC +G + +A  LF+ M+   +RP + T+T +L GL +
Sbjct: 401 RDRG----IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             R+ D      D++  G   D     VM+ G+ + G L+ A 
Sbjct: 457 GGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 242/468 (51%), Gaps = 21/468 (4%)

Query: 43  NSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK 97
           + LE+    P + +   LI  F  MG I     V  KI      P       L+ GL  K
Sbjct: 83  HRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLK 142

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+ +    F+++++  G+  D V+YG LI+  C  GD   A+ L  ++  +  +P V +Y
Sbjct: 143 GQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMY 202

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
             +I  LC    + EA  +F  M   G+  ++ TY  L+ G+C  + +  A+   +EM+ 
Sbjct: 203 NTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC------K 271
             + PNV T+ +L+D LCK G+++ A N    M K  V P++  Y+ L+DG+       K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A ++F AMSL        ++PDV +Y ILI G C    ++ A  L ++M+++ ++  +VT
Sbjct: 323 AQHVFNAMSLMG------VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+SLIDG CK G +     +  +M ++G+  NV+T++SLIDG CK G++D A+ L+ +M 
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + + P    FT L+DGL K G +K+    ++++L       V+  + +I+G  K G + 
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            AL        K +   C PN V +  II AL    +  KA KL   M
Sbjct: 497 EALTML----SKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 197/386 (51%), Gaps = 38/386 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           KF+   + TLI    ++G    A+ + RKI+     P ++  N +++ L K       + 
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM   G+ ADVVTY  LI   C    + +A+ L +EM+ K I P V  Y IL+  LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 166 NENKMVEA-----------------------------------ESMFRSMRECGVVPNLY 190
            E K+ EA                                   + +F +M   GV P+++
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           +Y  L++G+CK   V+ AL  + EM   N+ P +VT+  L+DGLCK G +    +    M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G+  N+  YN LIDG CK G+L  A++L ++M+   I P  FT+ IL+ GLC  G+L
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+   Q +  +G   +V  YN +I+G+CK+G +E+AL++ S+M E G  PN VTF  +
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDII 520

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV 396
           I+   K    D A  L  +M+ + L+
Sbjct: 521 INALFKKDENDKAEKLLRQMICRGLL 546


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 252/527 (47%), Gaps = 53/527 (10%)

Query: 65  MGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           MG  ++A  + +   +   +P     + ++  L +  K +  +  ++EM   G++ DV T
Sbjct: 433 MGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYT 492

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y +LID  C  G + +A + FDEM   G  P+VV YT L+H      ++ +A  +F  M 
Sbjct: 493 YTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMV 552

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML----------------HHNLQPNVV 225
           + G  PN  TY+AL+DG CK  +  +A E Y +M+                  ++ PNVV
Sbjct: 553 DAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVV 612

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G L+DGLCK  ++  A      M+  G  PN  +Y+ LIDG CK G L  A  +   M
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    P V TY  LI  +    +L+ A  +L +M +     NVVTY ++IDG C+ G+ 
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +KAL + S M ++G  PNVVT++SLIDG  K+G +D ++ L+T+M+ +   P+ V +  L
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN------------------ 447
           I+     G + E   L  EM +      V    S++ G  K                   
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVS 852

Query: 448 ---------------GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
                          GR+  AL    E  + +     +     Y ++IQALC   Q+ KA
Sbjct: 853 IAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT-YTSLIQALCLASQLEKA 911

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
            +L+S++    + P+   +  +++GL++  +  + + L   M   G+
Sbjct: 912 FELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 244/473 (51%), Gaps = 22/473 (4%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           YEEM+    V + V       C CG G   KA  +   M+ KG  P    Y+ +I  LC 
Sbjct: 408 YEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCE 467

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A  +F+ M+  GV+P++YTY  L+D +CKV  + +A  ++ EM      P+VVT
Sbjct: 468 AMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVT 527

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM- 285
           +  L+    K  ++  A + F  M   G  PN   Y+ L+DG CKAG   +A  + ++M 
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587

Query: 286 ---------------EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
                              I+P+V TY  LI GLC   ++  A+ LL  M   G   N +
Sbjct: 588 GTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI 647

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y++LIDG+CK G ++ A  V  +M++ G  P V T++SLID   K   +D A+ + ++M
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +  S  P+VV +TA+IDGL + G  ++ L+L   M +    P+V T +SLI GL K+G++
Sbjct: 708 LESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             +L  F +    T G  C+PN+V Y  +I   C  G + +A  L S+M+          
Sbjct: 768 DMSLQLFTQMI--TQG--CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           Y ++++G   +K+ +  + LL ++   G+V  A +  +++  + + G L+ A 
Sbjct: 824 YCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKAL 874



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 237/559 (42%), Gaps = 64/559 (11%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           KF    F+    A  + G   +AL +  + +       C  +++GL++   FD    F  
Sbjct: 242 KFTVGCFAQ---ALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLH 298

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M     + +VVTY  L+     +  +     +   M+++G  P   ++  L+H  CN  
Sbjct: 299 RMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNAR 358

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR------ALEFYHEMLHHNLQP 222
               A  +   M  CG  P    YN  +   C   ++        A + Y EML  +   
Sbjct: 359 DYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVL 418

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N V        LC +G+   A      M + G  P+   Y+ +I   C+A  + +A  L 
Sbjct: 419 NKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 478

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM+   + PDV+TY ILI   C VG +E A     +M   G   +VVTY +L+  Y K 
Sbjct: 479 QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKT 538

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV----------- 391
             + +A  +  +M + G  PN +T+S+L+DG CKAG    A  +Y +M+           
Sbjct: 539 KQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFY 598

Query: 392 -----IKSLVPDVVVFTALIDGLSKD---------------------------------- 412
                  S+ P+VV + ALIDGL K                                   
Sbjct: 599 FEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658

Query: 413 -GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +     ++  M +    P+V T +SLI  +FK+ R+  A+    +  + +    C+P
Sbjct: 659 VGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS----CTP 714

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y A+I  LC  G+  KA KL S M      P+  TYT+++ GL ++ ++   + L 
Sbjct: 715 NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLF 774

Query: 532 ADMIKMGIVPDAVINQVMV 550
             MI  G  P+ V  +V++
Sbjct: 775 TQMITQGCAPNYVTYRVLI 793



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 217/519 (41%), Gaps = 61/519 (11%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           V++  CC  G   KAL     + D G  P+   Y  L+  L    +M     + + M E 
Sbjct: 177 VIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL 236

Query: 184 GVVPNLYTYNALMDGYCK--------------------------------VADVNRALEF 211
           G   + +T        CK                                 +  + A+ F
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISF 296

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            H M  ++  PNVVT+  L+ G  K  +L         M   G  PN  ++N L+  +C 
Sbjct: 297 LHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCN 356

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE--GLLQKMYKEGILA-- 327
           A +   A  L + M      P    YNI I  +C   +L   +   L +K+Y+E + +  
Sbjct: 357 ARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416

Query: 328 --NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V   +     C  G  +KA  +   M  KG  P+  T+S +I   C+A  ++ A  
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    ++PDV  +T LID   K G +++    + EM     +PSV T ++L+H   
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM------ 499
           K  ++  A + F    D      C+PN + Y+A++  LC  G+  KA ++++ M      
Sbjct: 537 KTKQVPQASDIFHRMVDAG----CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDN 592

Query: 500 ----------RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
                      +D++ P+  TY  ++ GL +A +++D   LL  M   G  P+ +I   +
Sbjct: 593 VGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDAL 652

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           + G+ + G L +A     F + S+ G   T  HT  S +
Sbjct: 653 IDGFCKVGKLDNAQEV--FFRMSKCGYLPTV-HTYTSLI 688



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 134/351 (38%), Gaps = 53/351 (15%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G   N+ V  C     C+ G   +A+     ++ F   P   TYN L++ L   GQ++ 
Sbjct: 171 LGRLLNVIVRKC-----CRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDM 225

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              + ++M + G   +  T        CKEG    AL +   +  +  + + V  + +I 
Sbjct: 226 GFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQMIS 282

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  +A   D A+     M   S +P+VV +  L+ G  K   +    R+   M+     P
Sbjct: 283 GLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNP 342

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY---------------- 476
           +    +SL+H  + N R      +  +  ++  G  C P +V+Y                
Sbjct: 343 NPSLFNSLVHS-YCNAR---DYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSP 398

Query: 477 -------------------------AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
                                    A   + LC  G+  KA ++   M      PD  TY
Sbjct: 399 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTY 458

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + ++  L  A ++    +L  +M  +G++PD     +++  + + G ++ A
Sbjct: 459 SKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 275/593 (46%), Gaps = 54/593 (9%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFN--PSVFSTLI 59
           F  +AN+  +++     + + E L +  +   V Y     L  +++   N    +F  +I
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQY----ILQQMKMDGINCCEDLFICII 116

Query: 60  IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             +  +G  E+AL ++ +I      P ++  N LL+ L+ + KF  +   Y  M   GL+
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI 176

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY +L+   C    V  A  LF EM +KG  P  V YT ++  LC   K+ +A  +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
               +     P++  YNAL+DG CK   +  A++   EM+ + + PNVV++  +++ LC 
Sbjct: 237 AGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 237 VGELRAAGNFFVH-----------------------------------MAKFGVFPNIFV 261
            G +  A   F                                     M + G  PN+  
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C  G+L EA+ +C +M++    P+V TY+ILI G    G L GA     +M 
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   NVVTY  ++D  CK    ++A S+  +MT +G  PN +TF++ I G C  G ++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L   M     +P++  +  L+D L +    +E   L++E+    + P++ T ++++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  + G +  AL  F +   +      +P+ + Y  +I A C  G++  A++L   + S
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGT----APDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587

Query: 502 -DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
                PD  TYT+++ G      + + M  L   I  GI P+      +VR +
Sbjct: 588 MKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 258/552 (46%), Gaps = 15/552 (2%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           DV + L   R    V    F+A+ +    +   S +  +I        ++   ++ ++++
Sbjct: 43  DVLKRLKTDRNLSSV-LGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101

Query: 80  VLPAIQACNAL----LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
            +  I  C  L    +NG  + G  +   + +  +   G    V  Y  L+D    +   
Sbjct: 102 -MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                L+  M   G+ P V  Y IL+  LC  +++  A  +F  M   G  P+  TY  +
Sbjct: 161 QMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   CK   ++ A E     L    +P+V  +  L+DG+CK G +  A      M   GV
Sbjct: 221 VSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+  Y+C+I+  C +GN+  A +L ++M       ++ T+  LIKG    G+L  A  
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L + M ++G   NVV YN+LI G C  G +E+AL VC QM   G  PNV T+S LIDG  
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+G++  A   +  M+     P+VV +T ++D L K+    +   L ++M     TP+  
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTM 455

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++ I GL  NGR+  A+       ++  G  C PN   Y  ++ AL    +  +A  L
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLL----ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F ++ + NL+P+  TY T+L G  RA  M + + L    +  G  PD++    M+  Y +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571

Query: 556 NGDLKSAFRCSE 567
            G +K A +  E
Sbjct: 572 QGKVKIAAQLVE 583


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 245/486 (50%), Gaps = 13/486 (2%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++EAL +       P    C AL+  L   G+     E    +  CG   DV+ Y  +
Sbjct: 79  GELDEALRLVGSAR-RPDAGTCAALIKKLSASGR---TAEARRVLAACG--PDVMAYNAM 132

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           +   CG G +  A  L  EM    +EP    Y  LI GLC   +   A ++   M     
Sbjct: 133 VAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 189

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           VP++ TY  L++  CK +   +A++   EM      P++VT+ V+++G+C+ G +  A  
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 249

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           F  ++  +G  PN   YN ++ G C A    +A  L  EM +    P+V T+N+LI  LC
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 309

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  +L+++ K G   N ++YN L+  +CK+  M+KA++    M  +G  P++V
Sbjct: 310 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 369

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           ++++L+   C++G +D A+ L  ++  K   P ++ +  +IDGL+K G  KE L L  EM
Sbjct: 370 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   + P + T S++  GL +  RI +A+  F +  D        PN VLY AII  LC 
Sbjct: 430 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG----IRPNTVLYNAIILGLCK 485

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
             +   A  LF+ M  +   P+  TYT ++ GL     + +   LL ++   G+V  ++I
Sbjct: 486 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545

Query: 546 NQVMVR 551
           N+  +R
Sbjct: 546 NKGAIR 551



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 209/406 (51%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ ++  +   G ++ A  +  ++ V P     N L+ GL  +G+  +     +EM+  
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 187

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
             V DVVTY +L++  C +    +A+ L DEM DKG  P +V Y ++++G+C E ++ +A
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 247

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
               +++   G  PN  +YN ++ G C       A E   EM      PNVVTF +L+  
Sbjct: 248 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 307

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G +  A      + K+G  PN   YN L+   CK   + +AM+    M      PD
Sbjct: 308 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 367

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + +YN L+  LC  G+++ A  LL ++  +G    +++YN++IDG  K G  ++AL + +
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 427

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+S++  G C+   I+ A+  + ++    + P+ V++ A+I GL K  
Sbjct: 428 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 487

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                + L+  M+     P+  T + LI GL   G I  A +   E
Sbjct: 488 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 218/472 (46%), Gaps = 16/472 (3%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L  L+++G+ D        +V      D  T   LI      G   +A  +         
Sbjct: 72  LRSLVRRGELDEALR----LVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 122

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P V+ Y  ++ G C   ++  A  +   M    V P+ YTYN L+ G C       AL 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EML     P+VVT+ +L++  CK    + A      M   G  P+I  YN +++G C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G + +A+     +  +   P+  +YNI++KGLC   + E AE L+ +M ++G   NVV
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N LI   C++G +E AL V  Q+ + G  PN ++++ L+   CK   +D AM     M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V +   PD+V +  L+  L + G +   + L  ++ +    P + + +++I GL K G+ 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             AL    E   K       P+ + Y+ I   LC + +I  A + F  ++   +RP+   
Sbjct: 420 KEALELLNEMVSKG----LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 475

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y  ++ GL + +     + L A MI  G +P+     +++ G    G +K A
Sbjct: 476 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 3/375 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G    AL V  ++     +P +     LL    K+  +    +  +EM
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+VTY V+++  C +G V  A+     +   G EP  V Y I++ GLC   + 
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 279

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M + G  PN+ T+N L+   C+   V  ALE   ++  +   PN +++  L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK  ++  A  F   M   G +P+I  YN L+   C++G +  A+ L  +++    
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P + +YN +I GL   G+ + A  LL +M  +G+  +++TY+++  G C+E  +E A+ 
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              ++ + G+ PN V ++++I G CK     +A+ L+  M+    +P+   +T LI+GL+
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 519

Query: 411 KDGNMKETLRLYKEM 425
            +G +KE   L  E+
Sbjct: 520 YEGLIKEARDLLDEL 534



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 7/343 (2%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+ +  ++ G C  G+L AA      M    V P+ + YN LI G C  G    A+++
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM +    PDV TY IL++  C     + A  LL +M  +G   ++VTYN +++G C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG ++ A+     +   G EPN V+++ ++ G C A   + A  L  EM  K   P+VV 
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F  LI  L + G ++  L + +++ +   TP+  + + L+H   K  ++  A+ F     
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL---- 356

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D      C P+ V Y  ++ ALC  G++  A +L   ++     P   +Y T++ GL +A
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +  + + LL +M+  G+ PD +    +  G      ++ A R
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 7/280 (2%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV  YN ++ G CG GQL+ A  L+ +M  E    +  TYN+LI G C  G    AL+V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAV 180

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  +   P+VVT++ L++  CK      AM L  EM  K   PD+V +  +++G+ +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G + + +   K +      P+  + + ++ GL    R  +A     E   K     C P
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG----CPP 296

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V +  +I  LC  G +  A ++   +      P++ +Y  +L    + K+M   M  L
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M+  G  PD V    ++     +G++  A      LK+
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 396


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 241/474 (50%), Gaps = 12/474 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+ TLI A S+   + EAL +  ++ V+   P +Q  N +++GL K  K     +  
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M+L G   D +TYG L+   C  G     LN   +++ K   P   I   LI+G    
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIG----KLNEARKILIKIPCPNNAILNTLINGYVMS 367

Query: 168 NKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++ EA+S    +M   G  P+++TYN LM G CK   ++ A +  +EM     +PNV+T
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L++GLCK G L  AG     M+  G+  N  +YNCLI   C+   +  A++L SEM 
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+FTYN LI GLC V +++ A  L   M  +G +AN VTYN+LI    + G  +
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KAL++ + M  +G   + +T++ LI   CK GNI+  + LY +M++  L  D +    +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL K G +       ++ +     P + T +S+++GL K GRI  ALN F    D+   
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF----DRLQV 663

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               P+   Y   I   C +G +  A   F     +   P N T+  ++  LL+
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 256/519 (49%), Gaps = 13/519 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWE 105
           F  S+F  ++  + + G   +A+ +   +  +    P  ++ + +L  L+          
Sbjct: 145 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATN 204

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M+  G+   V T+G+++   C   +V  A +L  +M   G  P  ++Y  LIH L 
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +N++ EA  +   M   G +P++ T+N ++ G CKV  ++ A +    ML     P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE- 284
           T+G L+ GLC++G+L  A    + +      PN  + N LI+G+  +G L EA S  +E 
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M  F   PD+FTYNIL+ GLC  G L  A  L+ +M + G   NV+TY  L++G CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E+A  V  +M+ +G+  N V ++ LI   C+   +  A+ L +EM  K   PD+  + +
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI GL K   + E  RL+  ML      +  T ++LIH L + G    AL       D  
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV---NDML 557

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G C+ + + Y  +I+A C  G I K  +L+  M  D L  D  +   M+ GL +  ++
Sbjct: 558 FRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +    L D I  G VPD V    ++ G  + G +K A 
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 33/414 (7%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           ++IP  N ++ +TLI  +   G ++EA                 + LN            
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEA----------------QSFLN------------ 378

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              E M+  G   D+ TY +L+   C +G +  A +L +EM  +G EP V+ Y IL++GL
Sbjct: 379 ---ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    + EA  +   M   G+  N   YN L+   C+   V+ AL    EM     +P++
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  L+ GLCKV  +  A   F +M   G   N   YN LI    + G   +A++L ++
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     + D  TYN LIK  C VG +E    L ++M  +G+ A+ ++ N +I+G CK G 
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A         +G  P++VT++S+++G CK G I  A+ L+  + ++ + PD   +  
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            I    K+G + +    +   +E    PS  T + L++ L K     N  NFF+
Sbjct: 676 FISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN--NFFV 727



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 221/481 (45%), Gaps = 10/481 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
             +N L   GKF  + +   +M   G+V     + +++      G   +A+ L  +M   
Sbjct: 117 VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV 176

Query: 149 GI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            + EPT   Y +++  L   N    A ++F  M   GV P ++T+  +M   C   +V+ 
Sbjct: 177 YLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDS 236

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A     +M  H   PN + +  L+  L +  ++  A      M   G  P++  +N +I 
Sbjct: 237 ACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIH 296

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK   + +A  L   M      PD  TY  L+ GLC +G+L  A  +L K+       
Sbjct: 297 GLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CP 352

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQ-MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           N    N+LI+GY   G +++A S  ++ M   G +P++ T++ L+ G CK G++  A  L
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  +   P+V+ +  L++GL K G ++E   +  EM    +T +    + LI  L +
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCR 472

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             ++  ALN   E   K     C P+   Y ++I  LC   +I +A +LF +M  D    
Sbjct: 473 KEKVHVALNLLSEMCTKG----CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +N TY T++  LLR       + L+ DM+  G   D +    +++ + + G+++      
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 567 E 567
           E
Sbjct: 589 E 589


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 232/436 (53%), Gaps = 18/436 (4%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + LL+ + K  K+D V   +E+M + G+  ++ T  +L++C C    +  AL+
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +MI  G EP++V +  L++G C  +++ +A  MF  M   G  PN+  YN ++DG C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V+ AL+  + M    + P+VVT+  L+ GLC  G    A      M K  ++P++F
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LID   K G + EA     EM +  + PD+ TY++LI GLC   +L+ AE +   M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VVTY+ LI+GYCK   +E  + +  +M+++GV  N VT++ LI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  ++  MV   + P+++ +  L+ GL  +G +++ L +  +M +  +   + T + +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQILKAS 493
           I G+ K G +++A +            YCS       P+   Y  ++  L   G   +A 
Sbjct: 438 IRGMCKAGEVADAWDI-----------YCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486

Query: 494 KLFSDMRSDNLRPDNC 509
            LF  M+ D + P+ C
Sbjct: 487 ALFRKMKEDGILPNEC 502



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 8/443 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +L+LF  M+     P++  ++ L+  +    K      ++  M+  G+  NL T N L++
Sbjct: 65  SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL F  +M+    +P++VTFG L++G C+   +  A   F  M   G  P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +IDG CK+  +  A+ L + MEK  I PDV TYN LI GLC  G+   A  ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K  I  +V T+N+LID   KEG + +A     +M  + ++P++VT+S LI G C  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A  ++  MV K   PDVV ++ LI+G  K   ++  ++L+ EM +  +  +  T 
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
           + LI G  + G+++ A   F          +C   PN + Y  ++  LC +G+I KA  +
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMV------FCGVHPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            +DM+ + +  D  TY  ++RG+ +A  + D   +   +   G++PD      M+ G  +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478

Query: 556 NGDLKSAFRCSEFLKESRIGSSE 578
            G  + A      +KE  I  +E
Sbjct: 479 KGLRREADALFRKMKEDGILPNE 501



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 4/372 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  ++    +   ++ +L+ +  M+     P++  F  L+  + K+ +       +  M 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+  N+   N L++  C+   L  A+S   +M K    P + T+  L+ G C   ++ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +  +M   G   NVV YN++IDG CK   ++ AL + ++M + G+ P+VVT++SLI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G C +G    A  + + M  + + PDV  F ALID   K+G + E    Y+EM+   + 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P + T S LI+GL    R+  A   F     K     C P+ V Y+ +I   C   ++  
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEH 344

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             KLF +M    +  +  TYT +++G  RA ++     +   M+  G+ P+ +   V++ 
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404

Query: 552 GYQENGDLKSAF 563
           G  +NG ++ A 
Sbjct: 405 GLCDNGKIEKAL 416



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 9/323 (2%)

Query: 11  YKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHI 68
           YK    +   + + L KS++  +      + LN +E     P V  +++LI      G  
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNA----LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 69  EEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
            +A  +     K E+ P +   NAL++  +K+G+     EFYEEM+   L  D+VTY +L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C    + +A  +F  M+ KG  P VV Y+ILI+G C   K+     +F  M + GV
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           V N  TY  L+ GYC+   +N A E +  M+   + PN++T+ VL+ GLC  G++  A  
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K G+  +I  YN +I G CKAG + +A  +   +    + PD++TY  ++ GL 
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477

Query: 306 GVGQLEGAEGLLQKMYKEGILAN 328
             G    A+ L +KM ++GIL N
Sbjct: 478 KKGLRREADALFRKMKEDGILPN 500


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 264/512 (51%), Gaps = 11/512 (2%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           P F+ ++F+  +L++A    GH+ +AL  ++     P + + N LL G   +  F+ V  
Sbjct: 90  PGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNA 149

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              EM   G+ ++  T+GV++   C + D+ KA++ F+ +     EPT+  YT+L+ GLC
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K+  A  +F  M   G  P++  Y++L+DG  K   V+ A +    M+     P  V
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++ GLCK G ++ A      M +  + P +  Y+ ++ G+   G + +A ++  EM
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM 329

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              + +PD  +Y + I+ L  +G+ E AE + + M ++G   ++ TY  +ID +CKEG M
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  V   M +  V+PN   ++ ++DG  K+  ++ A+ LY  ++   ++P  V +  +
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 449

Query: 406 IDGLSKDGNMKETLRLYKEMLEAK--ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           I+ L K   M E L L +EM   K  + PS+ T S +IHGL K G    A +   E  D 
Sbjct: 450 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 509

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+   Y ++IQ L   G++ +A +L  +M    + PD+ TY T+++ L R+  
Sbjct: 510 G----VIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD- 564

Query: 524 MLDVMM-LLADMIKMGIVPDAVINQVMVRGYQ 554
            +D    LL +M++ G  P+    + + +G++
Sbjct: 565 -VDAAWDLLQEMMRNGHTPNEFTFKAVEKGFR 595



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 215/441 (48%), Gaps = 12/441 (2%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G +  AL  F   I    EP V  + IL+ G    +      ++ R M+  G+  N  T+
Sbjct: 110 GHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATH 166

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++   C   D+++A+ +++ +  +  +P + T+ VL+DGLCK  ++  A + F  M +
Sbjct: 167 GVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIR 226

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P+I  Y+ LIDG  KAG + EA  L   M      P    Y  ++ GLC  G+++ 
Sbjct: 227 KGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQE 286

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A   +Q+M +  +   V TY+ ++ GY   G +EKA +V  +M ++   P+ ++++  I+
Sbjct: 287 AVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIE 346

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
                G  + A  ++  MV K   PD+  +  +ID   K+G+M     + + M +A + P
Sbjct: 347 ALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKP 406

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           + +  + ++ G  K+ R+  AL  +  +    DG    P+ V Y  +I ALC   ++ +A
Sbjct: 407 NRYIYTMIMDGFVKSSRLEEALELY--QRILKDG--ILPSTVTYNTVINALCKLKKMDEA 462

Query: 493 SKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +L  +M  R + L P   TY+ ++ GL +         LLA+MI  G++PD      ++
Sbjct: 463 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 522

Query: 551 RGYQENGDLKSAFRCSEFLKE 571
           +     G +    R  E L+E
Sbjct: 523 QTLAGAGKVS---RAMELLEE 540



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 181/401 (45%), Gaps = 52/401 (12%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF--FVHMA--KFGVF 256
           K +DV   LE  H  +   L  +  TFG ++      G LR   N   F H A  + G  
Sbjct: 42  KASDVQALLERSHAAVSTKLSRD--TFGGVL------GRLRCTCNALGFYHWAATRPGFS 93

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS---PDVFTYNILIKGLCGVGQLEGA 313
             +F  N L+    + G+L +A+        F+ S   P+V ++NIL++G       E  
Sbjct: 94  HTLFTRNSLLLALVRGGHLSDALGF------FQSSISEPNVSSFNILLRGFAARDDFEVV 147

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             LL++M   GI +N  T+  ++   C   D++KA+S  + ++    EP + T++ L+DG
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CKA  ++ A  ++ EM+ K   PD++ +++LIDGLSK G + E  +L   M+     P+
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTD-----------GGY-------------- 468
               +S++ GL K GRI  A+    E   +              GY              
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVME 327

Query: 469 ------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                 C+P+ + Y   I+AL   G+  +A K+F  M     +PD  TY  ++    +  
Sbjct: 328 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            M     +L  M K  + P+  I  +++ G+ ++  L+ A 
Sbjct: 388 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL 428



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 7/281 (2%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S  +FT N L+  L   G L  A G  Q    E    NV ++N L+ G+    D E   +
Sbjct: 93  SHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNA 149

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  +G+  N  T   ++   C   ++D A+  +  +      P +  +T L+DGL 
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K   ++    +++EM+     P +   SSLI GL K GR+  A        D        
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL----VDLMVARGPP 265

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P  V Y +I+  LC  G+I +A K   +MR   LRP   TY+ ++ G +   ++     +
Sbjct: 266 PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAV 325

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + +M      PD +   + +      G  + A +  E + E
Sbjct: 326 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 366



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           T  G    + T +SL+    + G++  A+G +   + +   P+V  F  L+ G +   + 
Sbjct: 88  TRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDF 144

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +    L +EM    IT +  T   ++  L     +  A+++F    +      C P    
Sbjct: 145 EVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYF----NSVSPNKCEPTLFT 200

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++  LC   ++ +A  +F +M     +PD   Y++++ GL +A R+ +   L+  M+
Sbjct: 201 YTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMV 260

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             G  P AV    +V G  + G ++ A +
Sbjct: 261 ARGPPPTAVAYTSIVAGLCKCGRIQEAVK 289


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 254/513 (49%), Gaps = 33/513 (6%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + N +++G  K+G+ D  +  + EM+  GL  DVVTY  LID  C    + KA+ +
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M DKG+ P    Y I+I G C+  ++ EA  + + M   G+ P++ TY+ L+  YCK
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +     A   +  M+    +PN   + +L+ G    G L    +    M + G+      
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LI  + K G + +AM+  +EM +  + PDV +Y+ +I  LC  G++E A     +M 
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            EG+  N++++ SLI G C  G+ +K   +  +M  +G+ P+ +  ++++D  CK G + 
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A   +  ++   + PDVV +  LIDG    G M E+++    M+   + P  +T +SL+
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPN-----HVLYAA------------------ 478
           +G FKNGR+ +AL  + E   K D  +C+       H L+ A                  
Sbjct: 558 NGYFKNGRVEDALALYREMFRK-DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616

Query: 479 ---------IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
                    ++  LC +  + +A ++F D+RS     D  T++ ++  LL+  R+ +   
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           L + M+  G VPD +   +M++ + E G L+ +
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES 709



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 237/497 (47%), Gaps = 43/497 (8%)

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +  MV  G+       G+LI C C  G +  A   F   +  G     V    LI GLC
Sbjct: 78  LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137

Query: 166 NENKMVEAESM-FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH---HNLQ 221
           + N+  +A  M FR M E G  P++++YNAL+ G C       ALE    M     +N  
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNVV++  ++DG  K GE+  A   F  M   G+ P++  YN LIDG CKA  + +A+++
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M    + PD  TYNI+I+G C +GQLE A  LL+KM   G+  +VVTY+ LI  YCK
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG---------------------------- 373
            G   +A SV   M  KG +PN   +  L+ G                            
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377

Query: 374 -------QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
                    K G +D AM  +TEM    L PDVV ++ +I  L K G +++ +  + +M+
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              ++P++ + +SLIHGL   G          E  ++       P+ +    I+  LC +
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG----IHPDAIFMNTIMDNLCKE 493

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++++A   F  +    ++PD  +Y T++ G     +M + +  L  M+ +G+ PD+   
Sbjct: 494 GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTY 553

Query: 547 QVMVRGYQENGDLKSAF 563
             ++ GY +NG ++ A 
Sbjct: 554 NSLLNGYFKNGRVEDAL 570



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 259/533 (48%), Gaps = 12/533 (2%)

Query: 35  CYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNA 89
            Y +F+ +    +P   P V  +++LI    +   +++A+ + + +    V+P  +  N 
Sbjct: 219 AYFLFHEMMGQGLP---PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ G    G+ +      ++M   GL  DVVTY +LI   C  G   +A ++FD M+ KG
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P   IY IL+HG   +  +++   +   M   G+      +N L+  Y K   V++A+
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
             + EM  + L+P+VV++  ++  LCK G +  A   F  M   G+ PNI  +  LI G 
Sbjct: 396 TAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G   +   L  EM    I PD    N ++  LC  G++  A+     +   G+  +V
Sbjct: 456 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDV 515

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V+YN+LIDGYC  G M++++    +M   G+ P+  T++SL++G  K G ++ A+ LY E
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K +    +    ++ GL + G +     LY +M++      + T ++++ GL +N  
Sbjct: 576 MFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSC 635

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  AL  F +   K        +   ++ +I AL   G+I +A  LFS M      PD  
Sbjct: 636 VDEALRMFEDLRSKE----FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVI 691

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY+ M++  +    + +   L   M K G   D+ +  ++VR   E GD++ A
Sbjct: 692 TYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 208/405 (51%), Gaps = 1/405 (0%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           +A N L+    K G  D     + EM   GL  DVV+Y  +I   C  G V  A+  F++
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ +G+ P ++ +T LIHGLC+  +  + E +   M   G+ P+    N +MD  CK   
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V  A +F+  ++H  ++P+VV++  L+DG C VG++  +      M   G+ P+ + YN 
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L++G+ K G + +A++L  EM + ++     T NI++ GL   G++  A  L  KM   G
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
               + TYN+++ G C+   +++AL +   +  K  E +V TFS +I+   K G ID A 
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L++ MV++  VPDV+ ++ +I    ++G ++E+  L+  M +         ++ ++  L
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRL 735

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            + G +  A   +L K D+ +    +    L   I+    Y  ++
Sbjct: 736 LEKGDVRRA-GTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEV 779



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 210/437 (48%), Gaps = 20/437 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKP---------------HHVCYSVFNALNSL 45
           I+++L +    K A   ++D+ + +++   P               H        A   +
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 401

Query: 46  EIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
                 P V  +ST+I    + G +E+A++ + ++    + P I +  +L++GL   G++
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 461

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
             V E   EM+  G+  D +    ++D  C +G V++A + FD +I  G++P VV Y  L
Sbjct: 462 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I G C   KM E+      M   G+ P+ +TYN+L++GY K   V  AL  Y EM   ++
Sbjct: 522 IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV 581

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           +   +T  +++ GL + G + AA   ++ M   G    I  YN ++ G C+   + EA+ 
Sbjct: 582 KFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 641

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           +  ++   E   DV T++I+I  L  VG+++ A+ L   M   G + +V+TY+ +I  + 
Sbjct: 642 MFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           +EG +E++ ++   M + G   +    + ++    + G++  A    T++  K+   +  
Sbjct: 702 EEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEAS 761

Query: 401 VFTALIDGLSKDGNMKE 417
               LI  +S+    KE
Sbjct: 762 TAALLIPIVSEKKYQKE 778



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 8/286 (2%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+SL + M +  ++       ILI+  C VG+L+ A        K G     VT N LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 338 GYCKEGDMEKALS-VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK--- 393
           G C     + A+  V  +M E G  P+V ++++LI G C       A+ L   M      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           +  P+VV +  +IDG  K+G + +   L+ EM+   + P V T +SLI GL K   +  A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           +       DK       P+   Y  +I+  C  GQ+ +A +L   M    L+PD  TY+ 
Sbjct: 255 VAILQHMFDKG----VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +++   +  R  +   +   M++ G  P++ I  +++ GY   G L
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 356



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 122/276 (44%), Gaps = 13/276 (4%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK-------ALSV 351
           IL +   G    E A  L  ++  +   A+V  +NS++    +             A+S+
Sbjct: 19  ILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSL 78

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M   GV         LI   C  G +D A   +   +        V    LI GL  
Sbjct: 79  FNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC- 137

Query: 412 DGNMKETLR--LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY- 468
           DGN  +     +++ M E   TP VF+ ++LI GL    +   AL   +  T   DGGY 
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMT--ADGGYN 195

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSPN V Y  +I     +G++ KA  LF +M    L PD  TY +++ GL +A+ M   +
Sbjct: 196 CSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAV 255

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +L  M   G++PD     +M+RGY   G L+ A R
Sbjct: 256 AILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 118/283 (41%), Gaps = 16/283 (5%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L   M + G+         LI  +C  G ++ A +  +   + G     VT + LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 373 GQCKAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA--- 428
           G C     D AM + +  M      PDV  + ALI GL  +   +E L L   M      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
             +P+V + +++I G FK G +  A   F E      G    P+ V Y ++I  LC    
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMM----GQGLPPDVVTYNSLIDGLCKAQA 250

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + KA  +   M    + PD  TY  M+RG     ++ + + LL  M   G+ PD V   +
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           +++ Y + G      RC+E    S   S   +G    S + H+
Sbjct: 311 LIQYYCKIG------RCAE--ARSVFDSMVRKGQKPNSTIYHI 345


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 248/490 (50%), Gaps = 6/490 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   + L+ G+  +GK     E +++M   G   D++ YG LI+         +A+ L
Sbjct: 7   PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M+ +        Y ++I  LC +   ++   MFR M   G+ PN+  Y++L++G C+
Sbjct: 67  HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  +  A+  + EM+   ++ NV+T+  L+   C+ G  + A   F  M   G+ P++  
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +  LID   K G + EA  +   M K   +P++ TYN L+ GLC   Q++ A  L + M 
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + GI  +V++YN+LI+GYC  G  E+A+++  +M  + + P++ T++ L+    + G I 
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+  M I    P +  +T L+DGL K+G ++E + +++ +   K  PS+   S LI
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G+F+  R  +A+  F    D+       PN V Y  +I  LC +G++L+A +LF  M  
Sbjct: 367 GGMFQARRWESAMEIF----DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
                D  ++  ++RG L+  ++   M  L  M +    P+  +  ++V  Y    D +S
Sbjct: 423 SGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYA--ADAQS 480

Query: 562 AFRCSEFLKE 571
           +   + FL E
Sbjct: 481 SELPNNFLHE 490



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 241/461 (52%), Gaps = 9/461 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   ++VT   L+   C +G VM AL LFD+M   G +  +++Y  LI+ L    +   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R M       N +TY  ++D  CK     + L+ + EM++  + PNV+ +  L++G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+VG+LR A N F  M   G+  N+  YN LI   C+ G   EA    S+M    I PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V T+  LI  L   G+++ A  + + M K+G   N+VTYNSL++G C    M+ A+ +  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M E+G++ +V+++++LI+G C +G  + AM L+ +M  + L P +  +T L+  L ++G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE-KTDKTDGGYCSPN 472
            ++    L+  M     +PS+ T + L+ GL KNG I  A++ F   K+ K       P+
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKY-----KPS 358

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
             +Y+ +I  +    +   A ++F ++ +  L P+  TY  M+ GL +  ++L+   L  
Sbjct: 359 IRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFV 418

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            M + G   D +    ++RG+ +   ++ A    EFLK  R
Sbjct: 419 QMEESGCEQDEISFNFIIRGFLQENQVQKAM---EFLKRMR 456



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 35/373 (9%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +   ++L+NGL + GK       ++EMV  G+ A+V+TY  LI   C  G   +A 
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM--- 196
             F +M+ +GI P VV +T LI  L  + K+ EA  +F  M + G  PN+ TYN+L+   
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229

Query: 197 --------------------------------DGYCKVADVNRALEFYHEMLHHNLQPNV 224
                                           +GYC       A+  + +M +  L P++
Sbjct: 230 CLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+ +L+  L + G +R A   F +M   G  P++  Y  L+DG CK G + EA+ +   
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS 349

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ++  +  P +  Y+ILI G+    + E A  +  ++   G++ N+VTYN +I+G CKEG 
Sbjct: 350 LKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGK 409

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A  +  QM E G E + ++F+ +I G  +   +  AM     M  K+  P+  V   
Sbjct: 410 LLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLM 469

Query: 405 LIDGLSKDGNMKE 417
           L++  + D    E
Sbjct: 470 LVNLYAADAQSSE 482



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 4/311 (1%)

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K G  PN+   + L+ G C  G + +A+ L  +M +     D+  Y  LI  L    Q  
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L ++M  E    N  TY  +ID  CK+G   K L +  +M   G+ PNV+ +SSLI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C+ G +  A+ L+ EMV + +  +V+ + +LI    + G  KE  R + +M+   I 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P V T ++LI  L K G++  A   F     + +    +PN V Y +++  LC   Q+  
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE----APNIVTYNSLLNGLCLHHQMDH 237

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +LF  M    ++ D  +Y T++ G   + +  + M L   M    + P      ++++
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 552 GYQENGDLKSA 562
              +NG +++A
Sbjct: 298 ALYQNGRIRTA 308



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 4/253 (1%)

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G   N+VT ++L+ G C EG +  AL +  +MT  G + +++ +  LI+   K     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+  M+ +    +   +  +ID L KDG   + L++++EM+   I P+V   SSLI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +GL + G++  A+N F E   +        N + Y ++I A C  G   +A++ FS M  
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQG----IKANVITYNSLIHASCRFGLWKEATRTFSQMVG 177

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           + + PD  T+TT++  L +  ++ +   +   MIK G  P+ V    ++ G   +  +  
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 562 AFRCSEFLKESRI 574
           A R  E + E  I
Sbjct: 238 AVRLFEVMVERGI 250


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 231/435 (53%), Gaps = 8/435 (1%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIEVL---PAI 84
           K +    S+   ++S  IP   P V++  I+  +F  +  ++ AL V  KI  L   P  
Sbjct: 70  KHYSTVLSLSKKMDSFGIP---PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDT 126

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL   GK     + +++MV  G   +VVTYG L++  C    + +ALNLF E
Sbjct: 127 ATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSE 186

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI KGI P +  Y  LIH LCN  +     ++   M +  ++PN+ + N ++D  CK   
Sbjct: 187 MIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V  A +    M+   ++P+VVT+  LMDG C   E+  A   F  M + G   N+  YN 
Sbjct: 247 VTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNT 306

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+G+CK   + +AM L  EM + E+ P+  TY+ LI GLC VG+L+ A  L  +M   G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N+VTY+ L+D  CK   + +A+++   +    ++P+V  ++  IDG C+AG+++AA 
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L++ +  + L PDV     +I GL K G + E  +L++EM E     +  T +++  GL
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGL 486

Query: 445 FKNGRISNALNFFLE 459
            +N + S A+    E
Sbjct: 487 LQNNKTSRAIQLLEE 501



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 241/476 (50%), Gaps = 4/476 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I     LL  + K   + +V    ++M   G+  DV T  ++I+  C    V  AL++
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P    +T L+ GLC   K+ EA  +F  M   G  PN+ TY  LM+G CK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  AL  + EM+   + P++ T+  L+  LC + E +        M K  + PN+  
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N ++D  CK G + EA  +   M +  + PDV TY  L+ G C   +++ A  +   M 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G + NVV+YN+LI+GYCK   ++KA+ +  +M  + + PN +T+S+LI G C  G + 
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ EMV    +P++V ++ L+D L K+  + E + L K +  + + P V   +  I
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G+ + G +  A + F     +       P+   +  +I+ LC  G + +ASKLF +M  
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRG----LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +    + CTY T+ +GLL+  +    + LL +M+  G   D     ++V+   ++G
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 227/429 (52%), Gaps = 4/429 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+L  +M   GI P V   TI+I+  C+ N++  A S+   + + G  P+  T+  L+ G
Sbjct: 76  LSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRG 135

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C V  +  AL+ + +M+    QPNVVT+G LM+GLCK  +L  A N F  M   G+ P+
Sbjct: 136 LCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPD 195

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           IF YN LI   C         +L +EM K +I P+V + NI++  LC  G++  A  ++ 
Sbjct: 196 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVD 255

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M + G+  +VVTY +L+DG+C   +M++A+ V   M   G   NVV++++LI+G CK  
Sbjct: 256 MMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQ 315

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ID AM L+ EM  + L+P+ + ++ LI GL   G +++ + L+ EM+     P++ T S
Sbjct: 316 RIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYS 375

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+  L KN R++ A+          +G    P+  +Y   I  +C  G +  A  LFS+
Sbjct: 376 ILLDYLCKNHRLAEAMALL----KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN 431

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           +    L+PD  T+  M+RGL +   + +   L  +M + G + +      + +G  +N  
Sbjct: 432 LAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNK 491

Query: 559 LKSAFRCSE 567
              A +  E
Sbjct: 492 TSRAIQLLE 500



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/429 (32%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F  M+     P +  +  L+  +          S+ + M   G+ P++YT   +++
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V+ AL    ++L    QP+  TF  L+ GLC VG++  A + F  M   G  P
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQP 159

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  L++G CK   L EA++L SEM    ISPD+FTYN LI  LC + + +    LL
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLL 219

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M K  I+ NVV+ N ++D  CKEG + +A  V   M + GVEP+VVT+++L+DG C  
Sbjct: 220 NEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLR 279

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A+ ++  MV    V +VV +  LI+G  K   + + + L++EM   ++ P+  T 
Sbjct: 280 SEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTY 339

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
           S+LIHGL   GR+ +A+  F E         C   PN V Y+ ++  LC + ++ +A  L
Sbjct: 340 STLIHGLCHVGRLQDAIALFNEMV------ACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              +   NL PD   Y   + G+ RA  +     L +++   G+ PD   + +M+RG  +
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453

Query: 556 NGDLKSAFR 564
            G L  A +
Sbjct: 454 RGLLDEASK 462



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 194/369 (52%), Gaps = 5/369 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P+V  + TL+    +   + EAL ++ ++    + P I   N+L++ L    ++  V 
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               EMV   ++ +VV+  +++D  C +G V +A ++ D MI  G+EP VV Y  L+ G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  ++M EA  +F  M   G V N+ +YN L++GYCK+  +++A+  + EM    L PN 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L+ GLC VG L+ A   F  M   G  PN+  Y+ L+D  CK   L EAM+L   
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +E   + PDV  YNI I G+C  G LE A  L   +   G+  +V T+N +I G CK G 
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A  +  +M E G   N  T++++  G  +      A+ L  EM+ +    DV     
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 405 LIDGLSKDG 413
           L+  LS DG
Sbjct: 517 LVKMLSDDG 525



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 178/359 (49%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++ AL  +H MLH +  P +  F  L+  + K+       +    M  FG+ P+++    
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+  C    +  A+S+ +++ K    PD  T+  L++GLC VG++  A  +  KM  EG
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVTY +L++G CK+  + +AL++ S+M  KG+ P++ T++SLI   C         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EMV   ++P+VV    ++D L K+G + E   +   M++  + P V T ++L+ G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
                +  A+  F    D      C  N V Y  +I   C   +I KA  LF +M    L
Sbjct: 277 CLRSEMDEAVKVF----DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            P+  TY+T++ GL    R+ D + L  +M+  G +P+ V   +++    +N  L  A 
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM 391



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 190/395 (48%), Gaps = 4/395 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  M      P ++ +  L+    K+   +  L    +M    + P+V T 
Sbjct: 35  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            ++++  C +  +  A +    + K G  P+   +  L+ G C  G + EA+ +  +M  
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+V TY  L+ GLC   QL  A  L  +M  +GI  ++ TYNSLI   C   + + 
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
             ++ ++M +  + PNVV+ + ++D  CK G +  A  +   M+   + PDVV + AL+D
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G      M E ++++  M+      +V + ++LI+G  K  RI  A+  F E   +    
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE--- 331

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN + Y+ +I  LC+ G++  A  LF++M +    P+  TY+ +L  L +  R+ + 
Sbjct: 332 -LIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEA 390

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           M LL  +    + PD  +  + + G    GDL++A
Sbjct: 391 MALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAA 425



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 114/230 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+NG  K  + D     +EEM    L+ + +TY  LI   C  G +  A+ LF+EM+ 
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P +V Y+IL+  LC  +++ EA ++ +++    + P++  YN  +DG C+  D+  
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A + +  +    LQP+V T  +++ GLCK G L  A   F  M + G   N   YN +  
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQ 484

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           G  +      A+ L  EM     S DV T  +L+K L   G  +  + +L
Sbjct: 485 GLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 267/527 (50%), Gaps = 9/527 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++L+ A  E    +EA   +   E +   P +Q  N L+    +K +FD   E    M 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   DV +YG LI+     G +  AL LFDEM ++G+ P V  Y ILI G   +  ++
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 172 EAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            A  ++ R ++   V PN+ +YN +++G CK    + + E +H M  +    ++ T+  L
Sbjct: 237 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G L  A   +  MA+ GV P++ VYN +++G+ +AG + E + L   MEK E 
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK-EG 355

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              V +YNILI+GL    +++ A  + + + ++   A+ +TY  L+ G CK G + KALS
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +      + +   +SS+I+G C+ G +D   G+  +M      P+  V  A+I+G  
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +++ LR +  M+     P+V T ++LI+GL K  R S A     E   K   G+  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK---GW-K 531

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y+ ++  LC   ++  A  L+        +PD   +  ++ GL  + ++ D + L
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            ++M +   VP+ V +  ++ G+ +  D + A +  + + +S   S+
Sbjct: 592 YSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 266/522 (50%), Gaps = 10/522 (1%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           T+I A+++    ++AL +++++  +    P I++ N+LLN LI+  K+D    F+     
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL  ++ TY +LI   C +    KA  L + M ++G  P V  Y  LI+ L     M +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLM 231
           A  +F  M E GV P++  YN L+DG+ K  D+  A E +  +L   ++ PN+ ++ V++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK G+   +   +  M K     +++ Y+ LI G C +GNL  A  +  EM +  +S
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV  YN ++ G    G++E    L + M KEG    VV+YN LI G  +   +++A+S+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISI 381

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              + EK    + +T+  L+ G CK G ++ A+ +  E        D   ++++I+GL +
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G + E   +  +M +    P+    +++I+G  +  ++ +AL FF     K     C P
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG----CFP 497

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
             V Y  +I  L    +  +A  L  +M     +P+  TY+ ++ GL + K++   + L 
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
              ++ G  PD  ++ +++ G   +G ++ A +    +K+ +
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 237/476 (49%), Gaps = 12/476 (2%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +    F+P VFS  TLI + ++ G++ +AL ++ ++    V P +   N L++G  K
Sbjct: 172 LNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231

Query: 97  KGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           KG   +  E +E ++    V  ++ +Y V+I+  C  G   ++  ++  M        + 
Sbjct: 232 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y+ LIHGLC    +  A  +++ M E GV P++  YN +++GY +   +   LE +  M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                +  VV++ +L+ GL +  ++  A + +  + +     +   Y  L+ G CK G L
Sbjct: 352 EKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A+S+  E E      D F Y+ +I GLC  G+L+   G+L +M K G   N    N++
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G+ +   +E AL     M  KG  P VVT+++LI+G  KA     A  L  EM+ K  
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+++ ++ L++GL +   +   L L+ + LE    P V   + +IHGL  +G++ +AL 
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            + E   +     C PN V +  +++         +ASK++ D    +    NC Y
Sbjct: 591 LYSEMKQRK----CVPNLVTHNTLMEGFYKVRDFERASKIW-DHILQSWSSSNCYY 641



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 200/429 (46%), Gaps = 38/429 (8%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           + ++ LI  F + G I  A  ++ ++     V P I + N ++NGL K GKFD  +E + 
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP---------------- 152
            M       D+ TY  LI   CG G++  A  ++ EM + G+ P                
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339

Query: 153 ------------------TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
                             TVV Y ILI GL    K+ EA S++  + E     +  TY  
Sbjct: 340 RIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G CK   +N+AL    E  +     +   +  +++GLC+ G L         M K G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN  V N +I+G  +A  L +A+     M      P V TYN LI GL    +   A 
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+++M  +G   N++TY+ L++G C+   ++ AL++  Q  EKG +P+V   + +I G 
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C +G ++ A+ LY+EM  +  VP++V    L++G  K  + +   +++  +L++  + + 
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNC 639

Query: 435 FTVSSLIHG 443
           + +     G
Sbjct: 640 YYMEHTCQG 648


>gi|449452174|ref|XP_004143835.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 362

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/237 (54%), Positives = 165/237 (69%), Gaps = 11/237 (4%)

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL +CSQMTE GVEPNV+TFS+LIDG CK  N+ AAMG+Y+EMVIKSL PDVV +TA+ID
Sbjct: 128 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 187

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD----- 462
           G  K G+MKE L+LY +ML+  ITP+ +T+S L+ GL K+G+IS+AL  F EK +     
Sbjct: 188 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 247

Query: 463 -KTDGGYCSP---NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              D G   P   NHV Y A+I  LC DGQ  KA KLFSDMR   L+PD   Y  MLRGL
Sbjct: 248 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 307

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            + K +L  MML ADM+K G++P++ ++ ++   YQE+G LKSA  CS+ L+E+  G
Sbjct: 308 FQVKYIL--MMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEENLHG 362



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 102/182 (56%), Gaps = 13/182 (7%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ +CS+M +  + P+V T++ LI G C +  L+ A G+  +M  + +  +VVTY ++ID
Sbjct: 128 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 187

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV------ 391
           G+CK G M++AL + S M + G+ PN  T S L+DG CK G I  A+ L+TE +      
Sbjct: 188 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 247

Query: 392 -------IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                   K  + + V +TALI GL +DG   + ++L+ +M    + P       ++ GL
Sbjct: 248 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 307

Query: 445 FK 446
           F+
Sbjct: 308 FQ 309



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 15/233 (6%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           ALE   +M  + ++PNV+TF  L+DG CK+  L+AA   +  M    + P++  Y  +ID
Sbjct: 128 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 187

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK----- 322
           GHCK G++ EA+ L S+M    I+P+ +T + L+ GLC  G++  A  L  +  +     
Sbjct: 188 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 247

Query: 323 --------EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
                   +  L N V Y +LI G C++G   KA+ + S M   G++P+ V +  ++ G 
Sbjct: 248 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 307

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            +   I   M L+ +M+   ++P+  V   L +   + G +K      K++ E
Sbjct: 308 FQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEE 358



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 16/237 (6%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL +  +M + G+EP V+ ++ LI G C    +  A  ++  M    + P++ TY A++D
Sbjct: 128 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 187

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF---- 253
           G+CK   +  AL+ Y +ML + + PN  T   L+DGLCK G++  A   F    +F    
Sbjct: 188 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 247

Query: 254 ------GVFP---NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                 G  P   N   Y  LI G C+ G   +A+ L S+M ++ + PD   Y ++++GL
Sbjct: 248 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 307

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             V  +     L   M K G++ N   +  L + Y + G ++ A + CS+  E+ + 
Sbjct: 308 FQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQN-CSKDLEENLH 361



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 23/227 (10%)

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   +M   G+  +V+T+  LID  C   ++  A+ ++ EM+ K + P VV YT +I G 
Sbjct: 130 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 189

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL---- 220
           C    M EA  ++  M + G+ PN YT + L+DG CK   ++ ALE + E +        
Sbjct: 190 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 249

Query: 221 ------QP---NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
                 +P   N V +  L+ GLC+ G+   A   F  M ++G+ P+  +Y  ++ G   
Sbjct: 250 VDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG--- 306

Query: 272 AGNLFEA----MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              LF+     M L ++M KF + P+   + IL +     G L+ A+
Sbjct: 307 ---LFQVKYILMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQ 350



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 15/221 (6%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +   + L++G  K     +    Y EMV+  L  DVVTY  +ID  C  G + +AL
Sbjct: 140 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 199

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-----CGV--------V 186
            L+ +M+D GI P     + L+ GLC + K+ +A  +F    E     C V        +
Sbjct: 200 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSL 259

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
            N   Y AL+ G C+    ++A++ + +M  + LQP+ V + V++ GL +V  +      
Sbjct: 260 TNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMM--L 317

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              M KFGV PN  V+  L + + ++G L  A +   ++E+
Sbjct: 318 HADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEE 358


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  ++ TYG+LI  CC  G +         +I KG     + +T L+ G
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M + G +PN+++YN L+ G C                      
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 201 ---------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                          K  D+++A   YHEML   + PNVVT+  ++  LCK   +  A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K GV PN   YN ++ G+C +G   EA+    +M    + PDV TYN L+  LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            FS LI    K G +D AM ++++M  + L PD V +  +I  L K G +++ +R +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++ +++P     +SLIH L    +   A    LE  D+   G C  + + + +II + C 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR---GIC-LDTIFFNSIIDSHCK 491

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+++++ KLF  M    ++PD  TY+T++ G   A +M +   LLA M+ +G+ PD V 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 546 NQVMVRGY 553
              ++ GY
Sbjct: 552 YNTLINGY 559



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 260/548 (47%), Gaps = 46/548 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS   L+    +    +EAL + + +     +  P + +   ++NG  K+G  D  +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y EM+  G++ +VVTY  +I   C    + KA+ +   M+  G+ P    Y  ++HG 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  EA    + M   GV P++ TYN+LMD  CK      A + +  M    L+P +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+G L+ G    G L         M + G+ PN +V++ LI  + K G + +AM + S+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--------------------- 323
           M +  ++PD  TY  +I  LC  G++E A    ++M  E                     
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 324 --------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                         GI  + + +NS+ID +CKEG + ++  +   M   GV+P+++T+S+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C AG +D A  L   MV   + PD V +  LI+G  K   M++ L L++EM  + 
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ++P + T + ++ GLF+  R + A   ++  T+       S     Y  I+  LC +   
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST----YNIILHGLCKNNLT 635

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 550 VRGYQENG 557
                E G
Sbjct: 696 AENLIEQG 703



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 252/522 (48%), Gaps = 21/522 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I A  +   +++A+ V     K  V+P  +  N++++G    G+      F 
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P +  Y  L+ G   +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VE   +   M   G+ PN Y ++ L+  Y K   V++A+  + +M    L P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G ++  LCK G +  A  +F  M    + P   VYN LI   C      +A  L  EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N +I   C  G++  +E L   M + G+  +++TY++LIDGYC  G M++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M   G++P+ VT+++LI+G CK   ++ A+ L+ EM    + PD++ +  ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------LEK 460
           GL +         LY  + E+     + T + ++HGL KN     AL  F       L+ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             +T           +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M   L+ 
Sbjct: 653 ETRT-----------FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              + ++  L   M + G   ++ +   +VR   + GD+  A
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 179/365 (49%), Gaps = 52/365 (14%)

Query: 243 AGNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFEAMSLCSEMEKF---EISPDVFT 296
           A + F  + + G   +I+  NC    +  H  A     A+S  + M +    E++P++ T
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA----AVSRYNRMARAGADEVTPNLCT 93

Query: 297 YNILIKGLCGVGQL------------------------------------EGAEGLLQKM 320
           Y ILI   C  G+L                                    +  + +L++M
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAG 378
            + G + NV +YN L+ G C E   ++AL +   M + G +  P+VV+++++I+G  K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A G Y EM+ + ++P+VV ++++I  L K   M + + +   M++  + P+  T +
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++HG   +G+   A+ F   K   +DG    P+ V Y +++  LC +G+  +A K+F  
Sbjct: 274 SIVHGYCSSGQPKEAIGFL--KKMHSDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+P+  TY T+L+G      ++++  LL  M++ GI P+  +  +++  Y + G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 559 LKSAF 563
           +  A 
Sbjct: 390 VDQAM 394



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 10/285 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V PN+ T+
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    P+VF+ + L+ GL    R   AL       D  DGG C P+ V Y  +I     +
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKE 212

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + KA   + +M    + P+  TY++++  L +A+ M   M +L  M+K G++P+    
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             +V GY  +G  K A     FLK+      E +  T  S + +L
Sbjct: 273 NSIVHGYCSSGQPKEAI---GFLKKMHSDGVEPDVVTYNSLMDYL 314



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 16/258 (6%)

Query: 319 KMYKEG---ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +M + G   +  N+ TY  LI   C  G ++   +    + +KG   + + F+ L+ G C
Sbjct: 78  RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 137

Query: 376 KAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITP 432
                  AM +    M     +P+V  +  L+ GL  +   +E L L + M +      P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V + +++I+G FK G +  A   + E  D+       PN V Y++II ALC    + KA
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG----ILPNVVTYSSIIAALCKAQAMDKA 253

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ + M  + + P+  TY +++ G   + +  + +  L  M   G+ PD V    ++  
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313

Query: 553 YQENGDLKSAFRCSEFLK 570
             +NG      RC+E  K
Sbjct: 314 LCKNG------RCTEARK 325


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 269/532 (50%), Gaps = 9/532 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI    + G  +EAL VY+++    + P+++  +AL+  L ++    ++ + 
Sbjct: 190 LNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDL 249

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EEM   GL  ++ TY + I      G +  A  +   M D+G  P VV YT+LI  LC 
Sbjct: 250 LEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A+ ++  MR     P+L TY  LM  +    D+     F+ EM      P+VVT
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVT 369

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L++ LCK G++  A +    M   G+ PN+  YN LI G      L EA+ L + ME
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++P  ++Y + I     +G  E A    +KM K GI+ ++   N+ +    + G + 
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + + +   G+ P+ VT++ ++    KAG ID A  L TEM+ +   PD++V  +LI
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L K G + E  +++  + + K+ P+V T + LI GL K G++  AL+ F   + K  G
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF--GSMKESG 607

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN V + A++  LC +  +  A K+F  M   N  PD  TY T++ GL++  R   
Sbjct: 608 --CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY 665

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKESRIGSS 577
                  M K  + PD V    ++ G  ++G ++ A +   EF+ +S + +S
Sbjct: 666 AFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTS 716



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 268/603 (44%), Gaps = 85/603 (14%)

Query: 38   VFNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            +FN + SL +    P+ +S ++    + ++G  E+AL  + K++   ++P+I ACNA L 
Sbjct: 424  LFNNMESLGVA---PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480

Query: 93   GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
             L + G+     + + ++  CGL  D VTY +++ C    G + KA  L  EM+ +G EP
Sbjct: 481  SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540

Query: 153  -----------------------------------TVVIYTILIHGLCNENKMVEAESMF 177
                                               TVV Y ILI GL  E K+++A  +F
Sbjct: 541  DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600

Query: 178  RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             SM+E G  PN  T+NAL+D  CK   V+ AL+ +  M   N  P+V+T+  ++ GL K 
Sbjct: 601  GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKE 660

Query: 238  GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE------------- 284
            G    A  F+  M KF + P+      L+ G  K G + +A+ +  E             
Sbjct: 661  GRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719

Query: 285  ----MEKFEISPDV-----FTYNI--------------LIKGLCGVGQLEGAEGLLQKMY 321
                ME   I  ++     F   +              LI+ LC   +   A+ L  K  
Sbjct: 720  WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFT 779

Query: 322  KE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  G      +YN L+DG       E AL +  +M   G  PN+ T++ L+D   K+  I
Sbjct: 780  KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            D    LY EM+ +   P+++    +I  L K  ++ + L LY E++    +P+  T   L
Sbjct: 840  DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            I GL K GR   A+  F E  D      C PN  +Y  +I      G +  A  LF  M 
Sbjct: 900  IGGLLKAGRSEEAMKIFEEMPDYQ----CKPNCAIYNILINGFGKAGNVNIACDLFKRMI 955

Query: 501  SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             + +RPD  +YT ++  L    R+ D +    ++   G+ PD V   +M+ G  ++  L+
Sbjct: 956  KEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLE 1015

Query: 561  SAF 563
             A 
Sbjct: 1016 EAL 1018



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 250/568 (44%), Gaps = 47/568 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI    + G ++EA  ++ +++ L   P +   N L+ GL K+GK     + +  M
Sbjct: 544  VVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM 603

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G   + VT+  L+DC C    V  AL +F  M      P V+ Y  +I+GL  E + 
Sbjct: 604  KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRA 663

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGV 229
              A   +  M++  + P+  T   L+ G  K   V  A++   E +H + LQ +   +G 
Sbjct: 664  GYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGE 722

Query: 230  LMDG-----------------------------------LCKVGELRAAGNFFVHMAK-F 253
            LM+                                    LCK  +   A   F    K  
Sbjct: 723  LMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSL 782

Query: 254  GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            G  P    YNCL+DG         A+ L  EM+     P++FTYN+L+       +++  
Sbjct: 783  GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDEL 842

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
              L  +M   G   N++T+N +I    K   + KAL +  ++      P   T+  LI G
Sbjct: 843  FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              KAG  + AM ++ EM      P+  ++  LI+G  K GN+     L+K M++  I P 
Sbjct: 903  LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + + + L+  LF  GR+ +A+++F E   K  G    P+ V Y  +I  L    ++ +A 
Sbjct: 963  LKSYTILVECLFMTGRVDDAVHYFEEL--KLTG--LDPDTVSYNLMINGLGKSRRLEEAL 1018

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             LFS+M++  + P+  TY  ++     A  +     +  ++  MG+ P+      ++RG+
Sbjct: 1019 SLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGH 1078

Query: 554  QENGDLKSAFRCSEFLKESRIGSSETEG 581
             ++G+   AF  S F K   +G S   G
Sbjct: 1079 SKSGNKDRAF--SVFKKMMIVGCSPNAG 1104



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 206/428 (48%), Gaps = 9/428 (2%)

Query: 57   TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIK----KGKFDSVWEFYEEMVL 112
            TL+    + G +E+A+ +  +      +Q  N +   L++    + + +    F E +V 
Sbjct: 686  TLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVC 745

Query: 113  CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMV 171
              +  D      LI   C Q   + A  LFD+     G  PT   Y  L+ GL   N   
Sbjct: 746  NSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITE 805

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
             A  +F  M+  G  PN++TYN L+D + K   ++   E Y+EML    +PN++T  +++
Sbjct: 806  AALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIII 865

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
              L K   +  A + +  +      P    Y  LI G  KAG   EAM +  EM  ++  
Sbjct: 866  SALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCK 925

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            P+   YNILI G    G +  A  L ++M KEGI  ++ +Y  L++     G ++ A+  
Sbjct: 926  PNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHY 985

Query: 352  CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              ++   G++P+ V+++ +I+G  K+  ++ A+ L++EM  + + P++  + ALI     
Sbjct: 986  FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGN 1045

Query: 412  DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             G + +  ++++E+    + P+VFT ++LI G  K+G    A + F  K     G  CSP
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVF--KKMMIVG--CSP 1101

Query: 472  NHVLYAAI 479
            N   +A +
Sbjct: 1102 NAGTFAQL 1109


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 249/463 (53%), Gaps = 14/463 (3%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           I +F    FST     S M ++EE + ++ K+     LP+I   + +L+ + K   +D V
Sbjct: 33  ISRFWGRTFST---KRSSM-NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLV 88

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              +  M +CG+  D+ +Y ++I+C C     + AL++  +M+  G EP VV  + LI+G
Sbjct: 89  ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C  N++ +A  +   M E G  P++  YN ++DG CK+  VN A+E +  M    ++ +
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VT+  L+ GLC  G    A      M    + PN+  +  +ID   K G   EAM L  
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +  + PDVFTYN LI GLC  G+++ A+ +L  M  +G L +VVTYN+LI+G+CK  
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +++   +  +M ++G+  + +T++++I G  +AG  DAA  +++ M  +   P++  ++
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYS 385

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+ GL  +  +++ L L++ M +++I   + T + +IHG+ K G + +A + F   + K
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
                  P+ V Y  +I   C   Q  K+  L+  M+ D L P
Sbjct: 446 G----LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           ++LF +MI     P++V ++ ++  +          S+F  M  CG+  +LY+YN +++ 
Sbjct: 54  IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C+ +    AL    +M+    +P+VVT   L++G C+   +  A +    M + G  P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +YN +IDG CK G + +A+ L   ME+  +  D  TYN L+ GLC  G+   A  L++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M    I+ NV+T+ ++ID + KEG   +A+ +  +MT + V+P+V T++SLI+G C  G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  +   MV K  +PDVV +  LI+G  K   + E  +L++EM +  +     T +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           ++I G F+ GR   A   F     +       PN   Y+ ++  LC + ++ KA  LF +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR-------PNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           M+   +  D  TY  ++ G+ +   + D   L   +   G+ PD V    M+ G+
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 197/392 (50%), Gaps = 7/392 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E   +F  M +   +P++  ++ ++    K  + +  +  +H M    +  ++ ++ +++
Sbjct: 52  EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           + LC+      A +    M KFG  P++   + LI+G C+   +F+A+ L S+ME+    
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV  YN +I G C +G +  A  L  +M ++G+ A+ VTYNSL+ G C  G    A  +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  + + PNV+TF+++ID   K G    AM LY EM  + + PDV  + +LI+GL  
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E  ++   M+     P V T ++LI+G  K+ R+      F E   +   G    
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG---- 347

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + Y  IIQ     G+   A ++FS M S   RP+  TY+ +L GL    R+   ++L 
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLF 404

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +M K  I  D     +++ G  + G+++ A+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++E+ + +  +M +    P++V FS ++    K+ N D  + L+  M +  +  D+  + 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +I+ L +       L +  +M++    P V TVSSLI+G  +  R+ +A++     +  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV---SKM 165

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            + G+  P+ V+Y  II   C  G +  A +LF  M  D +R D  TY +++ GL  + R
Sbjct: 166 EEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             D   L+ DM+   IVP+ +    ++  + + G    A +  E
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 4/253 (1%)

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE    L  KM +   L ++V ++ ++    K  + +  +S+   M   G+  ++ +++ 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I+  C+      A+ +  +M+     PDVV  ++LI+G  +   + + + L  +M E  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P V   +++I G  K G +++A+  F    D+ +      + V Y +++  LC  G+ 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELF----DRMERDGVRADAVTYNSLVAGLCCSGRW 225

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A++L  DM   ++ P+  T+T ++   ++  +  + M L  +M +  + PD      +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285

Query: 550 VRGYQENGDLKSA 562
           + G   +G +  A
Sbjct: 286 INGLCMHGRVDEA 298


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 276/556 (49%), Gaps = 51/556 (9%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSV 103
           P+F+ S    ++ AFS     + AL  +R++       P +++ NALL+  ++  +F   
Sbjct: 80  PRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDA 139

Query: 104 WEFYEEMVLCG----LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
             F+  +        +  ++ TY +++   C +GD+ +A+ LFD +  +G+ P  + Y+ 
Sbjct: 140 DAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYST 199

Query: 160 LIHGLCNENKMVEAESMFRSM------------------------------------REC 183
           L+ G    N++  A  +   M                                    R+ 
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  PNL TYN ++DG CK+     A + +  M+ +N QP+++T+G ++ GLC+  ++ +A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              +  M K G+ P++ +YN L+ G C AG + EA      M    I  +V +YNI++KG
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKG 378

Query: 304 LCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           L   G ++ A  L + + K+  L+ ++VT++++I G C++G   K+L +  +    G E 
Sbjct: 379 LFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL 438

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +  ++SS+I G CK G +D A+ LY ++ + S  P+  ++ ALI+G  +     + +R+Y
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M E   +P+  T ++LIHGL K  +   A  F  E  +K     C  +   Y ++I+ 
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG----CMLDVNTYGSLIRG 554

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI-KMGIVP 541
           LC D +I  A  L++ +    L+ D   +  ++ GL  A ++ +   LL++M  K    P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614

Query: 542 DAVINQVMVRGYQENG 557
           + V    ++ G+ E G
Sbjct: 615 NVVTYNTLMDGFYETG 630



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 261/512 (50%), Gaps = 9/512 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STL+  F +   ++ AL++  ++   EV P     NALL G  + G+F+     +E++
Sbjct: 196 TYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQL 255

Query: 111 VL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           V   G   ++ TY V++D  C  G   +A ++++ M+    +P ++ Y  +IHGLC    
Sbjct: 256 VRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTD 315

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  ++  M + G+VP++  YN+L+ G+C    V  A +F+  M    ++ NV ++ +
Sbjct: 316 VDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNI 374

Query: 230 LMDGLCKVGELRAAGNFFVHMAKF-GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++ GL   G +  A + +  + K   + P++  ++ +I G C+ G   +++ +  E    
Sbjct: 375 MLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTS 434

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
               D F+Y+ +I GLC  G+L+ A  L +K+  +    N   YN+LI+G+C+      A
Sbjct: 435 GKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + V SQM E    P  +T+++LI G CKA     A     EM+ K  + DV  + +LI G
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L +D  +   L L+ ++L+  +   V   + LIHGL   G++  A     E  +K +   
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNN--- 611

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C PN V Y  ++      G   KA+ L+  +  + L PD  +Y T ++GL    R  + +
Sbjct: 612 CCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGV 671

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            LL +M+  GI+P A+   ++VR   + G ++
Sbjct: 672 QLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 201/396 (50%), Gaps = 13/396 (3%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH----HNLQPNVVTFGVLMDGLCKVGE 239
           G  P + ++NAL+D + +    + A  F+  + H      + PN+ T+ +++  LC  G+
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F  +   G+ P+   Y+ L+ G  K   L  A+ L  EM  +E+ PD   YN 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           L+ G    G+ E A  + +++ ++ G   N+ TYN ++DG CK G  ++A  V  +M   
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
             +P+++T+ ++I G C++ ++D+A  +Y+EM+   LVPDVV++ +L+ G    G + E 
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLY 476
            + +  M  + I  +V + + ++ GLF  G +  A + +  LEK D       SP+ V +
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDS-----LSPDMVTF 408

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           + +I  LC  G   K+ ++  + R+     D  +Y++M+ GL +  R+ D + L   +  
Sbjct: 409 STMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
               P++ I   ++ G+ +      A R    + E+
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN 504



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 177/358 (49%), Gaps = 17/358 (4%)

Query: 242 AAGNFFVHMAKF-GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK----FEISPDVFT 296
           AA   F  +  F G  P +  +N L+D   +A    +A +  + +        I+P++ T
Sbjct: 102 AALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQT 161

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YNI+++ LC  G L+ A  L   +   G+  + +TY++L+ G+ K   ++ AL +  +M 
Sbjct: 162 YNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP 221

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNM 415
              V+P+ V +++L+ G  + G  + AM ++ ++V      P++  +  ++DGL K G  
Sbjct: 222 SYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMF 281

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           KE   +++ M+     P + T  ++IHGL ++  + +A   + E   KT      P+ V+
Sbjct: 282 KEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI-KTG---LVPDVVI 337

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y ++++  C+ G++ +A K +  M    +R +  +Y  ML+GL     M+D    L +++
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGG-MVDKATDLWELL 395

Query: 536 KM--GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           +    + PD V    M+ G  E G    A +  + L+E+R    E +  +  S +  L
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKG---FANKSLQILEEARTSGKELDEFSYSSMISGL 450


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 248/477 (51%), Gaps = 10/477 (2%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  + ++G +E+AL ++ ++I     P     N  +NGL +        +  + MV 
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G   DV TY ++++C C  G + +A  + ++M+D+G  P +  +  LI  LC  N++ E
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   GV P++YT+N L++  CKV D + AL  + EM +    P+ VT+  L+D
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC +G+L  A +    M   G   +   YN +IDG CK   + EA  +  +M+   IS 
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  T+N LI GLC   +++ A  L+ +M  EG+  N +TYNS++  YCK+GD++KA  + 
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G E +VVT+ +LI+G CKAG    A+ +   M IK + P    +  ++  L + 
Sbjct: 463 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 522

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
            N+++ L L++EM E    P   T   +  GL +  G I  A +F LE  DK      S 
Sbjct: 523 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 582

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             +L   ++  L  D   ++A ++   M   +LR  +    + +RG L+ ++  D +
Sbjct: 583 FRMLAEGLLN-LGMDDYFIRAIEII--MEKVDLRESD---VSAIRGYLKIRKFYDAL 633



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 244/530 (46%), Gaps = 44/530 (8%)

Query: 74  VYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           +  +++ L  IQA     N LLN L++  K   +   Y EM   G+  DVVT+  L+   
Sbjct: 40  ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 99

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    V  A+ + +EM  +G+ P    +T L+ G   E  +  A  +   M E G     
Sbjct: 100 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 159

Query: 190 YTYNALMDGYCKVADVNRALEFYHE----------------------------------- 214
            T N L++GYCK+  V  AL +  +                                   
Sbjct: 160 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 219

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+     P+V T+ ++++ LCK G+L  A      M   G  P+I  +N LI   C    
Sbjct: 220 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 279

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+ L  ++    +SPDV+T+NILI  LC VG    A  L ++M   G   + VTYN+
Sbjct: 280 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LID  C  G + KAL +   M   G   + +T++++IDG CK   I+ A  ++ +M ++ 
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  + + F  LIDGL KD  + +   L  +M+   + P+  T +S++    K G I  A 
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 459

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +        T  G+   + V Y  +I  LC  G+   A K+   MR   +RP    Y  +
Sbjct: 460 DIL---ETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 515

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENGDLKSAF 563
           L+ L R   + D + L  +M ++G  PDA+  +++ RG  +  G +K AF
Sbjct: 516 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 565



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 269/572 (47%), Gaps = 16/572 (2%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---V 80
           N+L       +  SV++ + +  I K +   F+TL+ A      +  A+ +  ++    V
Sbjct: 62  NVLVEGSKMKLLESVYSEMGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 120

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P       L+ G +++G  ++       M+  G  A  VT  VLI+  C  G V  AL 
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 180

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              + I  G EP  + Y   ++GLC  + +  A  +   M + G  P+++TYN +++  C
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A    ++M+     P++ TF  L+  LC    L  A +    +   GV P+++
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LI+  CK G+   A+ L  EM+    +PD  TYN LI  LC +G+L  A  LL+ M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   + +TYN++IDG CK+  +E+A  V  QM  +G+  N +TF++LIDG CK   I
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  L  +M+ + L P+ + + +++    K G++K+   + + M        V T  +L
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I+GL K GR   AL     +  +  G   +P    Y  ++Q+L     I  A  LF +M 
Sbjct: 481 INGLCKAGRTQVALKVL--RGMRIKGMRPTPKA--YNPVLQSLFRRNNIRDALSLFREMA 536

Query: 501 SDNLRPDNCTYTTMLRGLLRA----KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
                PD  TY  + RGL R     K   D M+   +M+  G +P+    +++  G    
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML---EMVDKGFIPEFSSFRMLAEGLLNL 593

Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           G      R  E + E ++   E++    R +L
Sbjct: 594 GMDDYFIRAIEIIME-KVDLRESDVSAIRGYL 624



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 226/454 (49%), Gaps = 6/454 (1%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           L G+ AD V Y  L++    +G  MK L +++ EM  +GI+P VV +  L+  LC  +++
Sbjct: 47  LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  M   M   GV P+  T+  LM G+ +   +  AL     ML        VT  VL
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +  A  +       G  P+   YN  ++G C+  ++  A+ +   M +   
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDVFTYNI++  LC  GQLE A+G+L +M   G L ++ T+N+LI   C    +E+AL 
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  Q+T KGV P+V TF+ LI+  CK G+   A+ L+ EM      PD V +  LID L 
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + + L L K+M       S  T +++I GL K  RI  A   F    D+ D    S
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF----DQMDLQGIS 401

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N + +  +I  LC D +I  A +L + M S+ L+P+N TY ++L    +   +     +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M   G   D V    ++ G  + G  + A +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 248/491 (50%), Gaps = 21/491 (4%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKK 97
           +  +++ LE P   P   + LI      G   EA  V    E  P + A NA++ G    
Sbjct: 81  LVESMSGLE-PSAAPGPCAALIKKLCASGRTAEARRVLAACE--PDVMAYNAMVAGYCVT 137

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+ D+      +M    +  D  TY  LI   CG+G    AL + D+M+ +G  P VV Y
Sbjct: 138 GQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTY 194

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           TIL+   C  +   +A  +   MR  G  P++ TYN +++G C+   V+ A+EF   +  
Sbjct: 195 TILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPS 254

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
           H  +PN V++ +++ GLC       A      M++ G  PN+  +N LI   C+ G +  
Sbjct: 255 HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEP 314

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           AM +  ++ K+  +P+  +YN ++   C   +++ A   ++ M   G   ++V+YN+L+ 
Sbjct: 315 AMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLT 374

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             C+ G+++ A+ +  Q+ +KG  P +++++++IDG  KAG    A+ L  EMV K L P
Sbjct: 375 ALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQP 434

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D++ ++ +  GL ++  ++E +R + ++ +  I P+    ++++ GL K     NA++ F
Sbjct: 435 DIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLF 494

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           +          C PN   Y  +I+ L Y+G + +A +L  ++         C+   + +G
Sbjct: 495 IYMISNG----CMPNESTYTILIEGLTYEGLVKEARELLGEL---------CSRGVVSKG 541

Query: 518 LLR--AKRMLD 526
           L+   A R+LD
Sbjct: 542 LINKAAIRLLD 552



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 241/491 (49%), Gaps = 19/491 (3%)

Query: 66  GHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +EEAL +      +E   A   C AL+  L   G+           VL     DV+ Y
Sbjct: 73  GDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR-----VLAACEPDVMAY 127

Query: 123 GVLID--CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
             ++   C  GQ D  + L     + D  +EP    Y  LI GLC   +   A  +   M
Sbjct: 128 NAMVAGYCVTGQLDAARRL-----VADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDM 182

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G VP++ TY  L++  CK +   +A++   EM      P+++T+ V+++G+C+ G +
Sbjct: 183 LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRV 242

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A  F   +   G  PN   YN ++ G C A    +A  L +EM +    P+V T+N+L
Sbjct: 243 DDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNML 302

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC  G +E A  +L ++ K G   N ++YN ++  +CK+  M++A++    M  +G 
Sbjct: 303 ISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGC 362

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P++V++++L+   C+ G +DAA+ L  ++  K   P ++ +  +IDGL+K G  KE L 
Sbjct: 363 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  EM+   + P + T S++  GL +  RI  A+  F +  D        PN VLY AI+
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG----IRPNTVLYNAIL 478

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC   +   A  LF  M S+   P+  TYT ++ GL     + +   LL ++   G+V
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538

Query: 541 PDAVINQVMVR 551
              +IN+  +R
Sbjct: 539 SKGLINKAAIR 549



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 222/483 (45%), Gaps = 12/483 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            +P     N  L GL+++G  +      E M      A       LI   C  G   +A 
Sbjct: 55  AVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +         EP V+ Y  ++ G C   ++  A  +   M    + P+ YTYN L+ G 
Sbjct: 115 RVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGL 166

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C       AL    +ML     P+VVT+ +L++  CK    + A      M   G  P+I
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDI 226

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN +++G C+ G + +A+     +      P+  +YNI++KGLC   + E AE L+ +
Sbjct: 227 ITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 286

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M ++G   NVVT+N LI   C+ G +E A+ V  Q+ + G  PN ++++ ++   CK   
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D AM     MV +   PD+V +  L+  L + G +   + L  ++ +   TP + + ++
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL K G+   AL    E   K       P+ + Y+ I   LC + +I +A + F  +
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKG----LQPDIITYSTISSGLCREDRIEEAIRAFCKV 462

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +   +RP+   Y  +L GL + +   + + L   MI  G +P+     +++ G    G +
Sbjct: 463 QDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLV 522

Query: 560 KSA 562
           K A
Sbjct: 523 KEA 525



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 193/435 (44%), Gaps = 51/435 (11%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVI--YTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           +GD+ +AL L + M   G+EP+        LI  LC   +  EA    R +  C      
Sbjct: 72  RGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEAR---RVLAAC------ 120

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
                                          +P+V+ +  ++ G C  G+L AA      
Sbjct: 121 -------------------------------EPDVMAYNAMVAGYCVTGQLDAARRLVAD 149

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M    + P+ + YN LI G C  G    A+ +  +M +    PDV TY IL++  C    
Sbjct: 150 MP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSG 206

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  LL +M  +G   +++TYN +++G C+EG ++ A+     +   G EPN V+++ 
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           ++ G C A   + A  L  EM  K   P+VV F  LI  L + G ++  + +  ++ +  
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            TP+  + + ++H   K  ++  A+ F      +     C P+ V Y  ++ ALC  G++
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG----CYPDIVSYNTLLTALCRGGEV 382

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L   ++     P   +Y T++ GL +A +  + + LL +M+  G+ PD +    +
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442

Query: 550 VRGYQENGDLKSAFR 564
             G      ++ A R
Sbjct: 443 SSGLCREDRIEEAIR 457



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 206 NRALEFYHEML--HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           N  L F H  +    N  P+       + GL + G+L  A      M+  G+ P+     
Sbjct: 39  NSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGP 96

Query: 264 C--LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           C  LI   C +G   EA  + +  E     PDV  YN ++ G C  GQL+ A  L+  M 
Sbjct: 97  CAALIKKLCASGRTAEARRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMP 151

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            E    +  TYN+LI G C  G    AL V   M  +G  P+VVT++ L++  CK     
Sbjct: 152 ME---PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYK 208

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L  EM  K   PD++ +  +++G+ ++G + + +   K +      P+  + + ++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL    R  +A     E + K   GY  PN V +  +I  LC  G +  A ++   +  
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQK---GY-PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK 324

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               P++ +Y  +L    + K+M   M  +  M+  G  PD V    ++      G++ +
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDA 384

Query: 562 AFRCSEFLKE 571
           A      LK+
Sbjct: 385 AVELLHQLKD 394


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 248/477 (51%), Gaps = 10/477 (2%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  + ++G +E+AL ++ ++I     P     N  +NGL +        +  + MV 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G   DV TY ++++C C  G + +A  + ++M+D+G  P +  +  LI  LC  N++ E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   GV P++YT+N L++  CKV D + AL  + EM +    P+ VT+  L+D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC +G+L  A +    M   G   +   YN +IDG CK   + EA  +  +M+   IS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  T+N LI GLC   +++ A  L+ +M  EG+  N +TYNS++  YCK+GD++KA  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G E +VVT+ +LI+G CKAG    A+ +   M IK + P    +  ++  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
            N+++ L L++EM E    P   T   +  GL +  G I  A +F LE  DK      S 
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             +L   ++  L  D   ++A ++   M   +LR  +    + +RG L+ ++  D +
Sbjct: 675 FRMLAEGLLN-LGMDDYFIRAIEII--MEKVDLRESD---VSAIRGYLKIRKFYDAL 725



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 244/530 (46%), Gaps = 44/530 (8%)

Query: 74  VYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           +  +++ L  IQA     N LLN L++  K   +   Y EM   G+  DVVT+  L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    V  A+ + +EM  +G+ P    +T L+ G   E  +  A  +   M E G     
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 190 YTYNALMDGYCKVADVNRALEFYHE----------------------------------- 214
            T N L++GYCK+  V  AL +  +                                   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+     P+V T+ ++++ LCK G+L  A      M   G  P+I  +N LI   C    
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+ L  ++    +SPDV+T+NILI  LC VG    A  L ++M   G   + VTYN+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LID  C  G + KAL +   M   G   + +T++++IDG CK   I+ A  ++ +M ++ 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  + + F  LIDGL KD  + +   L  +M+   + P+  T +S++    K G I  A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +        T  G+   + V Y  +I  LC  G+   A K+   MR   +RP    Y  +
Sbjct: 552 DIL---ETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENGDLKSAF 563
           L+ L R   + D + L  +M ++G  PDA+  +++ RG  +  G +K AF
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 657



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 265/559 (47%), Gaps = 16/559 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           SV++ + +  I K +   F+TL+ A      +  A+ +  ++    V P       L+ G
Sbjct: 167 SVYSEMGARGI-KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            +++G  ++       M+  G  A  VT  VLI+  C  G V  AL    + I  G EP 
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            + Y   ++GLC  + +  A  +   M + G  P+++TYN +++  CK   +  A    +
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M+     P++ TF  L+  LC    L  A +    +   GV P+++ +N LI+  CK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +   A+ L  EM+    +PD  TYN LI  LC +G+L  A  LL+ M   G   + +TYN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++IDG CK+  +E+A  V  QM  +G+  N +TF++LIDG CK   ID A  L  +M+ +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L P+ + + +++    K G++K+   + + M        V T  +LI+GL K GR   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           L     +  +  G   +P    Y  ++Q+L     I  A  LF +M      PD  TY  
Sbjct: 586 LKVL--RGMRIKGMRPTPKA--YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641

Query: 514 MLRGLLRA----KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           + RGL R     K   D M+   +M+  G +P+    +++  G    G      R  E +
Sbjct: 642 VFRGLCRGGGPIKEAFDFML---EMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698

Query: 570 KESRIGSSETEGHTTRSFL 588
            E ++   E++    R +L
Sbjct: 699 ME-KVDLRESDVSAIRGYL 716



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 226/454 (49%), Gaps = 6/454 (1%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           L G+ AD V Y  L++    +G  MK L +++ EM  +GI+P VV +  L+  LC  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  M   M   GV P+  T+  LM G+ +   +  AL     ML        VT  VL
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +  A  +       G  P+   YN  ++G C+  ++  A+ +   M +   
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDVFTYNI++  LC  GQLE A+G+L +M   G L ++ T+N+LI   C    +E+AL 
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  Q+T KGV P+V TF+ LI+  CK G+   A+ L+ EM      PD V +  LID L 
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + + L L K+M       S  T +++I GL K  RI  A   F    D+ D    S
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF----DQMDLQGIS 493

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N + +  +I  LC D +I  A +L + M S+ L+P+N TY ++L    +   +     +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M   G   D V    ++ G  + G  + A +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 72/362 (19%)

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE----------------- 323
           L + + + + +P    Y  +I+ L  VG L+  + L+ +M +E                 
Sbjct: 61  LNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYE 120

Query: 324 --------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
                               GI A+ V YN L++   +   M+   SV S+M  +G++P+
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF++L+   C+A  +  A+ +  EM  + + PD   FT L+ G  ++G+++  LR+  
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCS 470
            MLE   + +  TV+ LI+G  K GR+ +AL +  ++    DG             G C 
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI--ADGFEPDQITYNTFVNGLCQ 298

Query: 471 PNHV--------------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +HV                     Y  ++  LC +GQ+ +A  + + M      PD  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + T++  L    R+ + + L   +   G+ PD     +++    + GD   A R  E +K
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 571 ES 572
            S
Sbjct: 419 NS 420


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 239/466 (51%), Gaps = 8/466 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V  +  LID     G+  +A  ++ +++ KG +     Y +LI       ++  A  MFR
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M+  G  P+ YTY  L++   K   V  A  F+  ML   L PN+ T+ +LMD   KVG
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +L  A   F  M + G  P++  YN L+D  C AG +  A  L  +M     SPD +TY+
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GL   G++E A  + ++M   G+  ++V YNSL+    K G+M++   +  +M+ K
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  P+  +F++++D   KA   DAA  ++  MV     PD++ +  LID  ++ G+  + 
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            ++ +EM+EA   P   T +SLIH L  +G++  A     E   +T G  C P+ V Y  
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM--ETAG--CRPDVVTYNR 420

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  L   G+  +A++LF  M+   + PD  +Y   + GL    R+ + ++L  DM  +G
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480

Query: 539 IVPDAVINQVMVRGYQENGD--LKSAFRC-SEFLK-ESRIGSSETE 580
              D  + ++++R     GD  L++  +  S+F+  ESR+ S + +
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESRLTSQKAK 526



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 234/475 (49%), Gaps = 7/475 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEF 106
             P+    LI A+       +A  ++ + E     P + A   L++ L+  G+F+     
Sbjct: 28  LRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELV 87

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y+++V  G   D   Y VLI      G +  A+ +F EM  KG EP    Y  L++ L  
Sbjct: 88  YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGK 147

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA S F +M E G+ PN+ TYN LMD + KV  ++ AL  + EM     QP+VVT
Sbjct: 148 AGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVT 207

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L+D LC  G + AA   F  M   G  P+ + Y+ L++G  K+G + EA  +  EM 
Sbjct: 208 YNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMV 267

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++ D+  YN L+  L   G ++    L+++M ++G   +  ++N+++D   K    +
Sbjct: 268 DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPD 327

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  V ++M E G +P++++++ LID   + G+   A  +  EMV    +P+   + +LI
Sbjct: 328 AAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLI 387

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             L+ DG + E   + +EM  A   P V T + L+  L K G    A   F +  DK   
Sbjct: 388 HWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG-- 445

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
               P+ + YA  I  L +D ++ +A  LF DM++     D   Y  ++R   RA
Sbjct: 446 --VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRA 498



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 183/374 (48%), Gaps = 3/374 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  L+ A  + G ++EA   +  +    + P I   N L++   K G+ D     + EM
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G    VVTY +L+D  C  G V  A  LF +M   G  P    Y+ L++GL    ++
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRV 256

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +FR M + GV  +L  YN+L+    K  +++R  +   EM      P+  +F  +
Sbjct: 257 EEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTI 316

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           MD L K  +  AA   F  M + G  P++  YN LID + + G+  +A  +  EM +   
Sbjct: 317 MDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGF 376

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  TYN LI  L   GQ++ A  +L++M   G   +VVTYN L+D   K G+ ++A  
Sbjct: 377 IPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  QM +KGVEP+ ++++  IDG      +D A+ L+ +M       D  ++  LI    
Sbjct: 437 LFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAH 496

Query: 411 KDGNMKETLRLYKE 424
           + G+ +   +L  E
Sbjct: 497 RAGDTELEAQLKHE 510



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 8/249 (3%)

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V  +  LID     G+ E+A  V  ++ +KG + +   ++ LI    ++G +D+AM ++
Sbjct: 64  TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM IK   PD   +  L++ L K G ++E    +  MLE  +TP++ T + L+    K 
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G++  AL  F E   +   G+  P+ V Y  ++ ALC  G++  A KLF  M  D   PD
Sbjct: 184 GQLDMALGLFAEMKRR---GF-QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           + TY+T++ GL ++ R+ +   +  +M+  G+  D V    ++    + G++    R  +
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWK 296

Query: 568 FLKE-SRIG 575
            +KE SR G
Sbjct: 297 LMKEMSRKG 305


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 259/536 (48%), Gaps = 12/536 (2%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           D+ + LL+  +P  + Y++   L ++     + SV     +A S    +  A       +
Sbjct: 85  DLFDELLQRARPGSI-YALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARA----GAKK 139

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P I     L++     G  +  +    +++  GL A  VT+  L+   C +     A+
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 140 NL-FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYTYNALM 196
           N+    M + G  P V  YT L+ GLC E K  EA  +   M E G    PN+ +Y  ++
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+ K  DV +A   + +ML H + PNVVT   ++DGLCKV  +  A      M    + 
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   YN LI G+  +G   EA+ +  EM +    P+V TY++LI  LC  G    A  +
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M + G   N  TY SL+ GY  EG++    +V   M + G+ P    F+  I   CK
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCK 439

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   + +M  +  +PD+V +T +IDGL K G + + +  + +M++  ++P + T
Sbjct: 440 CGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIIT 499

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LIHG   +G+   A   F E  D+       PN   + ++I  L  +G++ +A KLF
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRG----IPPNVNTFNSMIDKLFKEGKVTEARKLF 555

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             M     +P+  +Y TM+ G   A  + +VM LL DM+ +G+ P AV    ++ G
Sbjct: 556 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 237/490 (48%), Gaps = 26/490 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG--LVADVVTYGVLIDCCCGQGDVMKAL 139
           P + +   LL GL  + K +   E    M   G     +VV+Y  +I     +GDV KA 
Sbjct: 213 PDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAY 272

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF +M+D GI P VV    +I GLC    M +AE++ + M +  ++PN  TYN+L+ GY
Sbjct: 273 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 332

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                   A+    EM     +PNVVT+ +L+D LCK G    A   F  M + G  PN 
Sbjct: 333 LSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNA 392

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  L+ G+   GNL +  ++   M +  + P    +NI I   C  G+L+ A     K
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNK 452

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M ++G + ++V Y ++IDG CK G ++ A+S   QM + G+ P+++TF++LI G    G 
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + A  L+ EM+ + + P+V  F ++ID L K+G + E  +L+  M  A   P+V + ++
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +IHG F  G +   +                 + +L      A+ ++        L   M
Sbjct: 573 MIHGYFIAGEVGEVMKLL-------------DDMLLIGLKPTAVTFN-------TLLDGM 612

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            S  L+PD  T  T++       R+ D++ L  +M+      D +   + +RG      +
Sbjct: 613 VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVT----V 668

Query: 560 KSAFRCSEFL 569
           K+++ CS  +
Sbjct: 669 KASYHCSSVV 678



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 198/394 (50%), Gaps = 20/394 (5%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           Y++F  +    IP  N    +++I    ++  +++A  V +++    ++P     N+L++
Sbjct: 272 YTLFCKMLDHGIPP-NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 330

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G +  G++       +EM   G   +VVTY +LIDC C  G   +A  +F+ MI  G +P
Sbjct: 331 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKP 390

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  L+HG   E  +V+  ++   M + G+ P  + +N  +  YCK   ++ A   +
Sbjct: 391 NASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTF 450

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           ++M      P++V +  ++DGLCK+G L  A + F  M   G+ P+I  +N LI G    
Sbjct: 451 NKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALH 510

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G   +A  L  EM    I P+V T+N +I  L   G++  A  L   M + G   NVV+Y
Sbjct: 511 GKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSY 570

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++I GY   G++ + + +   M   G++P  VTF++L+DG                MV 
Sbjct: 571 NTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVS 614

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
             L PDVV    LID   +DG +++ L L++EML
Sbjct: 615 MGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 198/438 (45%), Gaps = 17/438 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCN-------ENKMVEAESMFRSMRECG---VVP 187
           AL+LFDE++ +    ++     L+  +          +    A SMF  M   G   V P
Sbjct: 83  ALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAP 142

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++ T+  L+   C    +N       +++   L+   VTF  L+  LC       A N  
Sbjct: 143 DIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIV 202

Query: 248 VH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKFEISPDVFTYNILIKGL 304
           +  M + G  P++F Y  L+ G C      EA  L   M  +     P+V +Y  +I G 
Sbjct: 203 LRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGF 262

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G +  A  L  KM   GI  NVVT NS+IDG CK   M+KA +V  QM ++ + PN 
Sbjct: 263 FKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 322

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            T++SLI G   +G    A+ +  EM      P+VV ++ LID L K G   E   ++  
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M+++   P+  T  SL+HG    G + +  N    K      G     HV +   I A C
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNV---KDLMVQNGMRPGRHV-FNIEIYAYC 438

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++ +AS  F+ M+     PD   YTT++ GL +  R+ D M     MI  G+ PD +
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDII 498

Query: 545 INQVMVRGYQENGDLKSA 562
               ++ G+  +G  + A
Sbjct: 499 TFNTLIHGFALHGKWEKA 516



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 10/234 (4%)

Query: 348 ALSVCSQMTEKG---VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           A+S+ ++M   G   V P++ TF  LI   C AG ++       +++   L    V FT 
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 405 LIDGLSKDGNMKETLRL-YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           L+  L  +    + + +  + M E   TP VF+ ++L+ GL    +   A        + 
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAE- 243

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            DG  C PN V Y  +I     +G + KA  LF  M    + P+  T  +++ GL + + 
Sbjct: 244 -DGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE-SRIGS 576
           M     +L  MI   I+P+      ++ GY  +G    A R    LKE SR G 
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVR---ILKEMSRDGQ 353


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 218/390 (55%), Gaps = 10/390 (2%)

Query: 32  HHVCYSVFNALNSLEI----PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPA 83
            H+C S      +LE+    P+ N   ++T+I  F   G ++ AL + R++     + P 
Sbjct: 162 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 220

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
                 +++G  K G+ D   + ++EM+  G V  + V Y  LI   C QG +  AL   
Sbjct: 221 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 280

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D M+++G+  TV  Y +L+H L  + +  EA  +   M   G+  +++TYN L++G+CK 
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKE 340

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V +ALE +  M    ++  VVT+  L+  L K G+++     F    + G+ P++ +Y
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI+ H  +GN+  A  +  EMEK  I+PD  TYN L++GLC +G+++ A  L+ +M K
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 460

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            GI  ++VTYN+LI GY  +GD++ AL + ++M  KG  P ++T+++LI G CK G  D 
Sbjct: 461 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 520

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +  EMV   + PD   + +LI+GL+ +
Sbjct: 521 AENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 244/488 (50%), Gaps = 15/488 (3%)

Query: 37  SVFNALNSLEI-PKFN--PSVFSTLII-AFSEMGHIEEALWVYRKIEVLPAIQACNALLN 92
           S   AL+ L + P  +  PS    L++ A + +     +L +Y +++ L ++    A L+
Sbjct: 69  SADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSL-SLPISTASLH 127

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L+        +  + +M    L     T+ +++   C  G   +AL L  +M      P
Sbjct: 128 PLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RP 183

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEF 211
             V Y  +I G C+  ++  A  + R MRE  G+ PN YTY  ++ G+CKV  V+ A++ 
Sbjct: 184 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 243

Query: 212 YHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           + EML    ++P  V +  L+ G C  G+L  A  +   M + GV   +  YN L+    
Sbjct: 244 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 303

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G   EA  L  EM    ++ DVFTYNILI G C  G ++ A  + + M + G+ A VV
Sbjct: 304 MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 363

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TY SLI    K+G +++   +  +   +G+ P++V +++LI+    +GNID A  +  EM
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K + PD V +  L+ GL   G + E  +L  EM +  I P + T ++LI G    G +
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +AL    E  +K   G+ +P  + Y A+IQ LC +GQ   A  +  +M  + + PD+ T
Sbjct: 484 KDALRIRNEMMNK---GF-NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 539

Query: 511 YTTMLRGL 518
           Y +++ GL
Sbjct: 540 YISLIEGL 547



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 203/407 (49%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF +M    +      + I++  LC+  K   A  + R M      PN  TYN ++ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  AL+   EM     + PN  T+G ++ G CKVG +  A   F  M   G V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P   +YN LI G+C  G L  A+     M +  ++  V TYN+L+  L   G+   A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M  +G+  +V TYN LI+G+CKEG+++KAL +   M+ +GV   VVT++SLI    
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +     L+ E V + + PD+V++ ALI+  S  GN+     +  EM + +I P   
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ GL   GR+  A     E T +       P+ V Y  +I      G +  A ++
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRG----IQPDLVTYNTLISGYSMKGDVKDALRI 489

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            ++M +    P   TY  +++GL +  +  D   ++ +M++ GI PD
Sbjct: 490 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 201/407 (49%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A ++F  M    +     T+N ++   C      RALE  
Sbjct: 118 SLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 177

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA +    M  + G+ PN + Y  +I G CK
Sbjct: 178 RQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 233

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + EA+ +  EM  K E+ P+   YN LI G C  G+L+ A     +M + G+   V 
Sbjct: 234 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 293

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +G   +A  +  +M  KG+  +V T++ LI+G CK GN+  A+ ++  M
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENM 353

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             + +   VV +T+LI  LSK G ++ET +L+ E +   I P +   ++LI+    +G I
Sbjct: 354 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 413

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A KL  +M    ++PD  T
Sbjct: 414 DRAFEIMGEMEKKR----IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    +++G  +NG
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 10/359 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +  A+ +  EM E+  I+P+ +TY  +I G C VG+++ A  +  +M  +G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
               V YN+LI GYC +G ++ AL    +M E+GV   V T++ L+      G    A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L  DV  +  LI+G  K+GN+K+ L +++ M    +  +V T +SLI+ L 
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G++      F E   +       P+ VLY A+I +    G I +A ++  +M    + 
Sbjct: 374 KKGQVQETDKLFDEAVRRG----IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD+ TY T++RGL    R+ +   L+ +M K GI PD V    ++ GY   GD+K A R
Sbjct: 430 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 488



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 164/294 (55%), Gaps = 3/294 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ LI  + + G ++ AL +  R +E  V   +   N L++ L   G+    +E  EEM
Sbjct: 259 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 318

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  DV TY +LI+  C +G+V KAL +F+ M  +G+  TVV YT LI+ L  + ++
Sbjct: 319 GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 378

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E + +F      G+ P+L  YNAL++ +    +++RA E   EM    + P+ VT+  L
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 438

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M GLC +G +  A      M K G+ P++  YN LI G+   G++ +A+ + +EM     
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +P + TYN LI+GLC  GQ + AE ++++M + GI  +  TY SLI+G   E +
Sbjct: 499 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 161/308 (52%), Gaps = 10/308 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L ++M +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL +  +M E+G + PN  T+ ++I G CK G +D A+ ++ EM+ K  V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    G +   L     M+E  +  +V T + L+H LF +GR + A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY- 312

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  ++  G   + +   Y  +I   C +G + KA ++F +M    +R    TYT+++
Sbjct: 313 ---ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 369

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
             L +  ++ +   L  + ++ GI PD V+   ++  +  +G++  AF     +++ RI 
Sbjct: 370 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429

Query: 576 SSETEGHT 583
             +   +T
Sbjct: 430 PDDVTYNT 437


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 248/477 (51%), Gaps = 10/477 (2%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  + ++G +E+AL ++ ++I     P     N  +NGL +        +  + MV 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G   DV TY ++++C C  G + +A  + ++M+D+G  P +  +  LI  LC  N++ E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   GV P++YT+N L++  CKV D + AL  + EM +    P+ VT+  L+D
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC +G+L  A +    M   G   +   YN +IDG CK   + EA  +  +M+   IS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  T+N LI GLC   +++ A  L+ +M  EG+  N +TYNS++  YCK+GD++KA  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G E +VVT+ +LI+G CKAG    A+ +   M IK + P    +  ++  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
            N+++ L L++EM E    P   T   +  GL +  G I  A +F LE  DK      S 
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             +L   ++  L  D   ++A ++   M   +LR  +    + +RG L+ ++  D +
Sbjct: 675 FRMLAEGLLN-LGMDDYFIRAIEII--MEKVDLRESD---VSAIRGYLKIRKFYDAL 725



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 244/530 (46%), Gaps = 44/530 (8%)

Query: 74  VYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           +  +++ L  IQA     N LLN L++  K   +   Y EM   G+  DVVT+  L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    V  A+ + +EM  +G+ P    +T L+ G   E  +  A  +   M E G     
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 190 YTYNALMDGYCKVADVNRALEFYHE----------------------------------- 214
            T N L++GYCK+  V  AL +  +                                   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+     P+V T+ ++++ LCK G+L  A      M   G  P+I  +N LI   C    
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+ L  ++    +SPDV+T+NILI  LC VG    A  L ++M   G   + VTYN+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LID  C  G + KAL +   M   G   + +T++++IDG CK   I+ A  ++ +M ++ 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  + + F  LIDGL KD  + +   L  +M+   + P+  T +S++    K G I  A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +        T  G+   + V Y  +I  LC  G+   A K+   MR   +RP    Y  +
Sbjct: 552 DIL---ETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENGDLKSAF 563
           L+ L R   + D + L  +M ++G  PDA+  +++ RG  +  G +K AF
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 657



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 265/559 (47%), Gaps = 16/559 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           SV++ + +  I K +   F+TL+ A      +  A+ +  ++    V P       L+ G
Sbjct: 167 SVYSEMGARGI-KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG 225

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            +++G  ++       M+  G  A  VT  VLI+  C  G V  AL    + I  G EP 
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            + Y   ++GLC  + +  A  +   M + G  P+++TYN +++  CK   +  A    +
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M+     P++ TF  L+  LC    L  A +    +   GV P+++ +N LI+  CK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +   A+ L  EM+    +PD  TYN LI  LC +G+L  A  LL+ M   G   + +TYN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++IDG CK+  +E+A  V  QM  +G+  N +TF++LIDG CK   ID A  L  +M+ +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L P+ + + +++    K G++K+   + + M        V T  +LI+GL K GR   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           L     +  +  G   +P    Y  ++Q+L     I  A  LF +M      PD  TY  
Sbjct: 586 LKVL--RGMRIKGMRPTPKA--YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641

Query: 514 MLRGLLRA----KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           + RGL R     K   D M+   +M+  G +P+    +++  G    G      R  E +
Sbjct: 642 VFRGLCRGGGPIKEAFDFML---EMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698

Query: 570 KESRIGSSETEGHTTRSFL 588
            E ++   E++    R +L
Sbjct: 699 ME-KVDLRESDVSAIRGYL 716



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 226/454 (49%), Gaps = 6/454 (1%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           L G+ AD V Y  L++    +G  MK L +++ EM  +GI+P VV +  L+  LC  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  M   M   GV P+  T+  LM G+ +   +  AL     ML        VT  VL
Sbjct: 198 RTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G +  A  +       G  P+   YN  ++G C+  ++  A+ +   M +   
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDVFTYNI++  LC  GQLE A+G+L +M   G L ++ T+N+LI   C    +E+AL 
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  Q+T KGV P+V TF+ LI+  CK G+   A+ L+ EM      PD V +  LID L 
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G + + L L K+M       S  T +++I GL K  RI  A   F    D+ D    S
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF----DQMDLQGIS 493

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            N + +  +I  LC D +I  A +L + M S+ L+P+N TY ++L    +   +     +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           L  M   G   D V    ++ G  + G  + A +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 72/362 (19%)

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE----------------- 323
           L + + + + +P    Y  +I+ L  VG L+  + L+ +M +E                 
Sbjct: 61  LNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYE 120

Query: 324 --------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
                               GI A+ V YN L++   +   M+   SV S+M  +G++P+
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF++L+   C+A  +  A+ +  EM  + + PD   FT L+ G  ++G+++  LR+  
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCS 470
            MLE   + +  TV+ LI+G  K GR+ +AL +  ++    DG             G C 
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI--ADGFEPDQITYNTFVNGLCQ 298

Query: 471 PNHV--------------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +HV                     Y  ++  LC +GQ+ +A  + + M      PD  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + T++  L    R+ + + L   +   G+ PD     +++    + GD   A R  E +K
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 571 ES 572
            S
Sbjct: 419 NS 420


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 243/498 (48%), Gaps = 11/498 (2%)

Query: 48  PKFNPSVFSTLIIAF---SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           P    + ++ LI A    +++ H +  L +  +    P     N+L+ G  +  + D   
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQ 184

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + +++M L G   D V+Y  LI+  C  G V +AL LF E+     +P +  +  L+ GL
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGL 240

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  E   M + M+E G  P    Y AL+D +C+      A +  +EM  + L P  
Sbjct: 241 CDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCA 300

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT   +++  C+ G +  A   F  M   G  PN++ YN ++ G C  G +++AM+L  +
Sbjct: 301 VTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQ 360

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  + PDV TYN+LI+G C  G +E A  LL+ M   G+ A+  TYN LID  CK G 
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A S+   +  +G+ PN VTF+++I+G CK G  D A     +MV     PD   ++ 
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I+ L K    +E L    EML+  + PS    + +I  LFK      A   + +     
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               CSP+ V Y   ++A C +G++ +A  +  +M+   +  D   Y T++ G     + 
Sbjct: 541 ----CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 525 LDVMMLLADMIKMGIVPD 542
              + +L  M  +  +P+
Sbjct: 597 DHAVTILKHMTGVASMPN 614



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 201/443 (45%), Gaps = 8/443 (1%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            TY  LI   C + D+  A      M+  G  P    +  LI G C   ++  A+ +F  
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDK 189

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G   +  +Y AL++G+C+   V+ ALE + E+     QP++ T   L+ GLC    
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLCDARR 245

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                     M + G  P    Y  L+D  C+     EA  + +EM    + P   T   
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++   C  G++ GA  + + M  +G   NV TYN+++ G+C  G + KA+++  QM E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           VEP+VVT++ LI GQC  G+I++A  L   M    L  D   +  LID L K G + E  
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L+  +    I P+  T +++I+GL K G+   A  F     +K     C+P+   Y+  
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFL----EKMVSAGCAPDTYTYSPF 481

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I+ LC      +      +M   +++P    YT ++  L + +       +   M+ +G 
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 540 VPDAVINQVMVRGYQENGDLKSA 562
            PD V     VR Y   G L  A
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEA 564



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/533 (26%), Positives = 244/533 (45%), Gaps = 30/533 (5%)

Query: 69  EEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           EE L++ +K++ L   PA +A  AL++   ++ K +   +   EM   GLV   VT   +
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ++  C +G +  A+ +F+ M  KG EP V  Y  ++ G CN  K+ +A ++   MRECGV
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P++ TYN L+ G C    +  A      M  + L  +  T+ VL+D LCK G++  A +
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  +   G+ PN   +N +I+G CK G    A +   +M     +PD +TY+  I+ LC
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 306 GV-GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G  EG    + +M ++ +  + V Y  +ID   KE +   A  +  QM   G  P+V
Sbjct: 487 KTKGSREGL-SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+++ +   C  G +  A  +  EM    ++ D + +  LIDG +  G     + + K 
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605

Query: 425 MLEAKITPSVFT----------------VSSLIHGLFKNGRISNALNFF-LEKTDKTDGG 467
           M      P+ FT                V      ++K   +++    F L K +     
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSS 665

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             +     Y AI++    + ++ + + L S M+ D+L  +   YT+++    + +   D 
Sbjct: 666 ARA-----YLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDA 720

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             LL  MI  G +P+ +  Q ++ G+   G    A R  E  +  R     T+
Sbjct: 721 WALLCSMIGHGFLPNLISYQYLLSGFTAEG---QADRAKEIFRGLRWKEYNTD 770



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 213/492 (43%), Gaps = 55/492 (11%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P    C A++N   ++G+       +E M L G   +V TY  ++   C  G V KA+
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L D+M + G+EP VV Y +LI G C +  +  A  + R M   G+  + YTYN L+D  
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V+ A   +  + +  ++PN VTF  +++GLCK G+   A  F   M   G  P+ 
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI----------------------------- 290
           + Y+  I+  CK     E +S   EM + ++                             
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ 535

Query: 291 ------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
                 SPDV TY   ++  C  G+L  AE ++ +M K GI+ + + YN+LIDG+   G 
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595

Query: 345 MEKALSVCSQMTEKGVEPNVVTF----------SSLIDGQCKAGNIDAAMGLYT-----E 389
            + A+++   MT     PN  TF              D   K  ++   + L       E
Sbjct: 596 TDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFE 655

Query: 390 MVIKSLVPDVV-VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           ++ K+ VP     + A+++G S++  + E   L   M E  +  +    +SL++   K  
Sbjct: 656 LMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLR 715

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
              +A            G    PN + Y  ++     +GQ  +A ++F  +R      D 
Sbjct: 716 MYPDAWALLCSMI----GHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDE 771

Query: 509 CTYTTMLRGLLR 520
             +  ++ GL+R
Sbjct: 772 IVWKIIIDGLIR 783



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 176/388 (45%), Gaps = 44/388 (11%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQ-PNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           T+ +L+  + + A     L  +  M HH    P   T+  L+  LC+  +LR A  +   
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 250 MAKFGVFPNIFVYNCL-----------------------------------IDGHCKAGN 274
           M + G  P+ F +N L                                   I+G C+ G 
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA+ L  E+E+    PD++T+  L+KGLC   + E    +LQKM + G       Y +
Sbjct: 215 VDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+D +C+E   E+A  + ++M + G+ P  VT +++++  C+ G +  A+ ++  M +K 
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             P+V  + A++ G    G + + + L  +M E  + P V T + LI G   +G I +A 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                     +G   + +   Y  +I ALC  G++ +A  LF  +    +RP++ T+ T+
Sbjct: 391 RLL----RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           + GL +  +       L  M+  G  PD
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPD 474



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 207/500 (41%), Gaps = 64/500 (12%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
             S+++    P+V++   ++  F  +G + +A+ +    R+  V P +   N L+ G   
Sbjct: 323 FESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G  +S +     M   GL AD  TY VLID  C  G V +A +LFD +  +GI P  V 
Sbjct: 383 DGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  +I+GLC   K   A +    M   G  P+ YTY+  ++  CK       L F  EML
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEML 502

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +++P+ V + +++D L K      A   +  M   G  P++  Y   +  +C  G L 
Sbjct: 503 QKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLH 562

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY--------------- 321
           EA ++  EM+K  I  D   YN LI G   +G+ + A  +L+ M                
Sbjct: 563 EAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILL 622

Query: 322 ------------------------------------KEGILANVVTYNSLIDGYCKEGDM 345
                                               K  + ++   Y ++++G+ +E  +
Sbjct: 623 RHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRL 682

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++  S+ S M E  +  N   ++SL++  CK      A  L   M+    +P+++ +  L
Sbjct: 683 DEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYL 742

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR--ISNALNFFLEKTDK 463
           + G + +G       +++ +   +          +I GL + G   + + +   LE+   
Sbjct: 743 LSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMK- 801

Query: 464 TDGGYCSPNHVLYAAIIQAL 483
                C P+   YA + + L
Sbjct: 802 -----CKPSDETYAMLTEEL 816



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 11/325 (3%)

Query: 245 NFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
             F HM   G   P    YN LI   C+  +L  A    S M +    PD FT+N LI G
Sbjct: 114 RLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C   QL+ A+ L  KM   G   + V+Y +LI+G+C+ G +++AL +  ++     +P+
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPD 229

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           + T ++L+ G C A   +  + +  +M      P    + AL+D   ++   +E  ++  
Sbjct: 230 MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLN 289

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM +  + P   T +++++   + GR+S A+  F  ++ K  G  C PN   Y A++Q  
Sbjct: 290 EMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF--ESMKLKG--CEPNVWTYNAMVQGF 345

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G++ KA  L   MR   + PD  TY  ++RG      +     LL  M   G+  D 
Sbjct: 346 CNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQ 405

Query: 544 VINQVMVRGYQENGDLKSAFRCSEF 568
               V++    + G +  A  CS F
Sbjct: 406 YTYNVLIDALCKTGKVDEA--CSLF 428


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 247/503 (49%), Gaps = 7/503 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK  + P     N L+NGL+K+ K       + EM++  L  + VTY +LID  C  G+ 
Sbjct: 72  RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L D M  KG+ P  V Y  L+ GL    K   A+S+   +R  G+V     Y A+
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG CK   ++ +L+    M      P+++TF VL++G CK G+++ A      M K G+
Sbjct: 192 IDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGL 251

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI   CK G++ EA    + M +     D F  N+LI  LC  G++  AE 
Sbjct: 252 APNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAED 311

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            ++ M    +  N +T++ +I+GY   GD  KA S+  +M + G  P+  T+ SL+ G C
Sbjct: 312 FMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLC 371

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K GN+  A  L  ++       D  ++  ++    K G + + + L+ EM++  + P   
Sbjct: 372 KGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSH 431

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + ++ GL + G++  AL FF +   +   G  SPN V+Y ++   L   GQ   AS +
Sbjct: 432 TYAIILAGLSRKGKMVPALLFFEKALAR---GTLSPNKVMYTSLFDGLFKVGQSNAASYI 488

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           + +M    + PD      +L G  R  +M  V  L   M    + P      +++ GY +
Sbjct: 489 YEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSK 548

Query: 556 NGDLKSAFRCSEFLK-ESRIGSS 577
             DL    +CS+F    +R+G S
Sbjct: 549 KKDL---LKCSKFYNIMTRMGIS 568



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 232/483 (48%), Gaps = 5/483 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P I   N +LN   KKG++ +  +  + M   G+ ADV TY +LID  C      K   
Sbjct: 7   VPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYL 66

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L  +M  + I P    Y  LI+GL  E K+  A  +F  M    + PN  TYN L+DG+C
Sbjct: 67  LLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHC 126

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
              +  +AL     M    L+P+ V +G L+ GL K+ +   A +    +   G+     
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYR 186

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  +IDG CK G L E++ L   M K   SPD+ T+++LI G C  G+++ A+ ++ KM
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           +K G+  N V Y +LI   CK+GD+ +A    + MT  G + +    + LI   C+AG +
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRV 306

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A      M    L P+ + F  +I+G    G+  +   ++ EM++    PS FT  SL
Sbjct: 307 AEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSL 366

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL K G +  A         K      + +  +Y  I+   C  G++  A  LF +M 
Sbjct: 367 LKGLCKGGNLREAKKLLY----KLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMV 422

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV-PDAVINQVMVRGYQENGDL 559
             N+ PD+ TY  +L GL R  +M+  ++     +  G + P+ V+   +  G  + G  
Sbjct: 423 QFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQS 482

Query: 560 KSA 562
            +A
Sbjct: 483 NAA 485



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 274/628 (43%), Gaps = 80/628 (12%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VL 81
           L+K RK       VFN +  L +   N   ++ LI    + G+ E+AL +   +E   + 
Sbjct: 90  LMKERKIGGAT-RVFNEMLMLNLSP-NRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLR 147

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P      ALL+GL K  KFD      E + + G+V     Y  +ID  C  G + ++L L
Sbjct: 148 PDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQL 207

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D M   G  P ++ +++LI+G C   K+  A+ +   M + G+ PN   Y  L+   CK
Sbjct: 208 LDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCK 267

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D+  A   Y  M       +     VL+  LC+ G +  A +F  HM+   + PN   
Sbjct: 268 KGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSIT 327

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           ++C+I+G+   G+  +A S+  EM K    P  FTY  L+KGLC  G L  A+ LL K++
Sbjct: 328 FDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLH 387

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-------------------KG--- 359
                 +   YN+++   CK G +  A+++  +M +                   KG   
Sbjct: 388 HIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMV 447

Query: 360 --------------VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                         + PN V ++SL DG  K G  +AA  +Y EM  K + PD +   A+
Sbjct: 448 PALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAV 507

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DG S+ G M++  +L+ +M    +TPS+ T + L+HG  K   +     F+   T    
Sbjct: 508 LDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMG- 566

Query: 466 GGYCSPNHVLYAAIIQALCYDG--------------------------------QILKAS 493
               SP+ +   +II  LC  G                                +  K  
Sbjct: 567 ---ISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMG 623

Query: 494 KLFSDMRSDNLR---PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           K F  +   NL    PD  TY  +  GL RA  + +  +LL DM++ GI P +     ++
Sbjct: 624 KAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLI 683

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSE 578
            G    GD++ AFR  + ++   + S +
Sbjct: 684 NGMCRMGDIQGAFRLKDEMEAIGVSSWD 711



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 219/453 (48%), Gaps = 10/453 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G V  +VTY  +++ CC +G    A +L D M  KGIE  V  Y +LI  LC  N+  + 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + + MR+  + PN +TYN L++G  K   +  A   ++EML  NL PN VT+ +L+DG
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C  G    A      M   G+ P+   Y  L+ G  K      A SL   ME+  +S  
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSL---MERIRMSGM 181

Query: 294 VF---TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           V     Y  +I GLC  G L+ +  LL  M+K+G   +++T++ LI+G+CK G ++ A  
Sbjct: 182 VVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKE 241

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M + G+ PN V +++LI   CK G+I  A   Y  M       D  +   LI  L 
Sbjct: 242 VICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLC 301

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G + E     + M    + P+  T   +I+G    G + +AL  F    +    G+C 
Sbjct: 302 RAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGY---GILGDALKAFSMFDEMIKLGHC- 357

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+H  Y ++++ LC  G + +A KL   +       D   Y T+L    +  ++ D + L
Sbjct: 358 PSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVAL 417

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +M++  ++PD+    +++ G    G +  A 
Sbjct: 418 FGEMVQFNVLPDSHTYAIILAGLSRKGKMVPAL 450



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 259/568 (45%), Gaps = 43/568 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFY 107
           N  +++TLI    + G I EA   Y  +           CN L++ L + G+     +F 
Sbjct: 254 NYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFM 313

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M    L  + +T+  +I+     GD +KA ++FDEMI  G  P+   Y  L+ GLC  
Sbjct: 314 RHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKG 373

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA+ +   +       +   YN ++   CK   ++ A+  + EM+  N+ P+  T+
Sbjct: 374 GNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTY 433

Query: 228 GVLMDGLCKVGELRAAGNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +++ GL + G++  A  FF   +A+  + PN  +Y  L DG  K G    A  +  EME
Sbjct: 434 AIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEME 493

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I+PD    N ++ G   +G++E  E L  KM    +  ++ TYN L+ GY K+ D+ 
Sbjct: 494 HKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLL 553

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK------------- 393
           K     + MT  G+ P+ +T  S+I G CK+G +D    +  +M+++             
Sbjct: 554 KCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLI 613

Query: 394 ----------------------SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                                  ++PDV  + A+  GL++   ++E+  L  +MLE  IT
Sbjct: 614 TNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGIT 673

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+     SLI+G+ + G I  A        D+ +    S   V  +A+++ L   G++ +
Sbjct: 674 PTSTQYISLINGMCRMGDIQGAFRL----KDEMEAIGVSSWDVAESAMVRGLAQCGKVEE 729

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  +   M    L P   T+TT++  L +  ++ + + L   M   G+  D V   V++ 
Sbjct: 730 AMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLIS 789

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSET 579
           G   +GD  +AF   E +KE  +  + T
Sbjct: 790 GLCADGDALAAFNLYEEMKERGLWPNTT 817



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 224/504 (44%), Gaps = 43/504 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  +I  +  +G   +A  ++ ++  L   P+     +LL GL K G      +  
Sbjct: 324 NSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLL 383

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            ++       D   Y  ++   C +G +  A+ LF EM+   + P    Y I++ GL  +
Sbjct: 384 YKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRK 443

Query: 168 NKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            KMV A   F +++    + PN   Y +L DG  KV   N A   Y EM H  + P+ + 
Sbjct: 444 GKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIA 503

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              ++DG  ++G++      F+ M    + P++  YN L+ G+ K  +L +     + M 
Sbjct: 504 INAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMT 563

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  ISPD  T + +I GLC  G L+    +L+KM  E  L + +T N LI   C+   M 
Sbjct: 564 RMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMG 623

Query: 347 KALSVCS-----------------------------------QMTEKGVEPNVVTFSSLI 371
           KA  + +                                    M E+G+ P    + SLI
Sbjct: 624 KAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLI 683

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C+ G+I  A  L  EM    +    V  +A++ GL++ G ++E + +   ML+ ++ 
Sbjct: 684 NGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLI 743

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V T ++L+H L K  ++S AL        K        + V Y  +I  LC DG  L 
Sbjct: 744 PTVATFTTLMHMLCKKAKLSEALKL----RGKMALYGVKLDVVAYNVLISGLCADGDALA 799

Query: 492 ASKLFSDMRSDNLRPDNCTYTTML 515
           A  L+ +M+   L P+  TY T++
Sbjct: 800 AFNLYEEMKERGLWPNTTTYCTLI 823



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 209/456 (45%), Gaps = 40/456 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + ++++T++    + G + +A+ ++ ++    VLP       +L GL +KGK      F+
Sbjct: 394 DTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453

Query: 108 EEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           E+ +  G L  + V Y  L D     G    A  +++EM  KGI P  +    ++ G   
Sbjct: 454 EKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSR 513

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             KM + E +F  M+   + P+L TYN L+ GY K  D+ +  +FY+ M    + P+ +T
Sbjct: 514 MGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLT 573

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAK---------------------------------- 252
              ++ GLCK G L         M                                    
Sbjct: 574 CHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKN 633

Query: 253 -FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+ P++  YN +  G  +A  L E+  L  +M +  I+P    Y  LI G+C +G ++
Sbjct: 634 LLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQ 693

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           GA  L  +M   G+ +  V  ++++ G  + G +E+A+ V   M +K + P V TF++L+
Sbjct: 694 GAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLM 753

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              CK   +  A+ L  +M +  +  DVV +  LI GL  DG+      LY+EM E  + 
Sbjct: 754 HMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLW 813

Query: 432 PSVFTVSSLIHGLFKN-GRISNALNFFLEKTDKTDG 466
           P+  T  +LI  +  N G +   L  +LE+ +K  G
Sbjct: 814 PNTTTYCTLIDAISTNEGEVEERLLVYLEQFEKLVG 849



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 6/211 (2%)

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G  P +VT++++++  CK G   AA  L   M  K +  DV  +  LID L K+  
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             +   L K+M +  I P+ FT ++LI+GL K  +I  A   F E          SPN V
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLN----LSPNRV 116

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I   C  G   +A +L   M +  LRPD   Y  +L GL +  +  D+   L + 
Sbjct: 117 TYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAK-FDIAKSLMER 175

Query: 535 IKM-GIVPDAVINQVMVRGYQENGDLKSAFR 564
           I+M G+V        M+ G  ++G L  + +
Sbjct: 176 IRMSGMVVGYRAYTAMIDGLCKHGLLDESLQ 206



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/147 (19%), Positives = 69/147 (46%), Gaps = 4/147 (2%)

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++ T +++++   K GR   A +      D+ +      +   Y  +I  LC + +  K
Sbjct: 8   PTIVTYNTILNWCCKKGRYKAASDLI----DRMESKGIEADVCTYNMLIDDLCKNNRSAK 63

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
              L   MR   + P+  TY T++ GL++ +++     +  +M+ + + P+ V   +++ 
Sbjct: 64  GYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILID 123

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSE 578
           G+ + G+ + A R  + ++   +   E
Sbjct: 124 GHCDCGNFEQALRLLDVMEAKGLRPDE 150


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 258/518 (49%), Gaps = 8/518 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    + G +EEAL    ++   +V P++     L+NGL+K  KFD      
Sbjct: 275 NVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVL 334

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   +   +  LID    +G++  AL + D+M  KG++P  V +  L+ G C  
Sbjct: 335 VEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRT 394

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N+M +AE +   +    +  N    + ++   CK +  + AL+    +L  N++ N    
Sbjct: 395 NQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLL 454

Query: 228 GVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +L+ GLCK G+   A + +  +A K G+  N    N L+ G C+ GN+ E   +C EM 
Sbjct: 455 TLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMV 514

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +  D  +YN LI G C  G++E A  L +KM K+G   +  TYN L+ G   +G M+
Sbjct: 515 ERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMD 574

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               V  +  + GV PN+ T++ +++G C A  ID A+ L+ ++V   +    VV+  LI
Sbjct: 575 DVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILI 634

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
              SK GN  E  +L   M  + I P++FT SS+IHG+  N  +  A   F E  ++   
Sbjct: 635 AAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEG-- 692

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y A+I   C  GQ+ +   +  +M S+ ++P+  TYT M+ G  +     +
Sbjct: 693 --LMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKE 750

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              LL +MI  GI PD V   V+ +GY +  +L+   +
Sbjct: 751 ATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 233/479 (48%), Gaps = 17/479 (3%)

Query: 104 WEFYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           W F   M+    G+   + +   L+       ++ K+  +FD M   G+   V  Y   I
Sbjct: 189 WAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAI 248

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           +  C   K+ EA  +F  M E GV+PN+ TYN L+DG CK   +  AL F   M+ + + 
Sbjct: 249 NAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVN 308

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++VT+G+L++GL K  +   A +  V M   G  PN FV+N LIDG+ + GN+ +A+ +
Sbjct: 309 PSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRV 368

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY-- 339
             +M    + P+  T+N L++G C   Q+E AE +L     E +L+NV++ N     Y  
Sbjct: 369 RDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVL-----EYLLSNVLSVNEDACSYVL 423

Query: 340 ---CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV-IKSL 395
              CK    + AL +   +  + ++ N    + L+ G CK G    A+ L+  +   K L
Sbjct: 424 HLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGL 483

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
             +     AL+ GL + GNM+E   + KEM+E  +     + ++LI G  K+G+I  A  
Sbjct: 484 AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA-- 541

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F  K      G+  P+   Y  +++ L   G++    ++  + +   + P+  TY  ML
Sbjct: 542 -FKLKEKMMKQGF-KPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALML 599

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            G   A R+ + + L   ++   +    V+  +++  + + G+   AF+  + ++ S I
Sbjct: 600 EGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNI 658



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 9/365 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVW 104
           K N S+ + L+    + G   EA+ ++ ++     + A     NALL GL ++G  + V+
Sbjct: 448 KVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVF 507

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              +EMV  GLV D ++Y  LI  CC  G + +A  L ++M+ +G +P    Y  L+ GL
Sbjct: 508 PVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGL 567

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            ++ KM +   +    ++ GVVPN+YTY  +++GYC    ++ A+  +++++++ ++ + 
Sbjct: 568 ADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSY 627

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V + +L+    K G    A      M    + P IF Y+ +I G C    + EA  +  E
Sbjct: 628 VVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEE 687

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + P+VF Y  LI G C +GQ++  E +LQ+M    I  N +TY  +IDGYCK G+
Sbjct: 688 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGN 747

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            ++A  + ++M   G+ P+ VT++ L  G CK   ++  +   T + ++      + +T 
Sbjct: 748 TKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEE-----ITYTT 802

Query: 405 LIDGL 409
           L+D L
Sbjct: 803 LVDKL 807



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 195/410 (47%), Gaps = 4/410 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWV--YRKIEVLPAIQ-ACNALLNGLIKKGKFDSVWE 105
           K N    +TL+  F     +E+A  V  Y    VL   + AC+ +L+ L K  KFDS  +
Sbjct: 378 KPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALK 437

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGL 164
             + ++L  +  +     +L+   C  G  ++A++L+  + DK G+         L++GL
Sbjct: 438 IVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGL 497

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    M E   + + M E G+V +  +YN L+ G CK   +  A +   +M+    +P+ 
Sbjct: 498 CERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDT 557

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+  LM GL   G++   G         GV PNI+ Y  +++G+C A  +  A+SL ++
Sbjct: 558 YTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNK 617

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +   ++      YNILI      G    A  L   M    I   + TY+S+I G C    
Sbjct: 618 LVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDL 677

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +E+A  +  +M  +G+ PNV  +++LI G CK G +D    +  EM    + P+ + +T 
Sbjct: 678 VEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTI 737

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +IDG  K GN KE  +L  EM+   I+P   T + L  G  K   +   L
Sbjct: 738 MIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETL 787



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 219/476 (46%), Gaps = 17/476 (3%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
           F+P+  VF+ LI  +S  G++++AL V   + +    P     N LL G  +  + +   
Sbjct: 342 FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAE 401

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  E ++   L  +      ++   C       AL +   ++ + I+    + T+L+ GL
Sbjct: 402 QVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGL 461

Query: 165 CNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           C   K +EA +  FR   + G+  N  T NAL+ G C+  ++        EM+   L  +
Sbjct: 462 CKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLD 521

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            +++  L+ G CK G++  A      M K G  P+ + YN L+ G    G + +   +  
Sbjct: 522 GISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLH 581

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E +   + P+++TY ++++G C   +++ A  L  K+    +  + V YN LI  + K G
Sbjct: 582 EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAG 641

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +  +A  +   M    + P + T+SS+I G C    ++ A G++ EM  + L+P+V  +T
Sbjct: 642 NFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYT 701

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           ALI G  K G M +   + +EM    I P+  T + +I G  K G    A     E    
Sbjct: 702 ALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMI-- 759

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP-DNCTYTTMLRGL 518
                 SP+ V Y  + +  C      K ++L   ++ D   P +  TYTT++  L
Sbjct: 760 --ANGISPDTVTYTVLQKGYC------KENELEETLQGDTAVPLEEITYTTLVDKL 807



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +G+  ++ + N L+    K  ++ K+  V   M   GV  +V T+++ I+  CK G ID 
Sbjct: 200 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 259

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+GL+ +M    ++P+VV +  LIDGL K G ++E L     M+E K+ PS+ T   L++
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K            EK D+                            A+ +  +M S 
Sbjct: 320 GLVK-----------FEKFDE----------------------------ANSVLVEMYSK 340

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              P+   +  ++ G  R   M D + +  DM   G+ P+AV +  +++G+     ++ A
Sbjct: 341 GFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 400

Query: 563 FRCSEFLKESRIGSSE 578
            +  E+L  + +  +E
Sbjct: 401 EQVLEYLLSNVLSVNE 416


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  ++ TYG+LI  CC  G +         +I KG     + +T L+ G
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M + G +PN+++YN L+ G C                      
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 201 ---------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                          K  D+++A   YHEML   + PNVVT+  ++  LCK   +  A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K GV PN   YN ++ G+C +G   EA+    +M    + PDV TYN L+  LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            FS LI    K G +D AM ++++M  + L PD V +  +I  L K G +++ +R +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++ +++P     +SLIH L    +   A    LE  D+   G C  + + + +II + C 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR---GIC-LDTIFFNSIIDSHCK 491

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+++++ KLF  M    ++PD  TY+T++ G   A +M +   LLA M+ +G+ PD V 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 546 NQVMVRGY 553
              ++ GY
Sbjct: 552 YNTLINGY 559



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 260/548 (47%), Gaps = 46/548 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS   L+    +    +EAL + + +     +  P + +   ++NG  K+G  D  +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y EM+  G++ +VVTY  +I   C    + KA+ +   M+  G+ P    Y  ++HG 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  EA    + M   GV P++ TYN+LMD  CK      A + +  M    L+P +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+G L+ G    G L         M + G+ PN +V++ LI  + K G + +AM + S+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--------------------- 323
           M +  ++PD  TY  +I  LC  G++E A    ++M  E                     
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 324 --------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                         GI  + + +NS+ID +CKEG + ++  +   M   GV+P+++T+S+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C AG +D A  L   MV   + PD V +  LI+G  K   M++ L L++EM  + 
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ++P + T + ++ GLF+  R + A   ++  T+       S     Y  I+  LC +   
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST----YNIILHGLCKNNLT 635

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 550 VRGYQENG 557
                E G
Sbjct: 696 AENLIEQG 703



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 252/522 (48%), Gaps = 21/522 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I A  +   +++A+ V     K  V+P  +  N++++G    G+      F 
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P +  Y  L+ G   +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VE   +   M   G+ PN Y ++ L+  Y K   V++A+  + +M    L P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G ++  LCK G +  A  +F  M    + P   VYN LI   C      +A  L  EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N +I   C  G++  +E L   M + G+  +++TY++LIDGYC  G M++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M   G++P+ VT+++LI+G CK   ++ A+ L+ EM    + PD++ +  ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------LEK 460
           GL +         LY  + E+     + T + ++HGL KN     AL  F       L+ 
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             +T           +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M   L+ 
Sbjct: 653 ETRT-----------FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              + ++  L   M + G   ++ +   +VR   + GD+  A
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 180/365 (49%), Gaps = 52/365 (14%)

Query: 243 AGNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFEAMSLCSEMEKF---EISPDVFT 296
           A + F  + + G   +I+  NC    +  H  A     A+S  + M +    E++P++ T
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA----AVSRYNRMARAGADEVTPNLCT 93

Query: 297 YNILIKGLCGVGQLE---GAEG---------------------------------LLQKM 320
           Y ILI   C  G+L+    A G                                 +L++M
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAG 378
            + G + NV +YN L+ G C E   ++AL +   M + G +  P+VV+++++I+G  K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A G Y EM+ + ++P+VV ++++I  L K   M + + +   M++  + P+  T +
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++HG   +G+   A+ F   K   +DG    P+ V Y +++  LC +G+  +A K+F  
Sbjct: 274 SIVHGYCSSGQPKEAIGFL--KKMHSDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+P+  TY T+L+G      ++++  LL  M++ GI P+  +  +++  Y + G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 559 LKSAF 563
           +  A 
Sbjct: 390 VDQAM 394



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 10/285 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V PN+ T+
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    P+VF+ + L+ GL    R   AL       D  DGG C P+ V Y  +I     +
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKE 212

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + KA   + +M    + P+  TY++++  L +A+ M   M +L  M+K G++P+    
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             +V GY  +G  K A     FLK+      E +  T  S + +L
Sbjct: 273 NSIVHGYCSSGQPKEAI---GFLKKMHSDGVEPDVVTYNSLMDYL 314



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 16/258 (6%)

Query: 319 KMYKEG---ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +M + G   +  N+ TY  LI   C  G ++   +    + +KG   + + F+ L+ G C
Sbjct: 78  RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 137

Query: 376 KAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITP 432
                  AM +    M     +P+V  +  L+ GL  +   +E L L + M +      P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V + +++I+G FK G +  A   + E  D+       PN V Y++II ALC    + KA
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG----ILPNVVTYSSIIAALCKAQAMDKA 253

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ + M  + + P+  TY +++ G   + +  + +  L  M   G+ PD V    ++  
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313

Query: 553 YQENGDLKSAFRCSEFLK 570
             +NG      RC+E  K
Sbjct: 314 LCKNG------RCTEARK 325


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 235/493 (47%), Gaps = 14/493 (2%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           EV P       L++ L + G+ D  W+    ++  G V +  +   L+    G+    K 
Sbjct: 265 EVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL-TALGRAREFKR 323

Query: 139 LN-LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR--ECG---VVPNLYTY 192
           +N L  EM +  I+P VV + ILI+ LC   ++ EA  +F  M   E     V P++ TY
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383

Query: 193 NALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           N L+DG CKV      L     M       PN VT+  L+DG CK   + AA   F  M 
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           K GV PN+   N L+DG CK G +  A+   +EM+   +  +  TY  LI+  C V  +E
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L  +M + G   + + Y +LI G  + G +++A  V S+M E G  P++V+F+ LI
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C+   +D A  +  EM    + PD V +  LI   SK G+     RL K+M++  + 
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+V T  +LIH    NG +  A+  F    D +      PN V+Y  +I +LC   Q+  
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIF---RDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L  DM+   ++P+  T+  M +GL     +     L+  M +    PD +  +++  
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE 740

Query: 552 GYQ---ENGDLKS 561
                 E   LKS
Sbjct: 741 WLSAVGETAKLKS 753



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 170/595 (28%), Positives = 269/595 (45%), Gaps = 54/595 (9%)

Query: 28  SRKP--HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ 85
           SR+P  H+    +F    S +IP  + +  + LI  F     ++E+  VY   E+ P+ +
Sbjct: 134 SREPNSHNKLLDLFKTSKSHKIP-LSVNAATLLIRCFGRAQMVDESFLVYN--ELCPSRR 190

Query: 86  AC---NALLNGLIKKGKFDSVWEFYEEMVL--CGLVADVVTYGVLIDCCCGQGDVMKALN 140
                N L++ L +KG+ D      +EM+        +  T  ++      +  V +A++
Sbjct: 191 LTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVD 250

Query: 141 ------LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
                 L  +  +  + P  +  T LI  LC   +   A  +   + + G V    + NA
Sbjct: 251 EEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM---- 250
           L+    +  +  R      EM   ++QPNVVTFG+L++ LCK   +  A   F  M    
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370

Query: 251 -AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVG 308
              F V P++  YN LIDG CK G   E + L   M  +    P+  TYN LI G C   
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            +E A  L  +M K+G+  NVVT N+L+DG CK G +  A+   ++M  KG++ N VT++
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LI   C   NI+ AM L+ EM+     PD +V+  LI GLS+ G +     +  +M EA
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD---KTDG-------------GYCSPN 472
             +P + + + LI+G  +  ++  A     E  +   K DG             G  S  
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 473 H---------------VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT-YTTMLR 516
           H               V Y A+I A C +G + +A K+F DM S +  P N   Y  ++ 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            L R  ++   + L+ DM   G+ P+      M +G QE   L  AF   + + E
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 4/332 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  + +   IE A  ++ ++    V P +   N L++G+ K G+ +   EF+
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GL  + VTY  LI   C   ++ KA+ LFDEM++ G  P  ++Y  LI GL   
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  A  +   M+E G  P++ ++N L++G+C+   ++ A E   EM +  ++P+ VT+
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+    K G+   A      M K G+ P +  Y  LI  +C  GNL EAM +  +M  
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654

Query: 288 F-EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             ++ P+   YNILI  LC   Q++ A  L+  M  +G+  N  T+N++  G  ++  + 
Sbjct: 655 TSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLS 714

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KA  +  +MTE    P+ +T   L +     G
Sbjct: 715 KAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 184/393 (46%), Gaps = 12/393 (3%)

Query: 38  VFNALNSLEIPKF--NPSV--FSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNA 89
           VF  +N  E   F   P V  ++TLI    ++G  EE L +  ++      +P     N 
Sbjct: 362 VFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++G  K    ++  E +++M   G+  +VVT   L+D  C  G +  A+  F+EM  KG
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++   V YT LI   CN N + +A  +F  M E G  P+   Y  L+ G  +   ++RA 
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               +M      P++V+F VL++G C+  +L  A      M   G+ P+   YN LI   
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILAN 328
            K G+   A  L  +M K  + P V TY  LI   C  G L+ A  + + M     +  N
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPN 661

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            V YN LI+  C++  ++ ALS+   M  KGV+PN  TF+++  G  +   +  A  L  
Sbjct: 662 TVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            M   +  PD +    L + LS  G   ET +L
Sbjct: 722 RMTEHACNPDYITMEILTEWLSAVG---ETAKL 751



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 219/497 (44%), Gaps = 52/497 (10%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID    +G V  AL+L DEM+    E                                
Sbjct: 197 ILIDVLFRKGRVDDALHLLDEMLQPKAE-------------------------------- 224

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALE------FYHEMLHHNLQPNVVTFGVLMDGLCKV 237
              PN  T + +     K   V RA++         +   H + PN +    L+  LC+ 
Sbjct: 225 -FPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRS 283

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G    A +    + K G        N L+    +A       +L +EM++ +I P+V T+
Sbjct: 284 GRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTF 343

Query: 298 NILIKGLCGVGQLEGAEGLLQKM---YKEGIL--ANVVTYNSLIDGYCKEGDMEKALSVC 352
            ILI  LC   +++ A  + +KM      G L   +V+TYN+LIDG CK G  E+ L + 
Sbjct: 344 GILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLV 403

Query: 353 SQM-TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            +M ++    PN VT++ LIDG CKA  I+AA  L+ +M    + P+VV    L+DG+ K
Sbjct: 404 ERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCK 463

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +   +  + EM    +  +  T ++LI        I  A+  F    D+     CSP
Sbjct: 464 HGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF----DEMLEAGCSP 519

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + ++Y  +I  L   G++ +AS + S M+     PD  ++  ++ G  R  ++ +   +L
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLKESRIGSSETEGHTTRSFL-- 588
            +M   GI PD V    ++  + + GD  +A R   + +KE  + +  T G    ++   
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639

Query: 589 GHLKPTVYKEQDLSICS 605
           G+L   +   +D+S  S
Sbjct: 640 GNLDEAMKIFRDMSSTS 656



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 8/276 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA-----LLNGLIKKGKFDSV 103
           K N   ++ LI AF  + +IE+A+ ++   E+L A  + +A     L++GL + GK D  
Sbjct: 483 KGNAVTYTALIRAFCNVNNIEKAMELFD--EMLEAGCSPDAIVYYTLISGLSQAGKLDRA 540

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
                +M   G   D+V++ VLI+  C +  + +A  +  EM + GI+P  V Y  LI  
Sbjct: 541 SFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISH 600

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQP 222
                    A  + + M + G+VP + TY AL+  YC   +++ A++ + +M     + P
Sbjct: 601 FSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPP 660

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N V + +L++ LC+  ++  A +    M   GV PN   +N +  G  +   L +A  L 
Sbjct: 661 NTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELM 720

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
             M +   +PD  T  IL + L  VG+    +  +Q
Sbjct: 721 DRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 6/211 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           L+ ++   F+P +  F+ LI  F     ++EA  + +++E   + P     N L++   K
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVV 155
            G F +     ++MV  GLV  VVTYG LI   C  G++ +A+ +F +M     + P  V
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           IY ILI+ LC +N++  A S+   M+  GV PN  T+NA+  G  +   +++A E    M
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
             H   P+ +T  +L + L  VGE     +F
Sbjct: 724 TEHACNPDYITMEILTEWLSAVGETAKLKSF 754


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 251/493 (50%), Gaps = 8/493 (1%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P  + T++      GH  +A  ++ ++   +V P +   N +L+ L +KG          
Sbjct: 80  PLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLA 139

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +++  G+  +  T  + I   C  G + +A+ L + M D  I P VV Y  L+ GLC ++
Sbjct: 140 KVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDS 198

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+ EA    R M   G +P+ +TYN ++DGYCK   +  A E   + +     P+ VT+ 
Sbjct: 199 KVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYC 258

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L++GLC  G++  A   F       + P++ VYN L+ G C+ G +  A+ + +EM + 
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED 318

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD++TYNI+I GLC +G +  A  ++     +G L +V T+N++IDGYCK   ++ A
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +  +M   G+ P+ +T++S+++G CKAG        + EM++K   P+ + +  LI+ 
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K   ++E   +   M +  + P   + ++LIHG  +NG +  A   F +  +K   GY
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK---GY 495

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            S     +  +I A      +  A K+F +M S   +PD  TY  ++ G  +A  +    
Sbjct: 496 -SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY 554

Query: 529 MLLADMIKMGIVP 541
           + LA+M+  G VP
Sbjct: 555 VHLAEMVSKGFVP 567



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 213/403 (52%), Gaps = 3/403 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+    +   ++EA    R++     +P     N +++G  K+       E  ++ +
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G V D VTY  LI+  C +GDV +AL LF+E   K ++P +V+Y  L+ GLC +  ++
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +   M E G  P+++TYN +++G CK+ +++ A    ++ +     P+V TF  ++
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG CK  +L +A      M  +G+ P+   YN +++G CKAG   E      EM      
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  TYNILI+  C + QLE A G++ +M ++G++ + +++N+LI G+C+ GD++ A  +
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLL 486

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             ++ EKG      TF+ LI       N+  A  ++ EM+ K   PD+  +  L+DG  K
Sbjct: 487 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCK 546

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             N+        EM+     PS+ T   +++ L  N R+S A+
Sbjct: 547 AANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAV 589



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 247/521 (47%), Gaps = 67/521 (12%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           PA  A NA+++ L+     D   + Y  M+  G+  D  T+ V I   C  G    AL L
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              + ++G +   + Y                         C VV  LY +    D    
Sbjct: 68  LRSLPERGCDVKPLAY-------------------------CTVVRGLYAHGHGYD---- 98

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A   + EML  ++ P+V TF  ++  LC+ G++  +G     + K G+  N F 
Sbjct: 99  ------ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFT 152

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N  I G C+ G L EA++L   M+ + I+PDV TYN L++GLC   +++ A   L++M 
Sbjct: 153 CNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMM 211

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G + +  TYN++IDGYCK   +++A  +      KG  P+ VT+ SLI+G C  G+++
Sbjct: 212 NQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVE 271

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ E   K L PD+VV+ +L+ GL + G +   L++  EM+E    P ++T + +I
Sbjct: 272 RALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVI 331

Query: 442 HGLFKNGRISNA---LNFFLEKTDKTD--------GGYC--------------------S 470
           +GL K G IS+A   +N  + K    D         GYC                    +
Sbjct: 332 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA 391

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + Y +++  LC  G+  + ++ F +M     RP+  TY  ++    +  ++ +   +
Sbjct: 392 PDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 451

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +  M + G+VPD +    ++ G+  NGDL  A+   + L E
Sbjct: 452 IVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDE 492



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 236/502 (47%), Gaps = 44/502 (8%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDS 102
           + + KF  +++   I    E G +EEA+ +   ++  + P +   N L+ GL K  K   
Sbjct: 146 MSVNKFTCNIW---IRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQE 202

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             ++   M+  G + D  TY  +ID  C +  + +A  L  + I KG  P  V Y  LI+
Sbjct: 203 AAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLIN 262

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC E  +  A  +F   +   + P+L  YN+L+ G C+   +  AL+  +EM+     P
Sbjct: 263 GLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHP 322

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           ++ T+ ++++GLCK+G +  A          G  P++F +N +IDG+CK   L  A+ L 
Sbjct: 323 DIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLV 382

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M  + I+PD  TYN ++ GLC  G+ +      ++M  +G   N +TYN LI+ +CK 
Sbjct: 383 ERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKI 442

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +E+A  V  +M++ G+ P+ ++F++LI G C+ G++D A  L+ ++  K        F
Sbjct: 443 NQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTF 502

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             LI   S   NM+   +++ EM+     P ++T   L+ G                   
Sbjct: 503 NILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG------------------- 543

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                                C    + +A    ++M S    P   T+  +L  L    
Sbjct: 544 --------------------SCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNH 583

Query: 523 RMLDVMMLLADMIKMGIVPDAV 544
           R+ + + ++  M++MG+VP+ V
Sbjct: 584 RVSEAVAIIHIMVRMGVVPEVV 605



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 193/375 (51%), Gaps = 12/375 (3%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           +L+NGL  +G  +   E + E     L  D+V Y  L+   C QG ++ AL + +EM++ 
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED 318

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P +  Y I+I+GLC    + +A  +       G +P+++T+N ++DGYCK   ++ A
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+    M  + + P+ +T+  +++GLCK G+ +     F  M   G  PN   YN LI+ 
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK   L EA  +   M +  + PD  ++N LI G C  G L+GA  L QK+ ++G  A 
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
             T+N LI  Y  + +M+ A  +  +M  KG +P++ T+  L+DG CKA N+D A     
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF-TVSS-------- 439
           EMV K  VP +  F  +++ L+ +  + E + +   M+   + P V  T+ S        
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAA 618

Query: 440 ---LIHGLFKNGRIS 451
              L+  L K G IS
Sbjct: 619 PKILVEELMKKGHIS 633



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 5/412 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P    Y  ++  L N     +A  ++  M   GV P+  T+   +  +C     + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L     +         + +  ++ GL   G    A + F  M +  VFP++  +N ++  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C+ G++ E+ +L +++ K  +S + FT NI I+GLC  G+LE A  L++ M    I  +
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPD 183

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVTYN+L+ G CK+  +++A     +M  +G  P+  T++++IDG CK   +  A  L  
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           + + K  VPD V + +LI+GL  +G+++  L L+ E     + P +   +SL+ GL + G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            I +AL    E  +  DG  C P+   Y  +I  LC  G I  A+ + +D       PD 
Sbjct: 304 LILHALQVMNEMVE--DG--CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            T+ TM+ G  +  ++   + L+  M   GI PDA+    ++ G  + G  K
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 266/557 (47%), Gaps = 45/557 (8%)

Query: 37  SVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNAL 90
           +V + L S+ +    P+      L+ A+++ G + +A  +  ++      LP +  CN L
Sbjct: 116 AVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRL 175

Query: 91  LNGLIKKGKFDSVWEFYEEMV-----------------LC------------------GL 115
           L  L+++ ++D   + Y+EM+                 LC                  G 
Sbjct: 176 LKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGC 235

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           +  VV Y VLID  C +GD+ + L L  EM  KG  PT+V Y  LI+ L  +  + +  S
Sbjct: 236 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGS 295

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  MR+ G+ PN+  YN+++D  CK     +A+    +M      P+++TF  L+ GLC
Sbjct: 296 LFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 355

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G +R A +F     +  + PN   Y  LI G C  G L  A  L  EM     +PDV 
Sbjct: 356 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 415

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           T+  LI GL   G++  A  + +KM +  +  +V  YN LI G CK+  +  A ++  +M
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 475

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EK V+P+   +++LIDG  ++ N+  A  ++  M  K + PD+V   A+I G  + G M
Sbjct: 476 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMM 535

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E +     M +    P  FT +++I G  K G ++ AL +  +   +     C PN V 
Sbjct: 536 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK----CKPNVVT 591

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y+++I   C  G    A  LF++M+++ L P+  TYT ++  L +  ++L   +    M+
Sbjct: 592 YSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 651

Query: 536 KMGIVPDAVINQVMVRG 552
                P+ V    +V G
Sbjct: 652 LNHCSPNDVTLHYLVNG 668



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 232/459 (50%), Gaps = 13/459 (2%)

Query: 66  GHIEEALWVYRKIEV------LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           G +EE L   + IE       +P +   N L++G  ++G          EM   G +  +
Sbjct: 218 GRVEEGL---KLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           VTYG LI+C   +GD+ K  +LF EM  +G+ P V IY  +I  LC      +A  + + 
Sbjct: 275 VTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQ 334

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  P++ T+N L+ G C    V +A  F  E +   L PN +++  L+ G C  GE
Sbjct: 335 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L AA +  + M   G  P++  +  LI G   AG + EA+ +  +M + ++ PDV  YN+
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI GLC    L  A+ +L++M ++ +  +   Y +LIDG+ +  ++  A  +   M  KG
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           V P++V+ +++I G C+ G +  A+   + M     +PD   +T +I G +K GN+   L
Sbjct: 515 VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           R   +M++ K  P+V T SSLI+G  K G   +A   F     +      SPN V Y  +
Sbjct: 575 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA----LSPNVVTYTIL 630

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           I +L    ++L+A   F  M  ++  P++ T   ++ GL
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 5/466 (1%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYT 158
           FD+V +  + M L G        G L+      G + KA ++ + + ++ G  P V    
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            L+  L  + +  +A  ++  M       + Y+   L+ G C    V   L+        
Sbjct: 174 RLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGA 233

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              P+VV + VL+DG C+ G++         M   G  P +  Y  LI+   K G+L + 
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKI 293

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            SL  EM K  +SP+V  YN +I  LC       A  +L++M+  G   +++T+N+LI G
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITG 353

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C EG + KA     +   + + PN ++++ LI G C  G + AA  L  EM+ +   PD
Sbjct: 354 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPD 413

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV F ALI GL   G + E L + ++M E ++ P V   + LI GL K   +  A N   
Sbjct: 414 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E  +K       P+  +YA +I        +  A K+F  M    +RPD  +   M++G 
Sbjct: 474 EMLEKN----VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGY 529

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +   M + ++ +++M K+G +PD      ++ GY + G+L  A R
Sbjct: 530 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 575



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 204/445 (45%), Gaps = 7/445 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNR 207
           G  PT      L+    +   + +A  M   +RE  G +P +   N L+    +    + 
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A + Y EML  +   +  +  VL+ GLC  G +             G  P++  YN LID
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+C+ G++   + L  EME     P + TY  LI  L   G LE    L  +M K G+  
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV  YNS+ID  CK     +A+ +  QM   G +P+++TF++LI G C  G++  A    
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E + + L P+ + +T LI G    G +     L  EM+    TP V T  +LIHGL   
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G++S AL    + T++       P+  +Y  +I  LC    +  A  +  +M   N++PD
Sbjct: 428 GKVSEALIVREKMTERQ----VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPD 483

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
              Y T++ G +R++ + D   +   M   G+ PD V    M++GY + G +  A  C  
Sbjct: 484 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMS 543

Query: 568 FLKESRIGSSETEGHTTRSFLGHLK 592
            ++  ++G    E   T    G+ K
Sbjct: 544 NMR--KVGCIPDEFTYTTVISGYAK 566



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 224/491 (45%), Gaps = 37/491 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++++I A  +     +A+ + +++      P I   N L+ GL  +G       F 
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E +   L  + ++Y  LI   C +G++M A +L  EM+ +G  P VV +  LIHGL   
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA  +   M E  V P++  YN L+ G CK   +  A     EML  N+QP+   +
Sbjct: 428 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVY 487

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DG  +   L  A   F  M   GV P+I   N +I G+C+ G + EA+   S M K
Sbjct: 488 ATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 547

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PD FTY  +I G    G L GA   L  M K     NVVTY+SLI+GYCK GD + 
Sbjct: 548 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDS 607

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE-MVIKSLVPDVVVFTALI 406
           A  + + M  + + PNVVT++ LI    K   +  A GLY E M++    P+ V    L+
Sbjct: 608 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA-GLYFETMLLNHCSPNDVTLHYLV 666

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTV----SSLIHGLFKNGRISNALNFFLEKTD 462
           +GL+                    TP V       +S +HG        +AL    +K  
Sbjct: 667 NGLT------------------SCTPCVINSICCNTSEVHG-------KDALLVVFKKLV 701

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
              G    P +  Y AII +LC    + +A    + M      P+  T+ ++L G     
Sbjct: 702 FDIG---DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758

Query: 523 RMLDVMMLLAD 533
           + ++   +L +
Sbjct: 759 KSMNWRTILPN 769



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 139/323 (43%), Gaps = 27/323 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TLI  F    ++ +A  ++  +E   V P I +CNA++ G  + G           M
Sbjct: 486 VYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNM 545

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G + D  TY  +I     QG++  AL    +MI +  +P VV Y+ LI+G C     
Sbjct: 546 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 605

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE +F +M+   + PN+ TY  L+    K   V RA  ++  ML ++  PN VT   L
Sbjct: 606 DSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 665

Query: 231 MDGL------------CKVGELRAAGNFFVHMAKFGVF----PNIFVYNCLIDGHCKAGN 274
           ++GL            C   E+       V   K  VF    P    YN +I   C+   
Sbjct: 666 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKL-VFDIGDPRNSAYNAIIFSLCRHNM 724

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EA+   + M K    P+  T+  L+ G C VG+      +L   +++     +  Y  
Sbjct: 725 LREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIFRYKF 784

Query: 335 LIDGYCKEGDMEKALSVCSQMTE 357
           L D Y  E       SVC +++ 
Sbjct: 785 LFDQYATE-------SVCCEVSR 800


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 266/551 (48%), Gaps = 46/551 (8%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK-------KGKFD 101
           P V++T+I  F E+   E+AL  Y   +K+ V   +Q CN LL GL++       +  FD
Sbjct: 143 PQVYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKGLVEGNQIMYVRSLFD 200

Query: 102 SV------------------------------WEFYEEMVLCGLVADVVTYGVLIDCCCG 131
            +                               E   EM + G+  +  TYG  +   C 
Sbjct: 201 DMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCR 260

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
              V  A N    +  +G       +  +IHG C++ ++ +A  +F  M++CG VP++++
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHS 320

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y+ L+DG CK  DV        EM  + + PN+V++  L+ GLC+ G +  A   F  + 
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G   +  VY+ ++ G C+  +L     L ++M      PD + Y+ LI   C   QL+
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  + + M  +GI  NVVT   L+ G+  EG + +A     ++ + GV PN+ T+  +I
Sbjct: 441 EALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVII 500

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G CK    +   G++ +M+ +  VPD V+++ +IDG  K  +++E  RLY +M++    
Sbjct: 501 NGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTK 560

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++FT +SLI+GL  + ++   +  F        G   +P+ +LY ++I   C    +  
Sbjct: 561 PNIFTYTSLINGLCHDDKLPEVMTLFKHMI----GEGLTPDRILYTSLIACYCKRSNMKA 616

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A ++F +M ++ L  D+  YT ++ G  +   M    + + +M+  G+ P  V    ++ 
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLII 676

Query: 552 GYQENGDLKSA 562
           GY + GD K A
Sbjct: 677 GYFKIGDEKKA 687



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 246/523 (47%), Gaps = 48/523 (9%)

Query: 42  LNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC-NALLNGLI 95
           L+ +E+    P  + + T +        ++ A W + ++      P    C NA+++G  
Sbjct: 236 LSEMEVEGVRPNAATYGTYLYGLCRAKQVKSA-WNFLQMLCQRGYPCNSYCFNAVIHGFC 294

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
             G+     E ++ M  CG V DV +Y +L+D  C QGDV+    +  EM   GI P +V
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y+ L+HGLC   ++  A  +F+ +++ G   +   Y+ ++ G C+  D+    + +++M
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +HHN  P+   +  L+   C+  +L+ A   F  M   G+ PN+     L+ G    G +
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA     ++ +F + P++ TY ++I GLC V +     G+   M K G + + V Y+ +
Sbjct: 475 GEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDG+ K  D+++A  +  +M ++G +PN+ T++SLI+G C    +   M L+  M+ + L
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD +++T+LI    K  NMK  L +++EM    ++   F  + LI G  K         
Sbjct: 595 TPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSK--------- 645

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                                      L  DG    A     +M +  L P   TYT ++
Sbjct: 646 --------------------------VLAMDG----AQLFMEEMMNKGLTPTVVTYTDLI 675

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            G  +       M++   M++ GI PDA ++ ++  G   +GD
Sbjct: 676 IGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL--GLGNDGD 716



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 197/428 (46%), Gaps = 41/428 (9%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  + E    G+E  V     L+ GL   N+++   S+F  M+  G  PN+Y+Y+ LM 
Sbjct: 162 ALVTYVEAKKVGVELQVC--NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMS 219

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            Y   A                              LC    L  A      M   GV P
Sbjct: 220 MYTHGAK-----------------------------LC----LEEAQELLSEMEVEGVRP 246

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   Y   + G C+A  +  A +    + +     + + +N +I G C  GQ+  A  + 
Sbjct: 247 NAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVF 306

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K G + +V +Y+ L+DG CK+GD+     +  +M   G+ PN+V++SSL+ G C+A
Sbjct: 307 DGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRA 366

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G ++ A  L+  +  +    D +V++ ++ G  +  +++    L+ +M+     P  +  
Sbjct: 367 GRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNY 426

Query: 438 SSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           SSLI+   ++ ++  AL  F L   D    G C PN V    ++     +G I +A    
Sbjct: 427 SSLIYAYCRHRQLKEALEVFELMICD----GIC-PNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             +R   + P+ CTY  ++ GL +  +  DV  + ADMIK G VPD V+  +++ G+ + 
Sbjct: 482 DKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541

Query: 557 GDLKSAFR 564
            DL+ AFR
Sbjct: 542 LDLQEAFR 549



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 7/298 (2%)

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           ++FE  +L + +E  ++  ++   N L+KGL    Q+     L   M   G   N+ +Y+
Sbjct: 157 SMFED-ALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYS 215

Query: 334 SLIDGYCKEGDM--EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            L+  Y     +  E+A  + S+M  +GV PN  T+ + + G C+A  + +A      + 
Sbjct: 216 VLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLC 275

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +    +   F A+I G   DG + + + ++  M +    P V + S L+ GL K G + 
Sbjct: 276 QRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVL 335

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
                 +E          +PN V Y++++  LC  G++  A +LF  ++    + D+  Y
Sbjct: 336 TGYYMLVEMARNG----ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           + +L G  +   +     L  DM+    VPDA     ++  Y  +  LK A    E +
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 8/244 (3%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y ++I  + +    E AL    +  + GVE  V  F  L+ G  +   I     L+ +M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKGLVEGNQIMYVRSLFDDM 202

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNM--KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            I    P++  ++ L+   +    +  +E   L  EM    + P+  T  + ++GL +  
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           ++ +A NF      +   GY   N   + A+I   C+DGQ+ KA ++F  M+     PD 
Sbjct: 263 QVKSAWNFLQMLCQR---GY-PCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDV 318

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            +Y+ ++ GL +   +L    +L +M + GI P+ V    ++ G    G ++ AF   + 
Sbjct: 319 HSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKR 378

Query: 569 LKES 572
           LK+ 
Sbjct: 379 LKDQ 382


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 260/525 (49%), Gaps = 8/525 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    + G ++ A  +  K+ V    P ++   AL+NGLIK   FD V    
Sbjct: 254 NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHIL 313

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  G   +VV +  LID  C  G++  AL + D MI K I PT V    L+ G C  
Sbjct: 314 DEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKS 373

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++  AE+    +   G+  +     +++   CK    + A  F   ML  N +P+ +  
Sbjct: 374 DQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 433

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+ GLCK G+   A   +  + + G   +    N LI G C AG L EA  +  EM +
Sbjct: 434 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 493

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D  TYN LI G C  G++EG   L ++M K GI  ++ TYN L+ G C  G ++ 
Sbjct: 494 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDD 553

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  +    G+  N+ T+  +++G CKA  I+    L+ E++ K +  + +V+  +I 
Sbjct: 554 AIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIK 613

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              ++GN+   L+L + M    I P+  T SSLIHG+   G + +A +   E   +   G
Sbjct: 614 AHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE---G 670

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +  PN V Y A+I   C  GQ+  A   + +M S N+ P+  TYT M+ G  +   M   
Sbjct: 671 FV-PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
             LL  M + GIVPD V   V+  G+ +  D+ +AF+ C +   E
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 774



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 193/369 (52%), Gaps = 5/369 (1%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +R  ++L  +  C     GL K GK     E +  ++  G  A  VT   LI   CG G 
Sbjct: 426 FRPSDLLLTMLVC-----GLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A  +  EM+++G+    + Y  LI G CNE K+     +   M + G+ P++YTYN 
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G C V  ++ A++ + E     L  N+ T+G++M+G CK   +    N F  +    
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  N  VYN +I  HC+ GN+  A+ L   M+   I P+  TY+ LI G+C +G +E A+
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+ +M KEG + NVV Y +LI GYCK G M+ A S   +M    + PN  T++ +IDG 
Sbjct: 661 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGY 720

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK GN++ A  L  +M    +VPDVV +  L +G  K  +M    ++  +M    +    
Sbjct: 721 CKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 780

Query: 435 FTVSSLIHG 443
            T ++L+HG
Sbjct: 781 ITYTTLVHG 789



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 256/528 (48%), Gaps = 9/528 (1%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS   +I A  + G +E A+ ++ K+E L   P +   N ++NGL + G+ D+ +E 
Sbjct: 218 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 277

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E+M + G+  ++ TYG LI+         K  ++ DEMI  G  P VV++  LI G C 
Sbjct: 278 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCK 337

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A  +   M    + P   T  +LM G+CK   +  A     E+L   L  +   
Sbjct: 338 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 397

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              ++  LCK     +A  F   M      P+  +   L+ G CK G   EA  L   + 
Sbjct: 398 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 457

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +        T N LI GLCG G+L  A  ++++M + G+  + +TYN+LI G+C EG +E
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 517

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               +  +MT++G++P++ T++ L+ G C  G +D A+ L+ E     L+ ++  +  ++
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 577

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +G  K   +++   L+ E+L  K+  +    + +I    +NG ++ AL   L +  K+ G
Sbjct: 578 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ--LLENMKSKG 635

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y+++I  +C  G +  A  L  +MR +   P+   YT ++ G  +  +M  
Sbjct: 636 --ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 693

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                 +MI   I P+     VM+ GY + G+++ A      +KES I
Sbjct: 694 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 201/389 (51%), Gaps = 10/389 (2%)

Query: 32  HHVC-----YSVFNALNSLEIPKFNPS--VFSTLIIAFSEMG-HIEEALWVYRKIEV-LP 82
           H +C     +S F     +    F PS  + + L+    + G H+E     +R +E   P
Sbjct: 403 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 462

Query: 83  AIQ-ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           A +   NAL++GL   GK        +EM+  GL  D +TY  LI   C +G V     L
Sbjct: 463 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 522

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +EM  +GI+P +  Y  L+ GLCN  K+ +A  ++   +  G++ N++TY  +M+GYCK
Sbjct: 523 REEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCK 582

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +      ++E+L   ++ N + + +++   C+ G + AA     +M   G+ PN   
Sbjct: 583 ANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 642

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C  G + +A  L  EM K    P+V  Y  LI G C +GQ++ AE    +M 
Sbjct: 643 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 702

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
              I  N  TY  +IDGYCK G+MEKA ++  +M E G+ P+VVT++ L +G CKA ++D
Sbjct: 703 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 762

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            A  +  +M  + L  D + +T L+ G +
Sbjct: 763 NAFKVCDQMATEGLPVDEITYTTLVHGWN 791



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 247/559 (44%), Gaps = 102/559 (18%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
           +  ++  +    P+++ CN  L+ L+K  +F+                           C
Sbjct: 172 DVFYLLARKGTFPSLKTCNFXLSSLVKANEFEK--------------------------C 205

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    VM           +G  P V  +T +I+ LC   KM  A  +F  M + G+ PN+
Sbjct: 206 CEVFRVM----------SEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNV 255

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TYN +++G C+   ++ A E   +M    +QPN+ T+G L++GL K+       +    
Sbjct: 256 VTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDE 315

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G  PN+ V+N LIDG+CK GN+  A+ +   M    I+P   T   L++G C   Q
Sbjct: 316 MIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQ 375

Query: 310 LEGAEGLLQKMYKEGI-------------LANVVTYNS---------------------- 334
           +E AE  L+++   G+             L     Y+S                      
Sbjct: 376 IEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTM 435

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+ G CK+G   +A  +  ++ EKG   + VT ++LI G C AG +  A  +  EM+ + 
Sbjct: 436 LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 495

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L  D + + ALI G   +G ++   RL +EM +  I P ++T + L+ GL   G++ +A+
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555

Query: 455 NFFLE-------KTDKTDG----GYCSPNH--------------------VLYAAIIQAL 483
             + E           T G    GYC  N                     ++Y  II+A 
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G +  A +L  +M+S  + P+  TY++++ G+     + D   L+ +M K G VP+ 
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675

Query: 544 VINQVMVRGYQENGDLKSA 562
           V    ++ GY + G + +A
Sbjct: 676 VCYTALIGGYCKLGQMDTA 694



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 191/408 (46%), Gaps = 11/408 (2%)

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F  +   G  P+L T N  +    K  +  +  E +  M      P+V +F  +++
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 228

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LCK G++  A   F+ M K G+ PN+  YNC+I+G C+ G L  A  L  +M    + P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           ++ TY  LI GL  +   +    +L +M   G   NVV +N+LIDGYCK G++E AL + 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK--SLVPDVVVFTALIDGLS 410
             M  K + P  VT  SL+ G CK+  I+ A     E++    S+ PD     +++  L 
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWLC 406

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K        R  K ML     PS   ++ L+ GL K+G+   A   +    +K      S
Sbjct: 407 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG-----S 461

Query: 471 P-NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P + V   A+I  LC  G++ +AS++  +M    L  D  TY  ++ G     ++     
Sbjct: 462 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 521

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           L  +M K GI PD      ++RG    G L  A +  +  K S + S+
Sbjct: 522 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 264/540 (48%), Gaps = 42/540 (7%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   F TLI  F + G ++ A  +++ +E   + P + A + L++G  K G      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + + +  G+  DVV +   ID     GD+  A  ++  M+ +GI P VV YTILI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + ++ EA  M+  + + G+ P++ TY++L+DG+CK  ++      Y +M+     P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +GVL+DGL K G +  A  F V M    +  N+ V+N LIDG C+     EA+ +   
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--- 341
           M  + I PDV T+  +++     G+LE A  L  +M+K G+  + + Y +LID +CK   
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581

Query: 342 ------------EGDMEKALSVC--------------------SQMTEKGVEPNVVTFSS 369
                          +   ++VC                    + + E  +EP++VT+++
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G C    +D A  ++  + +    P+ V  T LI  L K+ +M   +R++  M E  
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  T   L+    K+  I  +   F E  +K      SP+ V Y+ II  LC  G++
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG----ISPSIVSYSIIIDGLCKRGRV 757

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A+ +F       L PD   Y  ++RG  +  R+++  +L   M++ G+ PD ++ + +
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 250/497 (50%), Gaps = 9/497 (1%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            I +CN +L GL    + +        ++ CG   +VVT+  LI+  C +G++ +A +LF
Sbjct: 251 GIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  +GIEP ++ Y+ LI G      +     +F      GV  ++  +++ +D Y K 
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            D+  A   Y  ML   + PNVVT+ +L+ GLC+ G +  A   +  + K G+ P+I  Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + LIDG CK GNL    +L  +M K    PDV  Y +L+ GL   G +  A     KM  
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           + I  NVV +NSLIDG+C+    ++AL V   M   G++P+V TF++++      G ++ 
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET--LRLYKEMLEAKITPSVFTVSSL 440
           A+ L+  M    L PD + +  LID   K  +MK T  L+L+  M   KI+  +   + +
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH LFK  RI +A  FF    +    G   P+ V Y  +I   C   ++ +A ++F  ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIE----GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                P+  T T ++  L +   M   + + + M + G  P+AV    ++  + ++ D++
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723

Query: 561 SAFRCSEFLKESRIGSS 577
            +F+  E ++E  I  S
Sbjct: 724 GSFKLFEEMQEKGISPS 740



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 163/623 (26%), Positives = 271/623 (43%), Gaps = 91/623 (14%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKG 98
           FN L+S  +   N     T ++  S       AL  +R  E+     +   + + LI+ G
Sbjct: 55  FNLLDS-SVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNG 113

Query: 99  KFDSVWEFYEEMVLC--------------GLVADVVTYGVLIDCCCGQGDVMKALNL--- 141
            FD   + ++EM+                 L ADV  +  L++CCC  G V KAL +   
Sbjct: 114 MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVY 171

Query: 142 --------------------------------FDEMIDKGIEPT---------------- 153
                                           FD++   GIEP+                
Sbjct: 172 STQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG 231

Query: 154 VVIYTILIHGLCNE----------NKMVE---------AESMFRSMRECGVVPNLYTYNA 194
            V   +  H L  E          NK+++         A  +   + +CG  PN+ T+  
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++G+CK  +++RA + +  M    ++P+++ +  L+DG  K G L      F      G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V  ++ V++  ID + K+G+L  A  +   M    ISP+V TY ILIKGLC  G++  A 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           G+  ++ K G+  ++VTY+SLIDG+CK G++    ++   M + G  P+VV +  L+DG 
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K G +  AM    +M+ +S+  +VVVF +LIDG  +     E L++++ M    I P V
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++++      GR+  AL  F             P+ + Y  +I A C   +     +
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMG----LEPDALAYCTLIDAFCKHMKPTIGLQ 587

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M+ + +  D      ++  L +  R+ D      ++I+  + PD V    M+ GY 
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647

Query: 555 ENGDLKSAFRCSEFLKESRIGSS 577
               L  A R  E LK +  G +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPN 670


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 247/491 (50%), Gaps = 11/491 (2%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E+ H + ++W  +     P +   N L+  L +  +        E+M   GLV D  T+ 
Sbjct: 174 EIAHAKMSVWGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RE 182
            ++     +GD+  AL + ++M++ G   + V   +++HG C E ++ +A +  + M  +
Sbjct: 229 TIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G  P+ YT+N L++G CK   V  A+E    ML     P+V T+  ++ GLCK+GE++ 
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A  F   M      PN   YN LI   CK   + EA  L   +    I PDV T+N LI+
Sbjct: 349 AVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC       A  L ++M  +G   +  TYN LID  C +G +++AL++  QM   G   
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V+T+++LIDG CKA  I  A  ++ EM +  +  + V +  LIDGL K   +++  +L 
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLM 528

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M+     P  FT +SL+    + G I  A +     T  ++G  C P+ V Y  +I  
Sbjct: 529 DQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT--SNG--CEPDIVTYGTLISG 584

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-IVP 541
           LC  G++  ASKL   ++   +      Y  +++GL R ++  + + L  +M++     P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644

Query: 542 DAVINQVMVRG 552
           DAV  +++ RG
Sbjct: 645 DAVSYRIVFRG 655



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 16/486 (3%)

Query: 58  LIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           ++  F + G +E+AL   +++       P     N L+NGL K G      E  + M+  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV TY  +I   C  G+V +A+   D+MI +   P  V Y  LI  LC EN++ EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R +   G++P++ T+N+L+ G C   +   A+E + EM     +P+  T+ +L+D 
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC  G+L  A N    M   G   ++  YN LIDG CKA  + EA  +  EME   +S +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             TYN LI GLC   ++E A  L+ +M  EG   +  TYNSL+  +C+ GD++KA  +  
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            MT  G EP++VT+ +LI G CKAG ++ A  L   + +K +      +  +I GL +  
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKR 624

Query: 414 NMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
              E + L++EMLE  +  P   +   +  GL    G I  A++F +E  +K   G+   
Sbjct: 625 KTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK---GFVPE 681

Query: 472 NHVLY--AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
              LY  A  +  L  +  ++K   +   M+      +     +M++GLL+ ++  D + 
Sbjct: 682 FSSLYMLAEGLLTLSMEETLVKLVNMV--MQKARFSEEE---VSMVKGLLKIRKFQDALA 736

Query: 530 LLADMI 535
            L  ++
Sbjct: 737 TLGGVL 742



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 210/415 (50%), Gaps = 5/415 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI+P V  + +LI  LC  +++  A  M   M   G+VP+  T+  +M GY +  D++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLID 267
           L    +M+      + V+  V++ G CK G +  A NF   M+ + G FP+ + +N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG++  A+ +   M +    PDV+TYN +I GLC +G+++ A   L +M       
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VTYN+LI   CKE  +E+A  +   +T KG+ P+V TF+SLI G C   N   AM L+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  K   PD   +  LID L   G + E L + K+M  +    SV T ++LI G  K 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            +I  A   F    D+ +    S N V Y  +I  LC   ++  AS+L   M  +  +PD
Sbjct: 484 NKIREAEEIF----DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             TY ++L    R   +     ++  M   G  PD V    ++ G  + G ++ A
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 237/493 (48%), Gaps = 9/493 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEAL----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           S F  LI ++++    +E L    W+     + P     N +LN L+       V   + 
Sbjct: 119 SPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M + G+  DV T+ VLI   C    +  A+ + ++M   G+ P    +T ++ G   E 
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTF 227
            +  A  +   M E G   +  + N ++ G+CK   V  AL F  EM + +   P+  TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L++GLCK G ++ A      M + G  P+++ YN +I G CK G + EA+    +M  
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            + SP+  TYN LI  LC   Q+E A  L + +  +GIL +V T+NSLI G C   +   
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  +M  KG EP+  T++ LID  C  G +D A+ +  +M +      V+ +  LID
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   ++E   ++ EM    ++ +  T ++LI GL K+ R+ +A        D+    
Sbjct: 479 GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLM----DQMIME 534

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+   Y +++   C  G I KA+ +   M S+   PD  TY T++ GL +A R+   
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 528 MMLLADMIKMGIV 540
             LL  +   GI 
Sbjct: 595 SKLLRSIQMKGIA 607



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 229/471 (48%), Gaps = 6/471 (1%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEP 152
           L + G FD + +  E+M   G       + +LI+         + L +   MID  G++P
Sbjct: 93  LGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKP 152

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  +++ L + N +   E     M   G+ P++ T+N L+   C+   +  A+   
Sbjct: 153 DTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M  + L P+  TF  +M G  + G+L  A      M +FG   +    N ++ G CK 
Sbjct: 213 EDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272

Query: 273 GNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           G + +A++   EM   +   PD +T+N L+ GLC  G ++ A  ++  M +EG   +V T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNS+I G CK G++++A+    QM  +   PN VT+++LI   CK   ++ A  L   + 
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K ++PDV  F +LI GL    N +  + L++EM      P  FT + LI  L   G++ 
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            ALN    K  +  G  C+ + + Y  +I   C   +I +A ++F +M    +  ++ TY
Sbjct: 453 EALNML--KQMELSG--CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            T++ GL +++R+ D   L+  MI  G  PD      ++  +   GD+K A
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKA 559



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 204/441 (46%), Gaps = 7/441 (1%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           L+D    Q D   AL LF+    K    P   +Y  ++  L       +   +   M+  
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRA 242
           G       +  L++ Y +    +  L   H M+    L+P+   +  +++ L     L+ 
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
                  M+ +G+ P++  +N LI   C+A  L  A+ +  +M  + + PD  T+  +++
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVE 361
           G    G L+GA  + ++M + G   + V+ N ++ G+CKEG +E AL+   +M+ + G  
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+  TF++L++G CKAG++  A+ +   M+ +   PDV  + ++I GL K G +KE +  
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M+    +P+  T ++LI  L K  ++  A       T K       P+   + ++IQ
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG----ILPDVCTFNSLIQ 408

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC       A +LF +MRS    PD  TY  ++  L    ++ + + +L  M   G   
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468

Query: 542 DAVINQVMVRGYQENGDLKSA 562
             +    ++ G+ +   ++ A
Sbjct: 469 SVITYNTLIDGFCKANKIREA 489



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 18/220 (8%)

Query: 362 PNVVTFSS----LIDGQCKAGNIDAAMGLYTEMVIK-SLVPDVVVFTALIDGLSKDGNMK 416
           PN    SS    L+D      +  AA+ L+     K +  P+  ++  ++  L + G+  
Sbjct: 41  PNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD 100

Query: 417 ETLRLYKEM----LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           +  ++ ++M     E   +P +  + S      ++  I   +++ ++     D G   P+
Sbjct: 101 DMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD-EILGVVHWMID-----DFGL-KPD 153

Query: 473 HVLYAAIIQALCYDGQILKASKL-FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
              Y  ++  L  DG  LK  ++  + M    ++PD  T+  +++ L RA ++   +++L
Sbjct: 154 THFYNRMLN-LLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            DM   G+VPD      +++GY E GDL  A R  E + E
Sbjct: 213 EDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE 252


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 170/615 (27%), Positives = 296/615 (48%), Gaps = 50/615 (8%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +V A A L + A+ L+ D+     +        +S F  L+S E    + +V S LI 
Sbjct: 66  IVHVFALAGLQREAQYLLTDIVFYYKEENLNVSGLFSTF--LDSPECVGRSATVLSLLIK 123

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F+    + +A  V+   +KI V   I +CN LL  L +  K ++V   ++++   G   
Sbjct: 124 VFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSP 183

Query: 118 DVVTYGVLIDCCC----GQG-DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           +V TY ++I+  C    GQ  D+ +A  + +EM +KG  PTVV Y + IHGLC    + +
Sbjct: 184 NVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIED 243

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A +  + +R      N+Y YNAL+ G+C+    + AL+   EM    + P++ ++ +L++
Sbjct: 244 AWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVN 303

Query: 233 GLCKVGE-----------------------------LRAAG------NFFVHMAKFGVFP 257
             C  G+                             LR  G      NFF  ++  G   
Sbjct: 304 AFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKH 363

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y+ LI G  K  N+  A +L  EM K  + PD   Y  LI+  C  G L+ A    
Sbjct: 364 DLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNF 423

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M ++G+  +++T N ++D YC  G  E+AL   +QM ++ + PN  T+S +I+  CK 
Sbjct: 424 YTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKY 483

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD-GNMKETLRLYKEMLEAKITPSVFT 436
             ++ A  +   M   ++ P V+ +T ++DG +K   N  +  +LY++M +    P   T
Sbjct: 484 QAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVT 543

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           ++ L+    K G++S ALN F E  ++      S +   + AII   C  G + +A  ++
Sbjct: 544 LTVLVDMFSKRGKMSKALNLFKEMAEEG----LSRDEFAFTAIIDGYCRVGNVKRAWSMY 599

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M+ +N+ P+  TYT ++ G  + KR+    ML+ DM +  + PD      ++ GYQ  
Sbjct: 600 KKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRI 659

Query: 557 GDLKSAFRCSEFLKE 571
            ++  A+   + +K+
Sbjct: 660 ENIDRAYEVFDEMKK 674



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 241/482 (50%), Gaps = 16/482 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPA------IQACNALLNG 93
           L  +E    NP+V  +   I     +G IE+A   + KI+ L +      I   NAL+ G
Sbjct: 213 LEEMEEKGENPTVVTYGVYIHGLCRVGSIEDA---WNKIQDLRSSNQPLNIYCYNALIQG 269

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             +KG+ D   +  EEM   G+  D+ +Y +L++  C +GD+   +NL  EM     +P 
Sbjct: 270 FCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPP 329

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V  T ++ GL  +  + +  + F  +   G   +L +Y+ L+ G+ K  +V  A    H
Sbjct: 330 LVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVH 389

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM  + L P+ + +  L+   C+ G L+ A   F  M + G+ P+I   N ++D +C  G
Sbjct: 390 EMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRG 449

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
              EA+   ++M+   I P+ +TY+++I  LC    +E A  +L  M+K+ I  +V+ Y 
Sbjct: 450 QFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYT 509

Query: 334 SLIDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++DGY K+  +  KA  +  +M + G +P+ VT + L+D   K G +  A+ L+ EM  
Sbjct: 510 TIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAE 569

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + L  D   FTA+IDG  + GN+K    +YK+M    +TP+V T + L+ G  K  R+  
Sbjct: 570 EGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDM 629

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A        D       +P+   Y A+I        I +A ++F +M+     PD+  Y 
Sbjct: 630 ATMLI----DDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYL 685

Query: 513 TM 514
           T+
Sbjct: 686 TL 687



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 215/447 (48%), Gaps = 10/447 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A ++F +    G+E  +     L+  L   +K+    S+F  ++  G  PN+YTY  +++
Sbjct: 134 AKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMIN 193

Query: 198 GYCKVA-----DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            YCK       D+ +A     EM      P VVT+GV + GLC+VG +  A N    +  
Sbjct: 194 FYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRS 253

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
                NI+ YN LI G C+ G   EA+ L  EM+   ISPD+++Y+IL+   C  G +E 
Sbjct: 254 SNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIES 313

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              L+Q+M        +V   S++ G   +G +   L+   +++ KG + +++++S+LI 
Sbjct: 314 GMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIH 373

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  K  N+ +A  L  EM    LVPD +++ +LI    + G +KE L+ +  ML+  + P
Sbjct: 374 GFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQP 433

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            + T + ++      G+   AL +  +  D+       PN   Y+ II  LC    + KA
Sbjct: 434 DIITCNHIVDQYCSRGQFEEALIYINQMKDQN----ILPNSYTYSVIINWLCKYQAVEKA 489

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRA-KRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            ++   M  DN+ P    YTT++ G  +  K  +    L   M K+G  PD V   V+V 
Sbjct: 490 WEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVD 549

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSE 578
            + + G +  A    + + E  +   E
Sbjct: 550 MFSKRGKMSKALNLFKEMAEEGLSRDE 576



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 41/397 (10%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S L+ AF   G IE  + + +++E     P +  C ++L GL  KG  +    F+ E+ 
Sbjct: 298 YSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELS 357

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D+++Y  LI       +V  A NL  EM   G+ P  +IY  LI   C +  + 
Sbjct: 358 AKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLK 417

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA   F +M + G+ P++ T N ++D YC       AL + ++M   N+ PN  T+ V++
Sbjct: 418 EALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVII 477

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA------------------- 272
           + LCK   +  A      M K  +FP++  Y  ++DG+ K                    
Sbjct: 478 NWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGC 537

Query: 273 -----------------GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
                            G + +A++L  EM +  +S D F +  +I G C VG ++ A  
Sbjct: 538 KPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWS 597

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + +KM +  +  NV TY  L+DG+CK   ++ A  +   M    V P+V T+++LI G  
Sbjct: 598 MYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQ 657

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           +  NID A  ++ EM  K  +PD + +  L  GL  D
Sbjct: 658 RIENIDRAYEVFDEMKKKGTLPDHIAYLTL--GLGAD 692



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 160/340 (47%), Gaps = 9/340 (2%)

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A + F+   K GV  NI   N L+    +   L    SL  +++    SP+V+TY I
Sbjct: 131 LADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTI 190

Query: 300 LIKGLCGV--GQ---LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           +I   C    GQ   +E A  +L++M ++G    VVTY   I G C+ G +E A +    
Sbjct: 191 MINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQD 250

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +       N+  +++LI G C+ G  D A+ L  EM  + + PD+  ++ L++    +G+
Sbjct: 251 LRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGD 310

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           ++  + L +EM      P +   +S++ GL   G +++ LNFF E + K   GY   + +
Sbjct: 311 IESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAK---GY-KHDLI 366

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y+ +I        +  A+ L  +MR + L PD   Y +++R   R   + + +     M
Sbjct: 367 SYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTM 426

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++ G+ PD +    +V  Y   G  + A      +K+  I
Sbjct: 427 LQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNI 466


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 226/436 (51%), Gaps = 29/436 (6%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P +V Y  LI G C   ++ EA    + +R      +L ++NAL +G+CK   +   
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKEE 60

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +  Y  ++     PNV+T+G  +D LCKVG+L     FF  M K G+ PN+  + CLIDG
Sbjct: 61  VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           + K GNL  A  L  +M K    P+V+TY  LI G C  G LE AE    KM + GI+ N
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
              Y S+IDG+ K+G+++ A+   S+M ++    ++V +  +I G    G +D  + +  
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVME 240

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +MV   L PD VV T L+    K GN K    +Y+E+L     P   T+SSLI GL K+G
Sbjct: 241 DMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDG 300

Query: 449 RISNALNFFL-EKTDKTD-----GGYCS--------------------PNHVLYAAIIQA 482
           R  +A  +F  EK ++        G C                     P+  +Y + I  
Sbjct: 301 RYHDAKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAE 360

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G+I++A K+ + M  + +  D  TY++++ GL     M++   L  DM+K GI+PD
Sbjct: 361 LCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPD 420

Query: 543 AVINQVMVRGY--QEN 556
           +++  +++RGY  Q+N
Sbjct: 421 SMVFDILIRGYLKQDN 436



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 234/460 (50%), Gaps = 10/460 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP I   N+L++G  K G+ +      + +       D+V++  L +  C +  + + + 
Sbjct: 4   LPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKR-KMKEEVF 62

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           ++  ++ K   P V+ Y   I  LC    +      F+ MR+ G+VPNL  +  L+DGY 
Sbjct: 63  IYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYS 122

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K+ +++ A + Y +M      PNV T+  L++G CK G L  A  FF+ M + G+ PN  
Sbjct: 123 KIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNST 182

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           VY  +IDGH K GN+  AM   SEM K     D+  Y ++I GL   G+L+    +++ M
Sbjct: 183 VYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDM 242

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  + V   +L+  + K G+ + A  V  ++  +G EP+ VT SSLIDG CK G  
Sbjct: 243 VRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRY 302

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A G + +          V +TALIDG+ K+GN+ E  R+  EM E+   P  F  +S 
Sbjct: 303 HDAKGYFCKEKANE-----VSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSW 357

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I  L + G+I  A   F  K    + G    + + Y+++I  L   G +++A +LF DM 
Sbjct: 358 IAELCRQGKIVEA---FKVKNKMVEEG-IDLDLLTYSSLIFGLANKGLMIEAKQLFDDML 413

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
              + PD+  +  ++RG L+    + +  L  +M + G++
Sbjct: 414 KRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGLL 453



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 14/393 (3%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G +P++ TYN+L+DGYCK   V  A      + +   + ++V+F  L +G CK    +  
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK---RKMK 58

Query: 244 GNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
              F++M        PN+  Y   ID  CK G+L        EM K  I P++  +  LI
Sbjct: 59  EEVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLI 118

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G   +G L+ A  L + M K   L NV TY +LI+G+CK G +E+A     +M E G+ 
Sbjct: 119 DGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIM 178

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN   ++S+IDG  K GNID AM  ++EM  +S   D+V +  +I GL  +G + + L +
Sbjct: 179 PNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEV 238

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++M+   + P    +++L+H  FK G    A   + E  ++   G+  P+ V  +++I 
Sbjct: 239 MEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNR---GF-EPDAVTISSLID 294

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC DG+   A   F   +++ +     +YT ++ G+ +   + +V  ++ +M + G VP
Sbjct: 295 GLCKDGRYHDAKGYFCKEKANEV-----SYTALIDGICKEGNLDEVERVVMEMSESGFVP 349

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           D  +    +      G +  AF+    + E  I
Sbjct: 350 DKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGI 382



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 170/349 (48%), Gaps = 8/349 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI  +S++G+++ A  +Y+   K   LP +    AL+NG  K+G  +    F+
Sbjct: 110 NLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFF 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G++ +   Y  +ID    +G++  A+  F EM  +     +V Y ++I GL N 
Sbjct: 170 LKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNN 229

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +   +   M   G+ P+      LM  + K  +   A   Y E+L+   +P+ VT 
Sbjct: 230 GRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTI 289

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+DGLCK G    A  +F          N   Y  LIDG CK GNL E   +  EM +
Sbjct: 290 SSLIDGLCKDGRYHDAKGYFCKEK-----ANEVSYTALIDGICKEGNLDEVERVVMEMSE 344

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PD F Y   I  LC  G++  A  +  KM +EGI  +++TY+SLI G   +G M +
Sbjct: 345 SGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIE 404

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           A  +   M ++G+ P+ + F  LI G  K  N  A   L+ EM  + L+
Sbjct: 405 AKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGLL 453


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 261/536 (48%), Gaps = 21/536 (3%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VL 81
           L+ +RK           L  L  P  N   ++ LI  F + G + +A+ V+  ++   +L
Sbjct: 7   LVSARKHDQALRLFKEVLAGLFAP--NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLL 64

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N LL GL + G+  S  + + EM     +    ++ +L+      G V  AL  
Sbjct: 65  PNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAH 124

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENK----MVEAESMFRSMRECGVVPNLYTYNALMD 197
             +M           Y +++ GLC ENK    + +A   F+ M+  GV P+L +Y+ L+ 
Sbjct: 125 LQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLS 184

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
               ++D  R  E +         P+++T+ VLMDG CK+G+   A +    + K G  P
Sbjct: 185 A---LSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 241

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+F Y+ +I+ +CK   + EA  +  +M +    P+  T+N LI G C  G LE A  L 
Sbjct: 242 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 301

Query: 318 QKMYKEGILANVVTYNSLIDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            +M K G  A +VTYN+LID  CK+ G +  A+ + +++   G+ P +VT++SLI G C 
Sbjct: 302 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCD 361

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           A  +  AM  + EM  K   P+V+ ++ LIDGL K   MKE  +  ++M     TP+V T
Sbjct: 362 ARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVT 420

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
              LI+G  K G + +AL FF    +K     C+PN V++  +I  LC   +     +L 
Sbjct: 421 YGGLINGFCKCGELKSALLFF----EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             M ++  +PD  TY  ++ GL  A R+ D   L      M   P+      ++RG
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDG---MACAPNVTTFNFLIRG 529



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 239/508 (47%), Gaps = 57/508 (11%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNA 89
           H   SVF+ + S  +   N S  +TL++   E+G +  AL ++R+++    LP   + N 
Sbjct: 49  HQAVSVFSDMKSSGLLP-NASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNI 107

Query: 90  LLNGLIKKGK---------------------------------------FDSVWEFYEEM 110
           LL G    G+                                        +   EF++EM
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM 167

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D+ +Y +L+      G + +A  LF  M      P ++ Y +L+ G C   + 
Sbjct: 168 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 224

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+S+ + + + G  PN++TY+ +++ YCK+  V  A E + +M+  N  PN VTF  L
Sbjct: 225 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 284

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA-GNLFEAMSLCSEMEKFE 289
           + G CK G L  A   F  M K G    I  YN LID  CK  G ++ A+ L +++E   
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKA 348
           ++P + TYN LI+G C   +L  A     +M  EG  A NV+TY+ LIDG CK   M++A
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEA 402

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
                 M   G  P VVT+  LI+G CK G + +A+  + +M +    P+ V+F  LIDG
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K     + LRL   M      P V T + LI GL    R+ +A   F       DG  
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF-------DGMA 515

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLF 496
           C+PN   +  +I+ LC   ++ +A  + 
Sbjct: 516 CAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 238/471 (50%), Gaps = 15/471 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           NALL+GL+   K D     ++E VL GL A +  TY VLI   C  G + +A+++F +M 
Sbjct: 1   NALLSGLVSARKHDQALRLFKE-VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             G+ P       L+ GLC   +M  A  +FR M+    +P   ++N L+ G+     V 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLC----KVGELRAAGNFFVHMAKFGVFPNIFVY 262
            AL    +M   +      T+ +++ GLC        L  A  FF  M   GV P++  Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + L+     +G + EA +L S M     SPD+ TYN+L+ G C +GQ   A+ L++++ K
Sbjct: 180 HILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   NV TY+ +I+ YCK   +E+A  V  +M E    PN VTF++LI G CKAG ++ 
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGL-SKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           A+ L+ EM        +V +  LID L  K G +   + L+ ++  A +TP++ T +SLI
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G     R+S A+ +F E       G C+PN + Y+ +I  LC   ++ +A+K   DM++
Sbjct: 357 QGFCDARRLSEAMQYFDEME-----GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKA 411

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
               P   TY  ++ G  +   +   ++    M   G  P+ VI   ++ G
Sbjct: 412 HGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 218/432 (50%), Gaps = 13/432 (3%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL LF E++     P    Y +LI G C   +M +A S+F  M+  G++PN  T N L+
Sbjct: 15  QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 74

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C++  ++ AL+ + EM      P   +  +L+ G    G +R A      M K    
Sbjct: 75  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSS 134

Query: 257 PNIFVYNCLIDGHC----KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
                YN ++ G C     A  L +AM    EM+   + PD+ +Y+IL+  L   G++  
Sbjct: 135 VATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAE 194

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L   M       +++TYN L+DGYCK G   +A S+  ++ + G EPNV T+S +I+
Sbjct: 195 AHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 251

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK   ++ A  ++ +M+  + VP+ V F  LI G  K G +++ ++L+ EM +     
Sbjct: 252 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 311

Query: 433 SVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           ++ T ++LI  L K  G +  A++ F    +K +G   +P  V Y ++IQ  C   ++ +
Sbjct: 312 TIVTYNTLIDSLCKKRGGVYTAVDLF----NKLEGAGLTPTIVTYNSLIQGFCDARRLSE 367

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A + F +M      P+  TY+ ++ GL + +RM +    L DM   G  P  V    ++ 
Sbjct: 368 AMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLIN 426

Query: 552 GYQENGDLKSAF 563
           G+ + G+LKSA 
Sbjct: 427 GFCKCGELKSAL 438



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 177/377 (46%), Gaps = 12/377 (3%)

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           NAL+ G       ++AL  + E+L     PN  T+ VL+ G CK G++  A + F  M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN    N L+ G C+ G +  A+ L  EM+     P   ++NIL++G    G++  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGD----MEKALSVCSQMTEKGVEPNVVTFS 368
           A   LQ M K        TYN ++ G C E      +E+A+    +M   GVEP++ ++ 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L+     +G +  A  L++ M      PD++ +  L+DG  K G   E   L KE+L+A
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
              P+VFT S +I+   K  ++  A   F++  +      C PN V +  +I   C  G 
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN----CVPNAVTFNTLIAGFCKAGM 293

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK-RMLDVMMLLADMIKMGIVPDAVINQ 547
           +  A KLF++M     +    TY T++  L + +  +   + L   +   G+ P  V   
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 548 VMVRGYQENGDLKSAFR 564
            +++G+ +   L  A +
Sbjct: 354 SLIQGFCDARRLSEAMQ 370



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++L+ GL    +   AL  F E       G  +PN   Y  +I+  C  GQ+ +A  +FS
Sbjct: 1   NALLSGLVSARKHDQALRLFKE----VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFS 56

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DM+S  L P+  T  T+L GL    +M   + L  +M     +P +  + +++RG+   G
Sbjct: 57  DMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG 116

Query: 558 DLKSAFRCSEFLKESRIGSSETEGHT 583
            ++ A      L++ R  SS     T
Sbjct: 117 RVRDAL---AHLQDMRKSSSSVATGT 139


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/572 (28%), Positives = 280/572 (48%), Gaps = 34/572 (5%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEI---PKFNP--SVFST 57
           ++LA  +LY ++R     V   L+  R+PH +  S+ + L+   +   P+ +   SV  T
Sbjct: 73  HLLARDRLYAHSR----RVLSRLVALRRPH-LAASLVDLLHRAALALGPRRSALASVVDT 127

Query: 58  LIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+   ++ G +++A+      R++ V P  + CN +L  L +      V   +E++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              +V T+ ++ID  C +G++ +A +LF  M + G  P VV +  LI G     ++ E E
Sbjct: 185 -APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   MR  G   ++ TYNAL++ +CK   +  A  ++  M    +  NVVTF   +D  
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK G +R A   F  M   G+  N F Y CLIDG CKAG L +A+ L  EM +  +  +V
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TY +L+ GLC   ++  AE +L+ M K G+ AN + Y +LI G+    + EKAL + S+
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG+E ++  + +LI G C    +D A  L T+M    L P+ +++T ++D   K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E + + +++L++   P+             NG ++ A+  F E   K      S + V
Sbjct: 484 VPEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKG----MSLDKV 526

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           +Y A++      G +  A  L + M    L+ D   YT  + G      M +   + ++M
Sbjct: 527 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 586

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           I  GI PD  +   ++    E  +L    + S
Sbjct: 587 IGHGIAPDRAVYNCLITQIPEIRELGGGNKSS 618


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 164/523 (31%), Positives = 254/523 (48%), Gaps = 27/523 (5%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G  E+A  + R++     +P     + ++  L    K D+ +  +EEM    +V DV TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +LID  C  G + +A   FDEM+  G  P VV YT LIH      KM  A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH---------------NLQ-PNVVT 226
            G +PN+ TY AL+DG+CK   + +A + Y  M  +               N++ PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +G L+DGLCK  +++ A +    M+  G  PN  VY+ LIDG CK G L EA  + ++M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P+V+TY+ LI  L    +L+ A  +L +M +     NV+ Y  +IDG CK G  +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + S M EKG  PNVVT++++IDG  KAG +D  + L  +M  K   P+ V +  LI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +     G + +  +L  EM +      +     +I G  +   IS  L       D+   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL------LDEIAE 872

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS--DNLRPDNCTYTTMLRGLLRAKRM 524
               P    Y  +I + C  G++  A +L  +M S       D   Y++++  L  A ++
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
                L ADMIK G +P+  I   +V+G       + A + S+
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 250/557 (44%), Gaps = 29/557 (5%)

Query: 41  ALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKK 97
           AL   E  K +  +++ +I    E    EEA   L   R    +P +     LL G ++K
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            +          M+  G       +  LI   C  GD   A  L  +M D G +P  V+Y
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 158 TILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            ILI G+C   K+        AE  +  M +  VV N    + L    C      +A   
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             EM+     P+  T+  ++  LC   ++  A   F  M    V P++F Y  LID  CK
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L +A     EM +   +P+V TY  LI       ++  A  L + M  EG + NVVT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKG----------------VEPNVVTFSSLIDGQC 375
           Y +LIDG+CK G +EKA  + ++M                     +PN+ T+ +L+DG C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  +  A  L   M ++   P+ +V+ ALIDG  K G + E   ++ +M E    P+V+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLI  LFK+ R+  AL       + +    C+PN ++Y  +I  LC  G+  +A +L
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENS----CAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S M      P+  TYT M+ G  +A ++   + L+  M   G  P+ V  +V++     
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 556 NGDLKSAFRCSEFLKES 572
            G L  A +  + +K++
Sbjct: 824 AGLLDDAHQLLDEMKQT 840



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 245/499 (49%), Gaps = 23/499 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + S +S +I        ++ A  ++ +++   V+P +     L++   K G      +++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  G   +VVTY  LI        +  A  LF+ M+ +G  P VV YT LI G C  
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 168 NKMVEAESMFRSMRECGVVP----------------NLYTYNALMDGYCKVADVNRALEF 211
            ++ +A  ++  MR    +P                N++TY AL+DG CK   V  A + 
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M     +PN + +  L+DG CKVG+L  A   F  M++ G  PN++ Y+ LID   K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              L  A+ + S M +   +P+V  Y  +I GLC VG+ + A  L+  M ++G   NVVT
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y ++IDG+ K G ++K L +  QM  KG  PN VT+  LI+  C AG +D A  L  EM 
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                  +  +  +I+G +++  +  +L L  E+ E    P +     LI    K GR+ 
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL    E +  T   Y + +  LY+++I++L    ++ KA +L++DM      P+   +
Sbjct: 897 LALELHKEMSSCT--SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 512 TTMLRGLLRAKRMLDVMML 530
             +++GL+R  R  + + L
Sbjct: 955 FYLVKGLIRINRWEEALQL 973



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 220/493 (44%), Gaps = 58/493 (11%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           VLI  CC  G    AL     + D G +P+ + Y  L+      +++  A  + R M + 
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 184 GVVPNLYT--------------------------------YNALMDGYCKVADVNRALEF 211
           G   + YT                                Y  ++ G C+ +    A++F
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M   +  PNVVT+ +L+ G  +  +L         M   G +P+  ++N LI  +C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG------VGQLEGAEGLLQKMYKEGI 325
           +G+   A  L  +M      P    YNILI G+CG      +  LE AE    +M    +
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHV 441

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N V  ++L    C  G  EKA S+  +M  KG  P+  T+S +I   C A  +D A  
Sbjct: 442 VLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFL 501

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    +VPDV  +T LID   K G +++  + + EM+     P+V T ++LIH   
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD--- 502
           K  ++S+A   F  +   ++G  C PN V Y A+I   C  GQI KA ++++ MR +   
Sbjct: 562 KARKMSSANELF--EMMLSEG--CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 503 ------------NLR-PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
                       N+R P+  TY  ++ GL +A ++ +   LL  M   G  P+ ++   +
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 550 VRGYQENGDLKSA 562
           + G+ + G L  A
Sbjct: 678 IDGFCKVGKLDEA 690


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 260/525 (49%), Gaps = 8/525 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    + G ++ A  +  K+ V    P ++   AL+NGLIK   FD V    
Sbjct: 277 NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVL 336

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+  G   +VV +  LID  C  G++  AL + D MI K I PT V    L+ G C  
Sbjct: 337 DEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKS 396

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +++  AE+    +   G+  +     +++   CK    + A  F   ML  N +P+ +  
Sbjct: 397 DQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 456

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+ GLCK G+   A   +  + + G   +    N LI G C AG L EA  +  EM +
Sbjct: 457 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 516

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D  TYN LI G C  G++EG   L ++M K GI  ++ TYN L+ G C  G ++ 
Sbjct: 517 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDD 576

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  +    G+  N+ T+  +++G CKA  I+    L+ E++ K +  + +V+  +I 
Sbjct: 577 AIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIK 636

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              ++GN+   L+L + M    I P+  T SSLIHG+   G + +A +   E   +   G
Sbjct: 637 AHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE---G 693

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           +  PN V Y A+I   C  GQ+  A   + +M S N+ P+  TYT M+ G  +   M   
Sbjct: 694 FV-PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
             LL  M + GIVPD V   V+  G+ +  D+ +AF+ C +   E
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 797



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 193/369 (52%), Gaps = 5/369 (1%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +R  ++L  +  C     GL K GK     E +  ++  G  A  VT   LI   CG G 
Sbjct: 449 FRPSDLLLTMLVC-----GLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + +A  +  EM+++G+    + Y  LI G CNE K+     +   M + G+ P++YTYN 
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G C V  ++ A++ + E     L  N+ T+G++M+G CK   +    N F  +    
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  N  VYN +I  HC+ GN+  A+ L   M+   I P+  TY+ LI G+C +G +E A+
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+ +M KEG + NVV Y +LI GYCK G M+ A S   +M    + PN  T++ +IDG 
Sbjct: 684 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGY 743

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK GN++ A  L  +M    +VPDVV +  L +G  K  +M    ++  +M    +    
Sbjct: 744 CKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 803

Query: 435 FTVSSLIHG 443
            T ++L+HG
Sbjct: 804 ITYTTLVHG 812



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 277/577 (48%), Gaps = 11/577 (1%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           +FY+LA    + + +     +  +L+K+ +    C  VF  ++    P  +   F+ +I 
Sbjct: 196 VFYLLARKGTFPSLKT-CNFLLSSLVKANEFEKCC-EVFRVMSEGACP--DVFSFTNVIN 251

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  + G +E A+ ++ K+E L   P +   N ++NGL + G+ D+ +E  E+M + G+  
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++ TYG LI+         K  ++ DEMI  G  P VV++  LI G C    +  A  + 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M    + P   T  +LM G+CK   +  A     E+L   L  +      ++  LCK 
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
               +A  F   M      P+  +   L+ G CK G   EA  L   + +        T 
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI GLCG G+L  A  ++++M + G+  + +TYN+LI G+C EG +E    +  +MT+
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G++P++ T++ L+ G C  G +D A+ L+ E     L+ ++  +  +++G  K   +++
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L+ E+L  K+  +    + +I    +NG ++ AL   L +  K+ G    PN   Y+
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ--LLENMKSKG--ILPNCATYS 667

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           ++I  +C  G +  A  L  +MR +   P+   YT ++ G  +  +M        +MI  
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            I P+     VM+ GY + G+++ A      +KES I
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 764



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 201/389 (51%), Gaps = 10/389 (2%)

Query: 32  HHVC-----YSVFNALNSLEIPKFNPS--VFSTLIIAFSEMG-HIEEALWVYRKIEV-LP 82
           H +C     +S F     +    F PS  + + L+    + G H+E     +R +E   P
Sbjct: 426 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 485

Query: 83  AIQ-ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           A +   NAL++GL   GK        +EM+  GL  D +TY  LI   C +G V     L
Sbjct: 486 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 545

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +EM  +GI+P +  Y  L+ GLCN  K+ +A  ++   +  G++ N++TY  +M+GYCK
Sbjct: 546 REEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCK 605

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +      ++E+L   ++ N + + +++   C+ G + AA     +M   G+ PN   
Sbjct: 606 ANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 665

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C  G + +A  L  EM K    P+V  Y  LI G C +GQ++ AE    +M 
Sbjct: 666 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 725

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
              I  N  TY  +IDGYCK G+MEKA ++  +M E G+ P+VVT++ L +G CKA ++D
Sbjct: 726 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 785

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            A  +  +M  + L  D + +T L+ G +
Sbjct: 786 NAFKVCDQMATEGLPVDEITYTTLVHGWN 814



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 192/408 (47%), Gaps = 11/408 (2%)

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F  +   G  P+L T N L+    K  +  +  E +  M      P+V +F  +++
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 251

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LCK G++  A   F+ M K G+ PN+  YNC+I+G C+ G L  A  L  +M    + P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           ++ TY  LI GL  +   +    +L +M   G   NVV +N+LIDGYCK G++E AL + 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK--SLVPDVVVFTALIDGLS 410
             M  K + P  VT  SL+ G CK+  I+ A     E++    S+ PD     +++  L 
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY--SVVHWLC 429

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K        R  K ML     PS   ++ L+ GL K+G+   A   +    +K      S
Sbjct: 430 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG-----S 484

Query: 471 P-NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P + V   A+I  LC  G++ +AS++  +M    L  D  TY  ++ G     ++     
Sbjct: 485 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 544

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           L  +M K GI PD      ++RG    G L  A +  +  K S + S+
Sbjct: 545 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 273/548 (49%), Gaps = 8/548 (1%)

Query: 19  KDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI 78
           ++V  +++KS    H    V N L   E    + + ++ L +  S  G I+E   +++ +
Sbjct: 123 ENVRNSMIKSCVSSHEARFVLNLLTHHEF-SLSVTSYNRLFMVLSRFGLIDELNCLFKDM 181

Query: 79  ---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
               V P + + N ++N   K G       ++  ++  G   D  TY  LI   C   ++
Sbjct: 182 LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL 241

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A  +F+ M  +G     V YT LIHG C   K+ EA  +F  M+E G  P++ TY  L
Sbjct: 242 GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +  +C+V     AL+F+ EM+ + ++PNV T+ VL+D  CKVG++         M + G+
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             ++  +N LIDG+CK G + +A+ +   M+  ++ P+  TYN LI G C    ++ A  
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL KMY+  +  N+VTYN+LI G CK   ++ A  +   M + G  P+  TF + ID  C
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G ++ A  ++  +  K    +  ++TALIDG  K     +   L+K ML     P+  
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + L+ GL K G++ +A++  ++   K D     P    Y  +I+ +  +    +A+  
Sbjct: 542 TFNVLLDGLRKEGKVEDAMS-LVDVMGKFDA---KPTVHTYTILIEEILRESDFDRANMF 597

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M S   +P+  TYT  ++   R  R+L+   ++  + + GI+ D+ I  V+V  Y  
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657

Query: 556 NGDLKSAF 563
            G L SAF
Sbjct: 658 IGQLDSAF 665



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 252/531 (47%), Gaps = 16/531 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  F E+G I+EAL ++ +++     P +     L+    + GK     +F+
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEMV  G+  +V TY VLID  C  G + + + +   M++KG+  +VV +  LI G C  
Sbjct: 319 EEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKR 378

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M +A  +  SM+   V PN  TYN L+ G+C+   ++RA+   ++M  + L PN+VT+
Sbjct: 379 GMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTY 438

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLCK   + +A      M K G  P+   +   ID  CK G + +A  +   +++
Sbjct: 439 NTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE 498

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                + F Y  LI G C   +   A  L ++M  EG   N +T+N L+DG  KEG +E 
Sbjct: 499 KHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVED 558

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+S+   M +   +P V T++ LI+   +  + D A     +M+     P+VV +TA I 
Sbjct: 559 AMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIK 618

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              + G + E   +  ++ E  I    F    L++     G++ +A    +   D     
Sbjct: 619 AYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG--- 675

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C P+   Y+ +++ L ++    +   L  D+ S N+  DN         + +      +
Sbjct: 676 -CEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDNA-------NIWKIADFEII 725

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
            ML   M++ G VP+      +++G  +   L  AFR    +KES I  SE
Sbjct: 726 TMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 239/568 (42%), Gaps = 68/568 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+ AF E+G   EAL  + ++    + P +     L++   K GK D   E    M
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 111 VLCGLVADVVTYGVLIDCCCGQG---------DVMK------------------------ 137
           +  GLV+ VV +  LID  C +G         D MK                        
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416

Query: 138 --ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             A+ L ++M +  + P +V Y  LIHGLC    +  A  +   M + G VP+  T+ A 
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAF 476

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +D  CK+  V +A + +  +   + + N   +  L+DG CK  +   A   F  M   G 
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
           FPN   +N L+DG  K G + +AMSL   M KF+  P V TY ILI+ +      + A  
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L +M   G   NVVTY + I  YC++G + +A  +  ++ E+G+  +   +  L++   
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL---------------- 419
             G +D+A G+   M      P    ++ L+  L  +   KE +                
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANI 716

Query: 420 ----------RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
                      L+++M+E    P+V T S LI GL K   +S A   F    +       
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF----NHMKESGI 772

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           SP+  ++ +++ + C  G   +A +L   M   N      +Y  ++ GL           
Sbjct: 773 SPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEE 832

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENG 557
           +   ++  G   D V+ +V++ G    G
Sbjct: 833 IFRSLLSCGYNYDEVVWKVLLDGLVRKG 860



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 33/336 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ L+    + G +E+A+    V  K +  P +     L+  ++++  FD    F 
Sbjct: 539 NSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFL 598

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M+  G   +VVTY   I   C QG +++A  +  ++ ++GI     IY +L++     
Sbjct: 599 DQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCI 658

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMD--------------------------GYCK 201
            ++  A  +   M + G  P+  TY+ L+                              K
Sbjct: 659 GQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWK 718

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +AD       + +M+     PNV T+  L+ GLCKV  L  A   F HM + G+ P+  +
Sbjct: 719 IADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENI 778

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N L+   CK G   EA+ L   M ++     + +Y +L+ GL   G  E AE + + + 
Sbjct: 779 HNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLL 838

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             G   + V +  L+DG  ++G +++    CSQ+ +
Sbjct: 839 SCGYNYDEVVWKVLLDGLVRKGYVDE----CSQLRD 870



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 56/283 (19%)

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN-----------------VVTYNSLI 336
           V +Y  L+  L   G L  AE +   M K  + ++                 V +YN L 
Sbjct: 103 VHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLF 162

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
               + G +++   +   M   GVEPN+++F+++++  CK GN                 
Sbjct: 163 MVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGN----------------- 205

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
             VVV  A   GL K G                     FT +SLI G  K   + +A   
Sbjct: 206 --VVVAKAYFCGLMKFG----------------FCCDSFTYTSLILGYCKIHELGDAYKV 247

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F  +    +G  C  N V Y  +I   C  G+I +A +LF  M+ D   PD  TYT ++ 
Sbjct: 248 F--EIMPQEG--CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVA 303

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                 +  + +    +M++ GI P+     V++  + + G +
Sbjct: 304 AFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKM 346



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF++M+++G  P V  Y+ LI GLC    +  A  +F  M+E G+ P+   +N+L+   C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K+     AL     M+ +N   ++ ++ +L+ GL + G    A   F  +   G   +  
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
           V+  L+DG  + G + E   L   MEK        T+ +L + L G 
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQELNGT 894


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  ++ TYG+LI  CC  G +         +I KG     + +T L+ G
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M + G +PN+++YN L+ G C                      
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 201 ---------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                          K  D+++A   YHEML   + PNVVT+  ++  LCK   +  A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K GV PN   YN ++ G+C +G   EA+    +M    + PDV TYN L+  LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            FS LI    K G +D AM ++++M  + L PD V +  +I  L K G +++ +R +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++ +++P     +SLIH L    +   A    LE  D+   G C  + + + +II + C 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR---GIC-LDTIFFNSIIDSHCK 491

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+++++ KLF  M    ++PD  TY+T++ G   A +M +   LLA M+ +G+ PD V 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 546 NQVMVRGY 553
              ++ GY
Sbjct: 552 YNTLINGY 559



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 260/548 (47%), Gaps = 46/548 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS   L+    +    +EAL + + +     +  P + +   ++NG  K+G  D  +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y EM+  G++ +VVTY  +I   C    + KA+ +   M+  G+ P    Y  ++HG 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  EA    + M   GV P++ TYN+LMD  CK      A + +  M    L+P +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+G L+ G    G L         M + G+ PN +V++ LI  + K G + +AM + S+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--------------------- 323
           M +  ++PD  TY  +I  LC  G++E A    ++M  E                     
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 324 --------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                         GI  + + +NS+ID +CKEG + ++  +   M   GV+P+++T+S+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C AG +D A  L   MV   + PD V +  LI+G  K   M++ L L++EM  + 
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ++P + T + ++ GLF+  R + A   ++  T+       S     Y  I+  LC +   
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST----YNIILHGLCKNNLT 635

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 550 VRGYQENG 557
                E G
Sbjct: 696 AENLIEQG 703



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 261/551 (47%), Gaps = 10/551 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I A  +   +++A+ V     K  V+P  +  N++++G    G+      F 
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P +  Y  L+ G   +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VE   +   M   G+ PN Y ++ L+  Y K   V++A+  + +M    L P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G ++  LCK G +  A  +F  M    + P   VYN LI   C      +A  L  EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N +I   C  G++  +E L   M + G+  +++TY++LIDGYC  G M++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M   G++P+ VT+++LI+G CK   ++ A+ L+ EM    + PD++ +  ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL +         LY  + E+     + T + ++HGL KN     AL  F +    TD  
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF-QNLCLTD-- 649

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                   +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M   L+    + ++
Sbjct: 650 -LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L   M + G   ++ +   +VR   + GD+  A      + E        E  T   F
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF---SLEASTASLF 765

Query: 588 LGHLKPTVYKE 598
           L  L    Y+E
Sbjct: 766 LDLLSGGKYQE 776



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 179/365 (49%), Gaps = 52/365 (14%)

Query: 243 AGNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFEAMSLCSEMEKF---EISPDVFT 296
           A + F  + + G   +I+  NC    +  H  A     A+S  + M +    E++P++ T
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA----AVSRYNRMARAGADEVTPNLCT 93

Query: 297 YNILIKGLCGVGQL------------------------------------EGAEGLLQKM 320
           Y ILI   C  G+L                                    +  + +L++M
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAG 378
            + G + NV +YN L+ G C E   ++AL +   M + G +  P+VV+++++I+G  K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A G Y EM+ + ++P+VV ++++I  L K   M + + +   M++  + P+  T +
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++HG   +G+   A+ F   K   +DG    P+ V Y +++  LC +G+  +A K+F  
Sbjct: 274 SIVHGYCSSGQPKEAIGFL--KKMHSDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+P+  TY T+L+G      ++++  LL  M++ GI P+  +  +++  Y + G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 559 LKSAF 563
           +  A 
Sbjct: 390 VDQAM 394



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 10/285 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V PN+ T+
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    P+VF+ + L+ GL    R   AL       D  DGG C P+ V Y  +I     +
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKE 212

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + KA   + +M    + P+  TY++++  L +A+ M   M +L  M+K G++P+    
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             +V GY  +G  K A     FLK+      E +  T  S + +L
Sbjct: 273 NSIVHGYCSSGQPKEAI---GFLKKMHSDGVEPDVVTYNSLMDYL 314



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 16/258 (6%)

Query: 319 KMYKEG---ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +M + G   +  N+ TY  LI   C  G ++   +    + +KG   + + F+ L+ G C
Sbjct: 78  RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 137

Query: 376 KAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITP 432
                  AM +    M     +P+V  +  L+ GL  +   +E L L + M +      P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V + +++I+G FK G +  A   + E  D+       PN V Y++II ALC    + KA
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG----ILPNVVTYSSIIAALCKAQAMDKA 253

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ + M  + + P+  TY +++ G   + +  + +  L  M   G+ PD V    ++  
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313

Query: 553 YQENGDLKSAFRCSEFLK 570
             +NG      RC+E  K
Sbjct: 314 LCKNG------RCTEARK 325


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 254/501 (50%), Gaps = 9/501 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I    +   + EA  +++++   E  P     +AL++G  K G  +  +   EEM 
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  DV  Y  LI   C +GD+ +   LF+EM+ K + P VV Y+ L++ LC + K  
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  M  +M  C V P++  Y  L DG  K    + A++    M+    +PN VT+  ++
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKFE 289
           +GLCK G +  A      MAK G  P++  Y+ L+ G C  G + EA+ L + +  ++F 
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH 406

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PDVF +N++I+ LC   +L  A+ +   M + G  +N+VTYN LIDGY   G + KAL
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKAL 466

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +     + G+ PN  T++ LI+G CK   +  A GL+ +       P V  +  L+  L
Sbjct: 467 ELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            ++ ++++   L++EM  A   P V + + +I G  K G + +A    LE  +       
Sbjct: 527 CRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNL---- 582

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+++ ++ +I      GQ+ +A+ L+  M S    PD   + ++L+G     +   V+ 
Sbjct: 583 VPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVS 642

Query: 530 LLADMIKMGIVPDAVINQVMV 550
           +L  M    +V D+ +   ++
Sbjct: 643 MLQQMADKDVVLDSKLTSTIL 663



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 267/571 (46%), Gaps = 51/571 (8%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACN 88
           HH      N+     IP +  S  +TLI    +  H +  + V+ K   + V P   + +
Sbjct: 46  HHTLQDYPNS-----IPSY--SSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLS 98

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           AL+   +   K    +     ++  G   +V  + +L+   C  GD  KA++LF  M   
Sbjct: 99  ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN 158

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            + P  V Y  +I+GLC   ++VEA+ +F+ M+     PN  T++AL+DG+CK  DV   
Sbjct: 159 CLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEG 218

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
                EM    L+ +V  +  L+ G C  G++      F  M +  V PN+  Y+CL++ 
Sbjct: 219 FGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNA 278

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK     EA  +   M   ++ PDV  Y +L  GL   G+   A  +L  M K G   N
Sbjct: 279 LCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPN 338

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL-- 386
            VTYN++I+G CKEG ++ AL +   M +KG +P+VVT+S+L+ G C  G ID A+ L  
Sbjct: 339 NVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398

Query: 387 -----------------------------------YTEMVIKSLVPDVVVFTALIDGLSK 411
                                              Y  MV +    ++V +  LIDG   
Sbjct: 399 LLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLS 458

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + + L L+K+ +++ I+P+  T + LI+GL K   +S A   F    +K       P
Sbjct: 459 AGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF----NKKRASGTRP 514

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               Y  ++ +LC +  + +A  LF +MR+ N  PD  ++  ++ G L+A  +     LL
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +M+ M +VPD +   +++  + + G L  A
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEA 605



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 244/540 (45%), Gaps = 44/540 (8%)

Query: 61  AFSE-MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           A SE + H    L  Y     +P+  +CN L++ L K   +D V   + +M    +    
Sbjct: 37  ALSESLSHFHHTLQDYP--NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCF 94

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            +   LI+          A  +   ++ +G    V  + +L+ G C      +A  +F  
Sbjct: 95  TSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCM 154

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M+   ++P+  +YN +++G CK   +  A E + EM     +PN VTF  L+DG CK G+
Sbjct: 155 MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +         M K G+  ++FVY+ LI G C  G++     L +EM +  ++P+V TY+ 
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSC 274

Query: 300 LIKGLCGV-----------------------------------GQLEGAEGLLQKMYKEG 324
           L+  LC                                     G+   A  +L  M K G
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              N VTYN++I+G CKEG ++ AL +   M +KG +P+VVT+S+L+ G C  G ID A+
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 385 GLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            L   ++ K   + PDV  F  +I  L K   ++   R+Y  M+E     ++ T + LI 
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G    G+++ AL  +    D  D G  SPN   Y  +I  LC    +  A  LF+  R+ 
Sbjct: 455 GYLSAGKLTKALELW---KDAVDSGI-SPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             RP    Y T++  L R   +     L  +M      PD V   +++ G  + GD++SA
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 215/415 (51%), Gaps = 5/415 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+S LI  F   G IE    ++ ++    V P +   + L+N L KK K+    +  + M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
             C +  DVV Y VL D     G    A+ + D M+ +G EP  V Y  +I+GLC E ++
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVTFG 228
            +A  +  +M + G  P++ TY+ L+ G C V  ++ A++  + ++    +++P+V  F 
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++  LCK   LR A   +  M + G   NI  YN LIDG+  AG L +A+ L  +    
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            ISP+  TY +LI GLC +  L  A+GL  K    G    V  YN+L+   C+E  +E+A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            ++  +M     +P+VV+F+ +IDG  KAG++++A  L  EM+  +LVPD + F+ LI+ 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             K G + E   LY+ M+     P      SL+ G    G+    ++   +  DK
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 215/428 (50%), Gaps = 28/428 (6%)

Query: 23  ENLLKSRKPHHVCYS-VFNAL-------------NSLEIPKFNPSVFSTLIIA--FSEMG 66
           E L K+  P+ V YS + NAL             +++   K  P V +  ++A   S+ G
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNG 318

Query: 67  HIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
              +A     L V R  E  P     NA++NGL K+G+ D      E M   G   DVVT
Sbjct: 319 RASDAIKVLDLMVKRGEE--PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           Y  L+   CG G + +A++L + ++ K   I+P V  + ++I  LC + ++  A+ ++ +
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M E G   N+ TYN L+DGY     + +ALE + + +   + PN  T+ VL++GLCK+  
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A   F      G  P +  YN L+   C+  ++ +A +L  EM      PDV ++NI
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I G    G +E A+ LL +M    ++ + +T++ LI+ + K G +++A S+  +M   G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID---GLSKDGNMK 416
             P+ V F SL+ G    G  +  + +  +M  K +V D  + + ++     +SKD +++
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIE 676

Query: 417 ETLRLYKE 424
           + L  + +
Sbjct: 677 KILPKFSQ 684



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 171/393 (43%), Gaps = 59/393 (15%)

Query: 2   FYVLANAKLYKNARC--LIKDVTENLLKSRKPHHVCYS-----------VFNALNSLEI- 47
           + VLA+  L KN R    IK +   + +  +P++V Y+           V +AL  LE  
Sbjct: 307 YTVLADG-LSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365

Query: 48  ----PKFNPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKG 98
                K +   +STL+     +G I+EA     L + ++  + P + A N ++  L K+ 
Sbjct: 366 AKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQR 425

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +       Y  MV  G  +++VTY +LID     G + KAL L+ + +D GI P    YT
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT 485

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +LI+GLC    +  A+ +F   R  G  P +  YN LM   C+ + V +A   + EM + 
Sbjct: 486 VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545

Query: 219 NLQPNV-----------------------------------VTFGVLMDGLCKVGELRAA 243
           N  P+V                                   +TF +L++   K+G+L  A
Sbjct: 546 NHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEA 605

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            + +  M   G  P+  +++ L+ G+   G   + +S+  +M   ++  D    + ++  
Sbjct: 606 ASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILAC 665

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           LC + +    E +L K  +   +   +  N L+
Sbjct: 666 LCNMSKDVDIEKILPKFSQHTSVGASIKCNELL 698



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 4/278 (1%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P   + N LI  L      +    +  KM    +     + ++LI+ +        A  V
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              + ++G   NV  F+ L+ G C++G+   AM L+  M    L+PD V +  +I+GL K
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + E   L+KEM   +  P+  T S+LI G  KNG +       LE+ +K        
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL-LEEMEKMG---LEG 232

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +  +Y+A+I   C  G I +  +LF++M   N+ P+  TY+ ++  L + ++  +   +L
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
             M    + PD V   V+  G  +NG    A +  + +
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 10/171 (5%)

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA-- 453
           +P       LID L K  +    + ++ +M    + P   ++S+LI       + S A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 454 -LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            L   +++      G+   N   +  +++  C  G   KA  LF  M+ + L PD  +Y 
Sbjct: 116 VLGLIMKR------GF-HLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYN 168

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           T++ GL + KR+++   L  +M      P++V    ++ G+ +NGD++  F
Sbjct: 169 TVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 250/499 (50%), Gaps = 20/499 (4%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + F  L++A S  G  +EA+  + ++   +  P     NA+   L+ +G        Y  
Sbjct: 145 AAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNR 204

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G + +  TY VL+D  C +G  + AL +FDEM+++GI P V IYT+L+  LCNE +
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGR 264

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +  SM+E G  P+  TY   + G CK   V+ A   +  +        ++ +  
Sbjct: 265 IEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSC 324

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DGL + G      +++  M    + P+I +Y  LI    +AG   +A  L  EM+   
Sbjct: 325 LIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKG 384

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD F YN L+K L  VG ++ A+ L+ +M +  ++ +  T+N +I G CK+G ++KA+
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAM 444

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-------------KSLV 396
            V  +M E G  P V+T+++LIDG  +AG ++ A  L+ +M +              + V
Sbjct: 445 QVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQV 504

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D      L+DG+ + G + +  +L + ++E+ + P V T ++LI+GL K   +  AL  
Sbjct: 505 RDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRL 564

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E   K      SP+ + Y  +I  L    +   A+ LF ++      P    Y TM+R
Sbjct: 565 FKELQLKG----ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMR 620

Query: 517 GLLRAKRMLDVMMLLADMI 535
            L R K++   + L  D +
Sbjct: 621 SLCRMKKLSQAINLWLDYL 639



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 226/486 (46%), Gaps = 20/486 (4%)

Query: 81  LPAIQAC-NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           LPA  A   AL+      G+     E +  M           Y  +      +G ++ AL
Sbjct: 140 LPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLAL 199

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L++ M+  G  P    Y +L+ GLC     V+A  MF  M E G+VP++  Y  L+   
Sbjct: 200 ALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSL 259

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C    +  A      M  +   P+ VT+ V + GLCK G +  A + F  +   G    +
Sbjct: 260 CNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGL 319

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y+CLIDG  +AG   E +S  +EM    ISPD+  Y ILI+     G+ + A  LL +
Sbjct: 320 IGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G + +   YN+L+      G++++A S+ S+M +  V  +  T + +I G CK G 
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF---- 435
           ID AM ++ EM      P V+ + ALIDGL + G ++E   L+ +M E    PS+F    
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLT 498

Query: 436 ----------TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
                     ++  L+ G+ ++G++  A        +        P+ V Y  +I  LC 
Sbjct: 499 LGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESG----VVPDVVTYNTLINGLCK 554

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
              +  A +LF +++   + PD  TY T++ GL RA R  D  ML  ++++ G  P   I
Sbjct: 555 AKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPI 614

Query: 546 NQVMVR 551
              M+R
Sbjct: 615 YNTMMR 620



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 201/457 (43%), Gaps = 20/457 (4%)

Query: 138 ALNLFDEMIDK---GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           A+ +FD + D    G+      +  L+    +  +  EA   F  M +    P  + YNA
Sbjct: 125 AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNA 184

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +         +  AL  Y+ M+     PN  T+ VLMDGLCK G    A   F  M + G
Sbjct: 185 VFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG 244

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++ +Y  L+   C  G + +A  L   M++    PD  TY + + GLC  G+++ A 
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAF 304

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
              + +   G    ++ Y+ LIDG  + G  ++ LS  ++M  K + P++  ++ LI   
Sbjct: 305 HRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF 364

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            +AG    A  L  EM  K  VPD   +  L+  L   GN+     L  EML+  +    
Sbjct: 365 AEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDS 424

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + +I GL K G I  A+  F    D+     C P  + Y A+I  L   G + +A  
Sbjct: 425 TTHNIMICGLCKKGLIDKAMQVF----DEMGEHGCHPTVMTYNALIDGLYRAGMLEEARM 480

Query: 495 LFSDMRSDN-----LR--------PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           LF  M   N     LR         D  +   ++ G+ ++ ++L    LL  +I+ G+VP
Sbjct: 481 LFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVP 540

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           D V    ++ G  +  +L  A R  + L+   I   E
Sbjct: 541 DVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDE 577



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 186/418 (44%), Gaps = 22/418 (5%)

Query: 172 EAESMFRSM---RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +A +MF ++   R  G+      + AL+  +        A+E +  M   + +P    + 
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYN 183

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +   L   G +  A   +  M   G  PN   Y  L+DG CK G   +A+ +  EM + 
Sbjct: 184 AVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER 243

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PDV  Y +L+  LC  G++E A  LL  M + G   + VTY   + G CK G +++A
Sbjct: 244 GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEA 303

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
                 + + G    ++ +S LIDG  +AG  D  +  YTEM+ KS+ PD+ ++T LI  
Sbjct: 304 FHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRR 363

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            ++ G  K+   L  EM +    P  F  ++L+  LF  G I  A +   E         
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN---- 419

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              +   +  +I  LC  G I KA ++F +M      P   TY  ++ GL RA  + +  
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEAR 479

Query: 529 MLLADMIKMGIVPDAVI------NQV--------MVRGYQENGDLKSAFRCSEFLKES 572
           ML   M +MG  P   +      NQV        +V G  ++G +  A++    + ES
Sbjct: 480 MLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIES 536



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 87/386 (22%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           ++++ LI  F+E G  ++A  +  +++    +P     N LL  L   G  D       E
Sbjct: 355 TLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSE 414

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL----- 164
           M+   +V D  T+ ++I   C +G + KA+ +FDEM + G  PTV+ Y  LI GL     
Sbjct: 415 MLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGM 474

Query: 165 -------------------------------------------CNENKMVEAESMFRSMR 181
                                                      C   ++++A  + R + 
Sbjct: 475 LEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGII 534

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           E GVVP++ TYN L++G CK  +++ AL  + E+    + P+ +T+G L+DGL +     
Sbjct: 535 ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKFEISP------- 292
            A   F ++ + G FP++ +YN ++   C+   L +A++L  +   +K+ +SP       
Sbjct: 595 DATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN 654

Query: 293 ------DVF---------------------TYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
                 D F                      Y I + GLC V +++ A  +   + + GI
Sbjct: 655 ARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGI 714

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSV 351
           +        LI+  C + ++  A+ +
Sbjct: 715 VVTPACCALLINYLCWDRNLNAAVDI 740


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 232/426 (54%), Gaps = 7/426 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + +L+ + K   +D V   +  M +CG+  D+ +Y ++I+C C     + AL+
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M+  G EP VV  + LI+G C  N++ +A  +   M E G  P++  YN ++DG C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K+  VN A+E +  M    ++ + VT+  L+ GLC  G    A      M    + PN+ 
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  +ID   K G   EAM L  EM +  + PDVFTYN LI GLC  G+++ A+ +L  M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G L +VVTYN+LI+G+CK   +++   +  +M ++G+  + +T++++I G  +AG  
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           DAA  +++ M  +   P++  ++ L+ GL  +  +++ L L++ M +++I   + T + +
Sbjct: 307 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG+ K G + +A + F   + K       P+ V Y  +I   C   Q  K+  L+  M+
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKG----LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 419

Query: 501 SDNLRP 506
            D L P
Sbjct: 420 EDGLLP 425



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 210/409 (51%), Gaps = 7/409 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI     P++V ++ ++  +          S+F  M  CG+  +LY+YN +++  C+ + 
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
              AL    +M+    +P+VVT   L++G C+   +  A +    M + G  P++ +YN 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +IDG CK G + +A+ L   ME+  +  D  TYN L+ GLC  G+   A  L++ M    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I+ NV+T+ ++ID + KEG   +A+ +  +MT + V+P+V T++SLI+G C  G +D A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +   MV K  +PDVV +  LI+G  K   + E  +L++EM +  +     T +++I G 
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           F+ GR   A   F     +       PN   Y+ ++  LC + ++ KA  LF +M+   +
Sbjct: 301 FQAGRPDAAQEIFSRMDSR-------PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             D  TY  ++ G+ +   + D   L   +   G+ PD V    M+ G+
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +P++  ++ ++    K  + +  +  +H M    +  ++ ++ ++++ LC+      A +
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M KFG  P++   + LI+G C+   +F+A+ L S+ME+    PDV  YN +I G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G +  A  L  +M ++G+ A+ VTYNSL+ G C  G    A  +   M  + + PNV+
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TF+++ID   K G    AM LY EM  + + PDV  + +LI+GL   G + E  ++   M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +     P V T ++LI+G  K+ R+      F E   +   G    + + Y  IIQ    
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG----DTITYNTIIQGYFQ 302

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G+   A ++FS M S   RP+  TY+ +L GL    R+   ++L  +M K  I  D   
Sbjct: 303 AGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 359

Query: 546 NQVMVRGYQENGDLKSAF 563
             +++ G  + G+++ A+
Sbjct: 360 YNIVIHGMCKIGNVEDAW 377



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 6/275 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++L+      G   +A  + R +   +++P +    A+++  +K+GKF    + YEEM 
Sbjct: 153 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 212

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DV TY  LI+  C  G V +A  + D M+ KG  P VV Y  LI+G C   ++ 
Sbjct: 213 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E   +FR M + G+V +  TYN ++ GY +    + A E +  M   + +PN+ T+ +L+
Sbjct: 273 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILL 329

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC    +  A   F +M K  +  +I  YN +I G CK GN+ +A  L   +    + 
Sbjct: 330 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 389

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           PDV +Y  +I G C   Q + ++ L +KM ++G+L
Sbjct: 390 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 4/206 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++V FS ++    K+ N D  + L+  M +  +  D+  +  +I+ L +       L +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M++    P V TVSSLI+G  +  R+ +A++     +   + G+  P+ V+Y  II 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV---SKMEEMGF-RPDVVIYNTIID 123

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G +  A +LF  M  D +R D  TY +++ GL  + R  D   L+ DM+   IVP
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSE 567
           + +    ++  + + G    A +  E
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYE 209



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 73/133 (54%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++T+I  + + G  + A  ++ +++  P I+  + LL GL    + +     +E M    
Sbjct: 293 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 352

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  D+ TY ++I   C  G+V  A +LF  +  KG++P VV YT +I G C + +  +++
Sbjct: 353 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 412

Query: 175 SMFRSMRECGVVP 187
            ++R M+E G++P
Sbjct: 413 LLYRKMQEDGLLP 425


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 265/557 (47%), Gaps = 45/557 (8%)

Query: 37   SVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNAL 90
            +V + L S+ +    P+      L+ A+++ G + +A  +  ++      LP +  CN L
Sbjct: 1059 AVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRL 1118

Query: 91   LNGLIKKGKFDSVWEFYEEMV-----------------LC------------------GL 115
            L  L+++ ++D   + Y+EM+                 LC                  G 
Sbjct: 1119 LKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGC 1178

Query: 116  VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
            +  VV Y VLID  C +GD+ + L L  EM  KG  PT+V Y  LI+ L  +  + +  S
Sbjct: 1179 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGS 1238

Query: 176  MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            +F  MR+ G  PN+  YN+++D  CK     +A+    +M      P+++TF  L+ GLC
Sbjct: 1239 LFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1298

Query: 236  KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
              G +R A +F     +  + PN   Y  LI G C  G L  A  L  EM     +PDV 
Sbjct: 1299 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1358

Query: 296  TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            T+  LI GL   G++  A  + +KM +  +  +V  YN LI G CK+  +  A ++  +M
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 356  TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             EK V+P+   +++LIDG  ++ N+  A  ++  M  K + PD+V   A+I G  + G M
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 416  KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
             E +     M +    P  FT +++I G  K G ++ AL +  +   +     C PN V 
Sbjct: 1479 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK----CKPNVVT 1534

Query: 476  YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
            Y+++I   C  G    A  LF++M+++ L P+  TYT ++  L +  ++L   +    M+
Sbjct: 1535 YSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1594

Query: 536  KMGIVPDAVINQVMVRG 552
                 P+ V    +V G
Sbjct: 1595 LNHCSPNDVTLHYLVNG 1611



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 220/438 (50%), Gaps = 4/438 (0%)

Query: 81   LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            +P +   N L++G  ++G          EM   G +  +VTYG LI+    +GD+ K  +
Sbjct: 1179 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGS 1238

Query: 141  LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            LF EM  +G  P V IY  +I  LC      +A  + + M   G  P++ T+N L+ G C
Sbjct: 1239 LFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1298

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                V +A  F  E +   L PN +++  L+ G C  GEL  A +  V M   G  P++ 
Sbjct: 1299 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1358

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             +  LI G   AG + EA+ +  +M + ++ PDV  YN+LI GLC    L  A+ +L++M
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             ++ +  +   Y +LIDG+ +  ++  A  +   M  KG+ P++V+ +++I G C+ G +
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
              A+   + M     +PD   +T +I G +K GN+   LR   +M++ K  P+V T SSL
Sbjct: 1479 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1538

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            I+G  K G    A   F     +      SPN V Y  +I +L    ++L+A   F  M 
Sbjct: 1539 INGYCKTGDTDFAEGLFANMQAEA----LSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1594

Query: 501  SDNLRPDNCTYTTMLRGL 518
             ++  P++ T   ++ GL
Sbjct: 1595 LNHCSPNDVTLHYLVNGL 1612



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 243/517 (47%), Gaps = 22/517 (4%)

Query: 55   FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            ++ LI  +   G +   L +  ++E    LP +    +L+N L KKG  + +   + EM 
Sbjct: 1185 YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1244

Query: 112  LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              G   +V  Y  +ID  C      +A+ +  +M   G +P ++ +  LI GLC+E  + 
Sbjct: 1245 KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            +AE   R      + PN  +Y  L+ G+C   ++  A +   EM+     P+VVTFG L+
Sbjct: 1305 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 1364

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             GL   G++  A      M +  VFP++ +YN LI G CK   L  A ++  EM +  + 
Sbjct: 1365 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1424

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            PD F Y  LI G      L  A  + + M  +GI  ++V+ N++I GYC+ G M +A+  
Sbjct: 1425 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILC 1484

Query: 352  CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             S M + G  P+  T++++I G  K GN++ A+    +M+ +   P+VV +++LI+G  K
Sbjct: 1485 MSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCK 1544

Query: 412  DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             G+      L+  M    ++P+V T + LI  LFK  ++  A  +F    +     +CSP
Sbjct: 1545 TGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYF----ETMLLNHCSP 1600

Query: 472  NHVLYAAIIQAL------------CYDGQILKASKL---FSDMRSDNLRPDNCTYTTMLR 516
            N V    ++  L            C   ++     L   F  +  D   P N  Y  ++ 
Sbjct: 1601 NDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIF 1660

Query: 517  GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             L R   + + +     M K G VP+ +    ++ G+
Sbjct: 1661 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 1697



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 241/508 (47%), Gaps = 16/508 (3%)

Query: 42   LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
            L  +E   F P++  + +LI    + G +E+   ++   RK    P +Q  N++++ L K
Sbjct: 1205 LGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCK 1264

Query: 97   KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
                       ++M   G   D++T+  LI   C +G V KA +   E I + + P  + 
Sbjct: 1265 CRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 1324

Query: 157  YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
            YT LIHG C   +++ A  +   M   G  P++ T+ AL+ G      V+ AL    +M 
Sbjct: 1325 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1384

Query: 217  HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               + P+V  + VL+ GLCK   L AA N    M +  V P+ FVY  LIDG  ++ NL 
Sbjct: 1385 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1444

Query: 277  EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            +A  +   ME   I PD+ + N +IKG C  G +  A   +  M K G + +  TY ++I
Sbjct: 1445 DARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1504

Query: 337  DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             GY K+G++  AL     M ++  +PNVVT+SSLI+G CK G+ D A GL+  M  ++L 
Sbjct: 1505 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALS 1564

Query: 397  PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK---------- 446
            P+VV +T LI  L K   +      ++ ML    +P+  T+  L++GL            
Sbjct: 1565 PNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSIC 1624

Query: 447  -NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             N    +  +  L    K       P +  Y AII +LC    + +A    + M      
Sbjct: 1625 CNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYV 1684

Query: 506  PDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
            P+  T+ ++L G     + ++   +L +
Sbjct: 1685 PNPITFLSLLYGFCSVGKSVNWRTILPN 1712



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 213/466 (45%), Gaps = 5/466 (1%)

Query: 100  FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYT 158
            FD+V +  + M L G        G L+      G + KA  + + + ++ G  P V    
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116

Query: 159  ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
             L+  L  + +  +A  ++  M       + Y+   L+ G C    V   L+        
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176

Query: 219  NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
               P+VV + VL+DG C+ G++         M   G  P +  Y  LI+   K G+L + 
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             SL  EM K   SP+V  YN +I  LC       A  +L++M+  G   +++T+N+LI G
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296

Query: 339  YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             C EG + KA     +   + + PN ++++ LI G C  G +  A  L  EM+ +   PD
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356

Query: 399  VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            VV F ALI GL   G + E L + ++M E ++ P V   + LI GL K   +  A N   
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416

Query: 459  EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            E  +K       P+  +YA +I        +  A K+F  M    + PD  +   M++G 
Sbjct: 1417 EMLEKN----VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGY 1472

Query: 519  LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +   M + ++ +++M K+G +PD      ++ GY + G+L  A R
Sbjct: 1473 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1518



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 207/441 (46%), Gaps = 15/441 (3%)

Query: 134  DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTY 192
            D +++++L       G  PT      L+    +   + +A  M   +RE  G +P +   
Sbjct: 1062 DTLQSMSL------AGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHC 1115

Query: 193  NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            N L+    +    + A + Y EML  +   +  +  VL+ GLC   E R      +  A+
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCL--ERRVEEGLKLIEAR 1173

Query: 253  FGV--FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            +G    P++  YN LIDG+C+ G++   + L  EME     P + TY  LI  L   G L
Sbjct: 1174 WGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDL 1233

Query: 311  EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            E    L  +M K G   NV  YNS+ID  CK     +A+ +  QM   G +P+++TF++L
Sbjct: 1234 EKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTL 1293

Query: 371  IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
            I G C  G++  A     E + + L P+ + +T LI G    G +     L  EM+    
Sbjct: 1294 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1353

Query: 431  TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            TP V T  +LIHGL   G++S AL    + T++       P+  +Y  +I  LC    + 
Sbjct: 1354 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ----VFPDVNIYNVLISGLCKKRMLP 1409

Query: 491  KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
             A  +  +M   N++PD   Y T++ G +R++ + D   +   M   GI PD V    M+
Sbjct: 1410 AAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMI 1469

Query: 551  RGYQENGDLKSAFRCSEFLKE 571
            +GY + G +  A  C   +++
Sbjct: 1470 KGYCQFGMMSEAILCMSNMRK 1490



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 139/323 (43%), Gaps = 27/323 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V++TLI  F    ++ +A  ++  +E   + P I +CNA++ G  + G           M
Sbjct: 1429 VYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1488

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G + D  TY  +I     QG++  AL    +MI +  +P VV Y+ LI+G C     
Sbjct: 1489 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 1548

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              AE +F +M+   + PN+ TY  L+    K   V RA  ++  ML ++  PN VT   L
Sbjct: 1549 DFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 1608

Query: 231  MDGL------------CKVGELRAAGNFFVHMAKFGVF----PNIFVYNCLIDGHCKAGN 274
            ++GL            C   E+       V   K  VF    P    YN +I   C+   
Sbjct: 1609 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKL-VFDIGDPRNSAYNAIIFSLCRHNM 1667

Query: 275  LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            L EA+   + M K    P+  T+  L+ G C VG+      +L   +++     +  Y  
Sbjct: 1668 LREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKF 1727

Query: 335  LIDGYCKEGDMEKALSVCSQMTE 357
            L D Y  E       SVC +++ 
Sbjct: 1728 LFDQYATE-------SVCCEVSR 1743


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 255/517 (49%), Gaps = 11/517 (2%)

Query: 68  IEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           ++ AL  Y K+  +   P ++  N L   + K   + +     + M   G+  +V T+ +
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +I+C C     +   ++   M   G+EP++V +T +++GLC E  + +A      +++ G
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
              + YT  A+++G CKV   + AL +  +M   N   +V  +  ++DGLCK G +  A 
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           + F  M   G+ PN+F YNCLI G C      EA  L + M +  I PDV T+N++    
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G +  A+ +   M   GI  NVVTYNS+I  +C    M+ A+ V   M  KG  PN+
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT++SLI G C+  N++ AM    EMV   L PDVV ++ LI G  K G       L+  
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQA 482
           M +    P + T + ++ GLFK    S A++ F  LEK +         + ++Y+ I+  
Sbjct: 367 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNS------DLDIIIYSIILNG 420

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +C  G++  A +LFS + S  ++ D  TY  M+ GL +   + D   LL  M + G  PD
Sbjct: 421 MCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPD 480

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
                V V+G     ++  + +   F+K     ++ T
Sbjct: 481 ECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANAT 517



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 38/358 (10%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + +S ++    + G + EAL ++ ++    + P +   N L++GL    ++         
Sbjct: 167 TAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLAN 226

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G++ DV T+ V+       G + +A ++F  M   GIE  VV Y  +I   C  N+
Sbjct: 227 MMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQ 286

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M +A  +F  M   G +PN+ TYN+L+ G+C+  ++N+A+ F  EM+++ L P+VVT+  
Sbjct: 287 MKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWST 346

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPN------------------------------- 258
           L+ G CK G+  AA   F  M K G  P+                               
Sbjct: 347 LIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 406

Query: 259 ----IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
               I +Y+ +++G C +G L +A+ L S +    +  DV TYNI+I GLC  G L+ AE
Sbjct: 407 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 466

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            LL KM + G   +  TYN  + G  +  ++ K+      M  KG   N  T   LI+
Sbjct: 467 DLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 524



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 168/358 (46%), Gaps = 8/358 (2%)

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  V+ AL+FYH+M+     P V  F +L   + K+     A +   HM+  GV PN+  
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N +I+  C+  +     S+   M K  + P + T+  ++ GLC  G +  A   +  + 
Sbjct: 64  HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G  ++  T  ++I+G CK G    ALS   +M E+    +V  +S+++DG CK G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+++M  K + P++  +  LI GL      KE   L   M+   I P V T + + 
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNH--VLYAAIIQALCYDGQILKASKLFSDM 499
               K G IS A + F      +  G+    H  V Y +II A C   Q+  A ++F  M
Sbjct: 244 GRFLKTGMISRAKSIF------SFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLM 297

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
                 P+  TY +++ G    K M   M  L +M+  G+ PD V    ++ G+ + G
Sbjct: 298 IRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 8/209 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGH---IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
            +P V  +STLI  F + G     +E  +V  K   LP +Q C  +L+GL K        
Sbjct: 337 LDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAM 396

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + E+       D++ Y ++++  C  G +  AL LF  +  KG++  VV Y I+I+GL
Sbjct: 397 SLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGL 456

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E  + +AE +   M E G  P+  TYN  + G  +  +++++ ++   M     + N 
Sbjct: 457 CKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANA 516

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            T  +L++      E RA   F V + KF
Sbjct: 517 TTTKLLINYFSANKENRA---FQVFLQKF 542


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 263/515 (51%), Gaps = 9/515 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+A  + G++E+A+ W    +   +   + A  +L+ G  K     S  + + +M
Sbjct: 305 TYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM 364

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   + VT+ VLI+     G++ KAL  + +M   G+ P+V     +I G     K 
Sbjct: 365 ENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKH 424

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F    E G+  N++  N ++   CK   +++A E   +M    + PNVV++  +
Sbjct: 425 EEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNV 483

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M   C+   +  A   F +M + G+ PN + Y+ LIDG  K  +    + + ++M    I
Sbjct: 484 MLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNI 543

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKAL 349
             +   Y  +I GLC VGQ   A  LL  M +E     + ++YNS+IDG+ KEG+M+ A+
Sbjct: 544 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAV 603

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +   +M   G+ PNV+T++SL+DG CK   +D A+ +  EM  K +  D+  + ALI G 
Sbjct: 604 AAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGF 663

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K  NM+    L+ E+LE  + PS    +SLI G    G +  AL+ +  K    DG  C
Sbjct: 664 CKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLY--KKMLKDGLRC 721

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
                 Y  +I  L  +G ++ AS L+++M++  L PD   YT ++ GL +  + + V+ 
Sbjct: 722 DLG--TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVK 779

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +  +M K  + P+ +I   ++ G+   G+L  AFR
Sbjct: 780 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 814



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 232/457 (50%), Gaps = 40/457 (8%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           E P  N   FS LI  FS+ G +E+AL  Y+K+E L   P++   + ++ G +K  K + 
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             + ++E    GL A+V     ++   C QG + KA  L  +M  +GI P VV Y  ++ 
Sbjct: 427 ALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVML 485

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             C +  M  A ++F +M E G+ PN YTY+ L+DG  K  D    LE  ++M   N++ 
Sbjct: 486 AHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEV 545

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHM---AKF-------------------------- 253
           N V +  +++GLCKVG+   A     +M    +F                          
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAA 605

Query: 254 -------GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
                  G+ PN+  Y  L+DG CK   + +A+ +  EM+   +  D+  Y  LI G C 
Sbjct: 606 YEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCK 665

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
              +E A  L  ++ +EG+  +   YNSLI G+   G+M  AL +  +M + G+  ++ T
Sbjct: 666 KSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 725

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++LIDG  K GN+  A  LYTEM    LVPD +++T +++GLSK G   + +++++EM 
Sbjct: 726 YTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMK 785

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +  +TP+V   +++I G ++ G +  A     E  DK
Sbjct: 786 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 822



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 248/501 (49%), Gaps = 9/501 (1%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           ++LI    +   +  AL ++ K+E     P     + L+    K G+ +   EFY++M  
Sbjct: 342 TSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMES 401

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL   V     +I          +AL LFDE  + G+    +  TIL   LC + K+ +
Sbjct: 402 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTIL-SWLCKQGKIDK 460

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R M   G+ PN+ +YN +M  +C+  +++ A   +  ML   L+PN  T+ +L+D
Sbjct: 461 ATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILID 520

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEIS 291
           G  K  + +        M    +  N  VY  +I+G CK G   +A  L + M E+    
Sbjct: 521 GCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC 580

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
               +YN +I G    G+++ A    ++M   GI  NV+TY SL+DG CK   M++AL +
Sbjct: 581 VSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEM 640

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  KGV+ ++  + +LI G CK  N+++A  L++E++ + L P   V+ +LI G   
Sbjct: 641 RDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRN 700

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            GNM   L LYK+ML+  +   + T ++LI GL K G +  A + + E           P
Sbjct: 701 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTE----MQAVGLVP 756

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + ++Y  I+  L   GQ +K  K+F +M+ +N+ P+   Y  ++ G  R   + +   L 
Sbjct: 757 DEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 816

Query: 532 ADMIKMGIVPDAVINQVMVRG 552
            +M+  GI+PD     ++V G
Sbjct: 817 DEMLDKGILPDGATFDILVSG 837



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 168/631 (26%), Positives = 280/631 (44%), Gaps = 109/631 (17%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ L+ A+S+    + A+ +  +   + V+P +   N  L+ L+++       E Y
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  G+  D  T  +L+     +    +AL +F   I++G EP  ++Y++ +   C  
Sbjct: 221 SRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKT 280

Query: 168 NKMVEAESMFRSMRECGV-VPNLYTYNA-------------------------------- 194
             +  A S+ R M+E  + VP+  TY +                                
Sbjct: 281 LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVA 340

Query: 195 ---LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
              L+ G+CK  D+  AL+ +++M +    PN VTF VL++   K GE+  A  F+  M 
Sbjct: 341 ATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKME 400

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILIKGLCGVGQL 310
             G+ P++F  + +I G  K     EA+ L    E FE    +VF  N ++  LC  G++
Sbjct: 401 SLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD--ESFETGLANVFICNTILSWLCKQGKI 458

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  LL+KM   GI  NVV+YN+++  +C++ +M+ A +V S M EKG++PN  T+S L
Sbjct: 459 DKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSIL 518

Query: 371 ID-----------------------------------GQCKAGNIDAAMGLYTEMV-IKS 394
           ID                                   G CK G    A  L   M+  K 
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 578

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
                + + ++IDG  K+G M   +  Y+EM    I+P+V T +SL+ GL KN R+  AL
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQAL 638

Query: 455 NFFLEKTDKTDG-----------GYC--------------------SPNHVLYAAIIQAL 483
               E  +K              G+C                    +P+  +Y ++I   
Sbjct: 639 EMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF 698

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              G ++ A  L+  M  D LR D  TYTT++ GLL+   ++    L  +M  +G+VPD 
Sbjct: 699 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDE 758

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           ++  V+V G  + G      +  E +K++ +
Sbjct: 759 IMYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 789



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 221/430 (51%), Gaps = 7/430 (1%)

Query: 18  IKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
           +  + +  LK +K H     +F+   S E    N  + +T++    + G I++A  + RK
Sbjct: 411 VHTIIQGWLKGQK-HEEALKLFD--ESFETGLANVFICNTILSWLCKQGKIDKATELLRK 467

Query: 78  IE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +E   + P + + N ++    +K   D     +  M+  GL  +  TY +LID C    D
Sbjct: 468 MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHD 527

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYN 193
               L + ++M    IE   V+Y  +I+GLC   +  +A  +  +M  E     +  +YN
Sbjct: 528 EQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYN 587

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           +++DG+ K  +++ A+  Y EM  + + PNV+T+  LMDGLCK   +  A      M   
Sbjct: 588 SIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK 647

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV  +I  Y  LI G CK  N+  A +L SE+ +  ++P    YN LI G   +G +  A
Sbjct: 648 GVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAA 707

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L +KM K+G+  ++ TY +LIDG  KEG++  A  + ++M   G+ P+ + ++ +++G
Sbjct: 708 LDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNG 767

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K G     + ++ EM   ++ P+V+++ A+I G  ++GN+ E  RL+ EML+  I P 
Sbjct: 768 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 827

Query: 434 VFTVSSLIHG 443
             T   L+ G
Sbjct: 828 GATFDILVSG 837



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 153/290 (52%), Gaps = 7/290 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFY----EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
            ++NGL K G+     E      EE   C      ++Y  +ID    +G++  A+  ++E
Sbjct: 552 TIINGLCKVGQTSKARELLANMIEEKRFC---VSCMSYNSIIDGFIKEGEMDYAVAAYEE 608

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M   GI P V+ YT L+ GLC  N+M +A  M   M+  GV  ++  Y AL+ G+CK ++
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSN 668

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +  A   + E+L   L P+   +  L+ G   +G + AA + +  M K G+  ++  Y  
Sbjct: 669 MESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 728

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG  K GNL  A  L +EM+   + PD   Y +++ GL   GQ      + ++M K  
Sbjct: 729 LIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNN 788

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           +  NV+ YN++I G+ +EG++++A  +  +M +KG+ P+  TF  L+ G+
Sbjct: 789 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGK 838



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 182/414 (43%), Gaps = 6/414 (1%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           NL D     G E     +  L++    + +   A  +   M E GV+P +   N  +   
Sbjct: 148 NLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSAL 207

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            +   +  A E Y  M+   +  +  T  +LM    +  +   A   F    + G  P+ 
Sbjct: 208 VQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDS 267

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            +Y+  +   CK  NL  A SL  EM EK    P   TY  +I      G +E A     
Sbjct: 268 LLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKD 327

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M  +GI  NVV   SLI G+CK  D+  AL +  +M  +G  PN VTFS LI+   K G
Sbjct: 328 EMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNG 387

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ++ A+  Y +M    L P V     +I G  K    +E L+L+ E  E  +  +VF  +
Sbjct: 388 EMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICN 446

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +++  L K G+I  A     +   +  G    PN V Y  ++ A C    +  A  +FS+
Sbjct: 447 TILSWLCKQGKIDKATELLRKMESRGIG----PNVVSYNNVMLAHCRKKNMDLARTVFSN 502

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           M    L+P+N TY+ ++ G  +     +V+ ++  M    I  + V+ Q ++ G
Sbjct: 503 MLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIING 556



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 166/349 (47%), Gaps = 56/349 (16%)

Query: 17  LIKDVTENLL-KSRKPHHVCYSVF--------NALNSLEIP--------KFNPSVFSTLI 59
           L + V  N+L K  KP++  YS+         +  N LE+         + N  V+ T+I
Sbjct: 495 LARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTII 554

Query: 60  IAFSEMGHIEEALWVYRK-IEVLPAIQAC---NALLNGLIKKGKFDSVWEFYEEMVLCGL 115
               ++G   +A  +    IE      +C   N++++G IK+G+ D     YEEM   G+
Sbjct: 555 NGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGI 614

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
             +V+TY  L+D  C    + +AL + DEM +KG++  +  Y  LIHG C ++ M  A +
Sbjct: 615 SPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASA 674

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  + E G+ P+   YN+L+ G+  + ++  AL+ Y +ML   L+ ++ T+  L+DGL 
Sbjct: 675 LFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 734

Query: 236 KVG----------ELRAAG-------------------------NFFVHMAKFGVFPNIF 260
           K G          E++A G                           F  M K  V PN+ 
Sbjct: 735 KEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 794

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +YN +I GH + GNL EA  L  EM    I PD  T++IL+ G  G  Q
Sbjct: 795 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQ 843



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 7/276 (2%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   N   +N L++ Y K+   + A+ + +QM E GV P V   +  +    +  +I  A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             LY+ MV   +  D      L+    ++    E L ++   +E    P     S  +  
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             K   ++ A +   E  +K     C P+   Y ++I A    G +  A +   +M SD 
Sbjct: 277 CCKTLNLAMANSLLREMKEKK---LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDG 333

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +  +    T+++ G  +   +   + L   M   G  P++V   V++  + +NG+++ A 
Sbjct: 334 ISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKAL 393

Query: 564 RCSEFLKE-SRIGSSETEGHTTRSFLGHLKPTVYKE 598
              EF K+   +G + +  H      G LK   ++E
Sbjct: 394 ---EFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI    + G++  A  +Y +++   ++P       ++NGL KKG+F  V + +EEM
Sbjct: 725 TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEM 784

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  +V+ Y  +I     +G++ +A  L DEM+DKGI P    + IL+ G   + + 
Sbjct: 785 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQP 844

Query: 171 VEAESM 176
           + A S+
Sbjct: 845 IRAASL 850


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 241/512 (47%), Gaps = 44/512 (8%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+++ CN +L  L      +     YE M+  G++  V+T+  ++D C   GD+ +   
Sbjct: 237 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 296

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           ++ EM  + IE + V Y ILI+G     KM EA      MR  G     Y++N L++GYC
Sbjct: 297 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 356

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K    + A     EML+  + P   T+ + +  LC  G +  A      MA     P++ 
Sbjct: 357 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 412

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G+ K G   EA  L  ++   +I P + TYN LI GLC  G LEGA+ L ++M
Sbjct: 413 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 472

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             + I  +V+TY +L+ G+ K G++  A  V  +M  KG++P+   +++   G+ + G+ 
Sbjct: 473 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 532

Query: 381 DAAMGLYTEMVIKS------------------------------------LVPDVVVFTA 404
           D A  L+ EMV                                       LVPD V +T 
Sbjct: 533 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 592

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I G  ++G  K    LY EML  ++ PSV T   LI+G  K GR+  A  +  E   + 
Sbjct: 593 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 652

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN + + A++  +C  G I +A +    M  + + P+  +YT ++      ++ 
Sbjct: 653 ----VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 708

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +V+ L  +M+   I PD   ++ + +  +++
Sbjct: 709 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 253/513 (49%), Gaps = 21/513 (4%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL--VADVVTYGVLID--- 127
           W+ R+ +V  + QA  A+L  L +       +   E  +  G+  + D++  G       
Sbjct: 145 WIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIA 204

Query: 128 ---------CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                        +    K L  F++MI KG  P+V    I++  L +   M +A +++ 
Sbjct: 205 LKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYE 264

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           +M E G++P + T+N ++D   K  D+ R  + + EM   N++ + VT+ +L++G  K G
Sbjct: 265 TMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG 324

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           ++  A  F   M + G     + +N LI+G+CK G   +A  +  EM    I P   TYN
Sbjct: 325 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 384

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           I I  LC  G+++ A  LL  M       +VV+YN+L+ GY K G   +A  +   +   
Sbjct: 385 IYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 440

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            + P++VT+++LIDG C++GN++ A  L  EM  + + PDV+ +T L+ G  K+GN+   
Sbjct: 441 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 500

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             +Y EML   I P  +  ++   G  + G    A     E+   TD  + +P+  +Y  
Sbjct: 501 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH-EEMVATD--HHAPDLTIYNV 557

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            I  LC  G ++KA +    +    L PD+ TYTT++RG L   +      L  +M++  
Sbjct: 558 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 617

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + P  +   V++ G+ + G L+ AF+ S  +K+
Sbjct: 618 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK 650



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 240/522 (45%), Gaps = 47/522 (9%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV------------ 154
           +E+M+  G +  V    +++        + KA  +++ MI+ GI PTV            
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 155 -----------------------VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                                  V Y ILI+G     KM EA      MR  G     Y+
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++GYCK    + A     EML+  + P   T+ + +  LC  G +  A      MA
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                P++  YN L+ G+ K G   EA  L  ++   +I P + TYN LI GLC  G LE
Sbjct: 408 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 463

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           GA+ L ++M  + I  +V+TY +L+ G+ K G++  A  V  +M  KG++P+   +++  
Sbjct: 464 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 523

Query: 372 DGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
            G+ + G+ D A  L+ EMV      PD+ ++   IDGL K GN+ + +   +++    +
Sbjct: 524 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 583

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P   T +++I G  +NG+   A N + E   K       P+ + Y  +I      G++ 
Sbjct: 584 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR----LYPSVITYFVLIYGHAKAGRLE 639

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +  ++M+   +RP+  T+  +L G+ +A  + +    L  M + GI P+     +++
Sbjct: 640 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
               +N D +      +  KE      E +G+T R+   HL+
Sbjct: 700 ---SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 738



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 200/397 (50%), Gaps = 8/397 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +F+   ++ LI  FS+ G +EEA   +   R+        + N L+ G  K+G FD  W 
Sbjct: 307 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 366

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G+     TY + I   C  G +  A  L   M      P VV Y  L+HG  
Sbjct: 367 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYI 422

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              K VEA  +F  +R   + P++ TYN L+DG C+  ++  A     EM    + P+V+
Sbjct: 423 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 482

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G  K G L  A   +  M + G+ P+ + Y     G  + G+  +A  L  EM
Sbjct: 483 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 542

Query: 286 EKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
              +  +PD+  YN+ I GLC VG L  A    +K+++ G++ + VTY ++I GY + G 
Sbjct: 543 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 602

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A ++  +M  K + P+V+T+  LI G  KAG ++ A    TEM  + + P+V+   A
Sbjct: 603 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 662

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           L+ G+ K GN+ E  R   +M E  I P+ ++ + LI
Sbjct: 663 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 3/190 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           ++++  I    ++G++ +A+   RKI    ++P       ++ G ++ G+F      Y+E
Sbjct: 553 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 612

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+   L   V+TY VLI      G + +A     EM  +G+ P V+ +  L++G+C    
Sbjct: 613 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 672

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA      M E G+ PN Y+Y  L+   C        ++ Y EML   ++P+  T   
Sbjct: 673 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 732

Query: 230 LMDGLCKVGE 239
           L   L K  E
Sbjct: 733 LFKHLEKDHE 742



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 19/164 (11%)

Query: 31  PHHVCYSVF--------------NALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWV 74
           P HV Y+                N  + +   +  PSV +   LI   ++ G +E+A   
Sbjct: 585 PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 644

Query: 75  ---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
               +K  V P +   NALL G+ K G  D  + +  +M   G+  +  +Y +LI   C 
Sbjct: 645 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCD 704

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
                + + L+ EM+DK IEP    +  L   L  +++ +  +S
Sbjct: 705 FEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESMALDS 748


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 261/527 (49%), Gaps = 33/527 (6%)

Query: 68  IEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           ++EAL      RK   LP    CN  ++ LI         +F   +V  G      ++  
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC- 183
           ++   C  G V  A+++   M   G EP V+ Y  LI G C    +  A  +  S+R   
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 184 --GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
                P++ ++N L +G+ K+  ++    +   ML     PNVVT+   +D  CK GEL+
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELK 180

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F  M +  +FPN+  + CLIDG+CKAG+L   +SL  EM +  +S +V TY  LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C  G+++ A G+  +M ++ +  N + Y ++I+G+ + GD + A+   ++M  +G+ 
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            ++  +  +I G C  G +  A  +  +M    LVPD+++FT +++   K G MK  + +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-LEKTD------------------ 462
           Y +++E    P V  +S++I G+ KNG++  A+++F  EK +                  
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFI 420

Query: 463 -------KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                  K       P+  +Y + I  LC  G ++ A KL + M  + L  D   YTT++
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLI 480

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            GL     M++   +  +M++ G+ PD+ +  +++R Y++ G++ +A
Sbjct: 481 YGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTA 527



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 233/448 (52%), Gaps = 27/448 (6%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+  CG      +L     ++ +G  P    +  ++  +C   ++  A  +  SM   G
Sbjct: 31  LINSNCGA----LSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFG 86

Query: 185 VVPNLYTYNALMDGYCKVADVNRA---LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             P++ +YN+L+DG+C+  D+  A   LE          +P++V+F  L +G  K   ++
Sbjct: 87  CEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSK---MK 143

Query: 242 AAGNFFVHMAKFGVF-----PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                FV+M   GV      PN+  Y+  ID  CK+G L  A+   + M++  + P+V T
Sbjct: 144 MLDEVFVYM---GVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVT 200

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +  LI G C  G LE    L ++M +  +  NVVTY +LIDG+CK+G+M++A  +  +M 
Sbjct: 201 FTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRML 260

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E  VEPN + ++++I+G  + G+ D AM    +M+ + +  D+  +  +I GL   G +K
Sbjct: 261 EDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLK 320

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   + ++M +  + P +   +++++  FK+GR+  A+N + +  ++   G+  P+ V  
Sbjct: 321 EATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIER---GF-EPDVVAL 376

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           + +I  +  +GQ+ +A   F   +++++      YT ++  L + +  ++V  L + + +
Sbjct: 377 STMIDGIAKNGQLHEAISYFCTEKANDV-----MYTVLIDALCKEEDFIEVERLFSKISE 431

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFR 564
            G+VPD  +    + G  + G+L  AF+
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFK 459



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 205/453 (45%), Gaps = 41/453 (9%)

Query: 47  IPKF--NPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIK 96
           +P+F   P V S  +LI      G I  A  V   +         P I + N L NG  K
Sbjct: 82  MPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSK 141

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
               D V+ +   M+ C    +VVTY   ID  C  G++  AL  F+ M    + P VV 
Sbjct: 142 MKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVT 200

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +T LI G C    +    S++  MR   +  N+ TY AL+DG+CK  ++ RA   Y  ML
Sbjct: 201 FTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRML 260

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              ++PN + +  +++G  + G+   A  F   M   G+  +I  Y  +I G C  G L 
Sbjct: 261 EDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLK 320

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI----------- 325
           EA  +  +MEK ++ PD+  +  ++      G+++ A  +  K+ + G            
Sbjct: 321 EATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

Query: 326 -------------------LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
                               AN V Y  LID  CKE D  +   + S+++E G+ P+   
Sbjct: 381 DGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFM 440

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++S I G CK GN+  A  L T+MV + L  D+  +T LI GL+  G M E  +++ EML
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEML 500

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
            + + P       LI    K G ++ A +  L+
Sbjct: 501 RSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLD 533



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 187/379 (49%), Gaps = 10/379 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +ST I  F + G ++ AL  +   ++  + P +     L++G  K G  + V   Y
Sbjct: 162 NVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLY 221

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM    +  +VVTY  LID  C +G++ +A  ++  M++  +EP  ++YT +I+G    
Sbjct: 222 EEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQR 281

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
                A      M   G+  ++  Y  ++ G C +  +  A E   +M   +L P+++ F
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIF 341

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-LCSEME 286
             +M+   K G ++AA N +  + + G  P++   + +IDG  K G L EA+S  C+E  
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEK- 400

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               + DV  Y +LI  LC        E L  K+ + G++ +   Y S I G CK+G++ 
Sbjct: 401 ----ANDVM-YTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  + ++M ++G+E ++  +++LI G    G +  A  ++ EM+   + PD  VF  LI
Sbjct: 456 DAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLI 515

Query: 407 DGLSKDGNMKETLRLYKEM 425
               K+GNM     L  +M
Sbjct: 516 RAYEKEGNMTTASDLLLDM 534



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 116/310 (37%), Gaps = 96/310 (30%)

Query: 277 EAMSLCSEMEKFEISPDVFTYN----ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           EA+   S + K    PD  T N     LI   CG   L+     L  +   G   +  ++
Sbjct: 4   EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLK----FLAYLVSRGYAPHRSSF 59

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           NS++   CK G ++ A+ +   M   G EP+V++++SLIDG C+ G+I +A      +V+
Sbjct: 60  NSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAC-----LVL 114

Query: 393 KSLV--------PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           +SL         PD+V F  L +G SK   + E       ML+                 
Sbjct: 115 ESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC---------------- 158

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
                                   CSPN V Y+  I   C  G++  A K F+ M+ D L
Sbjct: 159 ------------------------CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDAL 194

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P+  T+T                                    ++ GY + GDL+    
Sbjct: 195 FPNVVTFT-----------------------------------CLIDGYCKAGDLEVVVS 219

Query: 565 CSEFLKESRI 574
             E ++  R+
Sbjct: 220 LYEEMRRVRM 229


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/500 (31%), Positives = 251/500 (50%), Gaps = 5/500 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP  +    L   ++K   + +     +     G+  DV T  ++I+C C     +   +
Sbjct: 4   LPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFS 63

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +   M   G+EPTVV +  LI+GLC E  +  A     S+ + G   N YT+  +++G C
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 201 KVADVNRALEFYHEMLHHNLQPN-VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           KV D   A+ +  ++   N   + ++ +  +MD LCK G L  A NFF  M   G+ P++
Sbjct: 124 KVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDL 183

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LI G C  G   EA +L   M +  I P+V T+N+L+   C  G++  A+ ++  
Sbjct: 184 VAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCF 243

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G+  +VVTYNS+I G+C    M  A+ V   M  KG+ PNVVT+SSLI G CK  N
Sbjct: 244 MVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRN 303

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I+ A+ +  EMV   L  DVV ++ LI G  K G  +  + L+  M E    P++ T + 
Sbjct: 304 INKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAI 363

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           ++ GLFK    S A++ F  K +K +      N V Y  ++  +C  G+   A +LFS +
Sbjct: 364 ILDGLFKCQFHSEAISLF-RKMEKMN---LELNIVTYNIVLDGMCSFGKFNDARELFSCL 419

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            S  ++ D   YTTM++GL +   + D   LL  M + G  P+     V+VRG  +  D+
Sbjct: 420 PSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDI 479

Query: 560 KSAFRCSEFLKESRIGSSET 579
             + +    +K   + +  T
Sbjct: 480 SRSTKYLMLMKGKGLSADAT 499



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 232/477 (48%), Gaps = 21/477 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV------ 54
           +F V+   K Y  A  LIK      L  +   H    V N L  L+   F  SV      
Sbjct: 13  LFGVIVKMKHYATAISLIKHTYS--LGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFK 70

Query: 55  ---------FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
                    F+TLI      G++  A      +E +           ++NGL K G    
Sbjct: 71  IGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAG 130

Query: 103 VWEFYEEMVLCGLVADV-VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + E++       D+ + Y  ++D  C  G +  ALN F  M  KGI+P +V Y  LI
Sbjct: 131 AISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLI 190

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           HGLC+  +  EA ++  +M   G++PN+ T+N L+D +CK   ++RA      M+H  ++
Sbjct: 191 HGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVE 250

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+VVT+  ++ G C + ++  A   F  M   G+ PN+  Y+ LI G CK  N+ +A+ +
Sbjct: 251 PDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFV 310

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    ++ DV T++ LI G C  G+ E A  L   M++   L N+ T   ++DG  K
Sbjct: 311 LDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFK 370

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
                +A+S+  +M +  +E N+VT++ ++DG C  G  + A  L++ +  K +  DVV 
Sbjct: 371 CQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVA 430

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +T +I GL K+G + +   L  +M E    P+ FT + L+ GL +   IS +  + +
Sbjct: 431 YTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLM 487



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 177/333 (53%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P + A N+L++GL   G+++        M+  G++ +V T+ VL+D  C +G + +A 
Sbjct: 179 IQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAK 238

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +   M+  G+EP VV Y  +I G C  ++M +A  +F  M   G++PN+ TY++L+ G+
Sbjct: 239 TIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGW 298

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK  ++N+A+    EM+++ L  +VVT+  L+ G CK G   AA   F  M +    PN+
Sbjct: 299 CKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNL 358

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
                ++DG  K     EA+SL  +MEK  +  ++ TYNI++ G+C  G+   A  L   
Sbjct: 359 QTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSC 418

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +  +GI  +VV Y ++I G CKEG ++ A  +  +M E G  PN  T++ L+ G  +  +
Sbjct: 419 LPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYD 478

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           I  +      M  K L  D      LI   S +
Sbjct: 479 ISRSTKYLMLMKGKGLSADATTTELLISYFSAN 511


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 246/481 (51%), Gaps = 16/481 (3%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVE 172
           V D V+Y  ++   C +G   +A  L   M         P  V YT+L+  LC +    +
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + RSMR  GV  ++ TY  L+ G C  A+V++A+E   EM    ++PNVV +  L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK G     G  FV M++ G+ P++ +Y  LID  CK G   +A  +   M +  + P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TYN+LI  +C  G ++ A G+L+KM ++G+  +VVTYN+LI G     +M++A+ + 
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 353 SQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +M      V+PNVVTF+S+I G C  G +  A  +   M     + ++V +  LI GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +++ + L  EM    + P  FT S LI G  K  ++  A +      D+       
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG----IE 429

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P    Y  ++ A+C  G + +A  LF++M  +N   D   Y+TM+ G  +A  +     L
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA------FRCSEFLKESRIGSSETEGHTT 584
           L  ++  G+ PDAV   +++  + ++GD+++A         S FL +  +  S  +G++T
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 585 R 585
           +
Sbjct: 549 K 549



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 249/509 (48%), Gaps = 16/509 (3%)

Query: 47  IPKFNPSV-FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA-------LLNGLIKKG 98
           +P    +V ++T++ A    GH + A  + R + + P   AC         L+  L    
Sbjct: 71  LPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH-PACRPNAVSYTVLMRALCADR 129

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
             D        M   G+ ADVVTYG LI   C   +V KA+ L  EM + GIEP VV+Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            L+ G C   +  +   +F  M E G+ P++  Y  L+D  CKV    +A      M+  
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+PNVVT+ VL++ +CK G ++ A      M++ GV P++  YN LI G      + EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 279 MSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           M L  EM + +  + P+V T+N +I+GLC +G++  A  +   M + G + N+VTYN LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G  +   + KA+ +  +MT  G+EP+  T+S LI G CK   +D A  L + M  + + 
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P++  +  L+  + + G M+    L+ EM +      V   S++IHG  K G +  A   
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D+      +P+ V Y+ +I      G +  A+ +   M +    PD   + ++++
Sbjct: 489 LKSIVDEG----LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           G      +  V+ L+ +MI   I  D+ I
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKI 573



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 246/502 (49%), Gaps = 16/502 (3%)

Query: 78  IEVLPAIQ---ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA---DVVTYGVLIDCCCG 131
           ++ LP+++   + N +L  L ++G  D        M L    A   + V+Y VL+   C 
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                +A+ L   M   G+   VV Y  LI GLC+  ++ +A  +   M E G+ PN+  
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y++L+ GYCK        + + EM    ++P+VV +  L+D LCKVG+ + A      M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G+ PN+  YN LI+  CK G++ EA+ +  +M +  ++PDV TYN LIKGL  V +++
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 312 GAEGLLQKMY--KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            A  LL++M   K  +  NVVT+NS+I G C  G M +A  V + M E G   N+VT++ 
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G  +   +  AM L  EM    L PD   ++ LI G  K   +     L   M +  
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P +F    L+  + + G +  A N F    ++ D  +   + V Y+ +I   C  G +
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLF----NEMDNNF-PLDVVAYSTMIHGACKAGDL 482

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L   +  + L PD  TY+ ++    ++  M     +L  M   G +PD  +   +
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 550 VRGYQENGDLKSAFRCSEFLKE 571
           ++GY   G++       E ++E
Sbjct: 543 IQGYSTKGEINKVL---ELIRE 561



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 239/485 (49%), Gaps = 43/485 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + TLI    +   +++A+ +  ++    + P +   ++LL G  K G+++ V + + EM
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DVV Y  LID  C  G   KA  + D M+ +G+EP VV Y +LI+ +C E  +
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSV 271

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFG 228
            EA  + + M E GV P++ TYN L+ G   V +++ A+    EM+     ++PNVVTF 
Sbjct: 272 KEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFN 331

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++ GLC +G +R A      M + G   N+  YN LI G  +   + +AM L  EM   
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA--------------------- 327
            + PD FTY+ILIKG C + Q++ AE LL  M   GI                       
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451

Query: 328 -------------NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
                        +VV Y+++I G CK GD++ A  +   + ++G+ P+ VT+S +I+  
Sbjct: 452 RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            K+G+++AA G+  +M     +PDV VF +LI G S  G + + L L +EM+   I    
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571

Query: 435 FTVSSLIHGLFKNGRISNALNFFLE-KTDKTDGGYCSPNH---VLYAAIIQALCYDGQIL 490
             +S+L   L  +      L    +   + + G   SP     VL+ AI      + Q+ 
Sbjct: 572 KIISTLSTSLVASNEGKALLQSLPDFSAEISKGNINSPQELMKVLHNAISFKAPSNQQLH 631

Query: 491 KASKL 495
           K +KL
Sbjct: 632 KRAKL 636


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 249/496 (50%), Gaps = 8/496 (1%)

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           F  +  +++A  ++R++   + LP++ + + LL  ++    + SV   + E+    +   
Sbjct: 47  FQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVH 106

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                ++++ CC         ++      KGI    V +T LI GL  ENK+ +A  +F+
Sbjct: 107 EFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFK 166

Query: 179 SM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            + RE    PN   Y  +M+G CK     +A +    M   + +PN  T+ +++D  CK 
Sbjct: 167 KLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKD 226

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A +    M +  + P+IF Y+ LID  CK        +L  EM    I P+V T+
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N +I GLC  G++E AE +++ M ++G+  +V+TYN +IDGY   G +++A  +   M  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K +EP++++++ LI+G  +   ID AM +  E+  K L P +V    L+ GL + G  K 
Sbjct: 347 KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKS 406

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
               + EML A   P ++T  +L+ G FKNG +  A++ F +   + +      N  +Y 
Sbjct: 407 AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE----DTNIQIYT 462

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC +G++ KA   F  +    L PD  TYT M+ G  +   + +   +L  M   
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522

Query: 538 GIVPDAVINQVMVRGY 553
           G + D     V+VRG+
Sbjct: 523 GCLADNRTYNVIVRGF 538



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 218/423 (51%), Gaps = 7/423 (1%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFD 101
           IP +N   F+TLI        +++A+ +++K+ V   I   N      ++NGL KKG   
Sbjct: 138 IP-YNEVTFTTLIRGLFAENKVKDAVHLFKKL-VRENICEPNEVMYGTVMNGLCKKGHTQ 195

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             ++    M       +  TY ++ID  C  G +  A +L +EM  K I P +  Y+ LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC  ++     ++F  M    + PN+ T+N+++DG CK   V  A E    M+   + 
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+T+ +++DG    G++  A   F  M    + P+I  YN LI+G+ +   + EAM +
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           C E+ +  + P + T N+L+ GL  +G+ + A+    +M   G + ++ T+ +L+ GY K
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A+S   ++  +  + N+  ++++IDG CK G +D A   + ++ +  L PDV+ 
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +TA+I G  ++G + E   + ++M +        T + ++ G  ++ ++S    F  E  
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA 555

Query: 462 DKT 464
            K+
Sbjct: 556 GKS 558



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 201/378 (53%), Gaps = 3/378 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ +I AF + G ++ A  +  +++   + P I   + L++ L K  ++++V  
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM+   +  +V T+  +ID  C +G V  A  +   MI+KG++P V+ Y ++I G  
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++  A  +F SM    + P++ +YN L++GY +   ++ A++   E+    L+P++V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  VL+ GL ++G  ++A NFF  M   G  P+++ +  L+ G+ K G + EAMS   ++
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+     ++  Y  +I GLC  G+L+ A    +K+   G+  +V+TY ++I GYC+EG +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M + G   +  T++ ++ G  ++  +        E+  KS   +      L
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 406 IDGLSKDGNMKETLRLYK 423
           +D +++D ++   +   K
Sbjct: 570 MDIIAEDPSITRKMHWIK 587



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 203/422 (48%), Gaps = 3/422 (0%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +F  L    I + N  ++ T++    + GH ++A  + R +E     P  +    +++  
Sbjct: 164 LFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAF 223

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K G  D       EM    +  D+ TY  LID  C          LF EMI   I P V
Sbjct: 224 CKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNV 283

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             +  +I GLC E K+ +AE + R M E GV P++ TYN ++DGY     V+RA E +  
Sbjct: 284 CTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDS 343

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M++ +++P+++++ +L++G  +  ++  A      +++ G+ P+I   N L+ G  + G 
Sbjct: 344 MINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGR 403

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A +   EM      PD++T+  L+ G    G +E A     K+ +     N+  Y +
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +IDG CK G ++KA +   ++   G+ P+V+T++++I G C+ G +D A  +  +M    
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            + D   +  ++ G  +   + E     +E+     +    TV  L+  + ++  I+  +
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKM 583

Query: 455 NF 456
           ++
Sbjct: 584 HW 585



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 179/362 (49%), Gaps = 11/362 (3%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++ A   + +M+     P+V +F  L+  +  +    +  + F  + K  +  + F+ + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +++  C         S+ +   K  I  +  T+  LI+GL    +++ A  L +K+ +E 
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 325 IL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           I   N V Y ++++G CK+G  +KA  +   M +   +PN  T++ +ID  CK G +D A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L  EM  KS+ PD+  ++ LID L K    +    L+ EM+   I P+V T +S+I G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 444 LFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           L K G++ +A   + + +EK          P+ + Y  II      GQ+ +A ++F  M 
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKG-------VDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           + ++ PD  +Y  ++ G  R K++ + M +  ++ + G+ P  V   V++ G  E G  K
Sbjct: 346 NKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405

Query: 561 SA 562
           SA
Sbjct: 406 SA 407



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 197/418 (47%), Gaps = 15/418 (3%)

Query: 163 GLCNENKMV----EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           G+ NE + V    +A S+FR M     +P++ +++ L+     +   +  +  + E+  H
Sbjct: 42  GVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI--H 99

Query: 219 NLQPNVVTF--GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            L+  V  F   ++++  C +       +      K G+  N   +  LI G      + 
Sbjct: 100 KLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVK 159

Query: 277 EAMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           +A+ L  ++ +  I  P+   Y  ++ GLC  G  + A  LL+ M +     N  TY  +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID +CK+G ++ A S+ ++M +K + P++ T+S+LID  CK    +    L+ EM+  ++
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+V  F ++IDGL K+G +++   + + M+E  + P V T + +I G    G++  A  
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRARE 339

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    +K+      P+ + Y  +I       +I +A ++  ++    L+P   T   +L
Sbjct: 340 IFDSMINKS----IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            GL    R         +M+  G +PD   +  ++ GY +NG ++ A   S F K  R
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM--SHFHKLER 451



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 15/295 (5%)

Query: 288 FEISPDVFTYN---ILIKGLCGVGQ-------LEGAEGLLQKMYKEGILANVVTYNSLID 337
           + I+P  ++ N   I +KG  GV         L+ A  L ++M +   L +V +++ L+ 
Sbjct: 21  YSIAPRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLK 80

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
                      +S+  ++ +  +  +    S +++  C     D    +      K +  
Sbjct: 81  AMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPY 140

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNF 456
           + V FT LI GL  +  +K+ + L+K+++   I  P+     ++++GL K G    A + 
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                   + G   PN   Y  +I A C DG +  A+ L ++M+  ++ PD  TY+T++ 
Sbjct: 201 L----RLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            L +  +  +V  L  +MI + I P+      ++ G  + G ++ A     ++ E
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 236/483 (48%), Gaps = 9/483 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P  ++ N +L  L+           + +M+  G+   V T+GV++   C   +V  A +L
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G  P  +IY +LIH L   N++ EA  +   M   G  P++ T+N ++ G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A + +  ML  +   + +  G LM GLC++G++  A      +      PN  +
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVL 338

Query: 262 YNCLIDGHCKAGNLFEAMSLC-SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           YN LI+G+  +G   EA  L    M      PD FT+NI+I GLC  G L  A   L +M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K+G   NV+TY  LIDG+CK+G  E+A  V + M+ KG+  N V ++ LI   CK G I
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ +Y EM  K   PD+  F +LI GL K+  M+E L LY++ML   +  +  T ++L
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH   +   I  A     E   +     C  +++ Y  +I+ALC  G   K   L   M 
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRG----CPLDNITYNGLIKALCKTGATEKCLGLIEQMF 574

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            + + P   +   ++    R  ++ D +  L DMI+ G+ PD V    ++ G  + G  +
Sbjct: 575 GEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQ 634

Query: 561 SAF 563
            A 
Sbjct: 635 EAL 637



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 201/403 (49%), Gaps = 4/403 (0%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF-YEEMVLCGLV 116
           L+     MG ++EA  +  KI   P     N L+NG +  G+F+   +  Y+ MV+ G  
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN-PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D  T+ ++ID  C +G ++ AL   DEM+ KG EP V+ YTILI G C +    EA  +
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             SM   G+  N   YN L+   CK   +  AL+ Y EM     +P++ TF  L+ GLCK
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP-DVF 295
             ++  A   +  M   GV  N   YN LI    +   + +A  L  EM +F   P D  
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNI 548

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN LIK LC  G  E   GL+++M+ E I  ++ + N LI+ +C+ G +  AL     M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++G+ P++VT++SLI+G CK G    A+ L+  +  K + PD V +  LI     +G  
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            +  +L  + +     P+  T S LI+   KN   S      +
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILM 711



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 234/520 (45%), Gaps = 44/520 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +     ++       + DS      +M   G V + + Y +LI        V +A+
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAM 255

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L +EM   G EP V  +  +IHGLC   ++ EA  +   M       +      LM G 
Sbjct: 256 KLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGL 315

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN-FFVHMAKFGVFPN 258
           C++  V+ A      ML     PN V +  L++G    G    A +  + +M   G  P+
Sbjct: 316 CRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            F +N +IDG CK G L  A+    EM K    P+V TY ILI G C  G  E A  ++ 
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G+  N V YN LI   CK+G ++ AL +  +M+ KG +P++ TF+SLI G CK  
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491

Query: 379 NIDAAMGLYTEMVIKSLVP-----------------------------------DVVVFT 403
            ++ A+GLY +M+++ ++                                    D + + 
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYN 551

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI  L K G  ++ L L ++M   +I PS+ + + LI+   + G++++AL F  +   +
Sbjct: 552 GLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQR 611

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                 +P+ V Y ++I  LC  G+  +A  LF+ +++  + PD  TY T++        
Sbjct: 612 G----LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             D   LL   +  G +P+ +   +++  + +N      F
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 214/422 (50%), Gaps = 10/422 (2%)

Query: 8   AKLYKNARCLIKDVTEN-LLKSRKPHHVCY--SVFNALNSL-EIPKFNPSVFSTLIIAFS 63
           AKL+   R L++D T + L++    H +C    V  A   L +IP  N  +++TLI  + 
Sbjct: 290 AKLHD--RMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYV 347

Query: 64  EMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
             G  EEA  +  K  V+    P     N +++GL KKG   S  EF +EMV  G   +V
Sbjct: 348 VSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           +TY +LID  C QG   +A  + + M  KG+    V Y  LI  LC + K+ +A  M+  
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G  P++YT+N+L+ G CK   +  AL  Y +ML   +  N VT+  L+    ++  
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           ++ A      M   G   +   YN LI   CK G   + + L  +M   EI P + + NI
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI   C  G++  A   L+ M + G+  ++VTYNSLI+G CK G  ++AL++ + +  KG
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P+ VT+++LI   C  G  + A  L  + V    +P+ + ++ LI+   K+ +  E  
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707

Query: 420 RL 421
            +
Sbjct: 708 TI 709



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 9/170 (5%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAK--ITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V+  LID L   G  K   +L K+M +       S+F +    +G  K G    A    L
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYG--KAGLPGQATRLLL 153

Query: 459 EKTDKTDGGYC-SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           +      G YC  P    Y  +++ L        A  +F DM S  + P   T+  +++ 
Sbjct: 154 DMW----GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKA 209

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
                 +     LL DM K G VP+++I Q+++    EN  +  A +  E
Sbjct: 210 FCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLE 259


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 249/508 (49%), Gaps = 34/508 (6%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N ++N   ++ K    +    ++   G   + VT+  L++  C +G V +A+ L D M+ 
Sbjct: 129 NIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVL 188

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
               P ++    +++GLC ++++ EA  +   M   G  PN +TY  +++  CK  +   
Sbjct: 189 SQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL+   +M H  ++P+VVT+ +++D LCK G L  A +FF  M   G+  N+F YN LI 
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C  G   +   L  +M   +I+P+V T++ LI  L   G+L  A+ L  +M   GI  
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N +TYNSLI G C +  +++A  +   M  KG +P++ T++ LI+G CKA  +D  M L+
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M ++ ++ D V ++ LI G  +   +    ++++EM+   + P + T + L+ GL  N
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488

Query: 448 GRISNALNFFLEKTDKTD------------GGYCSPNHV--------------------L 475
           G +  AL   L++  K               G C+ N V                     
Sbjct: 489 GELEEALG-ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++  LC    + +A  LF  M+ D   PD CTY T++R  LR   +   + L+ +M 
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + G   DA   ++ V     +G+L  +F
Sbjct: 608 RCGFSSDASTVKI-VMDMLSSGELDKSF 634



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 224/463 (48%), Gaps = 5/463 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L +GL+   K D+V   ++ M+    +  V+ +  L             L L  +M  KG
Sbjct: 62  LRSGLVDIKKDDAV-ALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKG 120

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   +    I+I+  C   K+  A S    + + G  PN  T+N L++G C    V  A+
Sbjct: 121 IAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAV 180

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E    M+     P+++T   +++GLC    +  A +    M   G  PN F Y  +++  
Sbjct: 181 ELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRM 240

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK+GN   A+ L  +ME  +I P V TY I+I  LC  G+L+ A     +M  +GI ANV
Sbjct: 241 CKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANV 300

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TYNSLI  +C  G  +    +   M  + + PNVVTFS+LID   K G +  A  LY E
Sbjct: 301 FTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNE 360

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+ + + P+ + + +LI GL  D  + E  ++   M+     P ++T + LI+G  K  +
Sbjct: 361 MITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           + + +  F + + +   G  + + V Y+ +IQ  C   +++ A K+F +M S  + P   
Sbjct: 421 VDDGMRLFRKMSLR---GMIA-DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           TY  +L GL     + + + +L  M K  +  D  I  +++ G
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHG 519


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/483 (32%), Positives = 243/483 (50%), Gaps = 17/483 (3%)

Query: 61  AFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            F + G IEEAL    ++ +     P     N L+NGL K G      E  + M+  G  
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D+ TY  LI   C  G+V +A+ + ++MI++   P  V Y  +I  LC EN++ EA  +
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              +   G++P++ TYN+L+ G C   +   A+E Y EM      P+  T+ +L+D LC 
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G+L+ A N    M   G   N+  YN LIDG CK   + EA  +  +ME   +S +  T
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC   ++E A  L+ +M  EG+  +  TYNSL+  +CK GD++KA  +   M 
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G EP++VT+ +LI G CKAG ++AA  L   + +K +      +  +I  L +    K
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSK 633

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           E +RL++EM+E    P   T   +  GL +  G I  A++F +E  ++   GY       
Sbjct: 634 EAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER---GYVPEFSSF 690

Query: 476 Y--AAIIQALCYDGQILKASKLFSDMRSDNLR-PDNCTYTTMLRGLLRAKRMLDVMMLLA 532
           Y  A  + +L   G ++K      DM  +  +  DN    TM+RG L+  +  D +  L 
Sbjct: 691 YMLAEGLFSLAMVGTLIK----LIDMVMEKAKFSDN--EVTMIRGFLKISKYQDALATLG 744

Query: 533 DMI 535
            ++
Sbjct: 745 GIL 747



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 268/525 (51%), Gaps = 13/525 (2%)

Query: 48  PKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALL---NGLIKKGKFDS 102
           P F PS  +F  ++    + G  +    + +++++  ++   ++LL         G ++ 
Sbjct: 83  PNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNE 142

Query: 103 VWEFYEEM-VLCGLVADVVTYGVLIDCCCGQGDVMKALNL-FDEMIDKGIEPTVVIYTIL 160
           + +F + M V  G+VA+   Y  L++     G+ +K + +    M+ +GI P V  + IL
Sbjct: 143 ILQFVDAMEVEFGVVANTHFYNFLLNVLV-DGNKLKLVEIAHSNMVSRGIRPDVSTFNIL 201

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I  LC  +++  A  +   M + G++P+  T+  +M G+ +  +++ A+    +M+    
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
               VT  VL++G CK G +  A  F   M+ + G FP+ + +N L++G  K G++  A+
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHAL 321

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            +   M +    PD++TYN LI GLC +G+++ A  +L +M +     N VTYN++I   
Sbjct: 322 EVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTL 381

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CKE  +E+A  +   +T KG+ P+V T++SLI G C + N   AM LY EM  K   PD 
Sbjct: 382 CKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDE 441

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             +  LID L   G ++E L L KEM  +    +V T ++LI G  KN RI+ A   F  
Sbjct: 442 FTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIF-- 499

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D+ +    S N V Y  +I  LC   ++ +AS+L   M  + LRPD  TY ++L    
Sbjct: 500 --DQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFC 557

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +A  +     ++  M   G  PD V    ++ G  + G +++A +
Sbjct: 558 KAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATK 602



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 182/606 (30%), Positives = 278/606 (45%), Gaps = 64/606 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNS-LEIPKFNPSVFST-- 57
           +FY  +    +K +  + K+V   L K+ +        F+A+   L+  K + SV     
Sbjct: 75  LFYWASKQPNFKPSSSIFKEVLHKLGKAGE--------FDAMKDILKEMKISLSVIDNDS 126

Query: 58  ---LIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEEM 110
               I +++  G   E L     +EV   + A     N LLN L+   K   V   +  M
Sbjct: 127 LLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNM 186

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE--- 167
           V  G+  DV T+ +LI   C    +  A+ L +EM D G+ P    +T ++ G   E   
Sbjct: 187 VSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNL 246

Query: 168 -------NKMVEA----------------------ESMFR-----SMRECGVVPNLYTYN 193
                   +MVEA                      E   R     S+RE G  P+ YT+N
Sbjct: 247 DGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE-GFFPDKYTFN 305

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L++G  K   V  ALE    ML     P++ T+  L+ GLCK+GE+  A      M + 
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
              PN   YN +I   CK   + EA  L   +    I PDV TYN LI+GLC       A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L ++M  +G   +  TYN LID  C  G +++AL++  +M   G   NV+T+++LIDG
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK   I  A  ++ +M ++ +  + V +  LIDGL K   ++E  +L  +M+   + P 
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            FT +SL+    K G I  A +    +T  +DG  C P+ V Y  +I  LC  G++  A+
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIV--QTMASDG--CEPDIVTYGTLIAGLCKAGRVEAAT 601

Query: 494 KLFS--DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           KL     M+  NL P    Y  +++ L R KR  + + L  +MI+    PDAV  +++ R
Sbjct: 602 KLLRTIQMKGINLTPH--AYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFR 659

Query: 552 GYQENG 557
           G  + G
Sbjct: 660 GLCQGG 665



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 253/534 (47%), Gaps = 8/534 (1%)

Query: 32  HHVCYSVFNALNSLEIPKFNPS-VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNAL 90
           H    +  N+   L  P F P+ +  +L         I    W  ++    P+      +
Sbjct: 37  HEPLTTTTNSATRLS-PNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEV 95

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKG 149
           L+ L K G+FD++ +  +EM +   V D  +  V I+     G   + L   D M ++ G
Sbjct: 96  LHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFG 155

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +      Y  L++ L + NK+   E    +M   G+ P++ T+N L+   C+   +  A+
Sbjct: 156 VVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAI 215

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM    L P+  TF  +M G  + G L  A      M + G        N L++G 
Sbjct: 216 LLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGF 275

Query: 270 CKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           CK G + EA+    EM   E   PD +T+N+L+ GL   G ++ A  ++  M +EG   +
Sbjct: 276 CKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPD 335

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           + TYNSLI G CK G++++A+ V +QM E+   PN VT++++I   CK   ++ A  L  
Sbjct: 336 IYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLAL 395

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            +  K ++PDV  + +LI GL    N    + LYKEM      P  FT + LI  L   G
Sbjct: 396 VLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRG 455

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           ++  ALN   E     +   C+ N + Y  +I   C + +I +A ++F  M    +  ++
Sbjct: 456 KLQEALNLLKE----MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            TY T++ GL +++R+ +   L+  MI  G+ PD      ++  + + GD+K A
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKA 565


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 263/549 (47%), Gaps = 11/549 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +      ++A   L   R+   +P++ + N++L  L KK K D     ++ M
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  ++ TY ++ID  C  G V +A  + DEM   G+ P ++   I++  LC  N++
Sbjct: 378 KK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQL 436

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F S  E G  PN  TY +L+DG  K   ++ A   + +ML      N + +  L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +      G        +  M + G  P++ + N  +D   KAG + +  ++  +M+ F  
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV +Y+ILI GL   GQ      + Q M ++G   +   YN+++DG CK G ++KA  
Sbjct: 557 LPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M  K V P V T+ S++DG  K   +D A  L+ E   K +  +V+++++LIDG  
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +EM++  +TP+V+T +SL+  L K   I  AL  F    +      CS
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK----CS 732

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y+ +I  LC   +  KA   + +M+   L P+  TYTTM+ GL +   + D   L
Sbjct: 733 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSL 792

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
                  G +PD+     ++ G         A++  E   E+R+        T  S L  
Sbjct: 793 FERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFE---ETRLRGCRLNVKTCISLLDA 849

Query: 591 LKPTVYKEQ 599
           L  T   EQ
Sbjct: 850 LNKTECLEQ 858



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 239/480 (49%), Gaps = 8/480 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           PSV  F++++    +   ++EAL ++   K +  P I   N +++ L   G+ +  ++  
Sbjct: 349 PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIR 408

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM L GL  ++++  +++D  C    + +A  +F+   ++G  P  V Y  LI GL  +
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +A  +F  M + G   N   Y +L+  +          + Y EM+    +P++   
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              MD + K GE+      F  M  FG  P++  Y+ LI G  KAG   E  ++   M +
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              + D   YN ++ GLC  G+++ A  +L++M  + +   V TY S++DG  K   +++
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDE 648

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +   KG+E NV+ +SSLIDG  K G ID A  +  EM+ K L P+V  + +L+D
Sbjct: 649 AYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K   + E L  ++ M E K +P+ +T S LI+GL +  + + A  F+ E   +    
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG--- 765

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V Y  +I  L   G I  A  LF   +++   PD+ ++  ++ G+  A R ++ 
Sbjct: 766 -LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEA 824



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 200/402 (49%), Gaps = 7/402 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFDSVWE 105
           N   + +LI    + G I++A  ++ K+  L A    N     +L+      G+ +   +
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKM--LDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y+EM+  G   D+      +DC    G+V K   +F++M   G  P V  Y+ILIHGL 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  E  ++F++M + G   +   YNA++DG CK   V++A E   EM   ++ P V 
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+G ++DGL K+  L  A   F      G+  N+ +Y+ LIDG  K G + EA  +  EM
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  ++P+V+T+N L+  L    +++ A    Q M +     N  TY+ LI+G C+    
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA     +M ++G+ PNVVT++++I G  K GNI  A  L+        +PD   F AL
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNAL 811

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           I+G+S      E  ++++E        +V T  SL+  L K 
Sbjct: 812 IEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKT 853



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 228/485 (47%), Gaps = 5/485 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           AC AL+  L++  + +  +     M           Y VLI          +AL L  +M
Sbjct: 143 ACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQM 202

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            D G E +V ++T L+  L  E +M  A ++   ++   + P++  YN  +D + K   V
Sbjct: 203 QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + A +F+HE+  H L+P+ V++  ++  LCK G L  A   F  M      P  + YN +
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G+  A    +A  L   + +    P V ++N ++  L    +++ A  L   M K+  
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA- 381

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N+ TYN +ID  C  G + +A  +  +M   G+ PN+++ + ++D  CKA  ++ A  
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           ++     +   P+ V + +LIDGL K G + +  RL+++ML+A    +    +SLI   F
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            +GR  +    + E   +  GG   P+  L    +  +   G++ K   +F DM+S    
Sbjct: 502 MHGRKEDGHKIYKEMIRR--GG--RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD  +Y+ ++ GL +A +  +   +   M + G   DA     +V G  ++G +  A+  
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 566 SEFLK 570
            E +K
Sbjct: 618 LEEMK 622



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 165/317 (52%), Gaps = 13/317 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSV 103
           F P V  +S LI   ++ G   E   +++ +      L A +A NA+++GL K GK D  
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA-RAYNAVVDGLCKSGKVDKA 614

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +E  EEM +  +   V TYG ++D       + +A  LF+E   KGIE  V++Y+ LI G
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                ++ EA  +   M + G+ PN+YT+N+LMD   K  +++ AL  +  M      PN
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPN 734

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+ +L++GLC+V +   A  F+  M K G+ PN+  Y  +I G  K GN+ +A SL  
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSL-- 792

Query: 284 EMEKFEIS---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             E+F+ +   PD  ++N LI+G+    +   A  + ++    G   NV T  SL+D   
Sbjct: 793 -FERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALN 851

Query: 341 KEGDMEKALSVCSQMTE 357
           K   +E+A  V + ++E
Sbjct: 852 KTECLEQAAIVGAVLSE 868


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 266/557 (47%), Gaps = 44/557 (7%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNAL 90
           + +  F+ L S  + K +   ++++I    + G + EA  ++ ++E    +P   A N +
Sbjct: 270 MAWKFFHELKSQGL-KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G    G+F++ ++  +++   G +  VV++  ++ C   +  V +AL LF+ M  K  
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDA 387

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           EP    Y I+I  LC   K+ EA  +   M   G+ PNL T N ++D  CK      A E
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA-----------------------GNFF 247
            +         PN VT+  L+DGL K G +  A                        NFF
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 248 VH------------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +H            M + G  P++ + N  +D   KAG++ +  ++  +++ +   PDV 
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +Y+ILI GL   GQ      +   M ++G   +   YN+++DG+CK G ++KA  V  +M
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             K V P V T+ S+IDG  K   +D A  L+ E   K +  +V+V+++LIDG  K G +
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 687

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E   + +EM++  +TP+V+T +SL+  L K   I+ AL  F    +      CSPN   
Sbjct: 688 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK----CSPNTYT 743

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y+ +I  LC   +  KA   + +M+   L P+  TYTTM+ GL +   + D   L     
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFK 803

Query: 536 KMGIVPDAVINQVMVRG 552
             G  PDA     ++ G
Sbjct: 804 ANGGTPDAASFNALIEG 820



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 250/489 (51%), Gaps = 9/489 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           ++F A+     P  N S ++ +I      G +EEA  +  ++E   + P +   N +++ 
Sbjct: 378 TLFEAMKKDAEP--NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDR 435

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  KF+  +E +E     G   + VTY  LID    +G+V  A  LF+ M+D G    
Sbjct: 436 LCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNAN 495

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V+YT LI       +  +   +F+ M   G  P+L   N  MD   K  DV +    + 
Sbjct: 496 PVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFE 555

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           ++  +   P+V ++ +L+ GL K G+ R   + F  M + G   +   YN ++DG CK+G
Sbjct: 556 DIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSG 615

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L +A  +  EM+   + P V TY  +I GL  + +L+ A  L ++   +GI  NV+ Y+
Sbjct: 616 KLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 675

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           SLIDG+ K G +++A  +  +M +KG+ PNV T++SL+D   KA  I+ A+  +  M   
Sbjct: 676 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEM 735

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              P+   ++ LI+GL +     +    ++EM +  + P+V T +++I GL K G I++A
Sbjct: 736 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDA 795

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            + F  +  K +GG  +P+   + A+I+ + +  + ++A  +F + R    R +     +
Sbjct: 796 CSLF--ERFKANGG--TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACIS 851

Query: 514 MLRGLLRAK 522
           +L  L +A+
Sbjct: 852 LLDALNKAE 860



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 247/523 (47%), Gaps = 8/523 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+TL+ A +  G +E AL +  +++   + P I   N  ++   K G  D  W+F+ E+
Sbjct: 219 LFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 278

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D V+Y  +I   C  G + +A  LF +M  +   P    Y  +I G  +  + 
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQF 338

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   ++E G +P++ ++N+++    K   V+ AL  + E +  + +PN  T+ ++
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNII 397

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LC  G++  A      M   G+FPN+   N ++D  CKA     A  +     +   
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P+  TY  LI GL   G ++ A  L + M   G  AN V Y SLI  +   G  E    
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M  +G +P++   ++ +D   KAG+++    ++ ++     +PDV  ++ LI GL+
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G  +ET  ++  M +          ++++ G  K+G++  A     E   K       
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR----VP 633

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P    Y +II  L    ++ +A  LF + +S  +  +   Y++++ G  +  R+ +  ++
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           L +M+K G+ P+      ++    +  ++  A  C + +KE +
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 227/489 (46%), Gaps = 5/489 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           AC  L++ L++  + D        M           Y VLI          +AL L  +M
Sbjct: 149 ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM 208

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            + G E  V ++T L+  L  E ++  A ++   ++   + P++  YN  +D + K  +V
Sbjct: 209 QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 268

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + A +F+HE+    L+P+ V++  ++  LCK G L  A   F  M      P  + YN +
Sbjct: 269 DMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G+  AG    A  L  ++++    P V ++N ++  L    +++ A  L + M K+  
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA- 387

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N  TYN +ID  C  G +E+A  +  +M   G+ PN++T + ++D  CKA   + A  
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           ++     +   P+ V + +LIDGL K GN+ +  RL++ ML+     +    +SLI   F
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            +GR  +    F E   +     C P+  L    +  +   G + K   +F D++     
Sbjct: 508 MHGRKEDGHKIFKEMNRRG----CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD  +Y+ ++ GL +A +  +   +   M + G   DA     +V G+ ++G L  A+  
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV 623

Query: 566 SEFLKESRI 574
            E +K  R+
Sbjct: 624 LEEMKVKRV 632



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 234/542 (43%), Gaps = 40/542 (7%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           + ++    +   E  +   R+++  PA  A   L+  + +  + +   E   +M   G  
Sbjct: 155 SALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYE 214

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI-------------------- 156
             V  +  L+     +G V  AL L DE+    +EP +V+                    
Sbjct: 215 VGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 274

Query: 157 ---------------YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
                          YT +I  LC   ++ EAE +F  M     VP  Y YN ++ GY  
Sbjct: 275 FHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGS 334

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A +   ++      P+VV+F  ++  L K  ++  A   F  M K    PN   
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSST 393

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +ID  C AG + EA  +  EME   + P++ T NI++  LC   + E A  + +   
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G   N VTY SLIDG  K+G+++ A  +   M + G   N V ++SLI      G  +
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
               ++ EM  +   PD+ +    +D + K G++++   +++++      P V + S LI
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HGL K G+     + F     +   G+       Y A++   C  G++ KA ++  +M+ 
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQ---GFALDARA-YNAVVDGFCKSGKLDKAYEVLEEMKV 629

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + P   TY +++ GL +  R+ +  ML  +    GI  + ++   ++ G+ + G +  
Sbjct: 630 KRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 689

Query: 562 AF 563
           A+
Sbjct: 690 AY 691



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +E+   ++  I+    LP +++ + L++GL K G+       +  M   G   D   Y
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             ++D  C  G + KA  + +EM  K + PTV  Y  +I GL   +++ EA  +F   + 
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  N+  Y++L+DG+ KV  ++ A     EM+   L PNV T+  LMD L K  E+  
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M +    PN + Y+ LI+G C+     +A     EM+K  + P+V TY  +I 
Sbjct: 725 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIA 784

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL  VG +  A  L ++    G   +  ++N+LI+G        +A  V  +   KG   
Sbjct: 785 GLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRI 844

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
           NV    SL+D   KA  ++ A
Sbjct: 845 NVKACISLLDALNKAECLEQA 865



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 13/311 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSV 103
           F P V  +S LI   ++ G   E   ++  ++     L A +A NA+++G  K GK D  
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDA-RAYNAVVDGFCKSGKLDKA 620

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +E  EEM +  +   V TYG +ID       + +A  LF+E   KGIE  V++Y+ LI G
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                ++ EA  +   M + G+ PN+YT+N+LMD   K  ++N AL  +  M      PN
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+ +L++GLC+V +   A  F+  M K G+ PN+  Y  +I G  K GN+ +A   CS
Sbjct: 741 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDA---CS 797

Query: 284 EMEKFEI---SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             E+F+    +PD  ++N LI+G+    +   A  + ++   +G   NV    SL+D   
Sbjct: 798 LFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALN 857

Query: 341 KEGDMEKALSV 351
           K   +E+A  V
Sbjct: 858 KAECLEQAAVV 868


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 266/552 (48%), Gaps = 16/552 (2%)

Query: 19  KDVTENLLKSRKPHHVCYS-VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
           K +  N + S  PHH  ++ +  + +++  P  + S+ + +I     +GH  +     ++
Sbjct: 109 KSLLLNFISSDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGH--QIFNKMKR 166

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSV---WEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +   P +  CN LLN L++     S+    E +++ V  G+  +V T+ +LI   C   +
Sbjct: 167 LRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNN 226

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
             +AL L ++M + G  P  V Y  ++  LC  +++ +   +   M+  G+ PN  TYN 
Sbjct: 227 TEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNI 286

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ GYCK+  +  A E    M    + P+V T+  ++ GLC  G++  A      M  F 
Sbjct: 287 LVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P++  YN LIDG  +      A  L  EM+   +  +  T+NI+IK  C  G+++ A 
Sbjct: 347 LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEAS 406

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            ++ KM + G   +  TYN++I+GYCK G M +A  +  +M  KG++ +  T ++L+   
Sbjct: 407 NVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C    +D A  L  +   +  + D V +  LI G  KD      L+L++EM E  I  ++
Sbjct: 467 CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATI 526

Query: 435 FTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            T +++I GL  +G+   A   LN  LEK          P+      II   C++G + K
Sbjct: 527 ITYNTIIRGLCLSGKTDQAVDKLNELLEKG-------LVPDESTSNIIIHGYCWEGAVEK 579

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +  + M   +L+PD  T   +LRGL R   +   + L    I  G   D V   +++ 
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639

Query: 552 GYQENGDLKSAF 563
            + +   L+ AF
Sbjct: 640 SFCKERRLEDAF 651



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 250/504 (49%), Gaps = 10/504 (1%)

Query: 25  LLKSRKPHHVCYS--VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL- 81
           L++S   H + +S  VF     L +   N + F+ LI  +    + EEAL +  ++    
Sbjct: 183 LVRSNSSHSLVFSREVFQDAVKLGVQP-NVNTFNILIHGYCSDNNTEEALRLINQMGEYG 241

Query: 82  --PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P     N +L  L K+ +   V +   +M   GL  +  TY +L+   C    + +A 
Sbjct: 242 CCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAA 301

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            + + M  KG+ P V  Y  ++ GLC+E K+ EA  +   M    +VP++ TYN L+DG 
Sbjct: 302 EVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGC 361

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            +    + A +   EM    ++ N VT  +++   C  G++  A N  V M + G  P+ 
Sbjct: 362 FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDC 421

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN +I+G+CKAG + EA  +  EM +  +  D FT N L+  +C   QL+ A  L  K
Sbjct: 422 FTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK 481

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
             K G + + VTY +LI GY K+   ++AL +  +M E G+   ++T++++I G C +G 
Sbjct: 482 ARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGK 541

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            D A+    E++ K LVPD      +I G   +G +++  + + +M+E  + P +FT + 
Sbjct: 542 TDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNI 601

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+ GL + G +   L  F     K        + V Y  II + C + ++  A  L ++M
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGK----PMDTVTYNIIISSFCKERRLEDAFDLMTEM 657

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKR 523
              NL PD  TY  ++ GL +A R
Sbjct: 658 EGKNLEPDRYTYNAIVTGLTKAGR 681



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 239/499 (47%), Gaps = 10/499 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++ L+  + ++  ++EA  V   +    +LP +   N ++ GL  +GK D      
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M    LV DVVTY  LID C        A  L +EM  +G++   V + I+I   C E
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA ++   M E G  P+ +TYN +++GYCK   +  A +   EM    L+ +  T 
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+  +C   +L  A    +   K G   +   Y  LI G+ K      A+ L  EM++
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I   + TYN +I+GLC  G+ + A   L ++ ++G++ +  T N +I GYC EG +EK
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M E  ++P++ T + L+ G C+ G ++  + L+   + K    D V +  +I 
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKT 464
              K+  +++   L  EM    + P  +T ++++ GL K GR   A      F EK  + 
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699

Query: 465 DGGYCSP----NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                SP    + ++Y+  I +LC  G+   A KLF       +  +  TY  ++ GLL+
Sbjct: 700 KTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759

Query: 521 AKRMLDVMMLLADMIKMGI 539
            ++      LL  M+   I
Sbjct: 760 RRKSFTTTSLLPFMVSATI 778



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 216/428 (50%), Gaps = 7/428 (1%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENK---MVEAESMFRSMRECGVVPNLYTYNALM 196
            +F++M      P ++    L++ L   N    +V +  +F+   + GV PN+ T+N L+
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYC   +   AL   ++M  +   P+ VT+  ++  LCK  +L    +  + M   G+F
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   YN L+ G+CK   L EA  +   M    + PDV+TYN +++GLC  G+++ A  L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             KM    ++ +VVTYN+LIDG  +    + A  +  +M  +GV+ N VT + +I   C 
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G ID A  +  +MV     PD   +  +I+G  K G M E  ++  EM    +    FT
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           +++L+H +    ++ +A    ++   +   GY   + V Y  +I     D Q  +A KL+
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKR---GYIL-DEVTYGTLIMGYFKDEQADRALKLW 514

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M+   +     TY T++RGL  + +    +  L ++++ G+VPD   + +++ GY   
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWE 574

Query: 557 GDLKSAFR 564
           G ++ AF+
Sbjct: 575 GAVEKAFQ 582



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 179/368 (48%), Gaps = 7/368 (1%)

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA---AGNFFVHMAKFGVFPNIFVYNCLI 266
           + +++M     +PN++T   L++ L +     +   +   F    K GV PN+  +N LI
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+C   N  EA+ L ++M ++   PD  TYN ++  LC   QL     LL +M   G+ 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N  TYN L+ GYCK   +++A  V   MT KG+ P+V T+++++ G C  G ID A+ L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M    LVPDVV +  LIDG  +        +L +EM    +  +  T + +I     
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G+I  A N  ++  +    G+ SP+   Y  +I   C  G++ +A K+  +M    L+ 
Sbjct: 399 EGKIDEASNVMVKMVE---SGF-SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKL 454

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  T  T+L  +   K++ D   L     K G + D V    ++ GY ++     A +  
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514

Query: 567 EFLKESRI 574
           E +KE+ I
Sbjct: 515 EEMKETGI 522


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 257/507 (50%), Gaps = 9/507 (1%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEA-LWVYRKIE--VLPAIQACNALLNGLIKKG 98
           LN + +P  N    +T++ A+S+MG+I EA L+V +  +  + P      +L+ G  +  
Sbjct: 206 LNDMIVP--NIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
             +S ++ +  M   G   + V+Y  +I   C  G + + ++LF +M +    PTV  YT
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYT 323

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ++IH L   ++ +E   +F  MRE    PN++TY  ++D  CK   ++ +    +EM+  
Sbjct: 324 VIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK 383

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L P+VVT+  L+ G C+ G + AA      M      PN   YN LI G  K  ++ +A
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M+L S+M + +++P + TYN LI   C  G  + A  LL  + + G++ +  TY+  ID 
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK   ME+A  + + + EKG++ N V +++LIDG CKAG ID A+ L   M  +  +P+
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              + +LI G+ K+G ++E L + + M +  + P+V T + LI  + + G   +A   F 
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVF- 622

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                   G+  P+   Y A I   C  G + +A  + + M    + PD+ TYT ++   
Sbjct: 623 --NQMVSFGH-KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVI 545
            R     D   +L  M+  G  P   I
Sbjct: 680 ERLGLAYDAFNVLKRMLDAGCDPSHPI 706



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 255/520 (49%), Gaps = 9/520 (1%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
           KF  SV  ++ L++  +    I+E   VY ++    ++P I   N ++N   K G     
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA 233

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
             +  ++   GL  D  TY  LI   C   DV  A  +F+ M +KG     V YT +IHG
Sbjct: 234 NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHG 293

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   ++ E  S+F+ MRE    P + TY  ++            ++ ++EM   + +PN
Sbjct: 294 LCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+ V++D +CK  +L  +      M + G+ P++  YN LI G+C+ G +  A+ +  
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            ME     P+  TYN LI G      +  A  LL KM +  +  ++VTYNSLI   CK G
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
             + A  +   + E G+ P+  T+S  ID  CK+  ++ A  L+  +  K +  + V++T
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           ALIDG  K G + E + L + M      P+  T +SLI+G+ K G++   L+  +E   K
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM-VENMSK 592

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P    Y  +I+ +  +G    A+++F+ M S   +PD  TYT  +     +  
Sbjct: 593 MG---VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + +   ++A MI+ G++PD++   +++  Y+  G    AF
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 216/431 (50%), Gaps = 6/431 (1%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D MK   ++ EM++  I P +     +++       +VEA      + + G+ P+ +TY 
Sbjct: 196 DEMK--RVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYT 253

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           +L+ GYC+  DVN A + ++ M +   + N V++  ++ GLC+ G +    + F  M + 
Sbjct: 254 SLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMRED 313

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
             +P +  Y  +I          E M L +EM +    P+V TY +++  +C   +L+ +
Sbjct: 314 DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L +M ++G++ +VVTYN+LI GYC+EG +E AL +   M      PN  T++ LI G
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K  ++  AM L ++M+   L P +V + +LI    K G+     +L   + E  + P 
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            +T S  I  L K+ R+  A + F    +K        N V+Y A+I   C  G+I +A 
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKG----IKANEVMYTALIDGHCKAGKIDEAI 549

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L   M S++  P++ TY +++ G+ +  ++ + + ++ +M KMG+ P      +++   
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609

Query: 554 QENGDLKSAFR 564
              GD   A R
Sbjct: 610 LREGDFDHANR 620



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 237/498 (47%), Gaps = 34/498 (6%)

Query: 125 LIDCCCGQGDVMKALNLFDEMI----DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           +I  C    D+   L+   +M     D   + +V  Y  L+  L     + E + ++  M
Sbjct: 146 MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM 205

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
               +VPN+YT N +++ Y K+ ++  A  +  ++    L P+  T+  L+ G C+  ++
Sbjct: 206 LNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDV 265

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            +A   F  M   G   N   Y  +I G C+AG + E +SL  +M + +  P V TY ++
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVI 325

Query: 301 IKGLCGVGQ-LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           I  L G  + LEG + L  +M +     NV TY  ++D  CKE  ++++  + ++M EKG
Sbjct: 326 IHALFGNDRNLEGMD-LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P+VVT+++LI G C+ G I+AA+ +   M   +  P+   +  LI G SK  ++ + +
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L  +MLE+K+TPS+ T +SLIH   K G   +A        D        P+   Y+  
Sbjct: 445 TLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL----DLLKENGLVPDQWTYSVF 500

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC   ++ +A  LF+ ++   ++ +   YT ++ G  +A ++ + + LL  M     
Sbjct: 501 IDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC 560

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET-------------EG---HT 583
           +P++     ++ G  + G ++      E +  S++G   T             EG   H 
Sbjct: 561 LPNSSTYNSLIYGVCKEGKVQEGLSMVENM--SKMGVKPTVATYTILIEEMLREGDFDHA 618

Query: 584 TRSF-----LGHLKPTVY 596
            R F      GH KP VY
Sbjct: 619 NRVFNQMVSFGH-KPDVY 635



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 161/325 (49%), Gaps = 5/325 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++ LI  + E G IE AL +   +E     P  +  N L+ G  K+         
Sbjct: 387 PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTL 446

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +M+   L   +VTY  LI   C  G    A  L D + + G+ P    Y++ I  LC 
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +M EA  +F S++E G+  N   Y AL+DG+CK   ++ A+     M   +  PN  T
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSST 566

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G+CK G+++   +   +M+K GV P +  Y  LI+   + G+   A  + ++M 
Sbjct: 567 YNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV 626

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            F   PDV+TY   I   C  G ++ AEG++ +M + G++ + +TY  LI  Y + G   
Sbjct: 627 SFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAY 686

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLI 371
            A +V  +M + G +P+   +++LI
Sbjct: 687 DAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 158/327 (48%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P++   NAL+ G  ++G+ ++  E    M       +  TY  LI     +  V KA+
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  +M++  + P++V Y  LIH  C       A  +   ++E G+VP+ +TY+  +D  
Sbjct: 445 TLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   +  A + ++ +    ++ N V +  L+DG CK G++  A +    M      PN 
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNS 564

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN LI G CK G + E +S+   M K  + P V TY ILI+ +   G  + A  +  +
Sbjct: 565 STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQ 624

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G   +V TY + I  YC  G++++A  + ++M E GV P+ +T++ LI    + G 
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALI 406
              A  +   M+     P   ++  LI
Sbjct: 685 AYDAFNVLKRMLDAGCDPSHPIWNNLI 711


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 246/481 (51%), Gaps = 16/481 (3%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVE 172
           V D V+Y  ++   C +G   +A  L   M         P  V YT+L+  LC +    +
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + RSMR  GV  ++ TY  L+ G C  A+V++A+E   EM    ++PNVV +  L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK G     G  FV M++ G+ P++ +Y  LID  CK G   +A  +   M +  + P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TYN+LI  +C  G ++ A G+L+KM ++G+  +VVTYN+LI G     +M++A+ + 
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 353 SQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +M      V+PNVVTF+S+I G C  G +  A  +   M     + ++V +  LI GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +++ + L  EM    + P  FT S LI G  K  ++  A +      D+       
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG----IE 429

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P    Y  ++ A+C  G + +A  LF++M  +N   D   Y+TM+ G  +A  +     L
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA------FRCSEFLKESRIGSSETEGHTT 584
           L  ++  G+ PDAV   +++  + ++GD+++A         S FL +  +  S  +G++T
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 585 R 585
           +
Sbjct: 549 K 549



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 249/509 (48%), Gaps = 16/509 (3%)

Query: 47  IPKFNPSV-FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC-------NALLNGLIKKG 98
           +P    +V ++T++ A    GH + A  + R + + P   AC         L+  L    
Sbjct: 71  LPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH-PACRPNAVSYTVLMRALCADR 129

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
             D        M   G+ ADVVTYG LI   C   +V KA+ L  EM + GIEP VV+Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            L+ G C   +  +   +F  M E G+ P++  Y  L+D  CKV    +A      M+  
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+PNVVT+ VL++ +CK G ++ A      M++ GV P++  YN LI G      + EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 279 MSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           M L  EM + +  + P+V T+N +I+GLC +G++  A  +   M + G + N+VTYN LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G  +   + KA+ +  +MT  G+EP+  T+S LI G CK   +D A  L + M  + + 
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P++  +  L+  + + G M+    L+ EM +      V   S++IHG  K G +  A   
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D+      +P+ V Y+ +I      G +  A+ +   M +    PD   + ++++
Sbjct: 489 LKSIVDEG----LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           G      +  V+ L+ +MI   I  D+ I
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKI 573



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 246/502 (49%), Gaps = 16/502 (3%)

Query: 78  IEVLPAIQ---ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA---DVVTYGVLIDCCCG 131
           ++ LP+++   + N +L  L ++G  D        M L    A   + V+Y VL+   C 
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                +A+ L   M   G+   VV Y  LI GLC+  ++ +A  +   M E G+ PN+  
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y++L+ GYCK        + + EM    ++P+VV +  L+D LCKVG+ + A      M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G+ PN+  YN LI+  CK G++ EA+ +  +M +  ++PDV TYN LIKGL  V +++
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 312 GAEGLLQKMY--KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            A  LL++M   K  +  NVVT+NS+I G C  G M +A  V + M E G   N+VT++ 
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G  +   +  AM L  EM    L PD   ++ LI G  K   +     L   M +  
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P +F    L+  + + G +  A N F    ++ D  +   + V Y+ +I   C  G +
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLF----NEMDNNF-PLDVVAYSTMIHGACKAGDL 482

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L   +  + L PD  TY+ ++    ++  M     +L  M   G +PD  +   +
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 550 VRGYQENGDLKSAFRCSEFLKE 571
           ++GY   G++       E ++E
Sbjct: 543 IQGYSTKGEINKVL---ELIRE 561



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 218/425 (51%), Gaps = 39/425 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    +   +++A+ +  ++    + P +   ++LL G  K G+++ V + + EM 
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  DVV Y  LID  C  G   KA  + D M+ +G+EP VV Y +LI+ +C E  + 
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGV 229
           EA  + + M E GV P++ TYN L+ G   V +++ A+    EM+     ++PNVVTF  
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++ GLC +G +R A      M + G   N+  YN LI G  +   + +AM L  EM    
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA---------------------- 327
           + PD FTY+ILIKG C + Q++ AE LL  M   GI                        
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452

Query: 328 ------------NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
                       +VV Y+++I G CK GD++ A  +   + ++G+ P+ VT+S +I+   
Sbjct: 453 NLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+G+++AA G+  +M     +PDV VF +LI G S  G + + L L +EM+   I     
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572

Query: 436 TVSSL 440
            +S+L
Sbjct: 573 IISTL 577


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 248/508 (48%), Gaps = 27/508 (5%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G  E+A  + R++     +P     + ++  L    K D+ +  +EEM    +V DV TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
            +LID  C  G + +A   FDEM+  G  P VV YT LIH      KM  A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH---------------NLQ-PNVVT 226
            G +PN+ TY AL+DG+CK   + +A + Y  M  +               N++ PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +G L+DGLCK  +++ A +    M+  G  PN  VY+ LIDG CK G L EA  + ++M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +    P+V+TY+ LI  L    +L+ A  +L +M +     NV+ Y  +IDG CK G  +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + S M EKG  PNVVT++++IDG  KAG +D  + L  +M  K   P+ V +  LI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +     G + +  +L  EM +      +     +I G  +   IS  L       D+   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL------LDEIAE 872

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS--DNLRPDNCTYTTMLRGLLRAKRM 524
               P    Y  +I + C  G++  A +L   M S       D   Y++++  L  A ++
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRG 552
                L ADMIK G +P+  I   +V+G
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKG 960



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 250/557 (44%), Gaps = 29/557 (5%)

Query: 41  ALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKK 97
           AL   E  K +  +++ +I    E    EEA   L   R    +P +     LL G ++K
Sbjct: 288 ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            +          M+  G       +  LI   C  GD   A  L  +M D G +P  V+Y
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 158 TILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            ILI G+C   K+        AE  +  M +  VV N    + L    C      +A   
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             EM+     P+  T+  ++  LC   ++  A   F  M    V P++F Y  LID  CK
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L +A     EM +   +P+V TY  LI       ++  A  L + M  EG + NVVT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKG----------------VEPNVVTFSSLIDGQC 375
           Y +LIDG+CK G +EKA  + ++M                     +PN+ T+ +L+DG C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA  +  A  L   M ++   P+ +V+ ALIDG  K G + E   ++ +M E    P+V+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SSLI  LFK+ R+  AL       + +    C+PN ++Y  +I  LC  G+  +A +L
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENS----CAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S M      P+  TYT M+ G  +A ++   + L+  M   G  P+ V  +V++     
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 556 NGDLKSAFRCSEFLKES 572
            G L  A +  + +K++
Sbjct: 824 AGLLDDAHQLLDEMKQT 840



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G   EAL +  K E          +++GL +   F+   +F   M     + +VVTY +L
Sbjct: 281 GRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           +  C  +  + +   +   MI +G  P+  I+  LIH  C       A  + + M +CG 
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400

Query: 186 VPNLYTYNALMDGYC---KVADVN---RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
            P    YN L+ G C   K+  ++    A + Y EML  ++  N V    L   LC  G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A +    M   G  P+   Y+ +I   C A  +  A  L  EM+   + PDVFTY I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI   C VG L+ A     +M ++G   NVVTY +LI  Y K   M  A  +   M  +G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             PNVVT+++LIDG CK+G I+ A  +Y  M   + +PDV ++  +      DGN+++  
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI-----DDGNIRD-- 633

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
                       P++FT  +L+ GL K  ++  A +      D      C PNH++Y A+
Sbjct: 634 ------------PNIFTYGALVDGLCKAHKVKEARDLL----DVMSVEGCEPNHIVYDAL 677

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I   C  G++ +A  +F+ M      P+  TY++++  L + KR+   + +L+ M++   
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            P+ +I   M+ G  + G    A+R    ++E
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 243/494 (49%), Gaps = 23/494 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           + S +S +I        ++ A  ++ +++   V+P +     L++   K G      +++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV  G   +VVTY  LI        +  A  LF+ M+ +G  P VV YT LI G C  
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 168 NKMVEAESMFRSMRECGVVP----------------NLYTYNALMDGYCKVADVNRALEF 211
            ++ +A  ++  MR    +P                N++TY AL+DG CK   V  A + 
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M     +PN + +  L+DG CKVG+L  A   F  M++ G  PN++ Y+ LID   K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              L  A+ + S M +   +P+V  Y  +I GLC VG+ + A  L+  M ++G   NVVT
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y ++IDG+ K G ++K L +  QM  KG  PN VT+  LI+  C AG +D A  L  EM 
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                  +  +  +I+G +++  +  +L L  E+ E    P +     LI    K GR+ 
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL   L K   +   Y + +  LY+++I++L    ++ KA +L++DM      P+   +
Sbjct: 897 LALE--LHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 512 TTMLRGLLRAKRML 525
             +++GL+R  R L
Sbjct: 955 FYLVKGLIRINRTL 968



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 220/493 (44%), Gaps = 58/493 (11%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           VLI  CC  G    AL     + D G +P+ + Y  L+      +++  A  + R M + 
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 184 GVVPNLYT--------------------------------YNALMDGYCKVADVNRALEF 211
           G   + YT                                Y  ++ G C+ +    A++F
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDF 321

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M   +  PNVVT+ +L+ G  +  +L         M   G +P+  ++N LI  +C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG------VGQLEGAEGLLQKMYKEGI 325
           +G+   A  L  +M      P    YNILI G+CG      +  LE AE    +M    +
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHV 441

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N V  ++L    C  G  EKA S+  +M  KG  P+  T+S +I   C A  +D A  
Sbjct: 442 VLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFL 501

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM    +VPDV  +T LID   K G +++  + + EM+     P+V T ++LIH   
Sbjct: 502 LFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYL 561

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD--- 502
           K  ++S+A   F  +   ++G  C PN V Y A+I   C  GQI KA ++++ MR +   
Sbjct: 562 KARKMSSANELF--EMMLSEG--CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 503 ------------NLR-PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
                       N+R P+  TY  ++ GL +A ++ +   LL  M   G  P+ ++   +
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 550 VRGYQENGDLKSA 562
           + G+ + G L  A
Sbjct: 678 IDGFCKVGKLDEA 690


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 260/548 (47%), Gaps = 46/548 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS   L+    +    +EAL + + +     +  P + +   ++NG  K+G  D  +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y EM+  G++ +VVTY  +I   C    + KA+ +   M+  G+ P    Y  ++HG 
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  EA    + M   GV P++ TYN+LMD  CK      A + +  M    L+P +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+G L+ G    G L         M + G+ PN +V++ LI  + K G + +AM + S+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--------------------- 323
           M +  ++PD  TY  +I  LC  G++E A    ++M  E                     
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 324 --------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                         GI  + + +NS+ID +CKEG + ++  +   M   GV+PN++T+S+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C AG +D A  L   MV   + PD V +  LI+G  K   M++ L L++EM  + 
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ++P + T + ++ GLF+  R + A   ++  T+       S     Y  I+  LC +   
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST----YNIILHGLCKNNLT 635

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 550 VRGYQENG 557
                E G
Sbjct: 696 AENLIEQG 703



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  ++ TYG+LI  CC  G +         +I KG     + +T L+ G
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M + G +PN+++YN L+ G C                      
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 201 ---------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                          K  D+++A   YHEML   + PNVVT+  ++  LCK   +  A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K GV PN   YN ++ G+C +G   EA+    +M    + PDV TYN L+  LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            FS LI    K G +D AM ++++M  + L PD V +  +I  L K G +++ +R +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++ +++P     +SLIH L    +   A    LE  D+   G C  + + + +II + C 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR---GIC-LDTIFFNSIIDSHCK 491

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+++++ KLF  M    ++P+  TY+T++ G   A +M +   LLA M+ +G+ PD V 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 546 NQVMVRGY 553
              ++ GY
Sbjct: 552 YNTLINGY 559



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 261/551 (47%), Gaps = 10/551 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++++I A  +   +++A+ V     K  V+P  +  N++++G    G+      F 
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P +  Y  L+ G   +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VE   +   M   G+ PN Y ++ L+  Y K   V++A+  + +M    L P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G ++  LCK G +  A  +F  M    + P   VYN LI   C      +A  L  EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N +I   C  G++  +E L   M + G+  N++TY++LIDGYC  G M++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDE 532

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M   G++P+ VT+++LI+G CK   ++ A+ L+ EM    + PD++ +  ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL +         LY  + E+     + T + ++HGL KN     AL  F +    TD  
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF-QNLCLTD-- 649

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                   +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M   L+    + ++
Sbjct: 650 -LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L   M + G   ++ +   +VR   + GD+  A      + E        E  T   F
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF---SLEASTASLF 765

Query: 588 LGHLKPTVYKE 598
           L  L    Y+E
Sbjct: 766 LDLLSGGKYQE 776



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 178/365 (48%), Gaps = 52/365 (14%)

Query: 243 AGNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFEAMSLCSEMEKF---EISPDVFT 296
           A + F  + + G   +I+  NC    +  H  A     A+S  + M +    E++P++ T
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA----AVSRYNRMARAGADEVTPNLCT 93

Query: 297 YNILIKGLCGVGQL------------------------------------EGAEGLLQKM 320
           Y ILI   C  G+L                                    +  + +L++M
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAG 378
            + G + NV +YN L+ G C E   ++AL +   M + G +  P+VV+++++I+G  K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A G Y EM+ + ++P+VV + ++I  L K   M + + +   M++  + P+  T +
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++HG   +G+   A+ F   K   +DG    P+ V Y +++  LC +G+  +A K+F  
Sbjct: 274 SIVHGYCSSGQPKEAIGFL--KKMHSDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+P+  TY T+L+G      ++++  LL  M++ GI P+  +  +++  Y + G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 559 LKSAF 563
           +  A 
Sbjct: 390 VDQAM 394



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 10/285 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V PN+ T+
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    P+VF+ + L+ GL    R   AL       D  DGG C P+ V Y  +I     +
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKE 212

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + KA   + +M    + P+  TY +++  L +A+ M   M +L  M+K G++P+    
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             +V GY  +G  K A     FLK+      E +  T  S + +L
Sbjct: 273 NSIVHGYCSSGQPKEAI---GFLKKMHSDGVEPDVVTYNSLMDYL 314



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 16/258 (6%)

Query: 319 KMYKEG---ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +M + G   +  N+ TY  LI   C  G ++   +    + +KG   + + F+ L+ G C
Sbjct: 78  RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 137

Query: 376 KAGNIDAAMGL-YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITP 432
                  AM +    M     +P+V  +  L+ GL  +   +E L L + M +      P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V + +++I+G FK G +  A   + E  D+       PN V Y +II ALC    + KA
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG----ILPNVVTYNSIIAALCKAQAMDKA 253

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++ + M  + + P+  TY +++ G   + +  + +  L  M   G+ PD V    ++  
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313

Query: 553 YQENGDLKSAFRCSEFLK 570
             +NG      RC+E  K
Sbjct: 314 LCKNG------RCTEARK 325


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 246/493 (49%), Gaps = 23/493 (4%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNG- 93
           +V+  +  LEI    P++  ++TL+ +F + G  +EA  + +++E     Q    LLN  
Sbjct: 229 AVYREMLQLEI---EPTIVTYNTLLDSFLKEGRKDEASMLLKEMET----QGGGCLLNDV 281

Query: 94  --------LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
                   L ++G  ++  +  + M L    A   TY  LI     +G V K   L  EM
Sbjct: 282 TYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEM 340

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GI PT+V Y  +IHGL    ++  A+  F  MR  G++P+L TYN++++GYCK  ++
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL    ++    L P V+T+  L+DG C++G L  A      M + G FP++  Y  L
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTIL 460

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++G  K  NL  A     EM    + PD F YN  I     +G    A  L + M  +GI
Sbjct: 461 MNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGI 520

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             + VTYN +IDG CK G+++ A  +  +M   G++P+ +T++ LI   C+ G +  A  
Sbjct: 521 YPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARK 580

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L   MV   L P VV +T LI    + GN+      +++ML+  I P+  T + LIH L 
Sbjct: 581 LLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 640

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           + GR   A + F E  ++      +PN   Y  +I   C +G    A +L+ +M  + + 
Sbjct: 641 RTGRTLLAYHHFHEMLERG----LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIP 696

Query: 506 PDNCTYTTMLRGL 518
           PD CT+  + +G 
Sbjct: 697 PDYCTHNALFKGF 709



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 156/488 (31%), Positives = 236/488 (48%), Gaps = 12/488 (2%)

Query: 74  VYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG---LVADVVTYGVLID 127
           VYR   ++E+ P I   N LL+  +K+G+ D      +EM   G   L+ DV TY V+I 
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDV-TYNVVIS 288

Query: 128 CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
               +G +  A  L D M     + +   Y  LI  L     + + E++   M   G++P
Sbjct: 289 FLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMP 347

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
            L TYNA++ G  K   V  A   + EM    L P+++T+  +++G CK G L+ A    
Sbjct: 348 TLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLL 407

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             + + G+ P +  YN LIDG+C+ G L EA  L  EM +    PDV TY IL+ G   V
Sbjct: 408 GDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKV 467

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
             L  A     +M  +G+  +   YN+ I      GD  KA  +   M  KG+ P+ VT+
Sbjct: 468 RNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTY 527

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + +IDG CK GN+  A  L  +MV   L PD + +T LI    + G + E  +L   M+ 
Sbjct: 528 NVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVS 587

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + PSV T + LIH   + G + +A  +F +  D        PN + Y  +I ALC  G
Sbjct: 588 DGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG----IEPNEITYNVLIHALCRTG 643

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           + L A   F +M    L P+  TYT ++ G  R     D + L  +M + GI PD   + 
Sbjct: 644 RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHN 703

Query: 548 VMVRGYQE 555
            + +G+ +
Sbjct: 704 ALFKGFDK 711



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/449 (32%), Positives = 234/449 (52%), Gaps = 10/449 (2%)

Query: 16  CLIKDVTENLLKS---RKPHHVCYSVFNALNSLEIPKFNPS-VFSTLIIAFSEMGHIE-- 69
           CL+ DVT N++ S   R+ H    +    ++S+ + K   S  ++ LI A  E G ++  
Sbjct: 276 CLLNDVTYNVVISFLAREGH--LENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKV 333

Query: 70  EALWVYRKIE-VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC 128
           EAL +  + E ++P +   NA+++GL+K  + ++    + EM   GL+ D++TY  +++ 
Sbjct: 334 EALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNG 393

Query: 129 CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            C  G++ +AL L  ++   G+ PTV+ Y  LI G C    + EA  +   M E G  P+
Sbjct: 394 YCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPD 453

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           + TY  LM+G  KV ++  A EF+ EML   LQP+   +   +     +G+   A     
Sbjct: 454 VCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLRE 513

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G++P+   YN +IDG CK GNL +A  L  +M    + PD  TY  LI   C  G
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            L  A  LL  M  +G+  +VVTY  LI   C+ G++  A     +M + G+EPN +T++
Sbjct: 574 LLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 633

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            LI   C+ G    A   + EM+ + L P+   +T LIDG  ++GN  + +RLY EM + 
Sbjct: 634 VLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 693

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFF 457
            I P   T ++L  G F  G + +A+ + 
Sbjct: 694 GIPPDYCTHNALFKG-FDKGHMYHAIEYL 721



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 202/422 (47%), Gaps = 17/422 (4%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P V     ++  L +  +  +  +++R M +  + P + TYN L+D + K    + A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 209 LEFYHEMLHH--NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
                EM         N VT+ V++  L + G L  A      M +     + F YN LI
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLI 321

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
               + G + +  +L  EME   I P + TYN +I GL    Q+E A+    +M   G+L
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +++TYNS+++GYCK G++++AL +   +   G+ P V+T+++LIDG C+ G ++ A  L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EMV +   PDV  +T L++G  K  N+      + EML   + P  F  ++ I     
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G    A  F L +     G Y  P+ V Y  II  LC  G +  A  L   M SD L+P
Sbjct: 502 LGDTHKA--FQLREVMMLKGIY--PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQP 557

Query: 507 DNCTYTTML-----RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           D  TYT ++     RGLL   R      LL  M+  G+ P  V   +++      G+L S
Sbjct: 558 DCITYTCLIHAHCERGLLSEAR-----KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYS 612

Query: 562 AF 563
           A+
Sbjct: 613 AY 614



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 52/358 (14%)

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  +A  GV P++   NC++     A    +  ++  EM + EI P + TYN L+     
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 307 VGQLEGAEGLLQKMYKE--GILANVVTYNSLIDGYCKEGDMEKALSVCS----------- 353
            G+ + A  LL++M  +  G L N VTYN +I    +EG +E A  +             
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF 315

Query: 354 -----------------------QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
                                  +M  +G+ P +VT++++I G  K+  ++AA   + EM
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               L+PD++ + ++++G  K GN+KE L L  ++  A + P+V T ++LI G  + G +
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A      K +  + G C P+   Y  ++        +  A + F +M S  L+PD   
Sbjct: 436 EEARRL---KEEMVEQG-CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFA 491

Query: 511 YTTMLRGLL------RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y T +   L      +A ++ +VMML       GI PD V   V++ G  + G+LK A
Sbjct: 492 YNTRICAELILGDTHKAFQLREVMML------KGIYPDTVTYNVIIDGLCKTGNLKDA 543



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 9/253 (3%)

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G+  +V   N ++         +   +V  +M +  +EP +VT+++L+D   K G  D 
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 383 AMGLYTEMVIKS---LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           A  L  EM  +    L+ DV  +  +I  L+++G+++   +L   M  +K   S FT + 
Sbjct: 262 ASMLLKEMETQGGGCLLNDVT-YNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNP 319

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI  L + G +       +E  ++       P  V Y AII  L    Q+  A   F++M
Sbjct: 320 LITALLERGFVQKVEALQMEMENEG----IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           R+  L PD  TY +ML G  +A  + + + LL D+ + G+ P  +    ++ GY   G L
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435

Query: 560 KSAFRCSEFLKES 572
           + A R  E + E 
Sbjct: 436 EEARRLKEEMVEQ 448


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 239/461 (51%), Gaps = 4/461 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N +L+ L+    + +V   +++    G+  D+ T  +LI+C C Q  +  A ++
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  ++ +G  P  +    LI GLC   ++ +A      +   G   +  +Y  L++G CK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +         ++  H+++P+VV +  +++ LCK   L  A + +  M   G+ P++  
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI G C  G+L EA SL +EM+   I+P+V T+NILI  L   G+++ A+ LL  M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K  I  +V TYNSLIDGY    +++ A  V   M ++GV P+V  ++++I+G CK   +D
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ EM  K+++PD+V + +LIDGL K+ +++  + L K M E  I P V++ + L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL K+GR+ +A   F     K   GY    H  Y  +I  LC  G   +A  L S M  
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAK---GYHLNVHA-YTVLINRLCKAGFFDEALDLKSKMED 470

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
               PD  T+  ++R L           +L +MI  G++ +
Sbjct: 471 KGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 221/420 (52%), Gaps = 4/420 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           ++LF +    GI P +   +ILI+  C++  +  A S+F ++ + G  PN  T N L+ G
Sbjct: 77  ISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKG 136

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C   ++ +AL F+ +++    Q + V++G L++GLCK GE +A       +    V P+
Sbjct: 137 LCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPD 196

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + +YN +I+  CK   L +A  + SEM    ISPDV TY  LI G C +G L+ A  LL 
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M  + I  NV T+N LID   KEG M++A  + + M +  ++P+V T++SLIDG     
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A  ++  M  + + PDV  +T +I+GL K   + E + L++EM    + P + T +
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           SLI GL KN  +  A+   L K  K  G    P+   Y  ++  LC  G++  A ++F  
Sbjct: 377 SLIDGLCKNHHLERAIA--LCKRMKEQG--IQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           + +     +   YT ++  L +A    + + L + M   G +PDAV   +++R   E  +
Sbjct: 433 LLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 235/460 (51%), Gaps = 10/460 (2%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           P F+   F+ ++ +     H    + ++++ E   + P +   + L+N    +      +
Sbjct: 56  PTFH---FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAF 112

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +  ++  G   + +T   LI   C +G++ KAL   D+++ +G +   V Y  LI+GL
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +      + R +    V P++  YN +++  CK   +  A + Y EM+   + P+V
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 232

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ G C +G L+ A +    M    + PN+  +N LID   K G + EA  L + 
Sbjct: 233 VTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAV 292

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M K  I PDVFTYN LI G   V +++ A+ +   M + G+  +V  Y ++I+G CK   
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A+S+  +M  K + P++VT++SLIDG CK  +++ A+ L   M  + + PDV  +T 
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+DGL K G +++   +++ +L      +V   + LI+ L K G    AL+    K+   
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL---KSKME 469

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           D G C P+ V +  II+AL    +  KA K+  +M +  L
Sbjct: 470 DKG-CMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 187/347 (53%), Gaps = 3/347 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    + G  +    + RK+E   V P +   N ++N L K        + Y EM+
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           + G+  DVVTY  LI   C  G + +A +L +EM  K I P V  + ILI  L  E KM 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +   M +  + P+++TYN+L+DGY  V +V  A   ++ M    + P+V  +  ++
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK   +  A + F  M    + P+I  YN LIDG CK  +L  A++LC  M++  I 
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV++Y IL+ GLC  G+LE A+ + Q++  +G   NV  Y  LI+  CK G  ++AL +
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            S+M +KG  P+ VTF  +I    +    D A  +  EM+ + L+ +
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 4/376 (1%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P  + +N ++            +  + +   + + P++ T  +L++  C    +  A + 
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F ++ K G  PN    N LI G C  G + +A+    ++       D  +Y  LI GLC 
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+ +    LL+K+    +  +VV YN++I+  CK   +  A  V S+M  KG+ P+VVT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +++LI G C  G++  A  L  EM +K++ P+V  F  LID LSK+G MKE   L   M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +A I P VFT +SLI G F    + +A   F     +      +P+   Y  +I  LC  
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG----VTPDVQCYTNMINGLCKT 350

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
             + +A  LF +M+  N+ PD  TY +++ GL +   +   + L   M + GI PD    
Sbjct: 351 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSY 410

Query: 547 QVMVRGYQENGDLKSA 562
            +++ G  ++G L+ A
Sbjct: 411 TILLDGLCKSGRLEDA 426



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P    F++++       +    + L+ +     + PD+   + LI+      ++     +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  +L+    P+  T+++LI GL   G I  AL F     D+        + V Y  +I 
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFH----DQLVAQGFQLDQVSYGTLIN 170

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G+    ++L   +   +++PD   Y T++  L + K + D   + ++MI  GI P
Sbjct: 171 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISP 230

Query: 542 DAVINQVMVRGYQENGDLKSAF 563
           D V    ++ G+   G LK AF
Sbjct: 231 DVVTYTTLIHGFCIMGHLKEAF 252


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 247/527 (46%), Gaps = 48/527 (9%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+++ CN +L  L      +     YE M+  G++  V+T+  ++D C   GD+ +   
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           ++ EM  + IE + V Y ILI+G     KM EA      MR  G     Y++N L++GYC
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K    + A     EML+  + P   T+ + +  LC  G +  A      MA     P++ 
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G+ K G   EA  L  ++   +I P + TYN LI GLC  G LEGA+ L ++M
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             + I  +V+TY +L+ G+ K G++  A  V  +M  KG++P+   +++   G+ + G+ 
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495

Query: 381 DAAMGLYTEMVIKS------------------------------------LVPDVVVFTA 404
           D A  L+ EMV                                       LVPD V +T 
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I G  ++G  K    LY EML  ++ PSV T   LI+G  K GR+  A  +  E   + 
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PN + + A++  +C  G I +A +    M  + + P+  +YT ++      ++ 
Sbjct: 616 ----VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +V+ L  +M+   I PD   ++ + +  +++ + +      EFL+ 
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV----EFLER 714



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 226/430 (52%), Gaps = 7/430 (1%)

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F++MI KG  P+V    I++  L +   M +A +++ +M E G++P + T+N ++D   K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D+ R  + + EM   N++ + VT+ +L++G  K G++  A  F   M + G     + 
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LI+G+CK G   +A  +  EM    I P   TYNI I  LC  G+++ A  LL  M 
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
                 +VV+YN+L+ GY K G   +A  +   +    + P++VT+++LIDG C++GN++
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EM  + + PDV+ +T L+ G  K+GN+     +Y EML   I P  +  ++  
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G    A     E+   TD  + +P+  +Y   I  LC  G ++KA +    +  
Sbjct: 487 VGELRLGDSDKAFRLH-EEMVATD--HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L PD+ TYTT++RG L   +      L  +M++  + P  +   V++ G+ + G L+ 
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603

Query: 562 AFRCSEFLKE 571
           AF+ S  +K+
Sbjct: 604 AFQYSTEMKK 613



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 240/522 (45%), Gaps = 47/522 (9%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV------------ 154
           +E+M+  G +  V    +++        + KA  +++ MI+ GI PTV            
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 155 -----------------------VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                                  V Y ILI+G     KM EA      MR  G     Y+
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++GYCK    + A     EML+  + P   T+ + +  LC  G +  A      MA
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                P++  YN L+ G+ K G   EA  L  ++   +I P + TYN LI GLC  G LE
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           GA+ L ++M  + I  +V+TY +L+ G+ K G++  A  V  +M  KG++P+   +++  
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486

Query: 372 DGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
            G+ + G+ D A  L+ EMV      PD+ ++   IDGL K GN+ + +   +++    +
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P   T +++I G  +NG+   A N + E   K       P+ + Y  +I      G++ 
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR----LYPSVITYFVLIYGHAKAGRLE 602

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +  ++M+   +RP+  T+  +L G+ +A  + +    L  M + GI P+     +++
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
               +N D +      +  KE      E +G+T R+   HL+
Sbjct: 663 ---SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 200/397 (50%), Gaps = 8/397 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +F+   ++ LI  FS+ G +EEA   +   R+        + N L+ G  K+G FD  W 
Sbjct: 270 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G+     TY + I   C  G +  A  L   M      P VV Y  L+HG  
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYI 385

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              K VEA  +F  +R   + P++ TYN L+DG C+  ++  A     EM    + P+V+
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G  K G L  A   +  M + G+ P+ + Y     G  + G+  +A  L  EM
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505

Query: 286 EKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
              +  +PD+  YN+ I GLC VG L  A    +K+++ G++ + VTY ++I GY + G 
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A ++  +M  K + P+V+T+  LI G  KAG ++ A    TEM  + + P+V+   A
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           L+ G+ K GN+ E  R   +M E  I P+ ++ + LI
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S ++  I A  + G I++A  +   +   P + + N L++G IK GKF      ++++  
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSMAA-PDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 402

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +   +VTY  LID  C  G++  A  L +EM  + I P V+ YT L+ G      +  
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML---HHNLQPNVVTFGV 229
           A  ++  M   G+ P+ Y Y     G  ++ D ++A   + EM+   HH   P++  + V
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH--APDLTIYNV 520

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            +DGLCKVG L  A  F   + + G+ P+   Y  +I G+ + G    A +L  EM +  
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P V TY +LI G    G+LE A     +M K G+  NV+T+N+L+ G CK G++++A 
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               +M E+G+ PN  +++ LI   C     +  + LY EM+ K + PD     AL   L
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700

Query: 410 SKDGNMKE 417
            KD   +E
Sbjct: 701 EKDHESRE 708


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 232/473 (49%), Gaps = 8/473 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           + + F+TL+  F E G IE AL V  K+      P     N L+NG  K G+ +    + 
Sbjct: 229 DETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI 288

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++ +  G   D VTY   + C C  G V  AL + D M+ +G +P V  Y  +I+ L   
Sbjct: 289 QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 348

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EA+ +   M + G +P+  T+N L+   C    +  AL+   E+    L P+V TF
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++ LCKVG+       F  M   G  P+   YN LID  C  G L  A+ L  EME 
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                   TYN +I  LC   ++E AE +  +M   GI  + VT+N+LIDG CK   ++ 
Sbjct: 469 NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM ++G++P+ +T++S++   CK G++  A  +   M       DVV +  LI+
Sbjct: 529 ATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLIN 588

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K G  +  L+L + M    I P+    + +I  LF+   + +AL+ F E T+  +  
Sbjct: 589 GLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGE-- 646

Query: 468 YCSPNHVLYAAIIQALCYDGQILK-ASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              P+ + Y  + + LC  G  +K A     +M +    P+  ++  +  GLL
Sbjct: 647 --PPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 697



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 245/528 (46%), Gaps = 19/528 (3%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE-- 79
           N+L       +  SV+N +    I    P V   +TLI A      +  A+ +  ++   
Sbjct: 168 NVLAEGSRMKLLESVYNEMTDRGI---QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH 224

Query: 80  -VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
            V P       L+ G I++G  ++      +M+  G     VT  VLI+  C  G V  A
Sbjct: 225 AVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDA 284

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L    + I  G EP  V Y   +H LC    +  A  +   M + G  P+++TYN +++ 
Sbjct: 285 LGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 344

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             K  +++ A    ++M+     P+  TF  L+  LC    L  A +    +   G+ P+
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           ++ +N LI+  CK G+    + L  EM+    +PD  TYNILI  LC +G+L  A  LL+
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   G   + VTYN++ID  CK+  +E+A  V  QM   G+  + VTF++LIDG CKA 
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ID A  L  +MV + L P  + + +++    K G++K+   + + M        V T  
Sbjct: 525 RIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYG 584

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI+GL K GR   AL     +  +  G    P    Y  +IQ+L     +  A  LF +
Sbjct: 585 TLINGLCKAGRTQVALKLL--RGMRIKG--IRPTPKAYNPVIQSLFRRNNLRDALSLFRE 640

Query: 499 MRSDNLRPDNCTYTTMLRGLLRA----KRMLDVMMLLADMIKMGIVPD 542
           M      PD  TY  + RGL R     K   D    L +M+  G +P+
Sbjct: 641 MTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD---FLVEMVNKGFMPE 685



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 260/559 (46%), Gaps = 12/559 (2%)

Query: 17  LIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR 76
           +++   E+  + R+       V N LN+  + + + +V++ L+   +E   ++    VY 
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVRNQLNTFGV-QADTAVYNHLLNVLAEGSRMKLLESVYN 184

Query: 77  KIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG 133
           ++    + P +   N L+  L +  +  +     EEM    +  D  T+  L+     +G
Sbjct: 185 EMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEG 244

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
            +  AL +  +M++ G  PT V   +LI+G C   ++ +A    +     G  P+  TYN
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYN 304

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
             +   C+   V+ AL+    ML     P+V T+  +++ L K GEL  A      M   
Sbjct: 305 TFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 364

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P+   +N LI   C    L EA+ L  E+    +SPDV+T+NILI  LC VG     
Sbjct: 365 GCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLG 424

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L ++M   G   + VTYN LID  C  G +  AL +  +M   G   + VT++++ID 
Sbjct: 425 IRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDA 484

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK   I+ A  ++ +M    +    V F  LIDGL K   + +   L ++M++  + PS
Sbjct: 485 LCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPS 544

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T +S++    K G +  A +        T  G+   + V Y  +I  LC  G+   A 
Sbjct: 545 NITYNSILTHYCKQGDLKKAADIL---ETMTANGF-EIDVVTYGTLINGLCKAGRTQVAL 600

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KL   MR   +RP    Y  +++ L R   + D + L  +M ++G  PDA+  +++ RG 
Sbjct: 601 KLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGL 660

Query: 554 -QENGDLKSAFRCSEFLKE 571
            +  G +K AF   +FL E
Sbjct: 661 CRGGGPIKEAF---DFLVE 676



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 173/391 (44%), Gaps = 12/391 (3%)

Query: 193 NALMDGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           + L+    + AD   AL+  +  L   +  P+   +  ++  L   G           M 
Sbjct: 57  DRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC-SEMEKFEISPDVFTYNILIKGLCGVGQL 310
           + G      V    ++ + +     +A+ L  +++  F +  D   YN L+  L    ++
Sbjct: 117 REGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRM 176

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           +  E +  +M   GI  +VVT N+LI   C+   +  A+ +  +M+   V P+  TF++L
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G  + G+I+AA+ + T+M+     P  V    LI+G  K G +++ L   ++ +    
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 431 TPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            P   T ++ +H L +NG +S+AL   +  L++      G+  P+   Y  +I  L  +G
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE------GH-DPDVFTYNTVINCLSKNG 349

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++ +A  + + M      PD  T+ T++  L    R+ + + L  ++   G+ PD     
Sbjct: 350 ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFN 409

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           +++    + GD     R  E +K S     E
Sbjct: 410 ILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 257/516 (49%), Gaps = 11/516 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    E   + EAL ++   ++    P ++A   L++GL K G+       +
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G+V  V+TY  +I      G +  AL + + M   G  P    Y  LI+GLC++
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 371

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EAE +  +  + G  P + T+  L++GYC     + AL   ++M+    + ++  F
Sbjct: 372 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L++ L K   L+ A      ++  G+ PN+  Y  +IDG+CK+G +  A+ +   ME+
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ +TYN L+ GL    +L  A  LL KM K+GI+ NV+TY +L+ G C E D + 
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M + G++P+   ++ L D  CKAG  + A   Y+ +V K +    V +T LID
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLID 607

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G SK GN      L + M++   TP  +T S L+H L K  R++ AL    + + +  G 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR--GI 665

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C+     Y  +I  +  +G+   A +++++M S   +P   TYT  +    +  R+ D 
Sbjct: 666 KCTI--FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             L+  M + G+ PD V   +++ G    G +  AF
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 228/471 (48%), Gaps = 8/471 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L +    + +   Y ++V  GL+ D VTY  +I   C +GD+  A   F  +++
Sbjct: 152 NFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLE 211

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+EP       L+ G C   ++ +A  +F  M   G   N Y+Y  L+ G C+   V  
Sbjct: 212 GGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVRE 271

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL  +  M      PNV  F  L+ GLCK G +  A   F  M + GV P++  YN +I 
Sbjct: 272 ALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIV 331

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+ K G + +A+ +   MEK    PD +TYN LI GLC   + E AE LL    KEG   
Sbjct: 332 GYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTP 390

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            VVT+ +LI+GYC     + AL + ++M     + ++  F  LI+   K   +  A  L 
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+    LVP+V+ +T++IDG  K G +   L + K M      P+ +T +SL++GL K+
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            ++  A+   L K  K DG    PN + Y  ++Q  C +     A +LF  M  + L+PD
Sbjct: 511 KKLHKAMA-LLTKMQK-DG--IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
              Y  +   L +A R  +    +   ++ G+    V    ++ G+ + G+
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGN 614



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 237/489 (48%), Gaps = 11/489 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I ++ + G +  A   +R +    + P    CNAL+ G  + G+       +  M
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            L G   +  +Y +LI   C    V +AL LF  M   G  P V  +T LI GLC   ++
Sbjct: 245 PLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F +M + GVVP++ TYNA++ GY K+  +N AL+    M  +   P+  T+  L
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   +   A     +  K G  P +  +  LI+G+C A    +A+ + ++M   + 
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  +  LI  L    +L+ A+ LL ++   G++ NV+TY S+IDGYCK G ++ AL 
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G +PN  T++SL+ G  K   +  AM L T+M    ++P+V+ +T L+ G  
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
            + +     RL++ M +  + P     + L   L K GR   A +F + K         +
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG-------VA 596

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
              V Y  +I      G    A+ L   M  +   PD+ TY+ +L  L + KR+ + + +
Sbjct: 597 LTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPI 656

Query: 531 LADMIKMGI 539
           L  M   GI
Sbjct: 657 LDQMSLRGI 665



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 239/515 (46%), Gaps = 31/515 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN+     F P+V  F+ LI  +      ++AL +  K+   +    +Q    L+N LIK
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           K +     E   E+   GLV +V+TY  +ID  C  G V  AL +   M   G +P    
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L++GL  + K+ +A ++   M++ G++PN+ TY  L+ G C   D + A   +  M 
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + L+P+   + VL D LCK G    A +F V   + GV      Y  LIDG  KAGN  
Sbjct: 560 QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTD 616

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A +L   M     +PD +TY++L+  LC   +L  A  +L +M   GI   +  Y  LI
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D   +EG  + A  + ++MT  G +P+  T++  I+  CK G ++ A  L  +M  + + 
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDVV +  LIDG    G +       K M+ A   P+ +T   L+  L K        N 
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG-------NL 789

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
              ++  T G        ++  I   + +        +L   M    L P   TY++++ 
Sbjct: 790 AYVRSVDTSG--------MWNLIELDITW--------QLLERMVKHGLNPTVTTYSSLIA 833

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           G  +A R+ +  +LL  M   G+ P+  I  ++++
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 5/395 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G++P+  TYN ++  YCK  D+  A   +  +L   L+P   T   L+ G C+ GELR A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F+ M   G   N + Y  LI G C+A  + EA+ L   M++   SP+V  +  LI G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G++  A  L   M + G++ +V+TYN++I GY K G M  AL +   M + G  P+
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             T+++LI G C     + A  L    V +   P VV FT LI+G        + LR+  
Sbjct: 358 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+ +K    +     LI+ L K  R+  A        ++       PN + Y +II   
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL----NEISANGLVPNVITYTSIIDGY 472

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G++  A ++   M  D  +P+  TY +++ GL++ K++   M LL  M K GI+P+ 
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           +    +++G  +  D  +AFR  E ++++ +   E
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 230/528 (43%), Gaps = 31/528 (5%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +      P+V  ++++I  + + G ++ AL V + +E     P     N+L+ GL+K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K         +M   G++ +V+TY  L+   C + D   A  LF+ M   G++P    
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +L   LC   +  EA S    +R+ GV      Y  L+DG+ K  + + A      M+
Sbjct: 570 YAVLTDALCKAGRAEEAYSFI--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P+  T+ VL+  LCK   L  A      M+  G+   IF Y  LID   + G   
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  + +EM      P   TY + I   C  G+LE AE L+ KM +EG+  +VVTYN LI
Sbjct: 687 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG    G +++A S   +M     EPN  T+  L+    K GN+     + T  +   + 
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIE 805

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D+                  T +L + M++  + P+V T SSLI G  K GR+  A   
Sbjct: 806 LDI------------------TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D   G   SPN  +Y  +I+  C      KA    S M     +P   +Y  ++ 
Sbjct: 848 L----DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           GL        V  L  D++++G   D V  +++  G  + G +   F+
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 951



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 197/445 (44%), Gaps = 24/445 (5%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VL 81
           L+K +K H     +        IP  N   ++TL+    +    + A  ++  +E   + 
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIP--NVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   A   L + L K G+ +  + F   +V  G+    V Y  LID     G+   A  L
Sbjct: 565 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + MID+G  P    Y++L+H LC + ++ EA  +   M   G+   ++ Y  L+D   +
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + A   Y+EM     +P+  T+ V ++  CK G L  A +  + M + GV P++  
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK----------------GLC 305
           YN LIDG    G +  A S    M      P+ +TY +L+K                G+ 
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            + +L+    LL++M K G+   V TY+SLI G+CK G +E+A  +   M  KG+ PN  
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            ++ LI   C     + A+   + M      P +  +  L+ GL  +G+ ++   L+ ++
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRI 450
           LE            L  GL K G +
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAGYV 946



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 182/410 (44%), Gaps = 22/410 (5%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEAL-WVYRKIEV 80
            LL+ +   H   + F     +E     P    ++ L  A  + G  EEA  ++ RK   
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVA 596

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L  +     L++G  K G  D      E M+  G   D  TY VL+   C Q  + +AL 
Sbjct: 597 LTKVYY-TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D+M  +GI+ T+  YTILI  +  E K   A+ M+  M   G  P+  TY   ++ YC
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A +   +M    + P+VVT+ +L+DG   +G +  A +    M      PN +
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 261 VYNCLIDGHCKAGNLFEAMS-----------------LCSEMEKFEISPDVFTYNILIKG 303
            Y CL+  H   GNL    S                 L   M K  ++P V TY+ LI G
Sbjct: 776 TY-CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 834

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G+LE A  LL  M  +G+  N   Y  LI   C     EKALS  S M+E G +P 
Sbjct: 835 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 894

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           + ++  L+ G C  G+ +    L+ +++      D V +  L DGL K G
Sbjct: 895 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 7/278 (2%)

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +SP    YN  ++ L      E    +  ++ ++G+L + VTYN++I  YCKEGD+ 
Sbjct: 143 RLALSPKC--YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLT 200

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A      + E G+EP   T ++L+ G C+ G +  A  L+  M +     +   +T LI
Sbjct: 201 TAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 260

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL +   ++E L L+  M     +P+V   + LI GL K+GR+ +A   F    D    
Sbjct: 261 QGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQ 316

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ + Y A+I      G++  A K+   M  +   PD+ TY T++ GL   K   +
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTE-E 375

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              LL + +K G  P  V    ++ GY        A R
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 16/267 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+       +N   K+G+ +   +   +M   G+  DVVTY +LID C   G + +A + 
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN----KMVEAESMF------------RSMRECGV 185
              M+    EP    Y +L+  L   N    + V+   M+              M + G+
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P + TY++L+ G+CK   +  A      M    L PN   + +L+   C       A +
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           F   M++ G  P +  Y  L+ G C  G+  +  SL  ++ +   + D   + IL  GL 
Sbjct: 882 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLL 941

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTY 332
             G ++    +L  M K     +  TY
Sbjct: 942 KAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 21/284 (7%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--- 79
           + +L+  K  H    ++N + S    K + + ++  I ++ + G +E+A  +  K+E   
Sbjct: 677 DEMLREGKHDHA-KRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC----------- 128
           V P +   N L++G    G  D  +   + MV      +  TY +L+             
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 129 --CCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
               G  ++++      L + M+  G+ PTV  Y+ LI G C   ++ EA  +   M   
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ PN   Y  L+   C      +AL F   M     QP + ++ +L+ GLC  G+    
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            + F  + + G   +   +  L DG  KAG +     + S MEK
Sbjct: 915 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 218/389 (56%), Gaps = 8/389 (2%)

Query: 32  HHVCYS--VFNALNSL-EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAI 84
            H+C +     AL  L ++P+ N   ++T+I  F   G ++ AL V R++     + P  
Sbjct: 124 RHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK 183

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFD 143
                L++G  K G+ +   + ++EM+  G VA   V Y  LI   C  G +  AL   +
Sbjct: 184 YTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRE 243

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M+ +GI  TV  Y +L+H L  + +  +A ++   M++ G  P+++TYN L++GYCK  
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +  +ALE + EM    ++   VT+  L+    + G+++     F    K G+ P++ +YN
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI+ HC  G++  A  + +EMEK  I PD  TYN L++G C +G+L+ A  L+ +M K 
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           GI  ++V+YN+LI GY  +GD++ AL V  +M +KG  P ++T+++LI G CK    D A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             L  EMV K + PD   + +LI+GL+ +
Sbjct: 484 ENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 237/474 (50%), Gaps = 19/474 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFY 107
           +PS+   L+ A +       +L +Y +++ L     + + + LL+ L     F    + Y
Sbjct: 49  SPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAPAFALFADIY 108

Query: 108 E-EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              + LC       T+ +++   C  G  ++AL L  +M      P  V Y  +I G C 
Sbjct: 109 RLRLPLC-----TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCA 159

Query: 167 ENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
             ++  A  + R MRE  G+ P+ YTY  L+ G+CK+  +  A++ + EML    + P+ 
Sbjct: 160 RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSA 219

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +  L+ G C VG+L  A  +   M + G+   +  YN L+          +A ++  E
Sbjct: 220 VMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEE 279

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+K   SPDVFTYNILI G C  G  + A  + ++M ++G+ A  VTY SLI  + ++G 
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++   + +   +KG+ P+VV +++LI+  C  G+++ A  +  EM  K + PD + +  
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+ G    G + E   L  EM +  I P + + ++LI G    G I +AL    E  DK 
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK- 458

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             G+ +P  + Y A+IQ LC   Q   A  L  +M +  + PD+ TY +++ GL
Sbjct: 459 --GF-NPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 224/461 (48%), Gaps = 12/461 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA 89
           +PH     ++  L SL +P    +    L+ +            +YR + +       N 
Sbjct: 64  RPHATSLRLYAQLKSLSVP-IPVASLHPLLSSLPSAPAFALFADIYR-LRLPLCTTTFNI 121

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L  L   GK     E   +M       + VTY  +I   C +G V  AL +  EM ++G
Sbjct: 122 MLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERG 177

Query: 150 -IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNR 207
            I P    Y  LI G C   +M +A  +F  M   G V P+   YNAL+ GYC V  ++ 
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL++  +M+   +   V T+ +LM  L        A      M K G  P++F YN LI+
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK GN  +A+ +  EM +  +     TY  LI      GQ++  + L     K+GI  
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VV YN+LI+ +C  GDME+A  + ++M +K + P+ +T+++L+ G C  G +D A  L 
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + + PD+V +  LI G S  G++K+ LR+  EM++    P++ T ++LI GL K 
Sbjct: 418 DEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKI 477

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            +  +A N   E   K      +P+   Y ++I+ L  + +
Sbjct: 478 RQGDDAENLMKEMVAKG----ITPDDSTYISLIEGLTTEDE 514



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 198/407 (48%), Gaps = 10/407 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF ++    +      + I++  LC   K V A  + R M      PN  TYN ++ 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 198 GYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG-V 255
           G+C    V  ALE   EM     + P+  T+  L+ G CK+G +  A   F  M   G V
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+  +YN LI G+C  G L  A+    +M +  I+  V TYN+L+  L    +   A  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +L++M K G   +V TYN LI+GYCKEG+ +KAL V  +M++KGV    VT++SLI    
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           + G +     L+   V K + PDVV++ ALI+     G+M+    +  EM + +I P   
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDM 395

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++L+ G    GR+  A     E T +       P+ V Y  +I      G I  A ++
Sbjct: 396 TYNTLMRGFCLLGRLDEARTLIDEMTKRG----IQPDLVSYNTLISGYSMKGDIKDALRV 451

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
             +M      P   TY  +++GL + ++  D   L+ +M+  GI PD
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPD 498



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 10/362 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + ++    L     TF +++  LC  G+   A      M +    PN   YN +I 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           G C  G +  A+ +  EM E+  I+PD +TY  LI G C +G++E A  +  +M  +G +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 327 A-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           A + V YN+LI GYC  G ++ AL     M ++G+   V T++ L+           A  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           +  EM      PDV  +  LI+G  K+GN K+ L +++EM +  +  +  T +SLI+   
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           + G++      F     K       P+ V+Y A+I + C  G + +A ++ ++M    + 
Sbjct: 336 RKGQVQETDRLFNVAVKKG----IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD+ TY T++RG     R+ +   L+ +M K GI PD V    ++ GY   GD+K A R 
Sbjct: 392 PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451

Query: 566 SE 567
            +
Sbjct: 452 RD 453



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 190/402 (47%), Gaps = 10/402 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           +V I    +H L +      A ++F  +    +     T+N ++   C      RALE  
Sbjct: 80  SVPIPVASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELL 139

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M     +PN VT+  ++ G C  G ++AA      M  + G+ P+ + Y  LI G CK
Sbjct: 140 RQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCK 195

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + +A+ +  EM  K E++P    YN LI G C VG+L+ A    + M + GI   V 
Sbjct: 196 IGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVA 255

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN L+     +     A +V  +M + G  P+V T++ LI+G CK GN   A+ ++ EM
Sbjct: 256 TYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEM 315

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K +    V +T+LI   S+ G ++ET RL+   ++  I P V   ++LI+     G +
Sbjct: 316 SQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDM 375

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K       P+ + Y  +++  C  G++ +A  L  +M    ++PD  +
Sbjct: 376 ERAYEIMAEMEKKR----IPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVS 431

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           Y T++ G      + D + +  +M+  G  P  +    +++G
Sbjct: 432 YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 169/319 (52%), Gaps = 13/319 (4%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A +L +++ +  +     T+NI+++ LC  G+   A  LL++M +     N VTYN++I 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++ AL V  +M E+G + P+  T+++LI G CK G ++ A+ ++ EM+ K  V
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P  V++ ALI G    G +   L+  ++M++  I  +V T + L+H LF + R S+A  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             LE+  K   G+ SP+   Y  +I   C +G   KA ++F +M    +R    TYT+++
Sbjct: 276 V-LEEMQK--NGF-SPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
               R  ++ +   L    +K GI PD V+   ++  +   GD++ A+     +++ RI 
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391

Query: 576 SSETEGHT-TRSF--LGHL 591
             +   +T  R F  LG L
Sbjct: 392 PDDMTYNTLMRGFCLLGRL 410


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 248/496 (50%), Gaps = 8/496 (1%)

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           F  +  +++A  ++R++   + LP++ + + LL  L+    + SV   + E+    +   
Sbjct: 47  FENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVH 106

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                ++++ CC         ++      KGI    VI+  L+ GL  ENK+ +A  +F+
Sbjct: 107 EFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFK 166

Query: 179 SM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            + RE    PN   Y  +M+G CK     +A +    M   + +PN   + +++D  CK 
Sbjct: 167 KLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKD 226

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A +    M +  + P+IF Y+ LID  CK        +L  EM    I P+V T+
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N +I GLC  G++E AE +++ M ++G+  +V+TYN +IDGY   G +++A  +   M  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K +EPN+++++ LI+G  +   ID AM +  E+  K L P +V    L+ GL + G  K 
Sbjct: 347 KSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKS 406

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
               + EML A   P ++T  +L+ G FKNG +  A++ F +   + +      N  +Y 
Sbjct: 407 AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE----DTNIQIYT 462

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC +G++ KA   F  +    L PD  TYT M+ G  +   + +   +L  M   
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522

Query: 538 GIVPDAVINQVMVRGY 553
           G + D     V+VRG+
Sbjct: 523 GCLADNRTYNVIVRGF 538



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 233/464 (50%), Gaps = 5/464 (1%)

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D  +  + +MV    +  VV++  L+            ++LF E+    I     I +I
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++  C  ++     S+     + G+  N   +N L+ G      V  A+  + +++  N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 220 L-QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           + +PN V +G +M+GLCK G  + A +    M +    PN  +Y+ +ID  CK G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            SL +EM++  I PD+FTY+ LI  LC + Q E    L  +M    I  NV T+NS+IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CKEG +E A  +   M EKGV+P+V+T++ +IDG    G +D A  ++  M+ KS+ P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           ++ +  LI+G ++   + E +++ +E+ +  + PS+ T + L+HGLF+ GR  +A NFF 
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E       G+  P+   +  ++     +G + +A   F  +       +   YT ++ GL
Sbjct: 413 EMLS---AGHI-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  ++         +  +G+ PD +    M+ GY + G L  A
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 218/423 (51%), Gaps = 7/423 (1%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFD 101
           IP FN  +F+TL+        +++A+ +++K+ V   I   N      ++NGL KKG   
Sbjct: 138 IP-FNQVIFNTLLRGLFAENKVKDAVHLFKKL-VRENICEPNEVMYGTVMNGLCKKGHTQ 195

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             ++    M       +   Y ++ID  C  G +  A +L +EM  K I P +  Y+ LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC  ++     ++F  M    + PN+ T+N+++DG CK   V  A E    M+   + 
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+T+ +++DG    G++  A   F  M    + PNI  YN LI+G+ +   + EAM +
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           C E+ +  + P + T N+L+ GL  +G+ + A+    +M   G + ++ T+ +L+ GY K
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+A+S   ++  +  + N+  ++++IDG CK G +D A   + ++ +  L PDV+ 
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +TA+I G  ++G + E   + ++M +        T + ++ G  ++ ++S    F  E  
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA 555

Query: 462 DKT 464
            K+
Sbjct: 556 GKS 558



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 200/370 (54%), Gaps = 3/370 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  ++S +I AF + G ++ A  +  +++   + P I   + L++ L K  ++++V  
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM+   +  +V T+  +ID  C +G V  A  +   MI+KG++P V+ Y ++I G  
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++  A  +F SM    + PN+ +YN L++GY +   ++ A++   E+    L+P++V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  VL+ GL ++G  ++A NFF  M   G  P+++ +  L+ G+ K G + EAMS   ++
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+     ++  Y  +I GLC  G+L+ A    +K+   G+  +V+TY ++I GYC+EG +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +  +M + G   +  T++ ++ G  ++  +        E+  KS   +      L
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 406 IDGLSKDGNM 415
           +D +++D ++
Sbjct: 570 MDIIAEDPSL 579



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 203/429 (47%), Gaps = 3/429 (0%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +F  L    I + N  ++ T++    + GH ++A  + R +E     P     + +++  
Sbjct: 164 LFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAF 223

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K G  D       EM    +  D+ TY  LID  C          LF EMI   I P V
Sbjct: 224 CKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNV 283

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             +  +I GLC E K+ +AE + R M E GV P++ TYN ++DGY     V+RA E +  
Sbjct: 284 CTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDS 343

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M++ +++PN++++ +L++G  +  ++  A      +++ G+ P+I   N L+ G  + G 
Sbjct: 344 MINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGR 403

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A +   EM      PD++T+  L+ G    G +E A     K+ +     N+  Y +
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +IDG CK G ++KA +   ++   G+ P+V+T++++I G C+ G +D A  +  +M    
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            + D   +  ++ G  +   + E     +E+     +    TV  L+  + ++  + N +
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMI 583

Query: 455 NFFLEKTDK 463
             F     K
Sbjct: 584 PEFHRDNKK 592



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 199/418 (47%), Gaps = 15/418 (3%)

Query: 163 GLCNENKMV----EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           G+ NE + V    +A S+FR M     +P++ +++ L+     +   +  +  + E+  H
Sbjct: 42  GVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREI--H 99

Query: 219 NLQPNVVTF--GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            L+  V  F   ++++  C +       +      K G+  N  ++N L+ G      + 
Sbjct: 100 KLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVK 159

Query: 277 EAMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           +A+ L  ++ +  I  P+   Y  ++ GLC  G  + A  LL+ M +     N   Y+ +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID +CK+G ++ A S+ ++M +K + P++ T+S+LID  CK    +    L+ EM+  ++
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+V  F ++IDGL K+G +++   + + M+E  + P V T + +I G    G++  A  
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRARE 339

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    +K+      PN + Y  +I       +I +A ++  ++    L+P   T   +L
Sbjct: 340 IFDSMINKS----IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            GL    R         +M+  G +PD   +  ++ GY +NG ++ A   S F K  R
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM--SHFHKLER 451



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 134/295 (45%), Gaps = 15/295 (5%)

Query: 288 FEISPDVFTYN---ILIKGLCGVGQ-------LEGAEGLLQKMYKEGILANVVTYNSLID 337
           + I+P  ++ N   I +KG  GV         L+ A  L ++M +   L +VV+++ L+ 
Sbjct: 21  YSIAPRHYSTNTRSISVKGNFGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLK 80

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
                      +S+  ++ +  +  +    S +++  C     D    +      K +  
Sbjct: 81  ALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPF 140

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNF 456
           + V+F  L+ GL  +  +K+ + L+K+++   I  P+     ++++GL K G    A + 
Sbjct: 141 NQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                   + G   PN  +Y+ +I A C DG +  A+ L ++M+  ++ PD  TY+T++ 
Sbjct: 201 L----RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            L +  +  +V  L  +MI + I P+      ++ G  + G ++ A     ++ E
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 245/502 (48%), Gaps = 8/502 (1%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  E+A   L   R+   +P++ + N++L  L KK K D     +E M
Sbjct: 55  AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 114

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +  TY ++ID  C  G V +A  + DEM    + P ++   I++  LC   K+
Sbjct: 115 KK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 173

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F S  + G  P+  TY +L+DG  K   V+ A   + +ML      N V +  L
Sbjct: 174 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +      G        F  + + G  P++ + N  +D   KAG + +   +  ++  +  
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV +Y+ILI GL   GQ      +   M ++G   +   YN+++DG+CK G + KA  
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 353

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EK V+P V T+ +++DG  K   +D A  L+ E   K +  +VV++++LIDG  
Sbjct: 354 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 413

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +EM++  +TP+V+T +SL+  L K   I+ AL  F    +      C 
Sbjct: 414 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK----CP 469

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y+ +I  LC   +  KA   + DM+   L P+  TYTTM+ GL +   + D   L
Sbjct: 470 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 529

Query: 531 LADMIKMGIVPDAVINQVMVRG 552
                  G +PDA     ++ G
Sbjct: 530 FERFKANGGIPDAASFNALIEG 551



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 242/474 (51%), Gaps = 12/474 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           S+F  +     P  N S ++ +I      G +EEA  +  ++E   + P +   N +++ 
Sbjct: 109 SLFEVMKKDAEP--NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 166

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  K +  ++ +E     G   D VTY  LID    +G V +A  LF++M+D G    
Sbjct: 167 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 226

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V+YT LI       +  +   +F+ +   G  P+L   N  MD   K  +V +    + 
Sbjct: 227 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 286

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           ++  +   P+V ++ +L+ GL K G+ R   N F  M + G   +   YN ++DG CK+G
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 346

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + +A  +  EM++  + P V TY  ++ GL  + +L+ A  L ++   +GI  NVV Y+
Sbjct: 347 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 406

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           SLIDG+ K G +++A  +  +M +KG+ PNV T++SL+D   KA  I+ A+  +  M   
Sbjct: 407 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 466

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              P+   ++ LI+GL +     +    +++M +  + P+V T +++I GL K G I++A
Sbjct: 467 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 526

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK---LFSDMRSDNL 504
            + F  +  K +GG   P+   + A+I+ +    + ++A +   L + MR D L
Sbjct: 527 YSLF--ERFKANGGI--PDAASFNALIEGMSNANRAMEAYQAGWLDTTMRLDCL 576



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 241/519 (46%), Gaps = 8/519 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++++I    + G + EA  ++ ++E    +P   A N ++ G    G+F+  ++  E + 
Sbjct: 21  YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 80

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G +  VV++  ++ C   +  V +AL+LF E++ K  EP    Y I+I  LC   ++ 
Sbjct: 81  ERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVE 139

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M    + PNL T N ++D  CK   +  A + +         P+ VT+  L+
Sbjct: 140 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 199

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGL K G++  A   F  M   G   N  VY  LI      G   +   +  E+ +    
Sbjct: 200 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCK 259

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+   N  +  +   G++E    + + +   G L +V +Y+ LI G  K G   +  ++
Sbjct: 260 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 319

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M ++G   +   +++++DG CK+G +  A  +  EM  K + P V  + A++DGL+K
Sbjct: 320 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 379

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + E   L++E     I  +V   SSLI G  K GRI  A     E   K      +P
Sbjct: 380 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG----LTP 435

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   + +++ AL    +I +A   F  M+     P+  TY+ ++ GL R ++     +  
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            DM K G+VP+ V    M+ G  + G++  A+   E  K
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 534



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 225/471 (47%), Gaps = 5/471 (1%)

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
            W+F+ E+   GL  D V+Y  +I   C  G + +A  LF +M  +   P    Y  +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G  +  +  +A  +   +RE G +P++ ++N+++    K   V+ AL  + E++  + +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N  T+ +++D LC  G +  A      M    +FPN+   N ++D  CKA  L EA  + 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
               +   +PD  TY  LI GL   GQ++ A  L +KM   G  AN V Y SLI  +   
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G  E    +  ++  +G +P++   ++ +D   KAG ++    ++ ++     +PDV  +
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + LI GL+K G  +ET  ++  M +          ++++ G  K+G++  A     E  +
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K       P    Y AI+  L    ++ +A  LF + +S  +  +   Y++++ G  +  
Sbjct: 361 KC----VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           R+ +  ++L +M+K G+ P+      ++    +  ++  A  C + +KE +
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 240/463 (51%), Gaps = 14/463 (3%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA-IQAC-----NALLNGLIKKGKFD 101
           P+   + +  L+  +   G +E+A    R +  +PA +QA      N L++ L ++G+  
Sbjct: 124 PEATAATYGALVDGYCRAGLLEDA---RRVVGGMPAHVQASSAYAHNPLIHALCERGRVA 180

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                 + M+  G   DVVTY +L+   C      +AL L D M  +G EP  V Y ++I
Sbjct: 181 DALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVII 240

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             +C E  + +A  +  S+   G  PN   YN ++ G+C +     A E   EM+  N  
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PN  T  V+++ LC+ G L+    +   M+K G   N+  YN +I G C+ GN+  A+ L
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            S M+ F   PD+ TYN ++KGLC   + E AE L+ KM +   L +  T+N++I  +C+
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           +G + +A  V  QM EKG  PN  T+S++I G  KAG ++ A+ L  EM  K    D  +
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KM 479

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  L + L+K+  ++E +++  ++ ++ I+P     ++++ GL +NG+   A++      
Sbjct: 480 YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVL---A 536

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           D    G C P+   Y  +I+ L Y+G   +A +L S + S ++
Sbjct: 537 DMVSCG-CMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 235/502 (46%), Gaps = 8/502 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A    G ++ AL +       P +   N L+  L ++G+        E    CG  A   
Sbjct: 73  ALIHRGDLDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEA---CGPEATAA 129

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TYG L+D  C  G +  A  +   M       +   +  LIH LC   ++ +A  +   M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G  P++ TYN L+   CK     +ALE    M     +PN VT+ V++D +C+ G++
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      +   G  PN   YN ++ G C      +A  +  EM +    P+  T N++
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC  G L+     L+KM K G  ANVVTYN++I G C++G+++ AL + S M   G 
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +P++VT+++++ G C A   + A  L  +M     +PD   F  +I    + G + +   
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           ++K+M E    P+  T S++I GL K G++  AL    E  +K   G+ +    +Y  + 
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK---GFNTDK--MYRVLT 484

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           ++L  + +I +  ++   ++   + P    Y T+L GL R  +    + +LADM+  G +
Sbjct: 485 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCM 544

Query: 541 PDAVINQVMVRGYQENGDLKSA 562
           PD     +++ G    G  K A
Sbjct: 545 PDESTYIILIEGLFYEGYSKEA 566



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 173/382 (45%), Gaps = 10/382 (2%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V     L+  LC+ G    A      +   G       Y  L+DG+C+AG L +A  +
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARV---VEACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M     +   + +N LI  LC  G++  A  +L  M   G   +VVTYN L+   CK
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
                +AL +   M  +G EPN VT++ +ID  C+ G++D A  L   +  +   P+ V 
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  ++ G        +   +  EM+     P+  T++ +I+ L + G +   +  +LEK 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQK-VTLYLEKM 329

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K     C+ N V Y A+I  +C  G +  A +L S+M+S   +PD  TY T+L+GL  A
Sbjct: 330 SKHG---CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSA 386

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
            R  D   L+  M +   +PD      ++  + + G +  AF   + + E     + T  
Sbjct: 387 DRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNST-- 444

Query: 582 HTTRSFLGHLKPTVYKEQDLSI 603
            T  + +G L      EQ L +
Sbjct: 445 -TYSTIIGGLTKAGKMEQALEL 465



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 6/327 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQAC-NALLNGLIK 96
           LNSL      P+   ++T++  F  +    +A  +  ++  E  P  +A  N ++N L +
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR 315

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG    V  + E+M   G  A+VVTY  +I   C QG+V  AL L   M   G +P +V 
Sbjct: 316 KGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVT 375

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  ++ GLC+ ++  +AE +   M +   +P+  T+N ++  +C+   + +A E + +M 
Sbjct: 376 YNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMP 435

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                PN  T+  ++ GL K G++  A      MA  G F    +Y  L +   K   + 
Sbjct: 436 EKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG-FNTDKMYRVLTESLNKEDKIE 494

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           E + +  +++   ISP    YN ++ GLC  G+ + A  +L  M   G + +  TY  LI
Sbjct: 495 EVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPN 363
           +G   EG  ++A  + S++  + V  N
Sbjct: 555 EGLFYEGYSKEARELLSRLCSRDVLSN 581



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 37/247 (14%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    E G+++ AL +   ++     P I   N +L GL    +++   E   +M
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                + D  T+  +I   C +G +++A  +F +M +KG  P    Y+ +I GL    KM
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459

Query: 171 VEA--------------ESMFR--------------------SMRECGVVPNLYTYNALM 196
            +A              + M+R                     +++ G+ P    YN ++
Sbjct: 460 EQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVL 519

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C+    + A++   +M+     P+  T+ +L++GL   G  + A      +    V 
Sbjct: 520 LGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVL 579

Query: 257 PNIFVYN 263
            N  + N
Sbjct: 580 SNSLIKN 586


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/513 (30%), Positives = 251/513 (48%), Gaps = 10/513 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR-KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           N + F+TLI +F+    IE  L +   ++   P     N  LN L++  K   V   + +
Sbjct: 89  NATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSK 148

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+V DV T+ VLI   C    +  A+ + +EM + G++P  + +T L+ G   E  
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  M + M   G +    +   L++G+CK   V  AL F  E+      P+ VTF  
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++G C++G +  A +    M + G  P+++ YN LI G CK G   +A+ +  +M   E
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            SP+  TYN LI  LC   ++E A  L + +  +G+L +V T+N+LI G C   + + A+
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAM 388

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M  KG +P+  T+S LID  C    +  A+ L  EM       + VV+  LIDGL
Sbjct: 389 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   +++   ++ +M    ++ S  T ++LI GL KN R+  A        D+      
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLM----DQMIMEGL 504

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+   Y +++   C  G I KA  +   M S+   PD  TY T++ GL RA R+     
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 530 LLADMIKMGIV--PDA---VINQVMVRGYQENG 557
           LL  +   GIV  P A   VI  + +R   + G
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEG 597



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 252/494 (51%), Gaps = 8/494 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S F+ LI A  +   +  A+ +  ++    + P       L+ G I++G  +   +  ++
Sbjct: 159 STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQ 218

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G +   V+  VL++  C +G V +AL    E+ ++G  P  V +  L++G C    
Sbjct: 219 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +   M E G  P++YTYN+L+ G CK+ +  +A+E   +M+     PN VT+  
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  LCK  E+ AA +    +   G+ P++  +N LI G C + N   AM +  EM+   
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD FTY+ILI  LC   +L+ A  LL++M   G   N V YN+LIDG CK   +E A 
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  QM   GV  + VT+++LIDG CK   ++ A  L  +M+++ L PD   + +L+   
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G++++   + + M      P +FT  +LI GL + GR+  A      ++ +  G   
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL--RSVQMKGIVL 576

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR-AKRMLDVM 528
           +P+   Y  +IQAL    +  +  +LF +M   +  PD  T+  + RGL      + + +
Sbjct: 577 TPHA--YNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAI 634

Query: 529 MLLADMIKMGIVPD 542
               +M++ GI+P+
Sbjct: 635 DFTVEMLEKGILPE 648



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 227/474 (47%), Gaps = 6/474 (1%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            LL  L +   FDS+    +++   G + +  T+  LI       ++   L + +  +  
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL-- 117

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G +P    Y I ++ L  +NK+   E +   M   G+V ++ T+N L+   CK   +  A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +    EM +H L+P+ +TF  LM G  + G+L  A      M  +G          L++G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK G + EA+    E+ +   SPD  T+N L+ G C +G +  A  ++  M ++G   +
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V TYNSLI G CK G+ EKA+ +  QM  +   PN VT+++LI   CK   I+AA  L  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            +V K L+PDV  F  LI GL    N    + +++EM      P  FT S LI  L    
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           R+  AL    E     +   C+ N V+Y  +I  LC   +I  A ++F  M    +   +
Sbjct: 418 RLKEALMLLKE----MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            TY T++ GL + KR+ +   L+  MI  G+ PD      ++  +   GD++ A
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKA 527



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 234/478 (48%), Gaps = 16/478 (3%)

Query: 58  LIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+  F + G +EEAL    ++      P     N+L+NG  + G  +   +  + M+  G
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              DV TY  LI   C  G+  KA+ +  +MI +   P  V Y  LI  LC EN++  A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            + R +   G++P++ T+N L+ G C   + + A+E + EM +   +P+  T+ +L+D L
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C    L+ A      M   G   N  VYN LIDG CK+  + +A  +  +ME   +S   
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN LI GLC   ++E A  L+ +M  EG+  +  TYNSL+  +C+ GD+EKA  +   
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G EP++ T+ +LI G C+AG +D A  L   + +K +V     +  +I  L     
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSPNH 473
            KE +RL++EM+E    P   T   +  GL    G I  A++F +E  +K       P  
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG----ILPEF 649

Query: 474 VLYAAIIQALC---YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             +  + + LC    +  +++   +  +    + R      T+M+RG L+ ++  D +
Sbjct: 650 PSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE-----TSMIRGFLKIRKFNDAL 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 162/342 (47%), Gaps = 6/342 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PN  TF  L+       E+        +  + G  P+   YN  ++   +   L     L
Sbjct: 88  PNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            S+M    I  DV T+N+LIK LC   QL  A  +L++M   G+  + +T+ +L+ G+ +
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EGD+  AL +  QM   G     V+   L++G CK G ++ A+    E+  +   PD V 
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F +L++G  + GN+ + L +   M+E    P V+T +SLI G+ K G    A+    +  
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            +     CSPN V Y  +I ALC + +I  A+ L   + S  L PD CT+ T+++GL  +
Sbjct: 326 LRE----CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLS 381

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           K     M +  +M   G  PD     +++        LK A 
Sbjct: 382 KNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 258/573 (45%), Gaps = 77/573 (13%)

Query: 53  SVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           SV  TL+  F ++    EAL +    R++ + P+  A   L   L++ G   SVW+    
Sbjct: 80  SVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRG 139

Query: 110 MV------------------------------LCGLV-----ADVVTYGVLIDCCCGQGD 134
           M+                              LC +       DV  Y +LI+  C +G 
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              AL     MID G  P++V +  +I+  CN+  M+EA ++F  M+E G +PN+  YN 
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM----------------------- 231
           LM+GY K  D+ +A   Y EM    + P+  TF +L+                       
Sbjct: 260 LMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSG 319

Query: 232 ------------DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
                        GLC  G L  A  F   M + G+ P +  +N +I  + +AG   +A 
Sbjct: 320 SLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAY 379

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
                M KF + P   T + LI GL  + +L+ A  LL +M  EG+  N   +  L+DGY
Sbjct: 380 KAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGY 439

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            + GD+  A S+ ++M  +G+ P+ V FS+ I+G    G +D A  ++ +M  K  +P+ 
Sbjct: 440 FRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNN 499

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
            V+ +LI G    G ++E L L +EM    + P +FT + +I+GL K GR+ +A + F  
Sbjct: 500 FVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRN 559

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                      P+ V Y  +I   C     +   ++ + M +    PD  TY   L GL 
Sbjct: 560 MHHTG----LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLC 615

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             ++M   +M+L ++I  G+VPD V    ++ G
Sbjct: 616 TGRKMSRAVMMLEELISAGVVPDTVTYNTVMNG 648



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 5/496 (1%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            + E +W  R  E        + L+ G +K        E    M   GL        +L 
Sbjct: 63  EVVEFMW-KRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILF 121

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 GD      L   MI +G  P    +  +I G C +  +   ES+   M++    
Sbjct: 122 KLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQ 181

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++Y YN L++ YC       AL +   M+ +   P++VTFG +++  C  G +  A N 
Sbjct: 182 PDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNL 241

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + G  PN+  YN L++G+ KA ++ +A  L  EM+   ++PD  T+NIL+ G   
Sbjct: 242 FDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYR 301

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+ E  + LL+ + + G L+    YN  + G C  G +++A+     M EKG+ P VV 
Sbjct: 302 YGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVA 361

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           F+S+I    +AG  + A   Y  MV   L P  +  ++LI GLSK   ++E   L  EM+
Sbjct: 362 FNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMI 421

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
              +  +    + L+ G F+ G ++ A + +    ++ +G    P+ V ++A I  L   
Sbjct: 422 VEGLPINKAAFTLLLDGYFRMGDVAGAYSLW----NEMEGRGIHPDAVAFSAFINGLSIV 477

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A  +F  M      P+N  Y +++RG   + R+ + +ML  +M + G++PD    
Sbjct: 478 GLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTT 537

Query: 547 QVMVRGYQENGDLKSA 562
            +++ G  + G +KSA
Sbjct: 538 NIIINGLCKEGRMKSA 553



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 256/599 (42%), Gaps = 117/599 (19%)

Query: 55  FSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGK-FDSV-WEFYEE 109
           F+ +I+ F   GH+   E  L V +K +  P + A N L+N    +G+ FD++ W  +  
Sbjct: 152 FNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRF-- 209

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G    +VT+G +I+  C QG++M+A NLFD M + G  P VV Y  L++G      
Sbjct: 210 MIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARD 269

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGY------------------------------ 199
           + +A  ++  M+   V P+  T+N L+ G+                              
Sbjct: 270 IGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNI 329

Query: 200 -----CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
                C    ++ A++F  +ML   + P VV F  ++    + G    A   +  M KFG
Sbjct: 330 CVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFG 389

Query: 255 VFP-----------------------------------NIFVYNCLIDGHCKAGNLFEAM 279
           +FP                                   N   +  L+DG+ + G++  A 
Sbjct: 390 LFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAY 449

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           SL +EME   I PD   ++  I GL  VG ++ A  +  +M K+G + N   YNSLI G+
Sbjct: 450 SLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGF 509

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G +++AL +  +M  KG+ P++ T + +I+G CK G + +A  ++  M    L+PD+
Sbjct: 510 CNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDI 569

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  LIDG  K  +   T  +  +M      P + T +  +HG                
Sbjct: 570 VTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHG---------------- 613

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                                  LC   ++ +A  +  ++ S  + PD  TY T++ G+ 
Sbjct: 614 -----------------------LCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC 650

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
               +   M++ A ++KM  VP+ V   +++  + + G  +      + L E   G  E
Sbjct: 651 -TDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGFDE 708



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 186/332 (56%), Gaps = 6/332 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  F+++I A+S  G  E+A   YR   K  + P+   C++L+ GL K  +     + 
Sbjct: 357 PTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDL 416

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             EM++ GL  +   + +L+D     GDV  A +L++EM  +GI P  V ++  I+GL  
Sbjct: 417 LYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSI 476

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + EA  +F  M + G +PN + YN+L+ G+C    +  AL    EM    L P++ T
Sbjct: 477 VGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFT 536

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             ++++GLCK G +++A + F +M   G+ P+I  YN LIDG+CKA +      + ++M 
Sbjct: 537 TNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMY 596

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                PD+ TYNI + GLC   ++  A  +L+++   G++ + VTYN++++G C +  +E
Sbjct: 597 ATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLE 655

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +A+ V +++ +    PNVVT + L+   CK G
Sbjct: 656 RAMIVTAKLLKMAFVPNVVTANLLLSHFCKQG 687



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 204/439 (46%), Gaps = 14/439 (3%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           ++   C    V+ A NL      K +   VV + I   G+    ++VE    F   R   
Sbjct: 25  MVKSSCVAAHVLGAQNL------KFLAQDVVSWVIRRVGVDRSREVVE----FMWKRHAE 74

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
              +    + LM G+ KV     ALE    M    L+P+     +L   L ++G+  +  
Sbjct: 75  FESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVW 134

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  P    +N +I G C+ G++    SL   M+KF+  PDV+ YNILI   
Sbjct: 135 KLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAY 194

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  GQ   A G ++ M   G   ++VT+ ++I+ +C +G+M +A ++   M E G  PNV
Sbjct: 195 CTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNV 254

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           V +++L++G  KA +I  A  LY EM  K++ PD   F  L+ G  + G  ++  RL ++
Sbjct: 255 VCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRD 314

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           + ++         +  + GL   G +  A+ F  +  +K      +P  V + +II A  
Sbjct: 315 LSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKG----ITPTVVAFNSIIAAYS 370

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G   KA K +  M    L P + T ++++ GL +  R+ +   LL +MI  G+  +  
Sbjct: 371 RAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKA 430

Query: 545 INQVMVRGYQENGDLKSAF 563
              +++ GY   GD+  A+
Sbjct: 431 AFTLLLDGYFRMGDVAGAY 449



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 4/304 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           V + L+ G  K     EA+ +   M +  + P      IL K L  +G       LL+ M
Sbjct: 81  VLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGM 140

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G       +N++I G+C++G ++   S+   M +   +P+V  ++ LI+  C  G  
Sbjct: 141 IHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQT 200

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+G    M+     P +V F  +I+     GNM E   L+  M EA   P+V   ++L
Sbjct: 201 FDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTL 260

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++G  K   I  A   + E   K     C+  ++L A   +     G+     +L  D+ 
Sbjct: 261 MNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRY----GREEDRDRLLRDLS 316

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                  +  Y   + GL  A  + + M  L DM++ GI P  V    ++  Y   G  +
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 561 SAFR 564
            A++
Sbjct: 377 KAYK 380



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 16/307 (5%)

Query: 253 FGVFPNIFVYNC--LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
           FG F   F  +   ++   C A ++  A +L     KF ++ DV ++ I      GV + 
Sbjct: 11  FGFFKFAFQDDSDEMVKSSCVAAHVLGAQNL-----KF-LAQDVVSWVIR---RVGVDRS 61

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                 + K + E   ++    ++L+ G+ K     +AL +  +M E G+ P+    + L
Sbjct: 62  REVVEFMWKRHAE-FESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITIL 120

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
                + G+  +   L   M+ +   P    F A+I G  + G++K    L   M + K 
Sbjct: 121 FKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKC 180

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P V+  + LI+     G+  +AL +     D      C+P+ V +  +I A C  G ++
Sbjct: 181 QPDVYAYNILINAYCTRGQTFDALGWMRFMIDNG----CTPSLVTFGTVINAFCNQGNMM 236

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  LF  M+     P+   Y T++ G ++A+ +    ML  +M    + PD     ++V
Sbjct: 237 EARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILV 296

Query: 551 RGYQENG 557
            G+   G
Sbjct: 297 AGHYRYG 303



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 8/217 (3%)

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           E +     +L+ G  K      A+ +   M    L P     T L   L + G+     +
Sbjct: 76  ESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWK 135

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNG--RISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L + M+     P     +++I G  + G  ++  +L   ++K        C P+   Y  
Sbjct: 136 LLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFK------CQPDVYAYNI 189

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I A C  GQ   A      M  +   P   T+ T++        M++   L   M + G
Sbjct: 190 LINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAG 249

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            +P+ V    ++ GY +  D+  A    E +K   + 
Sbjct: 250 HIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVA 286


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 243/488 (49%), Gaps = 14/488 (2%)

Query: 66  GHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           G +EEA+ +   +  L   A   C AL+  L   G+           VL     DV++Y 
Sbjct: 70  GDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARR-----VLASCEPDVMSYN 124

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            ++   C  G +  A  L   M    +EP    Y  LI GLC   +   A ++   M   
Sbjct: 125 AMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR 181

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G VP++ TY  L++  CK +   +A++   EM      P++VT+ V+++G+C+ G +  A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
             F   +  +G  PN   YN ++ G C A    +A  L +EM +    P+V T+N+LI  
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G +E A  +L ++ K G   N ++YN ++  +CK+  M++A++    M   G  P+
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           +V++++L+   C+ G +DAA+ L  ++  K   P ++ +  +IDGL+K G  +E L L  
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM+   + P + T S++  GL + GRI  A+  F +  D        PN VLY AI+  L
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG----IRPNTVLYNAILLGL 477

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C       A  LF+ M S+   P+  TYT ++ GL     + +   ++A++   G+V   
Sbjct: 478 CKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKT 537

Query: 544 VINQVMVR 551
           ++N+  +R
Sbjct: 538 LVNKGAIR 545



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 209/405 (51%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++ ++  +   G ++ A  +   + + P     N L+ GL  +G+ D+     ++M+  G
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
            V DVVTY +L++  C +    +A+ L DEM DKG  P +V Y ++++G+C E ++ +A 
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
              +S+   G  PN  +YN ++ G C       A +   EM      PNVVTF +L+  L
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+ G +  A      + K+G  PN   YN ++   CK   +  AM+    M      PD+
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +YN L+  LC  G+++ A  LL ++  +G    +++YN++IDG  K G  E+AL + ++
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG++P+++T+S++  G C+ G I+ A+  + ++    + P+ V++ A++ GL K   
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
               + L+  M+     P+  T + LI GL   G +  A     E
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 223/478 (46%), Gaps = 15/478 (3%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV-TYGVLIDCCCGQGDVMKALNLFDE 144
           A N  L  L+++G  +      E M   GL          LI   C  G   +A  +   
Sbjct: 58  ASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVL-- 113

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
                 EP V+ Y  ++ G C   ++  A  +  +M    + P+ YTYN L+ G C    
Sbjct: 114 ---ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGR 167

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            + AL    +ML     P+VVT+ +L++  CK    + A      M   G  P+I  YN 
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNV 227

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +++G C+ G + +AM     +  +   P+  +YNI++KGLC   + E AE L+ +M ++G
Sbjct: 228 VVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG 287

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVT+N LI   C+ G +E A+ +  Q+ + G  PN ++++ ++   CK   +D AM
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 347

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
                MV     PD+V +  L+  L + G +   + L  ++ +   TP + + +++I GL
Sbjct: 348 AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G+   AL    E   K       P+ + Y+ I   LC +G+I +A K F  ++   +
Sbjct: 408 TKAGKTEEALELLNEMVTKG----LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGI 463

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           RP+   Y  +L GL + +     + L   M+  G +P+     +++ G    G +K A
Sbjct: 464 RPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 194/434 (44%), Gaps = 50/434 (11%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVV-IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           +GD+ +A+ L + M   G+EP+       LI  LC   +  EA  +  S           
Sbjct: 69  RGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVLAS----------- 115

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
                                         +P+V+++  ++ G C  G+L  A      M
Sbjct: 116 -----------------------------CEPDVMSYNAMVAGYCVTGQLDNARRLVAAM 146

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
               + P+ + YN LI G C  G    A+++  +M +    PDV TY IL++  C     
Sbjct: 147 P---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGY 203

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  LL +M  +G   ++VTYN +++G C+EG ++ A+     +   G EPN V+++ +
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIV 263

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G C A   + A  L  EM  K   P+VV F  LI  L + G ++  + +  ++ +   
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           TP+  + + ++H   K  ++  A+ F     +      C P+ V Y  ++ ALC  G++ 
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFV----ELMVSSGCYPDIVSYNTLLTALCRGGEVD 379

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A +L   ++     P   +Y T++ GL +A +  + + LL +M+  G+ PD +    + 
Sbjct: 380 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439

Query: 551 RGYQENGDLKSAFR 564
            G    G ++ A +
Sbjct: 440 SGLCREGRIEEAIK 453



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 12/307 (3%)

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI   C +G   EA  + +  E     PDV +YN ++ G C  GQL+ A  L+  M  E 
Sbjct: 96  LIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME- 149

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              +  TYN+LI G C  G  + AL+V   M  +G  P+VVT++ L++  CK      A+
Sbjct: 150 --PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EM  K   PD+V +  +++G+ ++G + + +   K +      P+  + + ++ GL
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
               R  +A     E + K       PN V +  +I  LC  G +  A ++   +     
Sbjct: 268 CTAERWEDAEKLMAEMSRKGR----PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P++ +Y  +L    + K+M   M  +  M+  G  PD V    ++      G++ +A  
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVE 383

Query: 565 CSEFLKE 571
               LK+
Sbjct: 384 LLHQLKD 390



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 15/295 (5%)

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G+L EA+ L   M   E S        LIK LC  G+   A  +L     +     V+
Sbjct: 68  RRGDLEEAIRLVESMAGLEPS-AAGPCAALIKKLCASGRTAEARRVLASCEPD-----VM 121

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +YN+++ GYC  G ++ A  + + M    +EP+  T+++LI G C  G  D A+ +  +M
Sbjct: 122 SYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDM 178

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + +  VPDVV +T L++   K    K+ ++L  EM +    P + T + +++G+ + GR+
Sbjct: 179 LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV 238

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A+ F   K+  + G  C PN V Y  +++ LC   +   A KL ++M      P+  T
Sbjct: 239 DDAMEFL--KSLPSYG--CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY--QENGDLKSAF 563
           +  ++  L R   +   M +L  + K G  P+++    ++  +  Q+  D   AF
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVF-TVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           L + G+++E +RL + M  A + PS     ++LI  L  +GR + A              
Sbjct: 66  LVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL---------A 114

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C P+ + Y A++   C  GQ+  A +L + M    + PD  TY T++RGL    R  + 
Sbjct: 115 SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNA 171

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + +L DM++ G VPD V   +++    +    K A +
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 240/482 (49%), Gaps = 7/482 (1%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           +V P I     L++     G  +  +    +++  GL AD V +  L+   C +     A
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 139 LNL-FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYTYNAL 195
           +N+    M + G  P V  Y+ L+ GLC E K  EA  +   M E G    P++ +Y+ +
Sbjct: 68  MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G+ K  DV +A   + +ML H + PNVVT   ++DGLCKV  +  A      M    +
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN   YN LI G+  +G   EA+ +  EM +    P+V TYN+LI  LC  G    A  
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M + G   +  TY SL+ GY  EG++ +  +V   M + G+  N  TFS  I   C
Sbjct: 248 IFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYC 307

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +D A   + +M     +PD+V +T +IDGL K G + + +  + +M++  ++P++ 
Sbjct: 308 KCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNII 367

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LIHG    G+   A   F E  D+       P+  ++ A+I  L  +G++ +A KL
Sbjct: 368 TFTTLIHGFSMYGKWEKAEELFYEMMDRG----IPPDVTIFTAMIDRLFKEGKVTEAQKL 423

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  M     +P+  +Y TM+ G   A  + +VM LL DM+ +G+ P AV    ++ G   
Sbjct: 424 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS 483

Query: 556 NG 557
            G
Sbjct: 484 MG 485



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 230/469 (49%), Gaps = 22/469 (4%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG--LVADVVTYGVLIDCCCGQGDVMKAL 139
           P + + + LL GL  + K +   E    M   G     DVV+Y  +I     +GDV KA 
Sbjct: 82  PDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAY 141

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LF +M+D GI P VV    +I GLC    M +AE++ + M +  ++PN  TYN+L+ GY
Sbjct: 142 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 201

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                   A+    EM     +PNVVT+ +L+D LCK G    A   F  M + G  P+ 
Sbjct: 202 LSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDA 261

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  L+ G+   GNL E  ++   M +  +  +  T++I I   C  G+L+ A     K
Sbjct: 262 TTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIK 321

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G + ++VTY ++IDG CK G ++ A+S   QM + G+ PN++TF++LI G    G 
Sbjct: 322 MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK 381

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + A  L+ EM+ + + PDV +FTA+ID L K+G + E  +L+  M  A   P+V + ++
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +IHG F  G +   +                 + +L      A+ ++        L   M
Sbjct: 442 MIHGYFIAGEVGEVMKLL-------------DDMLLIGLKPTAVTFN-------TLLDGM 481

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
            S  L+PD  T  T++       R+ D++ L  +M+      D +   +
Sbjct: 482 VSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 219/453 (48%), Gaps = 7/453 (1%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  D+ T+G+LI CCC  G +        ++I  G+    V +T L+  LC + +  +A 
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 175 SM-FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVTFGVLM 231
           ++  R M E G  P++++Y+ L+ G C       A E  H M     N  P+VV++  ++
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G  K G++  A   F  M   G+ PN+   N +IDG CK   + +A ++  +M    I 
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  TYN LI G    GQ   A  +L++M ++G   NVVTYN LID  CK G   +A  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            + M + G +P+  T+ SL+ G    GN+     +   MV   +  +   F+  I    K
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E    + +M +    P + T +++I GL K GR+ +A++ F +  D  DG   SP
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMID--DG--LSP 364

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + +  +I      G+  KA +LF +M    + PD   +T M+  L +  ++ +   L 
Sbjct: 365 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             M + G  P+ V    M+ GY   G++    +
Sbjct: 425 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 457



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 196/394 (49%), Gaps = 20/394 (5%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           Y++F  +    IP  N    +++I    ++  +++A  V +++    ++P     N+L++
Sbjct: 141 YTLFCKMLDHGIPP-NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 199

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G +  G++       +EM   G   +VVTY +LIDC C  G   +A  +F+ MI  G +P
Sbjct: 200 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKP 259

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  L+HG   E  +VE  ++   M + G+  N +T++  +  YCK   ++ A   +
Sbjct: 260 DATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTF 319

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M      P++VT+  ++DGLCK+G L  A + F  M   G+ PNI  +  LI G    
Sbjct: 320 IKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMY 379

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G   +A  L  EM    I PDV  +  +I  L   G++  A+ L   M + G   NVV+Y
Sbjct: 380 GKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSY 439

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++I GY   G++ + + +   M   G++P  VTF++L+DG                MV 
Sbjct: 440 NTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVS 483

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
             L PDV     LID   +DG +++ L L++EML
Sbjct: 484 MGLKPDVDTCKTLIDSCCEDGRIEDILTLFREML 517



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 19/254 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           + N   FS  I A+ + G ++EA   + K++ L   P I     +++GL K G+ D    
Sbjct: 293 RSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMS 352

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M+  GL  +++T+  LI      G   KA  LF EM+D+GI P V I+T +I  L 
Sbjct: 353 RFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLF 412

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E K+ EA+ +F  M   G  PN+ +YN ++ GY    +V   ++   +ML   L+P  V
Sbjct: 413 KEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 472

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TF  L+DG                M   G+ P++     LID  C+ G + + ++L  EM
Sbjct: 473 TFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516

Query: 286 EKFEISPDVFTYNI 299
                  D  T NI
Sbjct: 517 LGKADKTDTITENI 530



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 7/221 (3%)

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K V P++ TF  LI   C AG ++       +++   L  D V FT L+  L       +
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 418 TLRL-YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
            + +  + M E   TP VF+ S+L+ GL    +   A        +  DG  C P+ V Y
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAE--DGDNCPPDVVSY 124

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           + +I     +G + KA  LF  M    + P+  T  +++ GL + + M     +L  MI 
Sbjct: 125 STVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMID 184

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE-SRIGS 576
             I+P+      ++ GY  +G    A R    LKE SR G 
Sbjct: 185 EHIMPNCTTYNSLIHGYLSSGQWTEAVR---ILKEMSRDGQ 222


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 250/519 (48%), Gaps = 39/519 (7%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV----------LCGLV--- 116
           E L   R++ V P+      L   L++ G + +VW+ +++++            G++   
Sbjct: 7   EILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGF 66

Query: 117 ----------------------ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
                                  +   Y ++I+ CC +G    AL  F+ MI++G  PTV
Sbjct: 67  CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 126

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V +  +I+  C E  +VEA  +F  ++E G  PN   YN LM+GY K+ ++++A   Y E
Sbjct: 127 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 186

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    + P+ +TF +L+ G  K G           ++  G+ P+  +++  + G C AG 
Sbjct: 187 MRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGR 246

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L EAM    +M +  +SP +  +N +I      G  + A    + M   G+  +  T +S
Sbjct: 247 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 306

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+ G    G +++A  +  QM EKG+  N + F+ L+D   K G++  A  L+ EM  + 
Sbjct: 307 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 366

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PDVV F+A IDGLSK G ++E   ++ EML   + P+ F  +SLI G  K G+++ AL
Sbjct: 367 IFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEAL 426

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
              LEK  +  G    P+      II  LC  G++  A  +F DM    L PD  TY T+
Sbjct: 427 K--LEKVMRHRG--LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           + G  +A  M++   L+  M   G  PD     + + G+
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 521



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 206/409 (50%), Gaps = 5/409 (1%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           NP+V  F+T+I AF + G++ EA  ++   +++   P     N L+NG +K  + D    
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            YEEM   G+  D +T+ +L+      G       L  ++   G+ P   ++ I + GLC
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA      M E G+ P++  +N+++  Y +    ++A E Y  M+H  L P+  
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   L+ GL   G L+ A      M + G+  N   +  L+D   K G++  A SL  EM
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+  I PDV  ++  I GL   G +E A  +  +M ++G++ N   YNSLI G+CK G +
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL +   M  +G+ P++ T + +I G CK G + +A+ ++ +M    L PD++ +  L
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           I+G  K  +M     L   M  +   P + T +  IHG   + R++ A+
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAV 531



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 205/435 (47%), Gaps = 4/435 (0%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL +   M + G+ P+     IL   L           +F+ +   G  P  YT++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+C+   ++      H M   + +PN   + ++++  C  G    A  +F  M + G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P +  +N +I+  CK GN+ EA  L   +++   SP+   YN L+ G   + +++ A  L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M K+GI  + +T+N L+ G+ K G  E    +   ++  G+ P+   F   + G C 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG +D AM    +M+ K L P ++ F ++I   S+ G   +    YK M+   +TPS  T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            SSL+ GL  NGR+  A     +  +K      S N++ +  ++      G ++ A  L+
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKG----LSVNNMAFTVLLDKFFKRGDVVGAQSLW 359

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    + PD   ++  + GL +   + +   +  +M++ G++P+      ++ G+ + 
Sbjct: 360 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKC 419

Query: 557 GDLKSAFRCSEFLKE 571
           G L  A +  + ++ 
Sbjct: 420 GKLNEALKLEKVMRH 434



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 173/341 (50%), Gaps = 3/341 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F+ L+    + G  E+   + + I VL   P     +  ++GL   G+ D   EF  +M
Sbjct: 198 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 257

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL   ++ +  +I      G   KA   +  M+  G+ P+    + L+ GL    ++
Sbjct: 258 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 317

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +   M E G+  N   +  L+D + K  DV  A   + EM    + P+VV F   
Sbjct: 318 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 377

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G +  A N F+ M + G+ PN F YN LI G CK G L EA+ L   M    +
Sbjct: 378 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 437

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+FT N++I GLC  G++  A  +   M++ G+  +++TYN+LI+GYCK  DM  A +
Sbjct: 438 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 497

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           + ++M   G  P++ T++  I G C +  ++ A+ +  E+V
Sbjct: 498 LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 162/283 (57%), Gaps = 5/283 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVW 104
            +PS+  F+++I A+S+ G  ++A   Y+      + P+   C++LL GL   G+     
Sbjct: 262 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 321

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   +M+  GL  + + + VL+D    +GDV+ A +L+ EM  +GI P VV ++  I GL
Sbjct: 322 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 381

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             +  + EA ++F  M   G++PN + YN+L+ G+CK   +N AL+    M H  L P++
Sbjct: 382 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDI 441

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T  +++ GLCK G +R+A N F+ M + G+ P+I  YN LI+G+CKA ++  A +L + 
Sbjct: 442 FTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNR 501

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           M     +PD+ TYNI I G C   ++  A  +L ++   GIL+
Sbjct: 502 MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILS 544



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 4/294 (1%)

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           F+A+ +   M +  + P      IL K L  VG       L + + + G      T++ +
Sbjct: 3   FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I G+C++G +    S+   M +   EPN   ++ +I+  C  G    A+  +  M+ +  
Sbjct: 63  ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P VV F  +I+   K+GN+ E  +L+  + E   +P+    ++L++G  K   I  A N
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA-N 181

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E+  K      +P+ + +  ++      G+     +L  D+    L PD   +   +
Sbjct: 182 MLYEEMRKKG---IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISV 238

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            GL  A R+ + M  L DM++ G+ P  +    ++  Y + G    AF   + +
Sbjct: 239 SGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 292



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 3/224 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ L+  F + G +  A  ++ ++E   + P + A +A ++GL K+G  +  +  +
Sbjct: 335 NNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF 394

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+  GL+ +   Y  LI   C  G + +AL L   M  +G+ P +    ++I GLC +
Sbjct: 395 LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 454

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M  A ++F  M + G+ P++ TYN L++GYCK  D+  A    + M      P++ T+
Sbjct: 455 GRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTY 514

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            + + G C    +  A      +   G+    F     ++ H K
Sbjct: 515 NIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNAHTK 558


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 260/539 (48%), Gaps = 17/539 (3%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA--LWVYRKIEVLP-AIQACNALLNG 93
           + F A  SL +      V   ++ AF E G + EA  + +  +   LP  ++  N +L  
Sbjct: 99  TAFVARGSLPMAH---EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRV 155

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            ++ G F    + ++ M   G+  D  ++  L+  CC +G V +   L   M   G    
Sbjct: 156 GLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLD 215

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
               T+++  LC + +  +    FR M E G  PN+  Y A +DG CK   V +A     
Sbjct: 216 NATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE 275

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKA 272
           EM+   L+PNV T   L+DGLCK+G    A   F+ + K   + PN+  Y  +I G+C+ 
Sbjct: 276 EMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCRE 335

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L  A  L   M +  + P+  TY  LI G C  G  + A  L+ KM +EG L N+ TY
Sbjct: 336 GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 395

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDG+CK+G +++A  V    T +G++ + +T++ LI   CK G+I  A+ L+  MV 
Sbjct: 396 NAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE 455

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               PD+  +T+LI    +   M+E+ + + + L   + P+  T +S+I G  K GR + 
Sbjct: 456 NGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTL 515

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           AL  F    ++     C  + + Y A+I  LC + ++ +A  L+  M    L P   T  
Sbjct: 516 ALRVF----ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRV 571

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           T+     R ++    + +L  + K   V       V+VR     GD+ +A   S FLK+
Sbjct: 572 TLTFEYCRREKTSIAVSVLDRLDKRQQVHTV---DVVVRKLSALGDVDAA---SLFLKK 624



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 203/443 (45%), Gaps = 5/443 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G + +A ++  EM   G+   V     ++         V A  +F  M   GV P+  ++
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            AL+   C+   V         M  +    +  T  V++  LC+ G  +    FF  M +
Sbjct: 185 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 244

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN+  Y   IDG CK   + +A  +  EM    + P+V+T+  LI GLC +G  E 
Sbjct: 245 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 304

Query: 313 AEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L  K+ K      NV TY  +I GYC+EG + +A  +  +M E+G++PN  T+++LI
Sbjct: 305 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 364

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK G+ D A  L  +M  +  +P++  + A+IDG  K G ++E  ++ +      + 
Sbjct: 365 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 424

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T + LI    K G I+ AL+ F    D+     C P+   Y ++I   C   Q+ +
Sbjct: 425 FDKITYTILITEHCKQGHITYALDLF----DRMVENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + K F       L P   TYT+M+ G  +  R    + +   M++ G   D++    ++ 
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           G  +   L+ A    E + + R+
Sbjct: 541 GLCKESRLEEAKALYEGMLDKRL 563



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 207/474 (43%), Gaps = 53/474 (11%)

Query: 55  FSTLIIAFSEMGHIEE------ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           F  L++     G +EE      A+W Y    +  A   C  ++  L +KG+F  V EF+ 
Sbjct: 184 FRALVVVCCREGKVEEVDALLAAMWRY-GFSLDNA--TCTVVVRSLCEKGRFKDVSEFFR 240

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC--- 165
            M+  G   +VV Y   ID  C +  V +A ++ +EM+ +G++P V  +T LI GLC   
Sbjct: 241 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 300

Query: 166 ---------------------------------NENKMVEAESMFRSMRECGVVPNLYTY 192
                                             E K+  AE +   M E G+ PN  TY
Sbjct: 301 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 360

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+ G+CK    +RA E  ++M      PN+ T+  ++DG CK G+++ A         
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+  +   Y  LI  HCK G++  A+ L   M +    PD+  Y  LI   C   Q+E 
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           ++    K    G+L    TY S+I GYCK G    AL V  +M + G   + +T+ +LI 
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK   ++ A  LY  M+ K LVP  V    L     +       + +   + + +   
Sbjct: 541 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ--- 597

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
            V TV  ++  L   G + +A + FL+K    D    + +H  Y   I + CY+
Sbjct: 598 QVHTVDVVVRKLSALGDV-DAASLFLKKVLDED---YAVDHATYTGFINS-CYE 646



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           KF+   ++ LI    + GHI  AL ++ R +E    P I+A  +L++   ++ + +   +
Sbjct: 424 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 483

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+++ ++ GL+    TY  +I   C  G    AL +F+ M+  G     + Y  LI GLC
Sbjct: 484 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 543

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E+++ EA++++  M +  +VP   T   L   YC+    + A+     +   + +  V 
Sbjct: 544 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL---DKRQQVH 600

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  V++  L  +G++ AA  F   +       +   Y   I+  C   N +   +L SEM
Sbjct: 601 TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRY---ALASEM 656

Query: 286 -EKF 288
            EKF
Sbjct: 657 SEKF 660


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 216/428 (50%), Gaps = 5/428 (1%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIA-----FSEMGHIEEALWVYRKIEVLPAIQACNA 89
           C    + L  +      PS+F+  I         EMG     L +  K    P       
Sbjct: 100 CPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTT 159

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ GL   G+     +F++ +   G++ D V YG LI+  C  G  + A  L  EM  + 
Sbjct: 160 VMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQV 219

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++P +VIY ++I   C +    +A  ++  + + G+ P++ TY +L+ G+C+        
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +   EM++ N+ PNV TF VL+D  C+ G++  A   F  M K G  P+I  +N LI GH
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  GN+ EA  L   + +  I PDV++Y ILI G C   +++ A  L  +M  + ++ ++
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y+SLIDG CK G +  A  + S +   G  PNV+T++ LID  CK  +ID  + L+  
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K L P V+ +  LI+G  K   ++E + L   M    + P   T +SL  GL K+GR
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519

Query: 450 ISNALNFF 457
           IS+A   F
Sbjct: 520 ISDAWELF 527



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 255/515 (49%), Gaps = 14/515 (2%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           PK N  + S+          I++A+ ++  +   + LP++   N ++  ++K        
Sbjct: 52  PKQNAKILSSF-------NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAI 104

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++MV  G+   + T  + I+C C  G++  A ++   ++ +G +P  +  T ++ GL
Sbjct: 105 SLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGL 164

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   ++ +A     ++   G++ +   Y  L++G CK+     A +   EM    ++PN+
Sbjct: 165 CINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNI 224

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V + +++D  CK      A + ++ +   G+ P+I  Y  LI G C+ G   E   L  E
Sbjct: 225 VIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE 284

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    I+P+V+T+N+LI   C  G++  A+G+   M K G   ++VT+N+LI G+C  G+
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           + +A  +   + E+G+ P+V +++ LI G CK   ID A+ L+ EM  K++V D+V++++
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LIDGL K G +     L+  +      P+V T + LI    K   I   +  F     K 
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                +P  + Y  +I   C   +I +A  L S M+S NL PD+ TY ++  GL ++ R+
Sbjct: 465 ----LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRI 520

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            D   L   M   G   D     V++  + +  D+
Sbjct: 521 SDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 227/451 (50%), Gaps = 7/451 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L  +M+ KG+ P++   +I I+  C+  +M  A S+   + + G  PN  T   +M 
Sbjct: 103 AISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMK 162

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C   +V +A++F+  +    +  + V +G L++GLCK+G    A      M    V P
Sbjct: 163 GLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKP 222

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           NI +YN +ID  CK     +A  L  ++    I PD+ TY  LI+G C  GQ    + L+
Sbjct: 223 NIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  + I  NV T+N LID +C++G M +A  + + M ++G +P++VTF++LI G C  
Sbjct: 283 CEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLH 342

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           GN+  A  L+  +  + ++PDV  +T LI G  K   + E + L+ EM    +   +   
Sbjct: 343 GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLY 402

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           SSLI GL K+GRIS A   F   T   DG    PN + Y  +I A C    I    +LF 
Sbjct: 403 SSLIDGLCKSGRISYAWELF--STINNDGP--PPNVITYNILIDAFCKIQDIDMGIELFK 458

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M    L P   TY  ++ G  ++KR+ + M LL+ M    + PD++    +  G  ++G
Sbjct: 459 LMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG 518

Query: 558 DLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
            +  A+   E  K   +G    +  T    L
Sbjct: 519 RISDAW---ELFKVMHVGGPPVDVATYNVLL 546



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 177/359 (49%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++ A+  ++ +++    P+V+ F  ++  + K+     A +    M   GV P+IF  + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            I+ +C  G +  A S+   + K    P+  T   ++KGLC  G+++ A      +  +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +L + V Y +LI+G CK G    A  +  +M  + V+PN+V ++ +ID  CK      A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            LY ++V   + PD++ +T+LI G  + G   E  +L  EM+   I P+V+T + LI   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            + G++  A   F     +       P+ V +  +I   C  G +L+A KLF  +    +
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQ----QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            PD  +YT ++ G  + KR+ + + L  +M    +V D V+   ++ G  ++G +  A+
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           K L     ++ A  L   +     L +V+ +N++I    K      A+S+  QM  KGV 
Sbjct: 57  KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVT 116

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++ T S  I+  C  G +  A  +   ++ +   P+ +  T ++ GL  +G +++ +  
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF 176

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  +    +        +LI+GL K GR  +A     E     +G    PN V+Y  II 
Sbjct: 177 HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQE----MEGQVVKPNIVIYNMIID 232

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           + C D    KA  L+  +    + PD  TYT+++RG  R  +  +V  L+ +M+   I P
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292

Query: 542 DAVINQVMVRGYQENGDLKSA 562
           +     V++  +   G +  A
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEA 313


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 286/549 (52%), Gaps = 18/549 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALN-SLEIPKFNPSVFSTLI 59
           + +VL N++ Y +A  L+ ++    +    P      V  ALN S  I + N +VF  L+
Sbjct: 122 VIHVLVNSRRYDDALSLMGNLMT--VNGLSP----LEVLEALNNSYGICESNHAVFDALV 175

Query: 60  IAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A +++G    A  V +K+++      I A N  L+ LIK  +    W  Y+EMV  G +
Sbjct: 176 RACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYM 235

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V T+ V++   C    + +AL++F  ++  GI P VV + +++ G C    M  A  +
Sbjct: 236 ENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKL 295

Query: 177 FRSMR---ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            R M       + PN  TYN+L+DG+CK+  +  A E  +EM+  +++PNV T+  +++G
Sbjct: 296 VRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEG 355

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
             + G L  A      M + G+ PN  VYN ++      G++  A  + ++M   +I  D
Sbjct: 356 YSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLD 415

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
            FT +IL +GLC  G +  A   L ++ +  ++ +  ++N LI+  CK  +   A  + +
Sbjct: 416 KFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLA 475

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  +G+ P+VVTF +LIDG CK GNI++A+ +Y +MV     P+++V+ ++I+GL KDG
Sbjct: 476 RMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDG 535

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + +  R   ++L+        T ++LI+G F  G+   A  F L    +  G   S   
Sbjct: 536 -LVDVARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKA--FKLSTLMQNAGILASS-- 590

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I+ LC  G + +A +L + M    + PDN TY T++  + +     +V+ L   
Sbjct: 591 ATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDY 650

Query: 534 MIKMGIVPD 542
           M+  G+VPD
Sbjct: 651 MVLKGVVPD 659



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 254/521 (48%), Gaps = 30/521 (5%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           WV  K  VL +++   ++++ L+   ++D             L+ +++T   L       
Sbjct: 105 WVGEKKSVLHSLEISCSVIHVLVNSRRYDDA---------LSLMGNLMTVNGL-----SP 150

Query: 133 GDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            +V++ALN        GI E    ++  L+         V A  + + ++  G    ++ 
Sbjct: 151 LEVLEALN-----NSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHA 205

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N  +    KV +++R    Y EM+ +    NV TF V++  LCK  +L+ A + F  + 
Sbjct: 206 WNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRIL 265

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE---ISPDVFTYNILIKGLCGVG 308
           K G++PN+  +N ++DG CK G++  A+ L  +ME      I P+  TYN LI G C +G
Sbjct: 266 KSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIG 325

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            +  AE L  +M K  I  NV TY ++I+GY + G +E+AL +C +M E+G+ PN V ++
Sbjct: 326 GITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYN 385

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           S++      G++D A  ++T+M  K +  D    + L  GL ++G +   L+   ++LE 
Sbjct: 386 SIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLEN 445

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            +    F+ + LI+ L K+   + A         +       P+ V +  +I   C +G 
Sbjct: 446 NLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRG----LVPDVVTFGTLIDGHCKEGN 501

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI-KMGIVPDAVINQ 547
           I  A +++  M     +P+   Y +++ GL +   ++DV   L D++ +MG+V D +   
Sbjct: 502 IESAVQVYDKMVKGEEKPNLLVYNSIINGLCK-DGLVDVARSLVDVLQRMGLV-DTITYN 559

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
            ++ GY   G    AF+ S  ++ + I +S    +T   FL
Sbjct: 560 TLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFL 600



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 210/402 (52%), Gaps = 7/402 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N   F+ ++    +MG ++ AL + RK+E++      P     N+L++G  K G      
Sbjct: 272 NVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAE 331

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   EM+   +  +V TY  +I+     G + +AL L DEM+++G+ P  V+Y  ++H L
Sbjct: 332 ELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWL 391

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             E  +  A  +F  M +  +  + +T + L  G C+   +  AL+F +++L +NL  + 
Sbjct: 392 YMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDA 451

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            +  +L++ LCK     AA      M   G+ P++  +  LIDGHCK GN+  A+ +  +
Sbjct: 452 FSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDK 511

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M K E  P++  YN +I GLC  G ++ A  L+  + + G L + +TYN+LI+GY   G 
Sbjct: 512 MVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMG-LVDTITYNTLINGYFNCGK 570

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            +KA  + + M   G+  +  T++++I   CK G +  A  L T MV+  ++PD + +  
Sbjct: 571 FDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRT 630

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           L+  ++K+ + +E + L+  M+   + P   T  +++  L +
Sbjct: 631 LVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQ 672



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 4/367 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +++LI  F ++G I   EE      KI++ P ++    ++ G  + G  +    
Sbjct: 308 KPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALR 367

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EMV  GL+ + V Y  ++     +GDV  A  +F +M DK I       +IL  GLC
Sbjct: 368 LCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLC 427

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +  A      + E  ++ + +++N L++  CK  +   A +    M    L P+VV
Sbjct: 428 RNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVV 487

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TFG L+DG CK G + +A   +  M K    PN+ VYN +I+G CK G +  A SL   +
Sbjct: 488 TFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVL 547

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  +  D  TYN LI G    G+ + A  L   M   GILA+  TYN++I   CK G +
Sbjct: 548 QRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCV 606

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  + + M   GV P+ +T+ +L+    K  + +  + L+  MV+K +VPD + +  +
Sbjct: 607 QEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENI 666

Query: 406 IDGLSKD 412
           +  L ++
Sbjct: 667 VSPLLQE 673


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 253/524 (48%), Gaps = 11/524 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  E+A   L   R+   +P++ + N++L  L KK K D     +E M
Sbjct: 321 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 380

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +  TY ++ID  C  G V +A  + DEM    + P ++   I++  LC   K+
Sbjct: 381 KK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 439

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F S  + G  P+  TY +L+DG  K   V+ A   + +ML      N V +  L
Sbjct: 440 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 499

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +      G        F  + + G  P++ + N  +D   KAG + +   +  ++  +  
Sbjct: 500 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV +Y+ILI GL   GQ      +   M ++G   +   YN+++DG+CK G + KA  
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 619

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EK V+P V T+ +++DG  K   +D A  L+ E   K +  +VV++++LIDG  
Sbjct: 620 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 679

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +EM++  +TP+V+T +SL+  L K   I+ AL  F    +      C 
Sbjct: 680 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK----CP 735

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y+ +I  LC   +  KA   + DM+   L P+  TYTTM+ GL +   + D   L
Sbjct: 736 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                  G +PDA     ++ G         A++  E   E+R+
Sbjct: 796 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFE---ETRL 836



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 235/453 (51%), Gaps = 7/453 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N S ++ +I      G +EEA  +  ++E   + P +   N +++ L K  K +  ++ +
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 446

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E     G   D VTY  LID    +G V +A  LF++M+D G     V+YT LI      
Sbjct: 447 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 506

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  +   +F+ +   G  P+L   N  MD   K  +V +    + ++  +   P+V ++
Sbjct: 507 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 566

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+ GL K G+ R   N F  M + G   +   YN ++DG CK+G + +A  +  EM++
Sbjct: 567 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 626

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P V TY  ++ GL  + +L+ A  L ++   +GI  NVV Y+SLIDG+ K G +++
Sbjct: 627 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 686

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M +KG+ PNV T++SL+D   KA  I+ A+  +  M      P+   ++ LI+
Sbjct: 687 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILIN 746

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL +     +    +++M +  + P+V T +++I GL K G I++A + F  +  K +GG
Sbjct: 747 GLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF--ERFKANGG 804

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
              P+   + A+I+ +    + ++A ++F + R
Sbjct: 805 I--PDAASFNALIEGMSNANRAMEAYQVFEETR 835



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 250/521 (47%), Gaps = 8/521 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+TL+ A +  G + +AL +  +++   + P I   N  ++   K G  D  W+F+ E+
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D V+Y  +I   C  G + +A  LF +M  +   P    Y  +I G  +  + 
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   +RE G +P++ ++N+++    K   V+ AL  + E++  + +PN  T+ ++
Sbjct: 336 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 394

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LC  G +  A      M    +FPN+   N ++D  CKA  L EA  +     +   
Sbjct: 395 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD  TY  LI GL   GQ++ A  L +KM   G  AN V Y SLI  +   G  E    
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 514

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++  +G +P++   ++ +D   KAG ++    ++ ++     +PDV  ++ LI GL+
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G  +ET  ++  M +          ++++ G  K+G++  A     E  +K       
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC----VQ 630

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P    Y AI+  L    ++ +A  LF + +S  +  +   Y++++ G  +  R+ +  ++
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           L +M+K G+ P+      ++    +  ++  A  C + +KE
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 241/519 (46%), Gaps = 8/519 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++++I    + G + EA  ++ ++E    +P   A N ++ G    G+F+  ++  E + 
Sbjct: 287 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 346

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G +  VV++  ++ C   +  V +AL+LF E++ K  EP    Y I+I  LC   ++ 
Sbjct: 347 ERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVE 405

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M    + PNL T N ++D  CK   +  A + +         P+ VT+  L+
Sbjct: 406 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 465

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGL K G++  A   F  M   G   N  VY  LI      G   +   +  E+ +    
Sbjct: 466 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCK 525

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+   N  +  +   G++E    + + +   G L +V +Y+ LI G  K G   +  ++
Sbjct: 526 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 585

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M ++G   +   +++++DG CK+G +  A  +  EM  K + P V  + A++DGL+K
Sbjct: 586 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 645

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + E   L++E     I  +V   SSLI G  K GRI  A     E   K      +P
Sbjct: 646 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG----LTP 701

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   + +++ AL    +I +A   F  M+     P+  TY+ ++ GL R ++     +  
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            DM K G+VP+ V    M+ G  + G++  A+   E  K
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 800



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 5/487 (1%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           QAC  L   L++  + D        M           Y VLI          +AL L  +
Sbjct: 145 QACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQ 204

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M + G E  V ++T L+  L  E ++ +A ++   ++   + P++  YN  +D + K  +
Sbjct: 205 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 264

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V+ A +F+HE+    L+P+ V++  ++  LCK G L  A   F  M      P  + YN 
Sbjct: 265 VDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 324

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I G+  AG   +A  L   + +    P V ++N ++  L    +++ A  L + M K+ 
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 384

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              N  TYN +ID  C  G +E+A  +  +M    + PN++T + ++D  CKA  ++ A 
Sbjct: 385 -EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 443

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++     +   PD V + +LIDGL K G + E  RL+++ML+A    +    +SLI   
Sbjct: 444 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 503

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           F +GR  +    F E   +     C P+  L    +  +   G++ K   +F D+RS   
Sbjct: 504 FIHGRKEDGHKIFKELIRRG----CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            PD  +Y+ ++ GL +A +  +   +   M + G   DA     +V G+ ++G +  A+ 
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 619

Query: 565 CSEFLKE 571
             E +KE
Sbjct: 620 ILEEMKE 626



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 204/411 (49%), Gaps = 13/411 (3%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKI 78
           + + L K+RK     Y +F + +       NP    + +LI    + G ++EA  ++ K+
Sbjct: 429 MVDRLCKARKLEEA-YKIFESASQRGC---NPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484

Query: 79  EVLPAIQACN-----ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG 133
             L A    N     +L+      G+ +   + ++E++  G   D+      +DC    G
Sbjct: 485 --LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           +V K   +F+++   G  P V  Y+ILIHGL    +  E  ++F +M++ G   +   YN
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 602

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           A++DG+CK   V++A E   EM    +QP V T+G ++DGL K+  L  A   F      
Sbjct: 603 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 662

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+  N+ +Y+ LIDG  K G + EA  +  EM K  ++P+V+T+N L+  L    ++  A
Sbjct: 663 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 722

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
               Q M +     N  TY+ LI+G C+     KA      M ++G+ PNVVT++++I G
Sbjct: 723 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 782

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             K GNI  A  L+        +PD   F ALI+G+S      E  ++++E
Sbjct: 783 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEE 833



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 232/528 (43%), Gaps = 40/528 (7%)

Query: 71  ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
           A+ V R+++  PA  A   L+  L +  + +   E   +M   G    V  +  L+    
Sbjct: 166 AVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA 225

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVI---------------------------------- 156
            +G V  AL L DE+    +EP +V+                                  
Sbjct: 226 REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285

Query: 157 -YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            YT +I  LC   ++ EAE +F  M     VP  Y YN ++ GY        A +    +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                 P+VV+F  ++  L K  ++  A + F  M K    PN   YN +ID  C  G +
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 404

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  +  EME   + P++ T NI++  LC   +LE A  + +   + G   + VTY SL
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDG  K+G +++A  +  +M + G   N V ++SLI      G  +    ++ E++ +  
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD+ +    +D + K G +++   +++++      P V + S LIHGL K G+     N
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F     +   G+       Y A++   C  G++ KA ++  +M+   ++P   TY  ++
Sbjct: 585 IFHAMKQQ---GFALDARA-YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            GL +  R+ +  ML  +    GI  + V+   ++ G+ + G +  A+
Sbjct: 641 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSV 103
           F P V  +S LI   ++ G   E   ++  ++     L A +A NA+++G  K GK    
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA-RAYNAVVDGFCKSGKVHKA 617

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +E  EEM    +   V TYG ++D       + +A  LF+E   KGIE  VV+Y+ LI G
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                ++ EA  +   M + G+ PN+YT+N+L+D   K  ++N AL  +  M      PN
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+ +L++GLC+V +   A  F+  M K G+ PN+  Y  +I G  K GN+ +A SL  
Sbjct: 738 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL-- 795

Query: 284 EMEKFEIS---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             E+F+ +   PD  ++N LI+G+    +   A  + ++    G   N+ +  SL+D   
Sbjct: 796 -FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALN 854

Query: 341 KEGDMEKALSVCSQMTE 357
           K   +E+A  V + + E
Sbjct: 855 KSECLEQAAIVGAVLRE 871


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 247/506 (48%), Gaps = 36/506 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+ AF+ +G I++A  V   +      P ++  N L  GL + GK D  +   +EM
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 111 -VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
             L   + DVVTY  L+D C        AL L +EM DKG++PT+V + I++  LC E K
Sbjct: 340 ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA      + E G+ P++ TYN L+D YCK  +V +A     EM+   L+ +  T   
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++  LCK+     A        + G  P+   Y  ++  + K  N   A+ L  +M + +
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P + TYN LIKGLC + +L+ A   L ++ ++G++ +  TYN +I  YCKEGD+E A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
              ++M E   +P+VVT ++L++G C  G +D A+ L+   V K    DV+ +  LI  +
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGG 467
            K G++   L  + +M    + P  FT + ++  L + GR   A N    L  + K    
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 468 YCSP----------------------------NHVL--YAAIIQALCYDGQILKASKLFS 497
           +  P                            ++ L  Y   +  LC  GQ+ +A  +  
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKR 523
           +M    +  D+ TY T++ GL++ ++
Sbjct: 760 EMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 258/542 (47%), Gaps = 16/542 (2%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLP 82
           SR P  +  +  +   SL   + +P+   F+ L+      G + +AL     ++   + P
Sbjct: 182 SRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSP 241

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
                N LLN   +KG           M   G+     TY  L+      G + +A  + 
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCK 201
           + M   G EP +  Y +L  GLC   K+ EA  +   M R    +P++ TYN L+D   K
Sbjct: 302 ESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK 361

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + AL    EM    ++P +VT  +++  LCK G+L  A      +A+ G+ P++  
Sbjct: 362 WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LID +CKAGN+ +A +L  EM    +  D FT N ++  LC + + E AE LL    
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G + + V+Y +++  Y KE + E AL +  QM E+ + P++ T+++LI G C+   + 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+    E+V K LVPD   +  +I    K+G+++   R + +M+E    P V T ++L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 442 HGLFKNGRISNALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +GL  +G++  AL  F   +EK  K D        + Y  +IQ++C  G +  A   F D
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDV-------ITYNTLIQSMCKVGDVDTALHFFDD 654

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+PD  TY  +L  L  A R  +   +L  +   G +  +    ++     +  D
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEAD 714

Query: 559 LK 560
           +K
Sbjct: 715 VK 716



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 224/466 (48%), Gaps = 48/466 (10%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +L++F  +I+  + P    + +L+H  C++  + +A +   +M+  G+ P+  TYN L++
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+   +  A      M    + P   T+  L+    ++G ++ A      M  +G  P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILI----KGLCGVGQLEG 312
           ++  YN L  G C+AG + EA  L  EME+   + PDV TYN L+    K  C    L  
Sbjct: 312 DLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR- 370

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              LL++M  +G+   +VT+N ++   CKEG +E+AL    ++ E+G+ P+V+T+++LID
Sbjct: 371 ---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 373 GQCKAGNIDAAMGLYTEMVIKSL-----------------------------------VP 397
             CKAGN+  A  L  EMV K L                                   VP
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D V +  ++    K+ N +  LRL+ +M+E K+ PS+ T ++LI GL +  R+  A++  
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  +K       P+   Y  II A C +G +  A +  + M  ++ +PD  T  T++ G
Sbjct: 548 NELVEKG----LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L    ++   + L    ++ G   D +    +++   + GD+ +A 
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESM--FRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +G+ P++     ++  L      +   S+  FRS+ E  + PN YT+N L+  +C    +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL     M    L P+ VT+  L++  C+ G L  A      M + G+ P    YN L
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EG 324
           +    + G + +A  +   M  +   PD+ TYN+L  GLC  G+++ A  L  +M +   
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST 344

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            L +VVTYN+L+D   K      AL +  +M +KGV+P +VT + ++   CK G ++ A+
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           G   ++  + L PDV+ +  LID   K GN+ +   L  EM+   +    FT++++++ L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  R  +A         +   G+  P+ V Y  ++ A   +     A +L+  M    L
Sbjct: 465 CKMKRYEDAEELLHSPPQR---GFV-PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P   TY T+++GL R +R+ + +  L ++++ G+VPD     +++  Y + GDL++AFR
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 193/395 (48%), Gaps = 8/395 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGEL--RAA 243
           P     +A +  Y ++   + A +  H +     ++P++     ++  L +      +A+
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            + F  + +  + PN + +N L+  HC  G L +A++  S M+ F +SPD  TYN L+  
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G L  A  LL +M ++GI     TYN+L+  + + G +++A  V   MT  G EP+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + T++ L  G C+AG +D A  L  EM  + + +PDVV +  L+D   K     + LRL 
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM +  + P++ T + ++  L K G++  AL     K +K      +P+ + Y  +I A
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG----KLEKIAEEGLAPDVITYNTLIDA 428

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G + KA  L  +M    L+ D  T  T+L  L + KR  D   LL    + G VPD
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            V    ++  Y +  + + A R  + + E ++  S
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 273/550 (49%), Gaps = 16/550 (2%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIE 79
           +NL K+R+   V       +++L +P+F  +  S L  +F    H   A   L +  K  
Sbjct: 50  DNLRKARQYDAVVSVYHKMVSALVLPRF--TSLSALTESFVNTHHPSFAFSVLSLMTKRG 107

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVM 136
               +   N +L G  + G+ D     + +M     C +V D VTY  L++  C    + 
Sbjct: 108 FGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC-VVPDCVTYNTLVNGFCKAKRLA 166

Query: 137 KALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +A  LF+ M   G   P +V Y++LI   C   ++ E   +   M   G+  +++ Y++L
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +  +C   D+    E + EML   + PNVVT+  LM GL + G  R A      M   GV
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P++  Y  L DG CK G   +A+ +   M +    P   TYN+++ GLC   +++ A G
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEK-GVEPNVVTFSSLIDG 373
           +++ M K+G   + VTYN+L+ G C  G + +A+ +   + +EK  V+P+V T ++LI G
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +  A  +++ MV   L  ++V +  LI+G      + E L+L+K  +E+  +P+
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T S +I+GL K   +S A   F +  D        P  + Y A++ +LC +  + +A 
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSG----IRPTVIDYNALMTSLCREDSLEQAR 522

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            LF +MR+ N   D  ++  ++ G L+A  +     LL++M  M +VPDAV   +++  +
Sbjct: 523 SLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582

Query: 554 QENGDLKSAF 563
            + G L  A 
Sbjct: 583 SKLGMLDEAM 592



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 232/448 (51%), Gaps = 9/448 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+S+LI AF   G IE    ++ ++   +V P +   + L+ GL + G++    E  ++M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DVV Y VL D  C  G    A+ + D M+ KG EP  + Y ++++GLC E++M
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRM 341

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVTFG 228
            +A  +   M + G  P+  TYN L+ G C    ++ A++ +  +L    +++P+V T  
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+ GLCK G +  A      M + G+  NI  YN LI+G+  A  L EA+ L     + 
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
             SP+  TY+++I GLC +  L  A GL  KM   GI   V+ YN+L+   C+E  +E+A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            S+  +M       +VV+F+ +IDG  KAG++ +A  L +EM +  LVPD V F+ LI+ 
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            SK G + E + LY++M+     P V    SL+ G    G     ++   +  DK     
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKD---- 637

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLF 496
              +  L + I+  LC+  + L   K+ 
Sbjct: 638 VVLDSKLTSTILACLCHMSRNLDVEKIL 665



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/541 (28%), Positives = 261/541 (48%), Gaps = 23/541 (4%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIE-----VLPAI 84
           HH  ++ F+ L+ +    F  +V++  ++   F   G  ++A+ ++ +++     V+P  
Sbjct: 91  HHPSFA-FSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDC 149

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFD 143
              N L+NG  K  +       +E M   G    ++VTY VLIDC C  G+V + L L +
Sbjct: 150 VTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLE 209

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM  +G++  V +Y+ LI   C E  +     +F  M    V PN+ TY+ LM G  +  
Sbjct: 210 EMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTG 269

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
               A E   +M    ++P+VV + VL DGLCK G    A      M + G  P    YN
Sbjct: 270 RWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYN 329

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +++G CK   + +A  +   M K    PD  TYN L+KGLCG G++  A  L + +  E
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389

Query: 324 G--ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
              +  +V T N+LI G CKEG +  A  + S M E G++ N+VT++ LI+G   A  + 
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+   V     P+ + ++ +I+GL K   +     L+ +M ++ I P+V   ++L+
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNH----VLYAAIIQALCYDGQILKASKLFS 497
             L +   +  A + F E  +         NH    V +  II      G +  A +L S
Sbjct: 510 TSLCREDSLEQARSLFQEMRN--------VNHNVDVVSFNIIIDGTLKAGDVKSAKELLS 561

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M   +L PD  T++ ++    +   + + M L   M+  G VP  V+   +++GY   G
Sbjct: 562 EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKG 621

Query: 558 D 558
           +
Sbjct: 622 E 622



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 250/528 (47%), Gaps = 43/528 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  AC+ L++ L K  ++D+V   Y +MV   ++    +   L +          A ++
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR---ECGVVPNLYTYNALMDG 198
              M  +G    V    +++ G C   +  +A S+F  M+   +C VVP+  TYN L++G
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC-VVPDCVTYNTLVNG 158

Query: 199 YCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           +CK   +  A   +  M    + +PN+VT+ VL+D  CK GE+         M + G+  
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++FVY+ LI   C  G++     L  EM + ++SP+V TY+ L++GL   G+   A  +L
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M   G+  +VV Y  L DG CK G    A+ V   M +KG EP  +T++ +++G CK 
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK--ITPSVF 435
             +D A G+   MV K   PD V +  L+ GL   G + E + L+K +L  K  + P VF
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVF 398

Query: 436 TVSSLIHGLFKNGRISNA------------------LNFFLE------------KTDK-- 463
           T ++LI GL K GR+ +A                   NF +E            K  K  
Sbjct: 399 TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYA 458

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            + G+ SPN + Y+ +I  LC    +  A  LF  M+   +RP    Y  ++  L R   
Sbjct: 459 VESGF-SPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDS 517

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +     L  +M  +    D V   +++ G  + GD+KSA    E L E
Sbjct: 518 LEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSA---KELLSE 562



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 219/445 (49%), Gaps = 17/445 (3%)

Query: 138 ALNLFDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           A++LF   ID      P+    + LI  L    +     S++  M    V+P   + +AL
Sbjct: 24  AVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSAL 83

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF-- 253
            + +      + A      M       NV    +++ G C+ G+   A + F  M +   
Sbjct: 84  TESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYD 143

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF-EISPDVFTYNILIKGLCGVGQLEG 312
            V P+   YN L++G CKA  L EA  L   M+K  +  P++ TY++LI   C  G++  
Sbjct: 144 CVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGE 203

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
             GLL++M +EG+ A+V  Y+SLI  +C EGD+E    +  +M  + V PNVVT+S L+ 
Sbjct: 204 GLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQ 263

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  + G    A  +  +M  + + PDVV +T L DGL K+G   + +++   M++    P
Sbjct: 264 GLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323

Query: 433 SVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
              T + +++GL K  R+ +A   +   ++K  K       P+ V Y  +++ LC  G+I
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKK-------PDAVTYNTLLKGLCGAGKI 376

Query: 490 LKASKLFSDMRSD--NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +A  L+  + S+  +++PD  T   +++GL +  R+ D   + + M++MG+  + V   
Sbjct: 377 HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN 436

Query: 548 VMVRGYQENGDLKSAFRCSEFLKES 572
            ++ GY     L  A +  ++  ES
Sbjct: 437 FLIEGYLAARKLIEALKLWKYAVES 461



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 140/315 (44%), Gaps = 40/315 (12%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA--LW---VYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
           K +   ++TL+      G I EA  LW   +  K  V P +  CN L+ GL K+G+    
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL---------------------- 141
              +  MV  GL  ++VTY  LI+       +++AL L                      
Sbjct: 417 ARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMING 476

Query: 142 -------------FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
                        F +M D GI PTV+ Y  L+  LC E+ + +A S+F+ MR      +
Sbjct: 477 LCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVD 536

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           + ++N ++DG  K  DV  A E   EM   +L P+ VTF +L++   K+G L  A   + 
Sbjct: 537 VVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYE 596

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G  P + V++ L+ G+   G   + +SL  +M   ++  D    + ++  LC + 
Sbjct: 597 KMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMS 656

Query: 309 QLEGAEGLLQKMYKE 323
           +    E +L K  ++
Sbjct: 657 RNLDVEKILPKFSQQ 671


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 244/486 (50%), Gaps = 40/486 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           ++++  L+K+ K +  ++  EEM+  G   DV  +  ++       ++ KA  ++  M++
Sbjct: 14  SSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE 73

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  V Y ILIHGL    K+ E+  +   M   G  P++  Y++L+    K   V+ 
Sbjct: 74  SGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDH 133

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + EM+     P+ + F  L+ GLC+ G+++ A   F  M K G  PN+ VYN L+ 
Sbjct: 134 ASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLH 193

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C +G L +A +L +EM+    SPDV TYN L+  +C   ++E    L + M   G + 
Sbjct: 194 GLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP 253

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV+T+++LI G C+ G++EKAL V   M E G +PN  T+++LI G C+A  +  A  L+
Sbjct: 254 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELF 313

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKITPSVFTVSSLIHGLFK 446
            +M    + PD V + +LI G  K G+M E  +LY+EM   A + P++ T ++LI G   
Sbjct: 314 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG--- 370

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
                                                C  G++ +A++L ++M +  L  
Sbjct: 371 ------------------------------------FCKLGKLGRANELVAEMGTKGLAA 394

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D+CTY  ++ GL RA ++ + + +   M +   + D V     V G  + G++  A+   
Sbjct: 395 DSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 454

Query: 567 EFLKES 572
           E  ++S
Sbjct: 455 EATRKS 460



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 230/490 (46%), Gaps = 43/490 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S++I +  +    EE+  V  ++      P + A N ++ G  +    +   E Y+ M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   D V+Y +LI      G + ++L +  EM+ +G  P++  Y+ L+  L    ++
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A S+F  M   G  P+   +  L+ G C+   V  A E + +M  H  QPNV  + VL
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN------LFEAM----- 279
           + GLC  G+L  A   F  M      P++  YN L+D  CKA        LFEAM     
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 280 ------------SLC--SEMEK-FEI---------SPDVFTYNILIKGLCGVGQLEGAEG 315
                        LC   E+EK  E+          P+ +TY  LI GLC   ++  A  
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVEPNVVTFSSLIDGQ 374
           L +KM +  I  + V YNSLI GYCK G M++A  +  +M+   G++P +VTF++LIDG 
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +  A  L  EM  K L  D   +  LI GLS+   + E L +YK+M E K     
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            +  S + GL K G I  A   F E T K+      PN   +  + ++L   G++  A K
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVF-EATRKSGA---VPNPETFRILSESLIKLGRVEDAQK 487

Query: 495 LFSDMRSDNL 504
           L    ++ ++
Sbjct: 488 LMEPAKARDI 497



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 216/430 (50%), Gaps = 5/430 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M DK I   V  Y+ +I  L  E K  E+  +   M   G  P+++ +N +M G+ +  +
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           + +A E Y  M+    +P+ V++ +L+ GL K+G+L  +      M   G  P++  Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+    KA  +  A SL  EM +    PD   +  LI GLC  G+++ A    ++M K G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NV  YN L+ G C  G +E+A ++ ++M      P+VVT+++L+D  CKA  ++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+  M     VP+V+ F+ LI GL + G +++ L ++  MLEA   P+ +T ++LI GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-N 503
            +  ++  A   F    +K       P+ V Y ++I   C  G + +A KL+ +M     
Sbjct: 301 CRAEKVIQARELF----EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 356

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+P   T+ T++ G  +  ++     L+A+M   G+  D+   ++++ G      L  A 
Sbjct: 357 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEAL 416

Query: 564 RCSEFLKESR 573
              + ++E +
Sbjct: 417 EVYKQMREKK 426



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 198/416 (47%), Gaps = 39/416 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI   +++G ++E+L +  ++ +    P++QA ++L+  L K  + D     ++EM+
Sbjct: 83  YHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMI 142

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   D + +  LI   C  G V  A   F +M   G +P V +Y +L+HGLC+  ++ 
Sbjct: 143 RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLE 202

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A ++F  M+     P++ TYN L+D  CK   V    + +  M      PNV+TF  L+
Sbjct: 203 QANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI 262

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+ GEL  A   F  M + G  PN + Y  LI G C+A  + +A  L  +M +  I 
Sbjct: 263 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIP 322

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALS 350
           PD   YN LI G C  G ++ AE L ++M    G+   +VT+N+LIDG+CK G + +A  
Sbjct: 323 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANE 382

Query: 351 VCSQMTEKGVEPNVVTFS-----------------------------------SLIDGQC 375
           + ++M  KG+  +  T+                                    S + G C
Sbjct: 383 LVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC 442

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           K GNID A  ++        VP+   F  L + L K G +++  +L +      IT
Sbjct: 443 KTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 155/350 (44%), Gaps = 54/350 (15%)

Query: 18  IKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
           +KD +E     + P H C             + N  V++ L+      G +E+A  ++ +
Sbjct: 166 VKDASERF--KQMPKHGC-------------QPNVPVYNVLLHGLCSSGQLEQANTLFAE 210

Query: 78  IE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           ++     P +   N LL+ + K  + +   + +E M   G V +V+T+  LI   C  G+
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           + KAL +F  M++ G +P    YT LI GLC   K+++A  +F  M +  + P+   YN+
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 195 LMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           L+ GYCK   ++ A + Y EM     LQP +VTF  L+DG CK+G+L  A      M   
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390

Query: 254 GVFPNIFVYNCLI-----------------------------------DGHCKAGNLFEA 278
           G+  +   Y  LI                                    G CK GN+ +A
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 450

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            ++     K    P+  T+ IL + L  +G++E A+ L++      I A 
Sbjct: 451 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 226/430 (52%), Gaps = 7/430 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ F+ M+     P+ V +  L+  +          S+   M   G+ PN+YT + L++
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 198 GYCKV--ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            +C +    +  AL  + +M+    +P+VVT+G L++GLCKVG   AA      M +   
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+F YN +ID  CK   + EA +L SEM    ISPD+FTYN LI  LC + + +    
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 224

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQ 374
           LL +M    I+ +VV++N+++D  CKEG + +A  V  +M ++G   PNV+++++LI+G 
Sbjct: 225 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   ID AM L+ EM  + L+PD V ++ LI GL     +++ + L+ EM+     P++
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T   L+  L KN  ++ A+          +G    P+  +    I  +C  G++  A  
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALL----KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LFS++ S  L+PD  TY+ M+ GL R   + +   L  +M + G   +  I   + RG+ 
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 460

Query: 555 ENGDLKSAFR 564
            N +   A +
Sbjct: 461 RNNETSRAIQ 470



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 229/431 (53%), Gaps = 11/431 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           S FN +  ++ P   PS   F+ L+ + ++M H    L +  +++   + P I   + L+
Sbjct: 47  SSFNRMLRMQPP---PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103

Query: 92  NGL--IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           N    + +GK       +++M+  G   DVVTYG LI+  C  G+   A+ L   M+ K 
Sbjct: 104 NSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 163

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P V  Y  +I  LC + ++ EA ++F  M   G+ P+++TYN+L+   C + +     
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDG 268
              +EM+   + P+VV+F  ++D LCK G++  A +    M  + G  PN+  YN LI+G
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CK   + +AM L  EM + E+ PD  TY+ LI GLC V +L+ A  L  +M     + N
Sbjct: 284 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 343

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           +VTY  L+D  CK   + +A+++   +    ++P++   +  IDG C+AG ++AA  L++
Sbjct: 344 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 403

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            +  K L PDV  ++ +I+GL + G + E  +L++EM E   T +    +++  G  +N 
Sbjct: 404 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463

Query: 449 RISNALNFFLE 459
             S A+    E
Sbjct: 464 ETSRAIQLLQE 474



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 226/439 (51%), Gaps = 12/439 (2%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLC--NENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           L+L  +M   GI P +    ILI+  C  N  K+ EA  +F  M   G  P++ TY  L+
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLI 140

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +G CKV + + A+     M+  N QPNV  +  ++D LCK  ++  A N F  M   G+ 
Sbjct: 141 NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 200

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+IF YN LI   C         +L +EM   +I PDV ++N ++  LC  G++  A  +
Sbjct: 201 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 260

Query: 317 LQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + KM + G  + NV++YN+LI+GYCK   ++KA+ +  +M  + + P+ VT+S+LI G C
Sbjct: 261 VDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 320

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
               +  A+ L+ EMV  S +P++V +  L+D L K+  + E + L K +  + + P + 
Sbjct: 321 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 380

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             +  I G+ + G +  A + F   + K       P+   Y+ +I  LC  G + +ASKL
Sbjct: 381 VNNIAIDGMCRAGELEAARDLFSNLSSKG----LQPDVWTYSIMINGLCRRGLLDEASKL 436

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M  +    + C Y T+ RG LR       + LL +M+  G   DA    + V+   +
Sbjct: 437 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 496

Query: 556 NG---DLKSAFRCSEFLKE 571
           +G    LK   R  +F K+
Sbjct: 497 DGLDQSLKQILR--DFCKQ 513



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 203/437 (46%), Gaps = 49/437 (11%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEM--GHIEEALWVYRKI---EVLP 82
           K H    S+ + ++S  IP   P++++   LI +F  +  G I EAL ++ K+      P
Sbjct: 75  KHHSTLLSLSHQMDSFGIP---PNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRP 131

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            +     L+NGL K G   +       MV      +V  Y  +ID  C    V +A NLF
Sbjct: 132 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 191

Query: 143 DEMIDKGIEPTVVIYTILIHGLCN-----------------------------------E 167
            EM+ KGI P +  Y  LIH LCN                                   E
Sbjct: 192 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 251

Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            K+ EA  +   M +  G +PN+ +YN L++GYCK+  +++A+  + EM    L P+ VT
Sbjct: 252 GKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 311

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ GLC V  L+ A   F  M      PN+  Y  L+D  CK   L EAM+L   +E
Sbjct: 312 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 371

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+   NI I G+C  G+LE A  L   +  +G+  +V TY+ +I+G C+ G ++
Sbjct: 372 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 431

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M E G   N   ++++  G  +      A+ L  EMV +    D    T  +
Sbjct: 432 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 491

Query: 407 DGLSKDG---NMKETLR 420
             LS DG   ++K+ LR
Sbjct: 492 KMLSDDGLDQSLKQILR 508



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 11/400 (2%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N +  A S F  M      P+   +N L+    K+   +  L   H+M    + PN+ T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 228 GVLMDGLCKV--GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +L++  C +  G++  A + F  M   G  P++  Y  LI+G CK GN   A+ L   M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +    P+VF YN +I  LC   Q+  A  L  +M  +GI  ++ TYNSLI   C   + 
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS-LVPDVVVFTA 404
           +   ++ ++M +  + P+VV+F++++D  CK G +  A  +  +M+ +   +P+V+ +  
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI+G  K   + + + L+ EM   ++ P   T S+LIHGL    R+ +A+  F E     
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV--- 336

Query: 465 DGGYCS--PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
               CS  PN V Y  ++  LC +  + +A  L   +   NL PD       + G+ RA 
Sbjct: 337 ---ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 393

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +     L +++   G+ PD     +M+ G    G L  A
Sbjct: 394 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 433



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 8/307 (2%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALL 91
           V   LN +   K  P V  F+T++ A  + G + EA  V  K+      +P + + N L+
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NG  K  + D     + EM    L+ D VTY  LI   C    +  A+ LF EM+     
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +V Y IL+  LC    + EA ++ +++    + P++   N  +DG C+  ++  A + 
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           +  +    LQP+V T+ ++++GLC+ G L  A   F  M + G   N  +YN +  G  +
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--GILANV 329
                 A+ L  EM     S D  T  + +K L   G  +  + +L+   K+   I  NV
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENV 521

Query: 330 VTYNSLI 336
           +    +I
Sbjct: 522 MVLQEII 528


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 282/566 (49%), Gaps = 12/566 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIP-KFNPSVFSTLI 59
           I ++L+ A++YK  R  + +    L+   K +++  +V++ L S+     F+P+VF  ++
Sbjct: 138 IVHILSRARMYKEVRVYLNE----LVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMIL 193

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             F+E G  + AL V+    K   +P++++CN+LL+ L++ G+       YE+M+  G++
Sbjct: 194 KVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGIL 253

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            D+ +Y ++++  C +G V +A N   EM     EP VV Y  LI G  +   +  A+ +
Sbjct: 254 PDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKV 313

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M E G+  N  TY  L+ GYCK   + +A +    M+  NL  +   +GVL+   C 
Sbjct: 314 LALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCT 373

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A      M K G+  N  + N LI+G+CK G++ +A  +   M+ + + PD + 
Sbjct: 374 AGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYG 433

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN L+ G C       A  L  +M+ +G+   VVTYN+L+      G +E AL + + M 
Sbjct: 434 YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMH 493

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++GV PN VT+ +L+D   K G  D AM ++ + + K     + ++  +I G  K   + 
Sbjct: 494 KRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLV 553

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           +   ++ +M E    P   T  +LI G  K G +  AL   L+   + DG   S +  +Y
Sbjct: 554 QAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK--LKDMSERDG--ISSSTEMY 609

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            ++I  +    ++ K + L ++M++  L P+  TY +++ G      M         MI 
Sbjct: 610 NSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID 669

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            GI P+ +I   +V     +G +  A
Sbjct: 670 KGIAPNIIIGSKIVSSLYRHGKIDEA 695



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 259/581 (44%), Gaps = 78/581 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+  LI A+   G +++AL +     K+ +      CN+L+NG  K G  +   E    M
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM 422

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L  D   Y  L+D  C Q D +KA  L DEM +KG+  TVV Y  L+  L +   +
Sbjct: 423 KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMD--------------------------------- 197
             A  ++  M + GV PN  TY  L+D                                 
Sbjct: 483 EHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 198 --GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
             G+CK+  + +A E + +M      P+ +T+  L+DG CKVG L  A        + G+
Sbjct: 543 ICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +  +YN LI G  ++  L +   L +EM+  E+SP+V TY  LI G C  G ++ A  
Sbjct: 603 SSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYN 662

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-------------------- 355
              KM  +GI  N++  + ++    + G +++A  +  Q+                    
Sbjct: 663 AYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDL 722

Query: 356 ----TEKGVE-----------PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
               T+K V+            N + ++  I G CK+ NID    + +++++K   PD  
Sbjct: 723 RHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNY 782

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            + +LI   S  G + E   L  +M+ A + P++   ++LI+GL K+G +  A   F   
Sbjct: 783 TYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLF--- 839

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +K      SP  V Y  +I   C  G+  +A +L   MR + + P + TY+T++ GL  
Sbjct: 840 -NKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             +    + LL +M+K G    +V++ ++ R Y +  D +S
Sbjct: 899 EGKSEQSVGLLNEMMKAG-KGSSVMDPLVARAYVKWRDKQS 938



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 13/291 (4%)

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L S   +F  SP VF  ++++K     G  + A  +   M K G + ++ + NSL+    
Sbjct: 175 LVSVYREFSFSPTVF--DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           + G+  KAL V  QM   G+ P++ +++ +++  CK G +D A     EM      P+VV
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFF 457
            + +LIDG    G++    ++   M E  I  +  T + LI G  K G++  A   +   
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           +EK    D       HV Y  +I A C  G++  A ++   M    L+ +     +++ G
Sbjct: 353 MEKNLFVD------EHV-YGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSE 567
             +   +     +L  M    + PD+     ++ G+ +  D   AF+ C E
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 254/514 (49%), Gaps = 11/514 (2%)

Query: 62  FSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           F  +  +++A  ++R++   + LP+  + + LL  L+    + SV   + E+    +  D
Sbjct: 47  FENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVD 106

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                 +++ CC         ++      KGI    V +T LI GL  ENK+ +A  +F+
Sbjct: 107 AFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFK 166

Query: 179 SM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            + RE    P+   Y  +MDG CK     +A +    M     +P+   + +++D  CK 
Sbjct: 167 KLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKD 226

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G L  A +    M +  + P+I  Y  LIDG  K     +  +L  EM    I PDV T+
Sbjct: 227 GMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTF 286

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N +I GLC  G++E AE ++  M ++G+  N +TYN ++DGYC  G M +A  +   M +
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMID 346

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+EP+++++++LI+G  +   +D AM L+ E+    L P +V  + L+ GL + G  + 
Sbjct: 347 KGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTEC 406

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
               + EM  A   P+++T  +L+ G FKNG +  A++ F +   + +      N  +Y 
Sbjct: 407 AKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE----DTNIQIYT 462

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A+I  LC +G++ KA   F  +    L PD  TYT M+ G  +   + +   +L  M   
Sbjct: 463 AVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           G +PD     V+VRG+  +  +        FLKE
Sbjct: 523 GCLPDNRTYNVIVRGFFRSSKVSEM---KAFLKE 553



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 220/422 (52%), Gaps = 5/422 (1%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDS 102
           IP +N   F+TLI        +++A+ +++K+       P       +++GL KKG    
Sbjct: 138 IP-YNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
            ++    M       D   Y ++ID  C  G +  A +L +EM  K I P ++ YT LI 
Sbjct: 197 AFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GL   ++  +  ++F  M    + P++ T+N+++DG CK   V  A E    M+   ++P
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEP 316

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N +T+ V+MDG C  G++  A   F  M   G+ P+I  Y  LI+G+ +   + +AM L 
Sbjct: 317 NEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLF 376

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            E+ +  + P + T ++L++GL  VG+ E A+    +M   G + N+ T+ +L+ GY K 
Sbjct: 377 REISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKN 436

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +E+A+S   ++  +  + N+  ++++I+G CK G +D A   + ++ +  L PDV+ +
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           TA+I G  ++G + E   + ++M +    P   T + ++ G F++ ++S    F  E   
Sbjct: 497 TAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAG 556

Query: 463 KT 464
           K+
Sbjct: 557 KS 558



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 209/382 (54%), Gaps = 5/382 (1%)

Query: 39  FNALNSLE--IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           F+ L  +E  I K +  +++ +I AF + G ++ A  +  +++   + P I    +L++G
Sbjct: 198 FDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDG 257

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  +++ V   + EM+   +  DV T+  +ID  C +G V  A  +   MI+KG+EP 
Sbjct: 258 LGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPN 317

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            + Y +++ G C   +M  A  +F SM + G+ P++ +Y AL++GY +   +++A++ + 
Sbjct: 318 EITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFR 377

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+  + L+P++VT  VL+ GL +VG    A  FF  M   G  PN++ +  L+ G+ K G
Sbjct: 378 EISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNG 437

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + EAMS   ++E+     ++  Y  +I GLC  G+L+ A    +K+   G+  +V+TY 
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I GYC+EG +++A  +  +M + G  P+  T++ ++ G  ++  +        E+  K
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGK 557

Query: 394 SLVPDVVVFTALIDGLSKDGNM 415
           S   +      L+D +++D ++
Sbjct: 558 SFSFEAATVELLMDIIAEDPSL 579



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 151/332 (45%), Gaps = 15/332 (4%)

Query: 244 GNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFE-------AMSLCSEMEKFEISPD 293
           GN F     + + P  +  N     + G+    N FE       A SL  +M   +  P 
Sbjct: 12  GNPFFSFFAYSIAPRHYSTNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTTKPLPS 71

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +++ L+K L  +        + ++++K  I  +    +++++  C     +   SV +
Sbjct: 72  AVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLA 131

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKD 412
              +KG+  N VTF++LI G      +  A+ L+ ++V +++  PD V++  ++DGL K 
Sbjct: 132 IHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKK 191

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G+ ++   L + M +    P     + +I    K+G +  A +   E   K       P+
Sbjct: 192 GHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN----IPPD 247

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y ++I  L    Q  K   LF +M   N+ PD CT+ +++ GL +  ++ D   ++ 
Sbjct: 248 IITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMT 307

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            MI+ G+ P+ +   V++ GY   G +  A R
Sbjct: 308 YMIEKGVEPNEITYNVVMDGYCLRGQMGRARR 339


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 250/518 (48%), Gaps = 8/518 (1%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  E+A   L   R+   +P++ + N++L  L KK K D     +E M
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +  TY ++ID  C  G V +A  + DEM    + P ++   I++  LC   K+
Sbjct: 247 KK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 305

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F S  + G  P+  TY +L+DG  K   V+ A   + +ML      N V +  L
Sbjct: 306 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +      G        F  + + G  P++ + N  +D   KAG + +   +  ++  +  
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV +Y+ILI GL   GQ      +   M ++G   +   YN+++DG+CK G + KA  
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 485

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M EK V+P V T+ +++DG  K   +D A  L+ E   K +  +VV++++LIDG  
Sbjct: 486 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 545

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +EM++  +TP+V+T +SL+  L K   I+ AL  F    +      C 
Sbjct: 546 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK----CP 601

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y+ +I  LC   +  KA   + DM+   L P+  TYTTM+ GL +   + D   L
Sbjct: 602 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 661

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
                  G +PDA     ++ G         A++ + +
Sbjct: 662 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVY 699



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 235/459 (51%), Gaps = 9/459 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           S+F  +     P  N S ++ +I      G +EEA  +  ++E   + P +   N +++ 
Sbjct: 241 SLFEVMKKDAEP--NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 298

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L K  K +  ++ +E     G   D VTY  LID    +G V +A  LF++M+D G    
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 358

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V+YT LI       +  +   +F+ +   G  P+L   N  MD   K  +V +    + 
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           ++  +   P+V ++ +L+ GL K G+ R   N F  M + G   +   YN ++DG CK+G
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + +A  +  EM++  + P V TY  ++ GL  + +L+ A  L ++   +GI  NVV Y+
Sbjct: 479 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           SLIDG+ K G +++A  +  +M +KG+ PNV T++SL+D   KA  I+ A+  +  M   
Sbjct: 539 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 598

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              P+   ++ LI+GL +     +    +++M +  + P+V T +++I GL K G I++A
Sbjct: 599 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 658

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            + F  +  K +GG   P+   + A+I+ +    + ++A
Sbjct: 659 YSLF--ERFKANGGI--PDAASFNALIEGMSNANRAMEA 693



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 248/520 (47%), Gaps = 10/520 (1%)

Query: 49  KFNP--SVFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSV 103
           KF P  S ++ LI A +E    E AL + R+++ +     +     L+  L ++G+    
Sbjct: 40  KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 99

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               +E+    L  D+V Y V IDC    G+V  A   F E+  +G++P  V YT +I  
Sbjct: 100 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWV 159

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   ++ EAE +F  M     VP  Y YN ++ GY        A +    +      P+
Sbjct: 160 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VV+F  ++  L K  ++  A + F  M K    PN   YN +ID  C  G + EA  +  
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILD 278

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EME   + P++ T NI++  LC   +LE A  + +   + G   + VTY SLIDG  K+G
Sbjct: 279 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 338

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +++A  +  +M + G   N V ++SLI      G  +    ++ E++ +   PD+ +  
Sbjct: 339 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLN 398

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             +D + K G +++   +++++      P V + S LIHGL K G+     N F     +
Sbjct: 399 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 458

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              G+ + +   Y A++   C  G++ KA ++  +M+   ++P   TY  ++ GL +  R
Sbjct: 459 ---GF-ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + +  ML  +    GI  + V+   ++ G+ + G +  A+
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 250/523 (47%), Gaps = 8/523 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+TL+ A +  G + +AL +  +++   + P I   N  ++   K G  D   +F+ E+
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D V+Y  +I   C  G + +A  LF +M  +   P    Y  +I G  +  + 
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   +RE G +P++ ++N+++    K   V+ AL  + E++  + +PN  T+ ++
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 260

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LC  G +  A      M    +FPN+   N ++D  CKA  L EA  +     +   
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +PD  TY  LI GL   GQ++ A  L +KM   G  AN V Y SLI  +   G  E    
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  ++  +G +P++   ++ +D   KAG ++    ++ ++     +PDV  ++ LI GL+
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G  +ET  ++  M +          ++++ G  K+G++  A     E  +K       
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC----VQ 496

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P    Y AI+  L    ++ +A  LF + +S  +  +   Y++++ G  +  R+ +  ++
Sbjct: 497 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           L +M+K G+ P+      ++    +  ++  A  C + +KE +
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 241/519 (46%), Gaps = 8/519 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++++I    + G + EA  ++ ++E    +P   A N ++ G    G+F+  ++  E + 
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 212

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G +  VV++  ++ C   +  V +AL+LF E++ K  EP    Y I+I  LC   ++ 
Sbjct: 213 ERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVE 271

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M    + PNL T N ++D  CK   +  A + +         P+ VT+  L+
Sbjct: 272 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 331

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGL K G++  A   F  M   G   N  VY  LI      G   +   +  E+ +    
Sbjct: 332 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCK 391

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+   N  +  +   G++E    + + +   G L +V +Y+ LI G  K G   +  ++
Sbjct: 392 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 451

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M ++G   +   +++++DG CK+G +  A  +  EM  K + P V  + A++DGL+K
Sbjct: 452 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 511

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + E   L++E     I  +V   SSLI G  K GRI  A     E   K      +P
Sbjct: 512 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG----LTP 567

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   + +++ AL    +I +A   F  M+     P+  TY+ ++ GL R ++     +  
Sbjct: 568 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 627

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            DM K G+VP+ V    M+ G  + G++  A+   E  K
Sbjct: 628 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 666



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 203/455 (44%), Gaps = 38/455 (8%)

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P    YT+LI  L    +   A  + R M+E G    ++ +  L+    +   V  AL 
Sbjct: 42  RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              E+    L+P++V + V +D   K G +  A  FF  +   G+ P+   Y  +I   C
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           KAG L EA  L ++ME     P  + YN +I G    G+ E A  LL+++ + G + +VV
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221

Query: 331 ----------------------------------TYNSLIDGYCKEGDMEKALSVCSQMT 356
                                             TYN +ID  C  G +E+A  +  +M 
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 281

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
              + PN++T + ++D  CKA  ++ A  ++     +   PD V + +LIDGL K G + 
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 341

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  RL+++ML+A    +    +SLI   F +GR  +    F E   +     C P+  L 
Sbjct: 342 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG----CKPDLTLL 397

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
              +  +   G++ K   +F D+RS    PD  +Y+ ++ GL +A +  +   +   M +
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 457

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            G   DA     +V G+ ++G +  A+   E +KE
Sbjct: 458 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 4/200 (2%)

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A+   + M      P    ++ LI    +A   + A+ L  +M        V +FT 
Sbjct: 26  LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+  L+++G + + L L  E+  + + P +   +  I    K G +  A  FF E   K 
Sbjct: 86  LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL--KA 143

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
            G    P+ V Y ++I  LC  G++ +A +LF+ M ++   P    Y TM+ G   A R 
Sbjct: 144 QG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 525 LDVMMLLADMIKMGIVPDAV 544
            D   LL  + + G +P  V
Sbjct: 202 EDAYKLLERLRERGCIPSVV 221


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 5/491 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N +L+   K+G+ D   E   EM   G   + VTY VL++    +G++ +A  L
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +EM++ G+  +   Y  LI+G C +   VEA  +   M      P L TYN LM G CK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V      + +ML     P++V+F  L+ G C+ G +  A   F  +    + P +  
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C  G L  A+ L  EM    + PD+FTY IL+ G   +G +  A G   +M 
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+  +   YN+ I G  K  D   A S+  +M   G  P+V+T++  +   C+ GN +
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L   MV   L+PD V +T++I+G  K+G++++   ++ EML   + PSV T + LI
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           H       +  A  +F +  +K+       N + Y AII  LC   ++ +A K F +M  
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKS----VPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + P+  +YT ++          + + L  +M+   I PD+  + V ++    +  +  
Sbjct: 629 KGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH- 687

Query: 562 AFRCSEFLKES 572
           A +C E L ++
Sbjct: 688 AVQCVESLIQN 698



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 248/512 (48%), Gaps = 7/512 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           +LP ++ CN +L  L  +         Y  M   G+   VVTY  ++D  C +G V +AL
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  EM ++G  P  V Y +L++GL  + ++ +A+ +   M   G+  + YTYN L++G+
Sbjct: 236 ELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+      A +   EM++    P + T+  LM GLCK  ++      F  M K    P+I
Sbjct: 296 CQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDI 355

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N L+ G+C+ G + EA  L  E++  ++ P V TYN LI GLC  G L+ A  L ++
Sbjct: 356 VSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE 415

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G+  ++ TY  L++G  K G +  A    ++M  KG++P+   +++ I G+ K  +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIAD 475

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A  +  EM+     PDV+ +   +  L + GN +E   L + M+   + P   T +S
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I+G  KNG +  A   F E   K      +P+ V Y  +I A      +  A   FS M
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKG----VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              ++  +  TY  ++ GL   +RM +      +M + GI+P+     +++      G  
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651

Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           + A R    + + +I   + +  T   FL +L
Sbjct: 652 EEALRLYREMLDRKI---QPDSFTHSVFLKNL 680



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 217/425 (51%), Gaps = 4/425 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L +FD+MI  G+ P V     ++  L +EN + +A++++  M + G+ P + TYN ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCK   V++ALE   EM      PN VT+ VL++GL K GEL  A      M   G+  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            + YN LI+G C+ G   EA  L  EM      P + TYN L+ GLC   Q+ G      
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M K     ++V++NSL+ GYC+ G + +A  +  ++  + + P V+T+++LI G C  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +DAA+ L  EM  + L PD+  +T L++G  K G +      + EML   + P  F  +
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + I G  K    S A   F  + +    G+  P+ + Y   + ALC  G   +A  L  +
Sbjct: 465 TRIVGEMKIADTSVA---FSMQEEMLAAGF-PPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M SD L PD+ TYT+++ G ++   +     +  +M+  G+ P  V   V++  +     
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 559 LKSAF 563
           L  AF
Sbjct: 581 LDLAF 585



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 245/507 (48%), Gaps = 53/507 (10%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE- 79
           ENLL   K         N    +E     P+V  ++T++ ++ + G +++AL +  +++ 
Sbjct: 193 ENLLSKAK---------NVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243

Query: 80  --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
               P     N L+NGL KKG+ +      EEM+  GL     TY  LI+  C +G  ++
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +L +EM+++   PT+  Y  L++GLC   ++      F  M +    P++ ++N+L+ 
Sbjct: 304 AFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLY 363

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC+   ++ A   + E+   +L P V+T+  L+ GLC  G L AA      M   G+FP
Sbjct: 364 GYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFP 423

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEM-------EKFE--------------------- 289
           +IF Y  L++G  K G +  A    +EM       ++F                      
Sbjct: 424 DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483

Query: 290 -------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
                    PDV TYN+ +  LC  G  E A  LL+ M  +G++ + VTY S+I+G+ K 
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKN 543

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G + KA  V ++M  KGV P+VVT++ LI        +D A   +++M+ KS+  +V+ +
Sbjct: 544 GHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITY 603

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            A+I+GL     M E  + + EM E  I P+ F+ + LI+     G    AL  + E  D
Sbjct: 604 NAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLD 663

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +       P+   ++  ++ L  D Q+
Sbjct: 664 RK----IQPDSFTHSVFLKNLHRDYQV 686



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 39/255 (15%)

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  KM + G+L +V   N ++     E  + KA +V   M + G++P VVT+++++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +D A+ L +EM  +   P+ V +  L++GLSK G +++   L +EML + +  S +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + LI+G                                        C  G  ++A  L
Sbjct: 287 TYNPLINGF---------------------------------------CQKGLFVEAFDL 307

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M +    P   TY T++ GL +  ++  V +  +DM+K    PD V    ++ GY  
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCR 367

Query: 556 NGDLKSAFRCSEFLK 570
            G +  AF   + LK
Sbjct: 368 TGCISEAFLLFDELK 382



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 4/155 (2%)

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L ++ +M+   + P V   + ++  L     +S A N +       +     P  V Y  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVY----GMMEQFGIKPTVVTYNT 220

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++ + C +G++ +A +L S+M+     P++ TY  ++ GL +   +     L+ +M+  G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           +   A     ++ G+ + G    AF   E +   R
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 235/488 (48%), Gaps = 5/488 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N +L+   K+G+ D   E   EM   G   + VTY VL++    +G++ +A  L
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +EM++ G+  +   Y  LI+G C +   VEA  +   M      P L TYN LM G CK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V      + +ML     P++V+F  L+ G C+ G +  A   F  +    + P +  
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C  G L  A+ L  EM    + PD+FTY IL+ G   +G +  A G   +M 
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+  +   YN+ I G  K  D   A S+  +M   G  P+V+T++  +   C+ GN +
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L   MV   L+PD V +T++I+G  K+G++++   ++ EML   + PSV T + LI
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           H       +  A  +F +  +K+       N + Y AII  LC   ++ +A K F +M  
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKS----VPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + P+  +YT ++          + + L  +M+   I PD+  + V ++    +  +  
Sbjct: 629 KGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH- 687

Query: 562 AFRCSEFL 569
           A +C E L
Sbjct: 688 AVQCVESL 695



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 248/512 (48%), Gaps = 7/512 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           +LP ++ CN +L  L  +         Y  M   G+   VVTY  ++D  C +G V +AL
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  EM ++G  P  V Y +L++GL  + ++ +A+ +   M   G+  + YTYN L++G+
Sbjct: 236 ELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+      A +   EM++    P + T+  LM GLCK  ++      F  M K    P+I
Sbjct: 296 CQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDI 355

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N L+ G+C+ G + EA  L  E++  ++ P V TYN LI GLC  G L+ A  L ++
Sbjct: 356 VSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE 415

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G+  ++ TY  L++G  K G +  A    ++M  KG++P+   +++ I G+ K  +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIAD 475

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A  +  EM+     PDV+ +   +  L + GN +E   L + M+   + P   T +S
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I+G  KNG +  A   F E   K      +P+ V Y  +I A      +  A   FS M
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKG----VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM 591

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              ++  +  TY  ++ GL   +RM +      +M + GI+P+     +++      G  
Sbjct: 592 LEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651

Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           + A R    + + +I   + +  T   FL +L
Sbjct: 652 EEALRLYREMLDRKI---QPDSFTHSVFLKNL 680



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 216/423 (51%), Gaps = 4/423 (0%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +FD+MI  G+ P V     ++  L +EN + +A++++  M + G+ P + TYN ++D YC
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V++ALE   EM      PN VT+ VL++GL K GEL  A      M   G+  + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LI+G C+ G   EA  L  EM      P + TYN L+ GLC   Q+ G       M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K     ++V++NSL+ GYC+ G + +A  +  ++  + + P V+T+++LI G C  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           DAA+ L  EM  + L PD+  +T L++G  K G +      + EML   + P  F  ++ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  K    S A   F  + +    G+  P+ + Y   + ALC  G   +A  L  +M 
Sbjct: 467 IVGEMKIADTSVA---FSMQEEMLAAGF-PPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           SD L PD+ TYT+++ G ++   +     +  +M+  G+ P  V   V++  +     L 
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 561 SAF 563
            AF
Sbjct: 583 LAF 585



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 245/507 (48%), Gaps = 53/507 (10%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE- 79
           ENLL   K         N    +E     P+V  ++T++ ++ + G +++AL +  +++ 
Sbjct: 193 ENLLSKAK---------NVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243

Query: 80  --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
               P     N L+NGL KKG+ +      EEM+  GL     TY  LI+  C +G  ++
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +L +EM+++   PT+  Y  L++GLC   ++      F  M +    P++ ++N+L+ 
Sbjct: 304 AFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLY 363

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC+   ++ A   + E+   +L P V+T+  L+ GLC  G L AA      M   G+FP
Sbjct: 364 GYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFP 423

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEM-------EKFE--------------------- 289
           +IF Y  L++G  K G +  A    +EM       ++F                      
Sbjct: 424 DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483

Query: 290 -------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
                    PDV TYN+ +  LC  G  E A  LL+ M  +G++ + VTY S+I+G+ K 
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKN 543

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G + KA  V ++M  KGV P+VVT++ LI        +D A   +++M+ KS+  +V+ +
Sbjct: 544 GHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITY 603

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            A+I+GL     M E  + + EM E  I P+ F+ + LI+     G    AL  + E  D
Sbjct: 604 NAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLD 663

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +       P+   ++  ++ L  D Q+
Sbjct: 664 RK----IQPDSFTHSVFLKNLHRDYQV 686



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 39/255 (15%)

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +  KM + G+L +V   N ++     E  + KA +V   M + G++P VVT+++++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +D A+ L +EM  +   P+ V +  L++GLSK G +++   L +EML + +  S +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + LI+G                                        C  G  ++A  L
Sbjct: 287 TYNPLINGF---------------------------------------CQKGLFVEAFDL 307

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M +    P   TY T++ GL +  ++  V +  +DM+K    PD V    ++ GY  
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCR 367

Query: 556 NGDLKSAFRCSEFLK 570
            G +  AF   + LK
Sbjct: 368 TGCISEAFLLFDELK 382



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 4/155 (2%)

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L ++ +M+   + P V   + ++  L     +S A N +       +     P  V Y  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVY----GMMEQFGIKPTVVTYNT 220

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++ + C +G++ +A +L S+M+     P++ TY  ++ GL +   +     L+ +M+  G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           +   A     ++ G+ + G    AF   E +   R
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 287/641 (44%), Gaps = 116/641 (18%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
             P+V  ++TLI A+ +   I++   +Y ++    V+P +  C+++L GL + GK     
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA 291

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               EM   GL  + V+Y  +I      G VM+A N   +M+ +GI   +V+ T ++ GL
Sbjct: 292 MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGL 351

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV------------------- 205
               K  EAE MF+++ +  +VPN  TY AL+DG+CKV DV                   
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNV 411

Query: 206 ----------------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
                           N+A+E   +M+  N+ PNV  + +L+DG  + G+  AA  F+  
Sbjct: 412 VTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE 471

Query: 250 MAKFG-----------------------------------VFPNIFVYNCLIDGHCKAGN 274
           M  +G                                   ++ ++F Y+ L+DG+ K GN
Sbjct: 472 MKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A+S+  EM + ++  DV  YN L KGL  +G+ E  + +  +M + G+  + VTYNS
Sbjct: 532 ESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNS 590

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +++ Y  +G  E AL + ++M   GV PN+VT++ LI G CK G I+  + +  EM+   
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYK------------------------------- 423
            VP  ++   L+   S+       L+++K                               
Sbjct: 651 YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKAN 710

Query: 424 ----EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
               EM+   I+  + T ++LI G      +  A N + +          SPN   Y A+
Sbjct: 711 VVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSG----ISPNITTYNAL 766

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           ++ L  +G +  A KL S+MR   L P+  TY  ++ G  R     D + L  +MI  G 
Sbjct: 767 LEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGF 826

Query: 540 VPDAVINQVMVRGYQENGDLKSAFR-CSEFLKESRIGSSET 579
           +P      V+++ Y + G ++ A    +E L   RI +S T
Sbjct: 827 IPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSST 867



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 275/562 (48%), Gaps = 56/562 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
           F+    + L+  + ++G ++ A W+   +      L AI   N L++G  + G      +
Sbjct: 108 FDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAI-GLNTLVDGYCEVGLVSRALD 166

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI------------DKGIE-- 151
             E+    G+  D+VTY  L++  C +GD+ KA ++ +E++            D G+E  
Sbjct: 167 LVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETW 226

Query: 152 -------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
                  PTVV +T LI   C    + +  S++  M   GV+P++ T ++++ G C+   
Sbjct: 227 DGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGK 286

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +  A     EM +  L PN V++  ++  L K G +  A N    M   G+  ++ +   
Sbjct: 287 LTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTT 346

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           ++DG  KAG   EA  +   + K  + P+  TY  L+ G C VG +E AE +LQKM KE 
Sbjct: 347 MMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEH 406

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +L NVVT++S+I+GY K+G + KA+ V  +M +  + PNV  ++ L+DG  + G  +AA 
Sbjct: 407 VLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAA 466

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           G Y EM    L  + ++F  L++ L + G MKE   L K++L   I   VF  SSL+ G 
Sbjct: 467 GFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGY 526

Query: 445 FKNGRISNALNFFLEKTDKTD-----------------GGY-------------CSPNHV 474
           FK G  S AL+   E T+K                   G Y              +P+ V
Sbjct: 527 FKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCV 586

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y +++      G+   A  L ++M+S  + P+  TY  ++ GL +   +  V+ +L +M
Sbjct: 587 TYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646

Query: 535 IKMGIVPDAVINQVMVRGYQEN 556
           + +G VP  +I++ +++ Y  +
Sbjct: 647 LAVGYVPTPIIHKFLLKAYSRS 668



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 258/547 (47%), Gaps = 55/547 (10%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R + ++P++   N LL      G    V   Y EMVLCG+V +V +  +L+   C  GD+
Sbjct: 2   RALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDL 61

Query: 136 MKAL------------------------------NLFDEMIDKGIEPTVVIYTILIHGLC 165
             AL                               L  EM+ KG+    V   IL+ G C
Sbjct: 62  GLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 121

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +  AE +  ++   GV  +    N L+DGYC+V  V+RAL+   +   + ++P++V
Sbjct: 122 QIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIV 181

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKF------GVF---------------PNIFVYNC 264
           T+  L++  CK G+L  A +    +  F      GV                P +  +  
Sbjct: 182 TYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTT 241

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI  +CK   + +  SL  +M    + PDV T + ++ GLC  G+L  A  LL++MY  G
Sbjct: 242 LIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG 301

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  N V+Y ++I    K G + +A +  SQM  +G+  ++V  ++++DG  KAG    A 
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++  ++  +LVP+ V +TAL+DG  K G+++    + ++M +  + P+V T SS+I+G 
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGY 421

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G ++ A+   L K  + +     PN  +YA ++      GQ   A+  + +M+S  L
Sbjct: 422 AKKGMLNKAVE-VLRKMVQMN---IMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGL 477

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +N  +  +L  L R+  M +   L+ D++  GI  D      ++ GY + G+  +A  
Sbjct: 478 EENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALS 537

Query: 565 CSEFLKE 571
             + + E
Sbjct: 538 VVQEMTE 544



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 237/512 (46%), Gaps = 59/512 (11%)

Query: 13  NARCLIKDV--TENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE 70
           +  C + DV   E +L+  +  HV            +P  N   FS++I  +++ G + +
Sbjct: 384 DGHCKVGDVEFAETVLQKMEKEHV------------LP--NVVTFSSIINGYAKKGMLNK 429

Query: 71  ALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL------------ 115
           A+ V RK+    ++P +     LL+G  + G+ ++   FY+EM   GL            
Sbjct: 430 AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN 489

Query: 116 -----------------------VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
                                    DV  Y  L+D    +G+   AL++  EM +K ++ 
Sbjct: 490 NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQF 549

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            VV Y  L  GL    K  E +S+F  M E G+ P+  TYN++M+ Y        AL+  
Sbjct: 550 DVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLL 608

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           +EM  + + PN+VT+ +L+ GLCK G +    +    M   G  P   ++  L+  + ++
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRS 668

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
                 + +  ++    ++ +   YN LI  LC +G  + A  +L +M  +GI A++VTY
Sbjct: 669 RKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTY 728

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LI GYC    +EKA +  SQM   G+ PN+ T+++L++G    G +  A  L +EM  
Sbjct: 729 NALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE 788

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + LVP+   +  L+ G  + GN +++++LY EM+     P+  T + LI    K G++  
Sbjct: 789 RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQ 848

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           A     E   +       PN   Y  +I   C
Sbjct: 849 ARELLNEMLTRGR----IPNSSTYDVLICGWC 876



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 207/404 (51%), Gaps = 30/404 (7%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR   +VP+L  +N L+  +     V++    Y EM+   + PNV +  +L+  LCKVG+
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           L  A  +     +  VF ++  YN ++ G CK G   +   L SEM K  +  D  T NI
Sbjct: 61  LGLALGYL----RNSVFDHV-TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+KG C +G ++ AE ++  +   G+  + +  N+L+DGYC+ G + +AL +     + G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV---------------------IKSLVPD 398
           V+P++VT+++L++  CK G++  A  +  E++                     ++ L P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV +T LI    K   + +   LY++M+ + + P V T SS+++GL ++G+++ A     
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E  +        PNHV Y  II AL   G++++A    S M    +  D    TTM+ GL
Sbjct: 296 EMYNMG----LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGL 351

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +A +  +   +   ++K+ +VP+ V    ++ G+ + GD++ A
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFA 395



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 200/414 (48%), Gaps = 16/414 (3%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S+L+  + + G+   AL V +++   ++   + A NAL  GL++ GK++     +  M+
Sbjct: 519 YSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMI 577

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  D VTY  +++    QG    AL+L +EM   G+ P +V Y ILI GLC    + 
Sbjct: 578 ELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIE 637

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +  S+   M   G VP    +  L+  Y +    +  L+ + +++   L  N + +  L+
Sbjct: 638 KVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLI 697

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LC++G  + A      M   G+  +I  YN LI G+C   ++ +A +  S+M    IS
Sbjct: 698 TVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGIS 757

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ TYN L++GL   G +  A+ L+ +M + G++ N  TYN L+ G+ + G+   ++ +
Sbjct: 758 PNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKL 817

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI----- 406
             +M  KG  P   T++ LI    KAG +  A  L  EM+ +  +P+   +  LI     
Sbjct: 818 YCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877

Query: 407 -------DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
                  D L K     E  +L +EM E    PS  T+  +       G+  +A
Sbjct: 878 LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDA 931


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 243/498 (48%), Gaps = 11/498 (2%)

Query: 48  PKFNPSVFSTLIIAF---SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           P    + ++ LI A    +++ H +  L +  +    P     N+L+ G  +  + +   
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + +M   G   D V+Y  LI+  C  G + +AL LF EM     +P +  +  L+ GL
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGL 240

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  E   M + M+E G  P    Y AL+D +C+      A +  +EM    L P V
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT  ++++  C+ G +  A   F  M   G  PN++ YN ++ G C AG +++AM+L  +
Sbjct: 301 VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ 360

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +  + PDV TYN+LI+G C  G +  A  LL+ M   G+ A+  TYN LID  CK G 
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A S+   +  +G+ PN VTF+++I+G CKAG  D A      M+     PD   ++ 
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I+ L K    +E L    EML+  + PS    + +I+ LF       A   + +   + 
Sbjct: 481 FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               CSP+ V Y   ++A C +G++ +A  + ++M+      D   Y T++ G     + 
Sbjct: 541 ----CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596

Query: 525 LDVMMLLADMIKMGIVPD 542
              + +L  M  +  +P+
Sbjct: 597 DRAVTILKHMTGVASMPN 614



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 204/454 (44%), Gaps = 8/454 (1%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            TY  LI   C + D+  A      M+  G  P    +  LI G C   ++  A  +F  
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G   +  +Y AL++G+C+   ++ ALE + EM     QP++ T   L+ GLC  G 
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGR 245

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                     M + G  P    Y  L+D  C+     EA  + +EM    + P V T  I
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI 305

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++   C  G++ GA  + + M  +G   NV TYN+++ G+C  G + KA+++  QM E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           VEP+VVT++ LI GQC  G+I +A  L   M    L  D   +  LID L K G + E  
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L+  +    I P+  T +++I+GL K G+   A  F     +    GY +P+   Y+  
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFL---ENMISAGY-APDTYTYSPF 481

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I+ LC      +      +M   +++P    YT ++  L   +       +   M+  G 
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
            PD V     VR Y   G L  A      +K+ R
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 246/545 (45%), Gaps = 28/545 (5%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + L+    + G  EE L + +K++ L   P  +A  AL++   ++ K +   +   EM  
Sbjct: 234 AALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFD 293

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL+  VVT  ++++  C +G +  A+ +F+ M  KG EP V  Y  ++ G CN  K+ +
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYK 353

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A ++   MRECGV P++ TYN L+ G C    +  A      M  + L  +  T+ VL+D
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLID 413

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LCK G++  A + F  +   G+ PN   +N +I+G CKAG    A +    M     +P
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D +TY+  I+ LC     +     + +M ++ +  + V Y  +I+    E +   A  + 
Sbjct: 474 DTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIW 533

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            QM  +G  P+VVT+++ +   C  G +D A  + TEM     + D + +  LIDG +  
Sbjct: 534 GQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSI 593

Query: 413 GNMKETLRLYKEMLEAKITPSVFT----------------VSSLIHGLFKNGRISNALNF 456
           G     + + K M      P+ FT                V      ++K   +++    
Sbjct: 594 GQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFEL 653

Query: 457 F-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           F L K +       +     Y +I++    + ++ + + L S M+ +NL  +   Y  ++
Sbjct: 654 FELMKKNSVPSSART-----YLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALV 708

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
               + +   D   LL  MI  G +P+ +  Q ++ G    G    A R  E  + SR  
Sbjct: 709 NCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEG---QADRAKEIFRSSRWK 765

Query: 576 SSETE 580
              T+
Sbjct: 766 EYNTD 770



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 190/407 (46%), Gaps = 9/407 (2%)

Query: 139 LNLFDEMIDKGIE-PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           L LF  M       PT   Y  LI  LC    +  A+     M   G  P+ +T+N+L+ 
Sbjct: 113 LRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC+   +  A + + +M       + V++  L++G C+ G +  A   F  M +    P
Sbjct: 173 GYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----P 228

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +++ +  L+ G C AG   E + +  +M++    P    Y  L+   C   + E AE +L
Sbjct: 229 DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M+  G++  VVT   +++ YC+EG M  A+ V   M  KG EPNV T+++++ G C A
Sbjct: 289 NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNA 348

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  AM L  +M    + PDVV +  LI G   DG++    RL + M    +    +T 
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTY 408

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI  L K G++  A + F    D  +     PN V +  +I  LC  G+   A     
Sbjct: 409 NVLIDALCKTGKVDEACSLF----DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           +M S    PD  TY+  +  L + K   + +  + +M++  + P  V
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 186/381 (48%), Gaps = 14/381 (3%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R     P   TYNAL+   C+ AD+  A  +   M+    +P+  TF  L+ G C+  +L
Sbjct: 121 RHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQL 180

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A + F  M   G   +   Y  LI+G C+AG + EA+ L  EM +    PD++T+  L
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAAL 236

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           +KGLC  G+ E    +LQKM + G       Y +L+D +C+E   E+A  + ++M + G+
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P VVT + +++  C+ G +  A+ ++  M  K   P+V  + A++ G    G + + + 
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  +M E  + P V T + LI G   +G I +A           +G   + +   Y  +I
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL----RLMEGNGLAADQYTYNVLI 412

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            ALC  G++ +A  LF  +    +RP++ T+ T++ GL +A +       L +MI  G  
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472

Query: 541 PDA------VINQVMVRGYQE 555
           PD       + N    +G QE
Sbjct: 473 PDTYTYSPFIENLCKTKGSQE 493



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 211/488 (43%), Gaps = 47/488 (9%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P +  C  ++N   ++G+       +E M   G   +V TY  ++   C  G V KA+
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L D+M + G+EP VV Y +LI G C +  +  A  + R M   G+  + YTYN L+D  
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V+ A   +  + +  ++PN VTF  +++GLCK G+   A  F  +M   G  P+ 
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y+  I+  CK     E +    EM + ++ P    Y I+I  L        A  +  +
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G   +VVTY + +  YC EG +++A +V ++M +     + + +++LIDG    G 
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595

Query: 380 IDAAMGLYTEMVIKSLVPDVVVF----------------TALIDGLSKDGNMKETLRLYK 423
            D A+ +   M   + +P+   F                      + K   + +   L++
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFE 655

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGR---------------------ISNAL-NFFLEKT 461
            M +  +  S  T  S++ G  +  R                     I NAL N F +  
Sbjct: 656 LMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLR 715

Query: 462 DKTDGG--YCS-------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
             +D     CS       PN + Y  ++  L  +GQ  +A ++F   R      D   + 
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775

Query: 513 TMLRGLLR 520
            ++ G +R
Sbjct: 776 VIIDGFIR 783



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 200/489 (40%), Gaps = 62/489 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ ++  F   G + +A+ +    R+  V P +   N L+ G    G   S +   
Sbjct: 334 NVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL 393

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GL AD  TY VLID  C  G V +A +LFD +  +GI P  V +  +I+GLC  
Sbjct: 394 RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKA 453

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K   A +   +M   G  P+ YTY+  ++  CK       L F  EML  +++P+ V +
Sbjct: 454 GKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNY 513

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            ++++ L        A   +  M   G  P++  Y   +  +C  G L EA ++ +EM+K
Sbjct: 514 TIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKK 573

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY-------------------------- 321
                D   YN LI G   +GQ + A  +L+ M                           
Sbjct: 574 CRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEH 633

Query: 322 -------------------------KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
                                    K  + ++  TY S+++G+ +E  +++  S+ S M 
Sbjct: 634 VPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMK 693

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E+ +  N   +++L++  CK      A  L   M+    +P+++ +  L+ GL+ +G   
Sbjct: 694 EENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQAD 753

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR--ISNALNFFLEKTDKTDGGYCSPNHV 474
               +++     +          +I G  + G   + + +   LE+        C P+  
Sbjct: 754 RAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMK------CKPSDE 807

Query: 475 LYAAIIQAL 483
            YA + + L
Sbjct: 808 TYAMLTEEL 816



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 154/325 (47%), Gaps = 11/325 (3%)

Query: 245 NFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
             F HM +     P    YN LI   C+  +L  A    S M +    PD FT+N LI G
Sbjct: 114 RLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C   QLE A  L  KM   G   + V+Y +LI+G+C+ G +++AL +  +MT    +P+
Sbjct: 174 YCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPD 229

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           + T ++L+ G C AG  +  + +  +M      P    + AL+D   ++   +E  ++  
Sbjct: 230 MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILN 289

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM ++ + P V T + +++   + GR+S A+  F  ++ +  G  C PN   Y AI+Q  
Sbjct: 290 EMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF--ESMRFKG--CEPNVWTYNAIVQGF 345

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G++ KA  L   MR   + PD  TY  ++RG      +     LL  M   G+  D 
Sbjct: 346 CNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQ 405

Query: 544 VINQVMVRGYQENGDLKSAFRCSEF 568
               V++    + G +  A  CS F
Sbjct: 406 YTYNVLIDALCKTGKVDEA--CSLF 428


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 277/568 (48%), Gaps = 52/568 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V+ + +  +   G ++EA+ V+ +++     P+I + NA++N L++ G F+   + Y  M
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DV T+ + I   C     + AL L + M  +G E   V+Y  +I G   EN  
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VEA  +F  M   G+ P++ T+N LM   CK   +    +  +++L + + PN+ TF + 
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 231 MDGLCKVGELRAAG-------NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + GLC+ G L  A        N+   M   G+ P+ F YN +I G+ K G + +A  +  
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           + +     PD FTY  LI G+C  G ++ A  L ++   +G+  ++V YN+LI G  ++G
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + KAL + + M+++G+ P++ T++ +I+G CK G +  A  L    + K  +PD+  F 
Sbjct: 378 LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFN 437

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDG  K   M   + +   M    +TP V T +S+++GL K  +  + +  F    +K
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK 497

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA-- 521
                C PN + Y  +I++LC   ++ +A  L  ++R+  L PD  ++ T++ G      
Sbjct: 498 G----CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGD 553

Query: 522 --------KRM-----------------------LDVMM---LLADMIKMGIVPDAVINQ 547
                   +RM                       LD+ M   L  +M   G  PD+   +
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIG 575
           VM+ G+ + G++ S +     LKE  IG
Sbjct: 614 VMIDGFCKVGNVNSGY--DFLLKEIEIG 639



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 257/508 (50%), Gaps = 15/508 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + N  V+ T+I  F E  +  EA  ++ K   + + P I   N L++ L KKG      +
Sbjct: 178 ELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEK 237

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQG-------DVMKALNLFDEMIDKGIEPTVVIYT 158
              +++  G+  ++ T+ + I   C +G        V++A N   +M++KG+EP    Y 
Sbjct: 238 LLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYN 297

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +I+G     K+ +A  + +  +  G VP+ +TY +L+ G C+  D++ AL  + E L  
Sbjct: 298 TIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK 357

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L+P++V +  L+ GL + G +  A      M+K G+ P+I+ YN +I+G CK G + +A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            +L +        PD+FT+N LI G C   +++ A G+L  M+  G+  +V+TYNS+++G
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK    E  +     + EKG  PN++T++ LI+  CKA  +  A+ L  E+  + L+PD
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFF 457
            V F  +I G   +G++ E  +L++ M +  +I  +V T + +I+   +   +  A   F
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  DK     C P+   Y  +I   C  G +                P   T+  ++  
Sbjct: 598 HEMGDKG----CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINC 653

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           L    R+ + + ++  M++ G+VP+AV+
Sbjct: 654 LCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 237/492 (48%), Gaps = 19/492 (3%)

Query: 88  NALLNGLI--------KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           N+LL G+         +KGK     + +E M        + +Y  +++     G   +A 
Sbjct: 72  NSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAH 131

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            ++  M  +GI P V  +TI I   C   + + A  +  +M   G   N   Y  ++ G+
Sbjct: 132 KVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGF 191

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            +      A E +++ML   + P++ TF  LM  LCK G L+        + K GV PN+
Sbjct: 192 YEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKF-------EISPDVFTYNILIKGLCGVGQLEG 312
           F +N  I G C+ G L  A S   E E +        + PD FTYN +I G   VG+++ 
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +L+    +G + +  TY SLI G C++GD++ AL++  +   KG++P++V +++LI 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  + G +  A+ L  +M  + + PD+  +  +I+GL K G + +   L    +     P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +FT ++LI G  K  ++ NA+       D       +P+ + Y +I+  LC   +    
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGIL----DSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            + F  +      P+  TY  ++  L +A+++ + + LL ++   G++PD V    ++ G
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547

Query: 553 YQENGDLKSAFR 564
           +  NGDL  A++
Sbjct: 548 FCNNGDLDEAYQ 559



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 26/175 (14%)

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV-------------SSLIHGLF----- 445
           ++ + + K+   K T   YK M+E       F               +SL+ G++     
Sbjct: 25  SIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMR 84

Query: 446 ---KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
              + G++  A++ F    ++ D   C P+   Y AI+  L   G   +A K++  M+ +
Sbjct: 85  NYGRKGKVQEAVDVF----ERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHE 140

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG-YQEN 556
            + PD CT+T  ++   R KR L  + LL +M   G   +AV+   ++ G Y+EN
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEEN 195


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 168/538 (31%), Positives = 260/538 (48%), Gaps = 26/538 (4%)

Query: 37  SVFNALNSLE-IPKFNP--SVFS-TLIIAF-SEMGHIEEALWVYRKIE----VLPAIQAC 87
           S+  ALN    + K NP  SV   TL++ F  +M H   A+ + +++     + P     
Sbjct: 55  SIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFIL 114

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N ++N L         +     M+  GL   VVT+ +LI+  C +GDV +A+ L D +  
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEK 174

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G    V  Y +LI+GLC   K  EA    R M E    PN+  Y+ +MDG CK   V+ 
Sbjct: 175 TGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSE 234

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    EM    ++PN+VT+  L+ GLC  G  + AG+    M K GV P++   N L+D
Sbjct: 235 ALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CK G + +A S+   M      PDVFTYN LI   C   Q++ A  + + M   G L 
Sbjct: 295 VLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLP 354

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++V Y SLI G+CK  ++ KA+ +  +M + G  P+VVT+++LI G C+ G   AA  L+
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M     VP++     ++DGL K   + E L L+  M ++ +  ++   S ++ G+   
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474

Query: 448 GRISNALNFFLEKTDKTDGGYCSP------NHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           G+++ AL  F           C P      N   Y  +I      G + KA  L S+M  
Sbjct: 475 GKLNTALELF----------SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 524

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN-GD 558
           +   PD+CTY   ++GL+  + +   +  L  M   G   DA   ++++     N GD
Sbjct: 525 NGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGD 582



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 239/471 (50%), Gaps = 8/471 (1%)

Query: 96  KKGKFDSVWE---FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIE 151
           K GK  S+ E   F+  M     +  V+ + +L+           A++L  EM    GI+
Sbjct: 49  KSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIK 108

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P   I  ++I+ LC+   +    S+  +M + G+ P++ T+  L++G C   DV RA+E 
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              +     + +V T+GVL++GLCK+G+   A  +   M +    PN+ VY+ ++DG CK
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA+ LC EM    I P++ TY  LI+GLC  G+ + A  LL +M K G++ ++ +
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            N L+D  CKEG + +A SV   M   G  P+V T++SLID  C    +D A  ++  MV
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +PD+V +T+LI G  K  N+ + + L  EM++   TP V T ++LI G  + GR  
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   FL            PN    A I+  LC    + +A  LF  M   NL  +   Y
Sbjct: 409 AAKELFLNMHKYGQ----VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + +L G+  A ++   + L + +   G+  +     +M+ G+ + G L  A
Sbjct: 465 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKA 515



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 194/407 (47%), Gaps = 4/407 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +  LI    +MG   EA+   RK+E     P +   + +++GL K G          EM 
Sbjct: 184 YGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS 243

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  ++VTY  LI   C  G   +A +L DEM+  G+ P +    IL+  LC E K++
Sbjct: 244 GKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIM 303

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A+S+   M   G VP+++TYN+L+D YC    ++ A   +  M+     P++V +  L+
Sbjct: 304 QAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI 363

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G CK+  +  A +    M K G  P++  +  LI G C+ G    A  L   M K+   
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ T  I++ GLC    L  A  L   M K  +  N+V Y+ ++DG C  G +  AL +
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S +  KG++ NV  ++ +I+G  K G +D A  L + M     +PD   +   + GL  
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVA 543

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +  +++ Y  M+  K      T + +I       +  N L  FL
Sbjct: 544 EREIARSIK-YLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL--QPNVVTFGV 229
           EA + F +M +   +P++  +  L+    K+     A+    EM H +L  +P+     V
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEM-HSSLGIKPDTFILNV 116

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++ LC +  +    +    M K G+ P++  +  LI+G C  G++  A+ L   +EK  
Sbjct: 117 VINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG 176

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              DV TY +LI GLC +G+   A G L+KM +     NVV Y++++DG CK+G + +AL
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 236

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +C +M+ KG++PN+VT++ LI G C  G    A  L  EM+   ++PD+     L+D L
Sbjct: 237 GLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVL 296

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K+G + +   +   M+     P VFT +SLI       ++  A   F     +     C
Sbjct: 297 CKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG----C 352

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y ++I   C    I KA  L  +M      PD  T+TT++ G  +  R L    
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           L  +M K G VP+     +++ G  ++  L  A      +++S +
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL 457



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 8/247 (3%)

Query: 300 LIKGLCGVGQLEG---AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM- 355
            ++  C  G+L+    A      M K   L +V+ +  L+    K      A+S+  +M 
Sbjct: 43  FMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMH 102

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           +  G++P+    + +I+  C    +     +   M+   L P VV FT LI+GL   G++
Sbjct: 103 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDV 162

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              + L   + +      V T   LI+GL K G+ S A+ +  +  ++      +PN V+
Sbjct: 163 GRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERN----WNPNVVV 218

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y+ ++  LC DG + +A  L  +M    ++P+  TYT +++GL    R  +   LL +M+
Sbjct: 219 YSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMM 278

Query: 536 KMGIVPD 542
           KMG++PD
Sbjct: 279 KMGVMPD 285


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 216/389 (55%), Gaps = 8/389 (2%)

Query: 32  HHVCYS--VFNALNSL-EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAI 84
            H+C +     AL  L ++P  N   ++T+I  F   G ++  + + R++     + P  
Sbjct: 124 RHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDK 183

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFD 143
                +++G  K GK +   + ++EM+  G V  + V Y  LI   C QG++  AL    
Sbjct: 184 YTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRG 243

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+D+G+  TV  Y + +H L  E +  EA ++   M E G+ P+ +TYN L++GYCK  
Sbjct: 244 EMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEG 303

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
              +A++ +  M+   ++  VVT+  L+  L   G ++     F    + G+ P++F+YN
Sbjct: 304 KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYN 363

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI+ HC  G++  A  +  EMEK  I+PD  TYN L++GLC +G+L+ A GL+++M K 
Sbjct: 364 ALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           GI  ++V+YN+LI GY  +GD++ A+ V  +M  KG  P ++T++++I G C  G    A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDA 483

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             L  EMV   + PD   + +LI+GL+ +
Sbjct: 484 EDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 227/470 (48%), Gaps = 11/470 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            PS+   L+ A         +L +Y +++ L ++    A L+ L+        +  + ++
Sbjct: 49  TPSLPHLLLTASVAGRPHTTSLSLYSRLKSL-SLPIPTASLHPLLSSLPPAPAFVLFADI 107

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               L     T+ +++   C  G  ++AL L  +M      P  V Y  +I G C   ++
Sbjct: 108 FRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRV 163

Query: 171 VEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFG 228
                + R MRE  G+ P+ YTY  ++ G+CKV  V  A + + EML    ++PN V + 
Sbjct: 164 QAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYN 223

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+ G C  G L  A  +   M   GV   +  YN  +      G   EA +L  EM + 
Sbjct: 224 ALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK 283

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            ++PD FTYNILI G C  G+ + A  + + M  +GI A VVTY SLI     +G +++ 
Sbjct: 284 GLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET 343

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + +    +G+ P++  +++LI+  C  G++D A  +  EM  K + PD V +  L+ G
Sbjct: 344 DRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRG 403

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L   G + E   L +EM +  I P + + ++LI G    G I +A+       D+  G  
Sbjct: 404 LCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV----RDEMMGKG 459

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            +P  + Y A+I+ LC +GQ   A  L  +M  + + PD+ TY +++ GL
Sbjct: 460 FNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 223/473 (47%), Gaps = 28/473 (5%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTL--------IIAFSEMGHIEEALWVYRKIEVL 81
           +PH    S+++ L SL +P    S+   L         + F+++  +   L         
Sbjct: 64  RPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVLFADIFRLRLPL--------- 114

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            +    N +L  L   GK     E   +M       + VTY  +I   C +G V   + +
Sbjct: 115 -STTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEI 169

Query: 142 FDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGY 199
             EM ++G I P    Y  +I G C   K+ +A  +F  M  E  V PN   YNAL+ GY
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C   ++  AL +  EM+   +   V T+ + +  L   G    A      M + G+ P+ 
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDA 289

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN LI+G+CK G   +AM +   M    I   V TY  LI  L   G ++  + L   
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
             + GI  ++  YN+LI+ +C  GDM++A  +  +M +K + P+ VT+++L+ G C  G 
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A GL  EM  + + PD+V +  LI G S  G++K+ +++  EM+     P++ T ++
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNA 469

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +I GL  NG+  +A +   E      G   +P+   Y ++I+ L  + + L A
Sbjct: 470 MIKGLCLNGQGGDAEDLVKEMV----GNGITPDDSTYISLIEGLTTEDERLAA 518



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 10/362 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + ++    L  +  TF +++  LC  G+   A      M      PN   YN +I 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 268 GHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-I 325
           G C  G +   + +  EM E+  I+PD +TY  +I G C VG++E A  +  +M  EG +
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V YN+LI GYC +G++E AL    +M ++GV   V T++  +      G    A  
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EM  K L PD   +  LI+G  K+G  K+ +++++ M+   I  +V T +SLIH L 
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G +      F +   +       P+  +Y A+I + C  G + +A ++  +M    + 
Sbjct: 336 MKGMVQETDRLFNDAVRRG----IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD+ TY T++RGL    R+ +   L+ +M K GI PD V    ++ GY   GD+K A + 
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 566 SE 567
            +
Sbjct: 452 RD 453



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 192/407 (47%), Gaps = 10/407 (2%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++ I T  +H L +      A  +F  +    +  +  T+N ++   C      RALE  
Sbjct: 80  SLPIPTASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELL 139

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCK 271
            +M      PN VT+  ++ G C  G ++A       M  + G+ P+ + Y  +I G CK
Sbjct: 140 RQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCK 195

Query: 272 AGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            G + +A  +  EM  + ++ P+   YN LI G C  G LE A     +M   G+   V 
Sbjct: 196 VGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVA 255

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN  +     EG   +A ++  +M EKG+ P+  T++ LI+G CK G    AM ++  M
Sbjct: 256 TYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVM 315

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V K +   VV +T+LI  LS  G ++ET RL+ + +   I P +F  ++LI+     G +
Sbjct: 316 VGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDM 375

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E   K      +P+ V Y  +++ LC  G++ +A  L  +M    ++PD  +
Sbjct: 376 DRAFEIMGEMEKKR----ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVS 431

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           Y T++ G      + D + +  +M+  G  P  +    M++G   NG
Sbjct: 432 YNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNG 478



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 153/299 (51%), Gaps = 10/299 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  L +++ +  +     T+NI+++ LC  G+   A  LL++M       N VTYN++I 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 338 GYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           G+C  G ++  + +  +M E+G + P+  T++++I G CK G ++ A  ++ EM+ +  V
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 397 -PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V++ ALI G    GN++  LR   EM++  ++ +V T +  +H LF  GR + A  
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              E  +K      +P+   Y  +I   C +G+  KA K+F  M    +R    TYT+++
Sbjct: 276 LVEEMGEKG----LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             L     + +   L  D ++ GI PD  +   ++  +   GD+  AF     +++ RI
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRI 390



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 3/195 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI A S  G ++E   ++    +  + P +   NAL+N     G  D  +E   EM
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  D VTY  L+   C  G + +A  L +EM  +GI+P +V Y  LI G   +  +
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDI 445

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   M   G  P L TYNA++ G C       A +   EM+ + + P+  T+  L
Sbjct: 446 KDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISL 505

Query: 231 MDGLCKVGELRAAGN 245
           ++GL    E  AAG+
Sbjct: 506 IEGLTTEDERLAAGD 520


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 265/599 (44%), Gaps = 46/599 (7%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           +F+ +         R L   +   LLK+++       VF  +     P  +   ++T+I 
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA-REVFGQMEKCGFPP-DAIAYNTMID 268

Query: 61  AFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
             ++ GH +EAL V   +     +P       L+N L K G  +   E +  M   G   
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           + V Y  LI      G + +A +LFDEM++ G  P V+ +T++I GLC      +A   F
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G  PN+ TY  ++ G  K+  V  A      M+ H   P+ VT+  L+DG CK+
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC--------------------------- 270
           G L  A      + K    PN+ +Y+ L++G C                           
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508

Query: 271 ---------KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV--GQLEGAEGLLQK 319
                    K G L EA  +   M      PD  TYNILI GLC     ++E A  LL  
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + K G L + VTY  L  G CK G++++A+ +  + + +G   +VV +++L  G C  G 
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A+ L+ EMV +   PD   +  +I+GL K   +++  + + EM+     P+V T ++
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+  L   G +  A + F     +   G    + ++Y A+I   C   ++  A KLF DM
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLAR---GELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            S    P   T  ++  GL+R+ +      LL +M   G  P A     ++ G +++ +
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 243/519 (46%), Gaps = 15/519 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACN-ALLNGLIKKGKFDSVWEFYEE 109
            F  L+    + G  E+A  V+ ++  +   P  +A + A++  L+K  +     E + +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M  CG   D + Y  +ID     G   +AL + D M+ K   PT V Y IL++ LC    
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  AE +FR M   G  PN   Y +L+ G+ K   +  A   + EM+    +P+V+T  V
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DGLCK G    A   F  M + G  PN+  Y  +I G  K G +  A  +   M    
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PD  TY  L+ G C +G+L+ A  LL ++ K     N+  Y+SL++G C  G +EK L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 350 SVCSQMTEKGVE---PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
               + ++   E   P +    S+I G CK G +D A  ++  MV +   PD   +  LI
Sbjct: 491 DDLFEQSKAAAETLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 407 DGL--SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +GL  S++  ++    L  ++ +    P   T + L  GL K G +  A+    E + + 
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR- 607

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G+ + + V Y A+   LCY GQ+ +A  LF +M      PD   Y  ++ GL++ K++
Sbjct: 608 --GW-NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            D      +MI  G  P       +V+     G++  AF
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 230/490 (46%), Gaps = 8/490 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K  + P   + N L+    +  + D     +E M       D+ T+ +L+DC C  G   
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206

Query: 137 KALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           KA  +F EM+  G + P   ++T ++  L    ++ EA  +F  M +CG  P+   YN +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG  K      AL+    ML     P  VT+G+L++ LCK G L  A   F  MA  G 
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI G  K+G + EA SL  EM +    PDV T+ ++I GLC  G  E A  
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             ++M + G   NVVTY ++I G  K G +  A  +   M   G  P+ VT+  L+DG C
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL-RLYKEMLEAKITPSV 434
           K G +D A  L  E+   S  P++ ++++L++GL   G++++TL  L+++   A  T   
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDP 506

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC--YDGQILKA 492
               S+I GL K GR+  A   F     +     C P+   Y  +I  LC   + ++ +A
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEG----CKPDATTYNILINGLCRSRENRVERA 562

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  D+      PD  TYT +  GL +   +   + +L +    G   D V    +  G
Sbjct: 563 FALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622

Query: 553 YQENGDLKSA 562
               G +  A
Sbjct: 623 LCYQGQVDRA 632



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 234/515 (45%), Gaps = 45/515 (8%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A+L  L   G   S + +  E    G   DV TY  L++    + +  +   + +EM+  
Sbjct: 91  AVLRSLKVTGTAISFFRWAGEQA--GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI P    + ILI       +  +A + F  M+     P+L+T+  L+D  CK     +A
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 209 LEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            E +HEM+    + P+      ++  L K   ++ A   F  M K G  P+   YN +ID
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  KAG+  EA+ +   M      P   TY IL+  LC  G LE AE L + M   G   
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N V Y SLI G+ K G M++A S+  +M E G  P+V+T + +IDG CK+GN + A   +
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM+     P+VV +T +I GLSK G +    R+ K M+     P   T   L+ G  K 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK---------------- 491
           GR+  A        D+ D    SPN  LY++++  LC  G + K                
Sbjct: 449 GRLDEAAQLL----DELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504

Query: 492 --------------------ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK--RMLDVMM 529
                               A ++F  M S+  +PD  TY  ++ GL R++  R+     
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LL D+ K+G +PDAV    +  G  + G++  A +
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 5/283 (1%)

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E+     DVFTYN L+  L           + ++M K GI  N  ++N LI  + +    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTA 404
           + A++    M  K  +P++ TF  L+D  CKAG  + A  ++ EM+    VP D  + TA
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++  L K   +KE   ++ +M +    P     +++I GL K G    AL       D  
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL----DNM 286

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C P  V Y  ++ +LC  G + +A +LF  M +   RP++  YT+++ G  ++ RM
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            +   L  +M++ G  PD + + VM+ G  ++G+ + A +  E
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 263/557 (47%), Gaps = 45/557 (8%)

Query: 37   SVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNAL 90
            +V + L S+ +    P+      L+ A+++ G + +A  +  ++      LP +  CN L
Sbjct: 890  AVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRL 949

Query: 91   LNGLIKKGKFDSVWEFYEEMV-----------------LC------------------GL 115
            L  L+++ ++D   + Y+EM+                 LC                  G 
Sbjct: 950  LKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGC 1009

Query: 116  VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
            +  VV Y VLID  C +GD+ + L L  EM   G  PT+V Y  LI+ L  +  + +  S
Sbjct: 1010 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGS 1069

Query: 176  MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            +F  MR+ G  PN+  YN+++D  C      +A+    +M      P+++TF  L+ GLC
Sbjct: 1070 LFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1129

Query: 236  KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
              G +R A +F     +  + PN   Y  LI G C  G L  A  L  EM     +PDV 
Sbjct: 1130 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1189

Query: 296  TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            T+  LI GL   G++  A  + +KM +  +  +V  YN LI G CK+  +  A ++  +M
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1249

Query: 356  TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             EK V+P+   +++LIDG  ++ N+  A  ++  M  K + PD+V   A+I G  + G M
Sbjct: 1250 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMM 1309

Query: 416  KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
             E +     M +    P  FT +++I G  K G ++ AL +  +   +     C PN V 
Sbjct: 1310 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK----CKPNVVT 1365

Query: 476  YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
            Y+++I   C  G    A  LF++M+++ L P+  TYT ++  L +  ++L   +    M+
Sbjct: 1366 YSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1425

Query: 536  KMGIVPDAVINQVMVRG 552
                 P+ V    +V G
Sbjct: 1426 LNHCSPNDVTLHYLVNG 1442



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 222/438 (50%), Gaps = 4/438 (0%)

Query: 81   LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            +P +   N L++G  ++G          EM   G +  +VTYG LI+    +GD+ K  +
Sbjct: 1010 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGS 1069

Query: 141  LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            LF EM  +G  P V IY  +I  LCN     +A  + + M   G  P++ T+N L+ G C
Sbjct: 1070 LFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1129

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                V +A  F  E +   L PN +++  L+ G C  GEL  A +  V M   G  P++ 
Sbjct: 1130 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1189

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             +  LI G   AG + EA+ +  +M + ++ PDV  YN+LI GLC    L  A+ +L++M
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1249

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             ++ +  +   Y +LIDG+ +  ++  A  +   M  KGV P++V+ +++I G C+ G +
Sbjct: 1250 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMM 1309

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
              A+   + M     +PD   +T +I G +K GN+   LR   +M++ K  P+V T SSL
Sbjct: 1310 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1369

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            I+G  K G   +A   F     +      SPN V Y  +I +L    ++L+A   F  M 
Sbjct: 1370 INGYCKTGDTDSAEGLFANMQAEA----LSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1425

Query: 501  SDNLRPDNCTYTTMLRGL 518
             ++  P++ T   ++ GL
Sbjct: 1426 LNHCSPNDVTLHYLVNGL 1443



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 241/508 (47%), Gaps = 16/508 (3%)

Query: 42   LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIK 96
            L  +E   F P++  + +LI    + G +E+   ++   RK    P +Q  N++++ L  
Sbjct: 1036 LGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCN 1095

Query: 97   KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
                       ++M   G   D++T+  LI   C +G V KA +   E I + + P  + 
Sbjct: 1096 CRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 1155

Query: 157  YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
            YT LIHG C   +++ A  +   M   G  P++ T+ AL+ G      V+ AL    +M 
Sbjct: 1156 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1215

Query: 217  HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               + P+V  + VL+ GLCK   L AA N    M +  V P+ FVY  LIDG  ++ NL 
Sbjct: 1216 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1275

Query: 277  EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            +A  +   ME   + PD+ + N +IKG C  G +  A   +  M K G + +  TY ++I
Sbjct: 1276 DARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1335

Query: 337  DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             GY K+G++  AL     M ++  +PNVVT+SSLI+G CK G+ D+A GL+  M  ++L 
Sbjct: 1336 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALS 1395

Query: 397  PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK---------- 446
            P+VV +T LI  L K   +      ++ ML    +P+  T+  L++GL            
Sbjct: 1396 PNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSIC 1455

Query: 447  -NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             N    +  +  L    K       P +  Y AII +LC    + +A    + M      
Sbjct: 1456 CNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYV 1515

Query: 506  PDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
            P+  T+ ++L G     + ++   +L +
Sbjct: 1516 PNPITFLSLLYGFCSVGKSVNWRTILPN 1543



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 213/466 (45%), Gaps = 5/466 (1%)

Query: 100  FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYT 158
            FD+V +  + M L G        G L+      G + KA  + + + ++ G  P V    
Sbjct: 888  FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947

Query: 159  ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
             L+  L  + +  +A  ++  M       + Y+   L+ G C    V   L+        
Sbjct: 948  RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007

Query: 219  NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
               P+VV + VL+DG C+ G++         M   G  P +  Y  LI+   K G+L + 
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             SL  EM K   SP+V  YN +I  LC       A  +L++M+  G   +++T+N+LI G
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127

Query: 339  YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             C EG + KA     +   + + PN ++++ LI G C  G +  A  L  EM+ +   PD
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187

Query: 399  VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            VV F ALI GL   G + E L + ++M E ++ P V   + LI GL K   +  A N   
Sbjct: 1188 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1247

Query: 459  EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            E  +K       P+  +YA +I        +  A K+F  M    + PD  +   M++G 
Sbjct: 1248 EMLEKN----VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGY 1303

Query: 519  LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +   M + ++ +++M K+G +PD      ++ GY + G+L  A R
Sbjct: 1304 CQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1349



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 199/426 (46%), Gaps = 9/426 (2%)

Query: 149  GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNR 207
            G  PT      L+    +   + +A  M   +RE  G +P +   N L+    +    + 
Sbjct: 902  GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961

Query: 208  ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV--FPNIFVYNCL 265
            A + Y EML  +   +  +  VL+ GLC   E R      +  A++G    P++  YN L
Sbjct: 962  ARKLYDEMLGKDSGADNYSTCVLVRGLCL--ERRVEEGLKLIEARWGAGCIPHVVFYNVL 1019

Query: 266  IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
            IDG+C+ G++   + L  EME     P + TY  LI  L   G LE    L  +M K G 
Sbjct: 1020 IDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1079

Query: 326  LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              NV  YNS+ID  C      +A+ +  QM   G +P+++TF++LI G C  G++  A  
Sbjct: 1080 SPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 1139

Query: 386  LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
               E + + L P+ + +T LI G    G +     L  EM+    TP V T  +LIHGL 
Sbjct: 1140 FLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV 1199

Query: 446  KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
              G++S AL    + T++       P+  +Y  +I  LC    +  A  +  +M   N++
Sbjct: 1200 VAGKVSEALIVREKMTERQ----VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1255

Query: 506  PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
            PD   Y T++ G +R++ + D   +   M   G+ PD V    M++GY + G +  A  C
Sbjct: 1256 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILC 1315

Query: 566  SEFLKE 571
               +++
Sbjct: 1316 MSNMRK 1321



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 139/323 (43%), Gaps = 27/323 (8%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V++TLI  F    ++ +A  ++  +E   V P I +CNA++ G  + G           M
Sbjct: 1260 VYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1319

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               G + D  TY  +I     QG++  AL    +MI +  +P VV Y+ LI+G C     
Sbjct: 1320 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 1379

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              AE +F +M+   + PN+ TY  L+    K   V RA  ++  ML ++  PN VT   L
Sbjct: 1380 DSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 1439

Query: 231  MDGL------------CKVGELRAAGNFFVHMAKFGVF----PNIFVYNCLIDGHCKAGN 274
            ++GL            C   E+       V   K  VF    P    YN +I   C+   
Sbjct: 1440 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKL-VFDIGDPRNSAYNAIIFSLCRHNM 1498

Query: 275  LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            L EA+   + M K    P+  T+  L+ G C VG+      +L   +++     +  Y  
Sbjct: 1499 LREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKF 1558

Query: 335  LIDGYCKEGDMEKALSVCSQMTE 357
            L D Y  E       SVC +++ 
Sbjct: 1559 LFDQYATE-------SVCCEVSR 1574


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 259/525 (49%), Gaps = 10/525 (1%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           + F  L  L      P+V  ++ L+ A  + G +EEA  +  ++    V P+I     L+
Sbjct: 229 AAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILI 288

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +GL +  +F  V    +EM   G+  + V Y  +I   C +G   +AL LFDEM+ KGI+
Sbjct: 289 SGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIK 348

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK-VADVNRALE 210
            TVV Y ++   LC E +M  AE +   M   G++ +   +N+++  + +    ++  L 
Sbjct: 349 QTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLR 408

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EML   L+PN       +  LCK G+   A   +  +   G+  N+   N LI G C
Sbjct: 409 LIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLC 468

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           +  N+ EA  +   M    +  D  TYNI+I+G C   +++ A  L   M K G   ++ 
Sbjct: 469 QGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLF 528

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N  +  YC  G +E+ L +  QM  +G++P++VT+ ++IDG CKA ++  A    TE+
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   L P+ V++ ALI G  ++GN+ + + +   M    I P+  T +SL++ +   G +
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLV 648

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
                 F +   K          + Y  IIQ  C  G+I +A   F +M S  + P+  T
Sbjct: 649 EEVKAVFAQCIVKD----IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMT 704

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           YTT++    ++    +   L  +M+ +GIVPD+V    ++ G+ E
Sbjct: 705 YTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 236/470 (50%), Gaps = 10/470 (2%)

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDC--CCGQGDVMKALNLFDEMID-KGIEPTV 154
           G      + + E+   G    + T  +L++   C GQ DV  A  +F EM D K + P V
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDV--ARKVFGEMRDGKTVAPDV 211

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             YT +I  LC   ++  A +M   +R  G+ P + TYN LMD  CK   V  A      
Sbjct: 212 HTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGR 271

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+   ++P++VTFG+L+ GL +  +    G     M  FG+ PN  +YN +I  HC+ G+
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             EA+ L  EM    I   V TYN++ K LC  G++E AE +L +M   G++ +   +NS
Sbjct: 332 CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNS 391

Query: 335 LIDGYCK-EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++  + +  G ++  L +  +M  + ++PN    ++ I   CK+G  + A  ++ +++ K
Sbjct: 392 VVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  +V    ALI GL +  NMKE  ++ K M+ + +     T + +I G  K  ++  A
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           +     + D    G+  P+   +   +   C  G++ +   L   M+S+ L+PD  TY T
Sbjct: 512 IQL---RDDMIKRGF-KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           ++ G  +AK M      L +++K G+ P+AVI   ++ GY  NG++  A 
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 261/556 (46%), Gaps = 46/556 (8%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVW 104
           +PS+   S L+ A    G ++ A  V+ ++     V P +    A++  L + G+ D+ +
Sbjct: 172 SPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAF 231

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               E+   G+   VVTY VL+D  C  G V +A  L   M++  + P++V + ILI GL
Sbjct: 232 AMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGL 291

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               +  E  ++ + M+  G+ PN   YN ++  +C+    + AL+ + EM+   ++  V
Sbjct: 292 ARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTV 351

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH--------------- 269
           VT+ ++   LCK GE+  A      M   G+  +  ++N ++  H               
Sbjct: 352 VTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIR 411

Query: 270 ---------------------CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
                                CK+G   EA  +  ++    +  +V T N LI GLC   
Sbjct: 412 EMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGN 471

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            ++ A  +L+ M   G+  + +TYN +I G CK   M++A+ +   M ++G +P++ TF+
Sbjct: 472 NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFN 531

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
             +   C  G ++  + L  +M  + L PD+V +  +IDG  K  +M +      E+++ 
Sbjct: 532 IFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN 591

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P+    ++LI G  +NG IS+A+      T K +G    P  V Y +++  +C+ G 
Sbjct: 592 GLRPNAVIYNALIGGYGRNGNISDAIGIL--DTMKYNG--IQPTPVTYNSLMYWMCHAGL 647

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +   +F+     ++      YT +++G  +  ++ + +M   +M   GI P+ +    
Sbjct: 648 VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTT 707

Query: 549 MVRGYQENGDLKSAFR 564
           ++  Y ++G+ + A +
Sbjct: 708 LMFAYSKSGNKEEASK 723



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 226/472 (47%), Gaps = 8/472 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I      GH  EAL ++ ++    +   +   N +   L K+G+ +   +  
Sbjct: 315 NEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL 374

Query: 108 EEMVLCGLVADVVTYGVLIDCCC-GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +EM+L G++     +  ++     G G +   L L  EM+ + ++P   + T  I  LC 
Sbjct: 375 DEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCK 434

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  EA  ++  +   G+  N+ T NAL+ G C+  ++  A +    M++  ++ + +T
Sbjct: 435 SGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRIT 494

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++ G CK  ++  A      M K G  P++F +N  +  +C  G + E + L  +M+
Sbjct: 495 YNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMK 554

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+ TY  +I G C    +  A   L ++ K G+  N V YN+LI GY + G++ 
Sbjct: 555 SEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNIS 614

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A+ +   M   G++P  VT++SL+   C AG ++    ++ + ++K +   V+ +T +I
Sbjct: 615 DAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIII 674

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G + E +  +KEM    I P+  T ++L+    K+G    A   F    D+   
Sbjct: 675 QGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF----DEMVS 730

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               P+ V Y  +I   C    + K  +  ++M S  L+ D C+Y   + G+
Sbjct: 731 LGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 193/376 (51%), Gaps = 7/376 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA-----IQACNALLNGLIKKGKFDSV 103
           K N ++ +  I    + G  EEA  ++   +VL       +   NAL++GL +       
Sbjct: 419 KPNDALMTACIQELCKSGKHEEAAEIW--FQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            +  + MV  G+  D +TY ++I  CC    + +A+ L D+MI +G +P +  + I +H 
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT 536

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            CN  K+ E   +   M+  G+ P++ TY  ++DGYCK  D+++A E+  E++ + L+PN
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V +  L+ G  + G +  A      M   G+ P    YN L+   C AG + E  ++ +
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFA 656

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +    +I   V  Y I+I+G C +G+++ A    ++M+  GI  N +TY +L+  Y K G
Sbjct: 657 QCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSG 716

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           + E+A  +  +M   G+ P+ V++++LI G C+  ++D  +    EM  + L  D   + 
Sbjct: 717 NKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYN 776

Query: 404 ALIDGLSKDGNMKETL 419
           A +DG++     KE +
Sbjct: 777 AFVDGITTPWCQKEAV 792



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 128/269 (47%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N  L+     GK + +    ++M   GL  D+VTYG +ID  C   D+ KA   
Sbjct: 525 PDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEY 584

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             E++  G+ P  VIY  LI G      + +A  +  +M+  G+ P   TYN+LM   C 
Sbjct: 585 LTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCH 644

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V      + + +  +++  V+ + +++ G CK+G++  A  +F  M   G+ PN   
Sbjct: 645 AGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMT 704

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+  + K+GN  EA  L  EM    I PD  +YN LI G C V  L+       +M 
Sbjct: 705 YTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMS 764

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALS 350
            + +  +  +YN+ +DG       ++A+S
Sbjct: 765 SQVLKQDGCSYNAFVDGITTPWCQKEAVS 793



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR-SDNLRP 506
           G +S A + FLE + +      SP+    + +++AL   GQ+  A K+F +MR    + P
Sbjct: 154 GSLSRAADAFLELSARG----ASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAP 209

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  TYT M++ L RA  +     +LA++ + GI P  V   V++    ++G ++ AFR  
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269

Query: 567 EFLKESRIGSS 577
             + E R+  S
Sbjct: 270 GRMVEGRVRPS 280


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 253/512 (49%), Gaps = 10/512 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI    + G + +AL +   +      P +     LL  + K   F+      +EM
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   ++VTY V+I+  C +G V  A +L + +   G +P  V YT L+ GLC   + 
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            + E +F  M E   +PN  T++ L+  +C+   V RA++   +M  H    N     ++
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIV 323

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ +CK G +  A  F  +M  +G  P+   Y  ++ G C+A    +A  L  EM +   
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNC 383

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+  T+N  I  LC  G +E A  L+++M + G    VVTYN+L++G+C +G ++ AL 
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALE 443

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M  K   PN +T+++L+ G C A  +DAA  L  EM+ +   P+VV F  L++   
Sbjct: 444 LFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G + E + L ++M+E   TP++ T ++L  G+ K+    +AL        K      S
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG----VS 556

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ + +++II  L  + ++ +A ++F   +   +RP    Y  +L GL +   + + +  
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           LA M+  G +P+     +++ G    G LK A
Sbjct: 617 LAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 208/458 (45%), Gaps = 10/458 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV     LI   C +G    A  +       G    V  Y  L+ G C    +  A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +  SM    V P+ YTY  L+   C    V  AL    +ML    QPNVVT+ VL++ 
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           +CK      A      M   G  PNI  YN +I+G C+ G + +A  L + +  +   PD
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  L+KGLC   + +  E L  +M ++  + N VT++ LI  +C+ G +E+A+ V  
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QMTE     N    + +I+  CK G +D A      M      PD + +T ++ GL +  
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
              +   L KEM+     P+  T ++ I  L + G I  A+   +E+  +     C+   
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI-MLIEQMQEHG---CTVGV 422

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y A++   C  G I  A +LF   RS   +P+  TYTT+L GL  A+R+     L+A+
Sbjct: 423 VTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAE 479

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M+     P+ V   V+V  + + G L  A    E + E
Sbjct: 480 MLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 210/416 (50%), Gaps = 7/416 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   +   LL GL    ++D V E + EM+    + + VT+ +LI   C  G V +A+ +
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M +        +  I+I+ +C + ++ +A     +M   G  P+  +Y  ++ G C+
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               N A E   EM+ +N  PN VTF   +  LC+ G +  A      M + G    +  
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L++G C  G++  A+ L   M      P+  TY  L+ GLC   +L+ A  L+ +M 
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEML 481

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
                 NVVT+N L++ +C++G +++A+ +  QM E G  PN++T+++L DG  K  + +
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSE 541

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L   +V K + PDV+ F+++I  LSK+  ++E ++++    +  + P     + ++
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            GL K   I NA++F       ++G  C PN   Y  +I+ L  +G + +A  L S
Sbjct: 602 LGLCKRHEIDNAIDFLAYMV--SNG--CMPNESTYIILIEGLAREGLLKEAQDLLS 653



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 179/370 (48%), Gaps = 6/370 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  LI  F   G +E A+ V +++   E       CN ++N + K+G+ D  ++F 
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL 340

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G   D ++Y  ++   C       A  L  EM+     P  V +   I  LC +
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +   M+E G    + TYNAL++G+C    ++ ALE +  M     +PN +T+
Sbjct: 401 GLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITY 457

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC    L AA      M      PN+  +N L++  C+ G L EA+ L  +M +
Sbjct: 458 TTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +P++ TYN L  G+      E A  LL  +  +G+  +V+T++S+I    KE  +E+
Sbjct: 518 HGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEE 577

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +     + G+ P  + ++ ++ G CK   ID A+     MV    +P+   +  LI+
Sbjct: 578 AIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIE 637

Query: 408 GLSKDGNMKE 417
           GL+++G +KE
Sbjct: 638 GLAREGLLKE 647



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 8/281 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+T I    + G IE+A+ +  +++       +   NAL+NG   +G  DS  E +
Sbjct: 386 NEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF 445

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M       + +TY  L+   C    +  A  L  EM+ +   P VV + +L++  C +
Sbjct: 446 RSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQK 502

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  +   M E G  PNL TYN L DG  K      ALE  H ++   + P+V+TF
Sbjct: 503 GFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITF 562

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             ++  L K   +  A   F H+A+  G+ P   VYN ++ G CK   +  A+   + M 
Sbjct: 563 SSIIGILSKEDRVEEAIQMF-HLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMV 621

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
                P+  TY ILI+GL   G L+ A+ LL  +   G+++
Sbjct: 622 SNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 10/303 (3%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ-KMYKEGILANVVTYNSLI 336
           A +  +  E   ++P+  +  +  + L     L GA  L++    ++G   +V     LI
Sbjct: 25  AAAAATRPESPNVAPNPASARL--RRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLI 82

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              C+ G    A  V       G   +V  +++L+ G C+ G++DAA  L   M +    
Sbjct: 83  RNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV---A 139

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   +T LI  L   G + + L L  +ML     P+V T + L+  + KN     A+  
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D+     C+PN V Y  II  +C +G++  A  L + + S   +PD  +YTT+L+
Sbjct: 200 L----DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
           GL  +KR  DV  L A+M++   +P+ V   +++R +   G ++ A +  + + E    +
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315

Query: 577 SET 579
           + T
Sbjct: 316 NTT 318


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 260/548 (47%), Gaps = 46/548 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS   L+    +    +EAL + + +     +  P + +   ++NG  K+G  D  +
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             Y EM+  G++ +VVTY  +I   C    + KA+ +   M+  G+ P    Y  ++HG 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  +  EA    + M   GV P++ TYN+LMD  CK      A + +  M    L+P +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T+G L+ G    G L         M + G+ PN +V++ LI  + K G + +AM + S+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--------------------- 323
           M +  ++PD  TY  +I  LC  G++E A    ++M  E                     
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 324 --------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
                         GI  + + +NS+ID +CKEG + ++  +   M   GV+P+++T+S+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LIDG C AG +D A  L   MV   + PD V +  LI+G  K   M++ L L++EM  + 
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           ++P + T + ++ GLF+  R + A   ++  T+       S     Y  I+  LC +   
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST----YNIILHGLCKNNLT 635

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 550 VRGYQENG 557
                E G
Sbjct: 696 AENLIEQG 703



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  ++ TYG+L+  CC  G +         +I KG     + +T ++ G
Sbjct: 76  YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M + G +PN+++YN L+ G C                      
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195

Query: 201 ---------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                          K  D+++A   YHEML   + PNVVT+  ++  LCK   +  A  
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M K GV PN   YN ++ G+C +G   EA+    +M    + PDV TYN L+  LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            FS LI    K G +D AM ++++M  + L PD V +  +I  L K G +++ +R +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           ++ +++P     +SLIH L    +   A    LE  D+   G C  + + + +II + C 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR---GIC-LDTIFFNSIIDSHCK 491

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           +G+++++ KLF  M    ++PD  TY+T++ G   A +M +   LLA M+ +G+ PD V 
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 546 NQVMVRGY 553
              ++ GY
Sbjct: 552 YNTLINGY 559



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 261/551 (47%), Gaps = 10/551 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I A  +   +++A+ V     K  V+P  +  N++++G    G+      F 
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P +  Y  L+ G   +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +VE   +   M   G+ PN Y ++ L+  Y K   V++A+  + +M    L P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G ++  LCK G +  A  +F  M    + P   VYN LI   C      +A  L  EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I  D   +N +I   C  G++  +E L   M + G+  +++TY++LIDGYC  G M++
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  + + M   G++P+ VT+++LI+G CK   ++ A+ L+ EM    + PD++ +  ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL +         LY  + E+     + T + ++HGL KN     AL  F +    TD  
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF-QNLCLTD-- 649

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                   +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M   L+    + ++
Sbjct: 650 -LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L   M + G   ++ +   +VR   + GD+  A      + E        E  T   F
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF---SLEASTASLF 765

Query: 588 LGHLKPTVYKE 598
           L  L    Y+E
Sbjct: 766 LDLLSGGKYQE 776



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 179/365 (49%), Gaps = 52/365 (14%)

Query: 243 AGNFFVHMAKFGVFPNIFVYNCL---IDGHCKAGNLFEAMSLCSEMEKF---EISPDVFT 296
           A + F  + + G   +I+  NC    +  H  A     A+S  + M +    E++P++ T
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSPAA----AVSRYNRMARAGADEVTPNLCT 93

Query: 297 YNILIKGLCGVGQL------------------------------------EGAEGLLQKM 320
           Y IL+   C  G+L                                    +  + +L++M
Sbjct: 94  YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRM 153

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE--PNVVTFSSLIDGQCKAG 378
            + G + NV +YN L+ G C +   ++AL +   M + G +  P+VV+++++I+G  K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A G Y EM+ + ++P+VV ++++I  L K   M + + +   M++  + P+  T +
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++HG   +G+   A+ F   K   +DG    P+ V Y +++  LC +G+  +A K+F  
Sbjct: 274 SIVHGYCSSGQPKEAIGFL--KKMHSDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+P+  TY T+L+G      ++++  LL  M++ GI P+  +  +++  Y + G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 559 LKSAF 563
           +  A 
Sbjct: 390 VDQAM 394



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 10/285 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V PN+ T+
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             L+   C AG +D        ++ K  + D + FT ++ GL  D    + + +  + M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    P+VF+ + L+ GL  + R   AL       D  DGG C P+ V Y  +I     +
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKE 212

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + KA   + +M    + P+  TY++++  L +A+ M   M +L  M+K G++P+    
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             +V GY  +G  K A     FLK+      E +  T  S + +L
Sbjct: 273 NSIVHGYCSSGQPKEAI---GFLKKMHSDGVEPDVVTYNSLMDYL 314


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 246/511 (48%), Gaps = 42/511 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P ++ CN +L  L    ++D +   +EEM+  G+   +VTY  L+D    +G   K  
Sbjct: 165 VAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVA 224

Query: 140 NLFDEMIDKGIE--PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L  EM  +G    P  V Y ++I GL  +  + EA  +   MR      + +TYN L+ 
Sbjct: 225 MLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS-FTYNPLIT 283

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G      V +  +   EM +  + P VVT+  ++ GL + G + AA   F  M   G+ P
Sbjct: 284 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLP 343

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN L++G+CKAGNL EA+ L  ++ +  ++P V TYNI I G C +G LE A  L 
Sbjct: 344 DVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILK 403

Query: 318 QKMYKEGILANVVTYNSLIDG--------------------------------YCKE--- 342
           ++M ++G L NV TY  L+ G                                 C E   
Sbjct: 404 EEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 463

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           GD+ +AL +   +  +G+  + VT++ LI G CK GN+  A  L  +MV   L PD + +
Sbjct: 464 GDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 523

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LI    + G ++E  +++  M+   + PS  T + +IH   + G + +A  +F +  +
Sbjct: 524 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 583

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +       PN + Y  +I ALC  G+   AS  F +M    L  +  TYT ++ G  +  
Sbjct: 584 EG----VEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 639

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
              D M    +M + GI PD + ++ +V+G+
Sbjct: 640 NWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 216/441 (48%), Gaps = 8/441 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC--NALLNGLIKKGKFDSVWEFYE 108
           N   ++ +I   +  G +EEA  +   + +     +   N L+ GL+ +G    V++   
Sbjct: 240 NDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQL 299

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G++  VVTY  +I      G V  A   F EM   G+ P V+ Y  L++G C   
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 359

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + EA  +F  +R  G+ P + TYN  +DGYC++ D+  A     EM      PNV T+ 
Sbjct: 360 NLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 419

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +LM G   V  L  A  FF  M   G+ P+ F YN  I      G++  A+ L   +   
Sbjct: 420 ILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLE 479

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            IS D  TYNILI GLC  G L+ A+ L  KM   G+  + +TY  LI  +C+ G + +A
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREA 539

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + + M   G+ P+ VTF+ +I   C+ GN+ +A G + +M+ + + P+ + +  LI  
Sbjct: 540 RKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 599

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L + G  +     + EMLE  +  + +T + LI G  K G   +A+ F+ E         
Sbjct: 600 LCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG---- 655

Query: 469 CSPNHVLYAAIIQALCYDGQI 489
             P+++ + A+++   +DG +
Sbjct: 656 IHPDYLTHKALVKG--FDGHV 674



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 213/432 (49%), Gaps = 17/432 (3%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+ F EM   G+ P V     ++  L +  +  +  ++   M + G+ P++ TYN L+D 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 199 YCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           + K    ++      EM        PN VT+ V++ GL + G+L  A      M +    
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 272

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            + F YN LI G    G + +   L  EME   I P V TYN +I GL   G +E A+  
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M   G+L +V+TYNSL++GYCK G++++AL +   +   G+ P V+T++  IDG C+
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+++ A  L  EM  +  +P+V  +T L+ G     ++      + EML   + P  F 
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++ I      G I+ AL   L +    +G   S + V Y  +I  LC  G +  A +L 
Sbjct: 453 YNTRICAELILGDIARALE--LREVLMLEG--ISSDTVTYNILIHGLCKTGNLKDAKELQ 508

Query: 497 SDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             M S+ L+PD  TYT ++     RGLLR  R      +  +MI  G++P AV   V++ 
Sbjct: 509 MKMVSNGLQPDCITYTCLIHAHCERGLLREAR-----KIFNNMISDGLLPSAVTFTVIIH 563

Query: 552 GYQENGDLKSAF 563
            Y   G+L SA+
Sbjct: 564 AYCRRGNLYSAY 575


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 226/436 (51%), Gaps = 4/436 (0%)

Query: 81   LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            +P+I     +L  + K  KFD V   Y +M   G+  D+ ++ +LI C C    +  AL 
Sbjct: 601  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660

Query: 141  LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            L  +M+  G  P++V    L++G C  N+  EA S+  SM   G VPN+  YN +++G C
Sbjct: 661  LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720

Query: 201  KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
            K  D+N ALE ++ M    ++ + VT+  L+ GL   G    A      M K  + PN+ 
Sbjct: 721  KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             +  LID   K GNL EA +L  EM +  + P+VFTYN LI G C  G L  A+ +   M
Sbjct: 781  FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              +G   +VVTYN+LI G+CK   +E  + +  +MT +G+  +  T+++LI G C+AG +
Sbjct: 841  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            + A  ++  MV   + PD+V +  L+D L  +G +++ L + +++ ++++   + T + +
Sbjct: 901  NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            I GL +  ++  A   F   T K       P+ + Y  +I  LC  G   +A KL   M+
Sbjct: 961  IQGLCRTDKLKEAWCLFRSLTRKG----VKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016

Query: 501  SDNLRPDNCTYTTMLR 516
             D   P    Y   LR
Sbjct: 1017 EDGFMPSERIYDETLR 1032



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 224/426 (52%), Gaps = 4/426 (0%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           + LP+I     LL       ++++V  F ++M L G+  D+ ++ +LI C C    +  A
Sbjct: 66  QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L++  +M+  G EP++V +  L+HG C  N++ +A S+   M + G  PN+  YN L+DG
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK  ++N ALE  +EM    L  +VVT+  L+ GLC  G    A      M K  + P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +  LID   K GNL EA  L  EM +  + P+  TYN +I GLC  G+L  A+    
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G   NVVTYN+LI G+CK   +++ + +  +M+ +G   ++ T+++LI G C+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ ++  MV + + PD++    L+ GL  +G ++  L  + +M E++    +   +
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +IHGL K  ++  A   F       +G    P+   Y  +I  LC +G   +A +L   
Sbjct: 426 IMIHGLCKADKVEKAWELFCRL--PVEG--VKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 499 MRSDNL 504
           M+ + +
Sbjct: 482 MKEEGI 487



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 224/437 (51%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF EM+     P++V +T L+    N  +        + M   G+  +LY++  L+ 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VTFG L+ G C V  +  A +  + M K G  P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ VYN LIDG CK G L  A+ L +EMEK  +  DV TYN L+ GLC  G+   A  +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M K  I  +VVT+ +LID + K+G++++A  +  +M +  V+PN VT++S+I+G C  
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A   +  M  K   P+VV +  LI G  K   + E ++L++ M        +FT 
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LIHG  + G++  AL+ F     +      +P+ + +  ++  LC +G+I  A   F 
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRR----VTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DMR          Y  M+ GL +A ++     L   +   G+ PDA    +M+ G  +NG
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470

Query: 558 DLKSAFRCSEFLKESRI 574
             + A      +KE  I
Sbjct: 471 PRREADELIRRMKEEGI 487



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 228/441 (51%), Gaps = 4/441 (0%)

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A +LF EM+     P++V +T ++  +   NK      ++  M   G+  +LY++  L+ 
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             +C+ + ++ AL    +M+    +P++VT G L++G C+    + A +    M  FG  P
Sbjct: 648  CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            N+ +YN +I+G CK  +L  A+ +   MEK  I  D  TYN LI GL   G+   A  LL
Sbjct: 708  NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            + M K  I  NV+ + +LID + KEG++ +A ++  +M  + V PNV T++SLI+G C  
Sbjct: 768  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 827

Query: 378  GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            G +  A  ++  MV K   PDVV +  LI G  K   +++ ++L+ EM    +    FT 
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 438  SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            ++LIHG  + G+++ A   F    D       SP+ V Y  ++  LC +G+I KA  +  
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCG----VSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 498  DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            D++   +  D  TY  +++GL R  ++ +   L   + + G+ PDA+    M+ G    G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 558  DLKSAFRCSEFLKESRIGSSE 578
              + A +    +KE     SE
Sbjct: 1004 LQREADKLCRRMKEDGFMPSE 1024



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 223/453 (49%), Gaps = 8/453 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L  G +   +F+  +  + EMV    +  +V +  L+            +    +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   +  +TILIH  C  +++  A S+   M + G  P++ T+ +L+ G+C V  +  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+    +PNVV +  L+DGLCK GEL  A      M K G+  ++  YN L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C +G   +A  +  +M K  I+PDV T+  LI      G L+ A+ L ++M +  +  N 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYNS+I+G C  G +  A      M  KG  PNVVT+++LI G CK   +D  M L+  
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  +    D+  +  LI G  + G ++  L ++  M+  ++TP + T   L+HGL  NG 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 450 ISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           I +AL  F  + +++K  G       V Y  +I  LC   ++ KA +LF  +  + ++PD
Sbjct: 402 IESALVKFDDMRESEKYIG------IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             TYT M+ GL +     +   L+  M + GI+
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 181/357 (50%)

Query: 77   KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
            K+   P+I    +LLNG  +  +F       + M   G V +VV Y  +I+  C   D+ 
Sbjct: 667  KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 726

Query: 137  KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
             AL +F  M  KGI    V Y  LI GL N  +  +A  + R M +  + PN+  + AL+
Sbjct: 727  NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786

Query: 197  DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            D + K  ++  A   Y EM+  ++ PNV T+  L++G C  G L  A   F  M   G F
Sbjct: 787  DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846

Query: 257  PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            P++  YN LI G CK+  + + M L  EM    +  D FTYN LI G C  G+L  A+ +
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 317  LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              +M   G+  ++VTYN L+D  C  G +EKAL +   + +  ++ +++T++ +I G C+
Sbjct: 907  FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966

Query: 377  AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
               +  A  L+  +  K + PD + +  +I GL + G  +E  +L + M E    PS
Sbjct: 967  TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 190/379 (50%), Gaps = 3/379 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI  F     +  AL V  K+  L   P+I    +LL+G     +    +     MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +VV Y  LID  C  G++  AL L +EM  KG+   VV Y  L+ GLC   +  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  M R M +  + P++ T+ AL+D + K  +++ A E Y EM+  ++ PN VT+  ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLC  G L  A   F  MA  G FPN+  YN LI G CK   + E M L   M     +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D+FTYN LI G C VG+L  A  +   M    +  +++T+  L+ G C  G++E AL  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M E      +V ++ +I G CKA  ++ A  L+  + ++ + PD   +T +I GL K
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 412 DGNMKETLRLYKEMLEAKI 430
           +G  +E   L + M E  I
Sbjct: 469 NGPRREADELIRRMKEEGI 487



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 220/455 (48%), Gaps = 4/455 (0%)

Query: 99   KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
            KFD  +  + EM+    +  +V +  ++            + L+ +M + GI   +  +T
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 159  ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            ILIH  C  +++  A ++   M + G  P++ T  +L++G+C+      A+     M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 219  NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
               PNVV +  +++GLCK  +L  A   F  M K G+  +   YN LI G   +G   +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
              L  +M K +I P+V  +  LI      G L  A  L ++M +  ++ NV TYNSLI+G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 339  YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            +C  G +  A  +   M  KG  P+VVT+++LI G CK+  ++  M L+ EM  + LV D
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 399  VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
               +  LI G  + G +    +++  M++  ++P + T + L+  L  NG+I  AL   +
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL-VMV 942

Query: 459  EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            E   K++      + + Y  IIQ LC   ++ +A  LF  +    ++PD   Y TM+ GL
Sbjct: 943  EDLQKSE---MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999

Query: 519  LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             R     +   L   M + G +P   I    +R +
Sbjct: 1000 CRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 256/605 (42%), Gaps = 89/605 (14%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIK 96
           LN +E       V  ++TL+      G   +A  + R   K  + P +    AL++  +K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G  D   E Y+EM+   +  + VTY  +I+  C  G +  A   FD M  KG  P VV 
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI G C    + E   +F+ M   G   +++TYN L+ GYC+V  +  AL+ +  M+
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+++T  +L+ GLC  GE+ +A   F  M +   +  I  YN +I G CKA  + 
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A  L   +    + PD  TY I+I GLC  G    A+ L+++M +EGI+  +   +  +
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHL 498

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNV------VTFSSLIDGQCK-------AGN---- 379
           + +    + E +LS+          P        + FSS + G  +        GN    
Sbjct: 499 EEH-SSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPET 557

Query: 380 ---------------------------IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                                       D A  L+ EM+    +P +V FT ++  ++K 
Sbjct: 558 SLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM 617

Query: 413 GNMKETLRLYKEMLEAKIT-----------------------------------PSVFTV 437
                 + LY +M    I+                                   PS+ T+
Sbjct: 618 NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL 677

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            SL++G  +  R   A++      D  DG    PN V+Y  +I  LC +  +  A ++F 
Sbjct: 678 GSLLNGFCQGNRFQEAVSL----VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 733

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M    +R D  TY T++ GL  + R  D   LL DM+K  I P+ +    ++  + + G
Sbjct: 734 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 793

Query: 558 DLKSA 562
           +L  A
Sbjct: 794 NLLEA 798



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 4/378 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+        A   + EM+H    P++V F  L+     +        F   M  +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +++ +  LI   C+   L  A+S+  +M K    P + T+  L+ G C V ++  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+  M K G   NVV YN+LIDG CK G++  AL + ++M +KG+  +VVT+++L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C +G    A  +  +M+ +S+ PDVV FTALID   K GN+ E   LYKEM+++ + P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +S+I+GL  +GR+ +A   F    D      C PN V Y  +I   C    + +  K
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTF----DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M  +    D  TY T++ G  +  ++   + +   M+   + PD + + +++ G  
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397

Query: 555 ENGDLKSAFRCSEFLKES 572
            NG+++SA    + ++ES
Sbjct: 398 VNGEIESALVKFDDMRES 415



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 248/569 (43%), Gaps = 59/569 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V++TLI    + G +  AL +  ++E   +   +   N LL GL   G++       
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+   +  DVVT+  LID    QG++ +A  L+ EMI   ++P  V Y  +I+GLC  
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A+  F  M   G  PN+ TYN L+ G+CK   V+  ++ +  M       ++ T+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G C+VG+LR A + F  M    V P+I  +  L+ G C  G +  A+    +M +
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            E    +  YNI+I GLC   ++E A  L  ++  EG+  +  TY  +I G CK G   +
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY--------TEMVIKSLVPDV 399
           A  +  +M E+G+   +      ++    + N + ++ L             ++ L+P  
Sbjct: 475 ADELIRRMKEEGIICQMNAEDDHLEEH-SSSNKEISLSLREIWERSKSNPFWMQRLIP-- 531

Query: 400 VVFTALIDG-------LSKDGNMKET-------------------------------LRL 421
           + F++ + G       L + GN  ET                                 L
Sbjct: 532 IAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSL 591

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EML+++  PS+   + ++  + K     N  +  +    K +    S +   +  +I 
Sbjct: 592 FCEMLQSRPIPSIVDFTRVLTVIAK----MNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C   ++  A  L   M     RP   T  ++L G  +  R  + + L+  M   G VP
Sbjct: 648 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707

Query: 542 DAVINQVMVRGYQENGDLKSA---FRCSE 567
           + VI   ++ G  +N DL +A   F C E
Sbjct: 708 NVVIYNTVINGLCKNRDLNNALEVFYCME 736



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 4/290 (1%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++TLI   S  G   +A  + R   K ++ P +    AL++  +K+G        Y+EM
Sbjct: 746  TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 805

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            +   +V +V TY  LI+  C  G +  A  +FD M+ KG  P VV Y  LI G C   ++
Sbjct: 806  IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             +   +F  M   G+V + +TYN L+ GYC+   +N A + ++ M+   + P++VT+ +L
Sbjct: 866  EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925

Query: 231  MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            +D LC  G++  A      + K  +  +I  YN +I G C+   L EA  L   + +  +
Sbjct: 926  LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 291  SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN-SLIDGY 339
             PD   Y  +I GLC  G    A+ L ++M ++G + +   Y+ +L D Y
Sbjct: 986  KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 1035



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 5/223 (2%)

Query: 52   PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            P+VF+  +LI  F   G + +A +++  +      P +   N L+ G  K  + +   + 
Sbjct: 812  PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + EM   GLV D  TY  LI   C  G +  A  +F+ M+D G+ P +V Y IL+  LCN
Sbjct: 872  FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931

Query: 167  ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              K+ +A  M   +++  +  ++ TYN ++ G C+   +  A   +  +    ++P+ + 
Sbjct: 932  NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 991

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            +  ++ GLC+ G  R A      M + G  P+  +Y+  +  H
Sbjct: 992  YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++   L+ EM+ ++  PS+   + L+     N R    + +F +K +         +H L
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKME-----LYGISHDL 106

Query: 476 YA--AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           Y+   +I   C   ++  A  +   M      P   T+ ++L G     R+ D   L+  
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
           M+K G  P+ V+   ++ G  +NG+L  A      +++  +G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 240/465 (51%), Gaps = 8/465 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   +++ F+E G ++EA+ +  +++   ++P+ Q  N +L+  +  G  +     + EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D V++ +++  CC  G V++A    + M+++G        T++I   C +  +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                 F  M E G+ PN+  + AL++G CK   + +A E   EM+    +PNV T   L
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 231 MDGLCKVGELRAAGNFFVHMAKF-GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G    A   F+ + +  G  PN+  Y  +I+G+CK   L  A  L S M++  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+  TY  LI G C VG    A  L+  M KEG   N+ TYN++IDG CK+G +++A 
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++++  G++ + VT++ L+   C+  + + ++  + +M+     PD+  +T LI   
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTF 515

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   MKE+ RL++E +   + P+  T +S+I G  + G  S A+  F   ++      C
Sbjct: 516 CRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG----C 571

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +P+ + Y A+I  LC + ++  A  L+  M    L P   T  T+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 237/479 (49%), Gaps = 5/479 (1%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           + GK         EM   GLV    T   ++D   G G V  A N+F EM  +G+ P  V
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            + +++   CN  +++EAE    +M E G + +  T   ++D +C+   VNR + ++ +M
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +   L PNV+ F  L++GLCK G ++ A      M + G  PN++ +  LIDG CK G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 276 FEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            +A  L  ++ + +   P+V TY  +I G C   +L  AE LL +M ++G++ N  TY +
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+CK G+  +A  +   M ++G  PN+ T++++IDG CK G++D A  L  ++ +  
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L  D V +T L+    +  +   +L  + +ML+   TP + + ++LI    +  ++  + 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E           P    Y ++I   C  G    A KLF  M +    PD+ TY  +
Sbjct: 526 RLFEEAVSLG----LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           + GL +  ++ D   L   M+  G+ P  V    +   Y +  D  +A    + L++ +
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 212/413 (51%), Gaps = 10/413 (2%)

Query: 57  TLII-AFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           TLII AF + G++   +   W   ++ + P +    AL+NGL K+G     +E  EEMV 
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMV 171
            G   +V T+  LID  C +G   KA  LF +++   G +P V  YT +I+G C E+K+ 
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +   M+E G+VPN  TY  L+DG+CKV +  RA E    M      PN+ T+  ++
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAII 442

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK G L  A      ++  G+  +   Y  L+  HC+  +   ++   ++M K   +
Sbjct: 443 DGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT 502

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ +Y  LI   C   Q++ +E L ++    G++    TY S+I GYC+ G+   A+ +
Sbjct: 503 PDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKL 562

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             +M+  G  P+ +T+ +LI G CK   +D A  LY  M+ K L P +V   T   +   
Sbjct: 563 FQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCK 622

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           KD +      L  + LE +    + TV++L+  L   G++  A  FF +  DK
Sbjct: 623 KDDSSTAINVL--DRLEKR--QWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 198/419 (47%), Gaps = 5/419 (1%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           +K +E    +   ++       K+ EA +M   M+  G+VP+  T N ++D    +  V 
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVE 206

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + EM    + P+ V+F +++   C +G +  A  +   M + G   +      +I
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLII 266

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           D  C+ G +   +    +M +  ++P+V  +  LI GLC  G ++ A  LL++M + G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            NV T+ +LIDG CK+G  EKA  +  ++    G +PNV T++++I+G CK   ++ A  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L + M  + LVP+   +T LIDG  K GN      L   M +   +P+++T +++I GL 
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G +  A        +K        + V Y  ++   C      ++   F+ M      
Sbjct: 447 KKGSLDEAYRLL----NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT 502

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD  +YTT++    R K+M +   L  + + +G++P       M+ GY   G+   A +
Sbjct: 503 PDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 146/287 (50%), Gaps = 12/287 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N + ++TLI    ++G+   A   Y  ++++      P I   NA+++GL KKG  D  +
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRA---YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               ++ + GL AD VTY +L+   C Q D  ++L  F++M+  G  P +  YT LI   
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTF 515

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + +M E+E +F      G++P   TY +++ GYC+  + + A++ +  M +H   P+ 
Sbjct: 516 CRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDS 575

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+G L+ GLCK  +L  A N +  M   G+ P       L   +CK  +   A+++   
Sbjct: 576 ITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDR 635

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           +EK +    + T N L++ LC  G+L+ A     K+  +    N VT
Sbjct: 636 LEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 12/209 (5%)

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A+ +  EM  + LVP       ++D     G ++    ++ EM +  ++P   + 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 438 SSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             ++      GR+  A   LN  +E+    D   C+        II A C  G + +   
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCT-------LIIDAFCQKGYVNRVVG 280

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F  M    L P+   +T ++ GL +   +     LL +M++ G  P+   +  ++ G  
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340

Query: 555 ENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           + G  + AFR   FLK  R    +   HT
Sbjct: 341 KKGWTEKAFRL--FLKLVRSDGYKPNVHT 367


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 236/455 (51%), Gaps = 5/455 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            +S L   +  +G ++EA  V   + VLP+  A N L++ L  +G+        + M+  
Sbjct: 122 TYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYR 181

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DVVTY +L++  C      +A+ L D M  +G  PT V Y +++ G+C E  +  A
Sbjct: 182 GCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYA 241

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +  S+   G  PN   YN ++ G           E   EM   N  P+  T  V++  
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G  + A      M+K     NI  YN ++ G C+ G++  A+ L S M+     P+
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPN 361

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           +FTYNIL+KGLC   + E AE L+ KM +   L +++T+N++I   C++G   +A+ V  
Sbjct: 362 IFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK 421

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM EKG  PN VT+SS+I+G  K G ++ ++ L  EM  K   P+ + +  L + L+++ 
Sbjct: 422 QMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEED 480

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + E +++  ++ +  I+P     ++++ GL +NG+   A++        +DG  C P+ 
Sbjct: 481 KLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMV--SDG--CMPDE 536

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
             Y+ +IQ L ++G + +A +L S + S ++  DN
Sbjct: 537 STYSILIQGLAHEGYMKEARELLSTLSSRDVIVDN 571



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 237/511 (46%), Gaps = 38/511 (7%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++ AL V       P +   N L+  L ++G+        E    CG  A  VTY  L
Sbjct: 70  GELDAALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEA---CGSAATAVTYSAL 126

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
            D  C  G + +A  + D M    + P+   Y  L+H LC   ++ +A  +  +M   G 
Sbjct: 127 ADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGC 183

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P++ TYN L++  CK     +A+E    M      P  VT+ V+MDG+C+ G++  A  
Sbjct: 184 APDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARE 243

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               +  +G  PN   YN ++ G   AG   +   L +EM      P   T +++I  LC
Sbjct: 244 LLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G  + A  LL+KM K    AN+VTYN+++ G C++G ++ AL + S M   G +PN+ 
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ L+ G C A   + A  L  +M     +PD++ F  +I  L + G   + + ++K+M
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFF--------------------LEKTDK-- 463
            E    P+  T SS+I GL K G++  +L                       L + DK  
Sbjct: 424 PEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLV 483

Query: 464 ---------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                     D G  SP  VLY  I+  LC +G+  +A  + S+M SD   PD  TY+ +
Sbjct: 484 EAIQMVHKLQDTGI-SPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSIL 542

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           ++GL     M +   LL+ +    ++ D +I
Sbjct: 543 IQGLAHEGYMKEARELLSTLSSRDVIVDNLI 573



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 41/337 (12%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIE--EALWVYRKIEVLPAIQAC-NALLNGLIK 96
           LNSL      P+   ++T++      G  E  E L      E  P  +A  + +++ L +
Sbjct: 245 LNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQ 304

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G F       E+M      A++VTY  ++   C QG V  AL L   M   G +P +  
Sbjct: 305 EGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFT 364

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y IL+ GLCN  +  +AE +   M +   +P++ T+N ++   C+     +A+E + +M 
Sbjct: 365 YNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMP 424

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK------------------------ 252
                PN VT+  +++GL K G++  +      M                          
Sbjct: 425 EKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVE 484

Query: 253 ----------FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
                      G+ P   +YN ++ G C+ G   +A+ + S M      PD  TY+ILI+
Sbjct: 485 AIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQ 544

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYN--SLID 337
           GL   G ++ A  LL  +    ++ + +  N  SL+D
Sbjct: 545 GLAHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLD 581



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 10/296 (3%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++ + N L+   C+ G   +A  +   +E    +    TY+ L  G C VG+L+ A  +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARV---VEACGSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  M    +L +   YN L+   C  G +  AL +   M  +G  P+VVT++ L++  CK
Sbjct: 143 VDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
                 AM L   M ++   P  V +  ++DG+ ++G++     L   +     TP+   
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++++ GL   GR  +      E   +     C P+    + +I +LC +G   +A +L 
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSEN----CPPSEATLSVVISSLCQEGLFQRAIRLL 315

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             M   +   +  TY  ++ GL     +   + LL++M   G  P+     ++V+G
Sbjct: 316 EKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKG 371



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 16/240 (6%)

Query: 328 NVVTYNSLIDGYCKEG---DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +V   N L+   C+ G   D  + +  C      G     VT+S+L DG C+ G +D A 
Sbjct: 87  DVALANRLVRDLCRRGRPADAARVVEAC------GSAATAVTYSALADGYCRVGRLDEAR 140

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +   M +   +P    +  L+  L   G +++ L L   ML     P V T + L+   
Sbjct: 141 RVVDGMPV---LPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAA 197

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K      A+        + +G  C+P +V Y  I+  +C +G +  A +L + + S   
Sbjct: 198 CKGRGYRQAMELI--DLMRVEG--CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGC 253

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P+   Y T+L+GL  A R  DV  L+A+M      P      V++    + G  + A R
Sbjct: 254 TPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIR 313


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 204/364 (56%), Gaps = 6/364 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  +S  G IE A  +  +++     P +Q  N +L+ +  +G+     E   EM
Sbjct: 263 TYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREM 319

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GLV D V+Y +LI  C   GD+  A    DEM+ +G+ PT   Y  LIHGL  ENK+
Sbjct: 320 KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE + R +RE G+V +  TYN +++GYC+  D  +A   + EM+   ++P   T+  L
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSL 439

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LC+  + R A   F  +   G+ P++ + N L+DGHC  GN+  A SL  EM++  I
Sbjct: 440 IYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TYN L++GLCG G+ E A  L+ +M + GI  + ++YN+LI GY K+GD + A  
Sbjct: 500 DPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFI 559

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M   G  P ++T+++L+ G  K  + + A  L  EM  + +VP+   F ++I+ +S
Sbjct: 560 VRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619

Query: 411 KDGN 414
           K  N
Sbjct: 620 KSDN 623



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 10/427 (2%)

Query: 140 NLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +LFDE++   D+    + +++  ++   C    + EA   F  M+E G  P   T N ++
Sbjct: 139 DLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHIL 198

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
               ++  +  A  FY +M    ++ NV TF ++++ LCK G+L+ A  F   M  FG+ 
Sbjct: 199 SLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIK 258

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN L+ G+   G +  A  + SEM+     PD+ TYN ++  +C  G+   A  +
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEV 315

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L++M   G++ + V+YN LI G    GD+E A +   +M ++G+ P   T+++LI G   
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              I+AA  L  E+  K +V D V +  +I+G  + G+ K+   L+ EM+   I P+ FT
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI+ L +  +   A   F    +K  G    P+ V+   ++   C  G + +A  L 
Sbjct: 436 YTSLIYVLCRRNKTREADELF----EKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLL 491

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M   N+ PD+ TY  ++RGL    +  +   L+ +M + GI PD +    ++ GY + 
Sbjct: 492 KEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 551

Query: 557 GDLKSAF 563
           GD K AF
Sbjct: 552 GDTKHAF 558



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 237/473 (50%), Gaps = 14/473 (2%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  ++  + ++  ++EA+   ++ ++    P  + CN +L+ L +  + ++ W FY +M
Sbjct: 158 LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADM 217

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + ++V T+ ++I+  C +G + KA      M   GI+PT+V Y  L+ G     ++
Sbjct: 218 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRI 277

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M+  G  P+L TYN ++   C   +  RA E   EM    L P+ V++ +L
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMC---NEGRASEVLREMKGIGLVPDSVSYNIL 334

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G    G+L  A  +   M K G+ P  + YN LI G      +  A  L  E+ +  I
Sbjct: 335 IRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 394

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D  TYNI+I G C  G  + A  L  +M  +GI     TY SLI   C+     +A  
Sbjct: 395 VLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADE 454

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++  KG++P++V  ++L+DG C  GN+D A  L  EM   ++ PD V +  L+ GL 
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLC 514

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
            +G  +E   L  EM    I P   + ++LI G  K G   +A   F+ + +    G+ +
Sbjct: 515 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA---FIVRDEMLSLGF-N 570

Query: 471 PNHVLYAAIIQALC--YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           P  + Y A+++ L    DG++  A +L  +M+S+ + P++ ++ +++  + ++
Sbjct: 571 PTLLTYNALLKGLSKNQDGEL--AEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 257/543 (47%), Gaps = 29/543 (5%)

Query: 49  KFNPSVFSTLII--------AFSEMGHIEEALWVYRK-------IEVLPAIQACNALLNG 93
           K  PS+ ST ++        AF+ + HI+     ++        +  L + ++   LL  
Sbjct: 69  KLIPSLVSTTLLSLVKTPDLAFNFVNHIDLRCLDFQTQCLAIAVVSKLSSPKSVTQLLKE 128

Query: 94  LIKKGKFDSVWEFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++   K +SV + ++E+VL          + +  ++   C    V +A+  F  M +KG 
Sbjct: 129 VVSTRK-NSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGF 187

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           +P       ++  L   N++  A   +  M    +  N+YT+N +++  CK   + +A  
Sbjct: 188 DPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKG 247

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           F   M    ++P +VT+  L+ G    G +  A      M   G  P++  YN ++   C
Sbjct: 248 FLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMC 307

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G   E +    EM+   + PD  +YNILI+G    G LE A     +M K+G++    
Sbjct: 308 NEGRASEVL---REMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFY 364

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN+LI G   E  +E A  +  ++ EKG+  + VT++ +I+G C+ G+   A  L+ EM
Sbjct: 365 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEM 424

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   + P    +T+LI  L +    +E   L+++++   + P +  +++L+ G    G +
Sbjct: 425 MTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNM 484

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A +  L++ D+ +     P+ V Y  +++ LC +G+  +A +L  +M+   ++PD+ +
Sbjct: 485 DRAFS-LLKEMDRMN---IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 540

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           Y T++ G  +        ++  +M+ +G  P  +    +++G  +N D + A    E L+
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELA---EELLR 597

Query: 571 ESR 573
           E +
Sbjct: 598 EMK 600


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 268/535 (50%), Gaps = 10/535 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
            N +      PSV  ++ LI  +   G  +EA  V  +++   V P+    +ALLNG  K
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCK 416

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K     +  + +    +  +   Y +LID  C  G+V KA  +   M+  GI+P V+ 
Sbjct: 417 HSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVIT 476

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ LI+G+C    + E + +   M++ GV+PN   Y  L+  +CK      AL+++ ++ 
Sbjct: 477 YSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY 536

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              L  N V    L+    + G +  A  F  +M++  +  ++  +NC+ID +C+ GN+ 
Sbjct: 537 RSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 596

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA S+   M +    PD+ TY  L++GLC  G L  A+  +  + ++    +  T N+L+
Sbjct: 597 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 656

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G CK G +++AL +C +M  + + P+  T++ L+DG CK G +  A+ L   M+ K LV
Sbjct: 657 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 716

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNALN 455
           PD + +T L++GL  +G +K    +++E++ +  +       +S+++G  K G+I N + 
Sbjct: 717 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI-NEIE 775

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             +    + +     P+   Y  ++      GQ+ +   L+ DM  + ++PDN TY  ++
Sbjct: 776 RLMRNMHENE---VYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 832

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            GL     +   +  L  M+  G+ PD +   ++++ + E   + +A +   ++K
Sbjct: 833 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 279/603 (46%), Gaps = 80/603 (13%)

Query: 35  CYSVFNALNSLEIPKFNPS-VFST--LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACN 88
           C ++F++L    I + +P+ +FS   L+ A+ + G + +A   ++   +     ++ +CN
Sbjct: 141 CSAIFSSLLR-TISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCN 199

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK----------- 137
            +LN L+   K + VW F +E +      DV T  ++++  C QG + K           
Sbjct: 200 NILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNC 259

Query: 138 -----------------------ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
                                  AL + D+M   GIE  +  Y I+I  LC   +   A 
Sbjct: 260 RLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAY 319

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            + + MRE  + P+  +YN L+ G+     +N A+  +++ML  +L+P+V T+  L+DG 
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+ G    A      M   GV P+   Y+ L++G+CK   L  A+ L   +    IS + 
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINR 439

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             Y ILI G C +G++  A+ +L+ M  +GI  +V+TY++LI+G CK G + +   + S+
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 499

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP----------------- 397
           M + GV PN V +++L+   CKAG+   A+  + ++    LV                  
Sbjct: 500 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 559

Query: 398 ------------------DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
                             DV  F  +ID   + GN+ E   +Y  M+     P + T  S
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 619

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+ GL + G +  A  F +   +K     C+ +      ++  +C  G + +A  L   M
Sbjct: 620 LLRGLCQGGHLVQAKEFMVYLLEKA----CAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            + N+ PD  TYT +L G  +  +++  ++LL  M++ G+VPD +    ++ G    G +
Sbjct: 676 VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 735

Query: 560 KSA 562
           K+A
Sbjct: 736 KAA 738



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 263/589 (44%), Gaps = 108/589 (18%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC---------- 130
           LP     N +LN  +KKG+  S     ++M   G+ AD+ TY ++ID  C          
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 131 -------------------------GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
                                    G+G +  A+ +F++M+ + ++P+V  YT LI G C
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  EA  +   M+  GV P+  TY+AL++GYCK + +  AL+    +   ++  N  
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRT 440

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            + +L+DG C++GE+  A      M   G+ P++  Y+ LI+G CK G + E   + S M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGA-------------------EGLLQKMYKEGIL 326
           +K  + P+   Y  L+   C  G  + A                     LL   Y+EG++
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 327 A----------------NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           A                +V ++N +ID YC+ G++ +A SV   M   G  P++ T+ SL
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 371 IDGQ-----------------------------------CKAGNIDAAMGLYTEMVIKSL 395
           + G                                    CK G +D A+ L  +MV +++
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           +PD   +T L+DG  K G +   L L + MLE  + P     + L++GL   G++  A  
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F E   K +G Y   + + Y +++      GQI +  +L  +M  + + P + +Y  ++
Sbjct: 741 MFQEIICK-EGLY--ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 797

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            G ++  ++   + L  DM+K GI PD V  ++++ G  E G ++ A +
Sbjct: 798 HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK 846



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 259/547 (47%), Gaps = 61/547 (11%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALW----VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N  +++TL+  F + GH +EAL     +YR   V  ++   NALL    ++G      +F
Sbjct: 508  NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIH-NALLCSFYREGMIAEAEQF 566

Query: 107  YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             + M    +  DV ++  +ID  C +G+V++A +++D M+  G  P +  Y  L+ GLC 
Sbjct: 567  KQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 626

Query: 167  ENKMVEAESMFRSMRE--CGV---------------------------------VPNLYT 191
               +V+A+     + E  C +                                 +P+ YT
Sbjct: 627  GGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT 686

Query: 192  YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM- 250
            Y  L+DG+CK   V  AL     ML   L P+ + +  L++GL   G+++AA   F  + 
Sbjct: 687  YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 746

Query: 251  AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
             K G++ +   YN +++G+ K G + E   L   M + E+ P   +YNIL+ G    GQL
Sbjct: 747  CKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQL 806

Query: 311  EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                 L + M KEGI  + VTY  LI G C+ G +E A+    +M  +GV P+ + F  L
Sbjct: 807  SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 866

Query: 371  IDGQCK----------------AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
            I    +                 G+ID A  L  +M    +VP  V  ++++ GL K G 
Sbjct: 867  IKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 926

Query: 415  MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
            ++E + ++  ++ A + P++ T ++L+HGL K  +I +A  F L++  ++ G     + V
Sbjct: 927  VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA--FHLKQLMESCG--LKVDVV 982

Query: 475  LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             Y  +I  LC    I  A  L+ +M+S  L P+  TY T+   +     M D   LL D+
Sbjct: 983  TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 1042

Query: 535  IKMGIVP 541
               GIVP
Sbjct: 1043 EDRGIVP 1049



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 255/554 (46%), Gaps = 51/554 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
            N ++++ LI  F ++G + +A  + + +    + P +   +AL+NG+ K G      E 
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   G++ + V Y  L+   C  G   +AL  F ++   G+    VI+  L+     
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E  + EAE   + M    +  ++ ++N ++D YC+  +V  A   Y  M+ H   P++ T
Sbjct: 557 EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 616

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +G L+ GLC+ G L  A  F V++ +     +    N L+ G CK G L EA+ LC +M 
Sbjct: 617 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 676

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY------------------------- 321
              I PD +TY IL+ G C  G++  A  LLQ M                          
Sbjct: 677 TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 736

Query: 322 -----------KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                      KEG+ A+ + YNS+++GY K G + +   +   M E  V P+  +++ L
Sbjct: 737 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G  K G +   + LY +MV + + PD V +  LI GL + G ++  ++  ++M+   +
Sbjct: 797 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGY----------CSPNHVLYAA 478
            P       LI    +  ++SNAL  F  ++     DG +            P+ V  ++
Sbjct: 857 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESS 916

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           I++ LC  G++ +A  +FS +    + P   T+TT++ GL +  ++ D   L   M   G
Sbjct: 917 IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976

Query: 539 IVPDAVINQVMVRG 552
           +  D V   V++ G
Sbjct: 977 LKVDVVTYNVLITG 990



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 208/436 (47%), Gaps = 57/436 (13%)

Query: 54   VFSTLIIAFSEMGHIEEA--LWVYRKIEVLPAI--QACNALLNGLIKKGKFDSVWEFYEE 109
             + +L+    + GH+ +A    VY  +E   AI  +  N LL G+ K G  D   +  E+
Sbjct: 616  TYGSLLRGLCQGGHLVQAKEFMVYL-LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 674

Query: 110  MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            MV   ++ D  TY +L+D  C +G V+ AL L   M++KG+ P  + YT L++GL NE +
Sbjct: 675  MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 734

Query: 170  MVEAESMF------------------------------------RSMRECGVVPNLYTYN 193
            +  A  MF                                    R+M E  V P+  +YN
Sbjct: 735  VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 794

Query: 194  ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
             LM GY K   ++R L  Y +M+   ++P+ VT+ +L+ GLC+ G +  A  F   M   
Sbjct: 795  ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854

Query: 254  GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME-------KFEISPDVFTYNI------- 299
            GVFP+   ++ LI    +   +  A+ L S M+        FE+  D+    +       
Sbjct: 855  GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAE 914

Query: 300  --LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
              +++GLC  G++E A  +   + + G++  + T+ +L+ G CKE  ++ A  +   M  
Sbjct: 915  SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 974

Query: 358  KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             G++ +VVT++ LI G C    I  A+ LY EM  K L+P++  +  L   +   G M++
Sbjct: 975  CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 1034

Query: 418  TLRLYKEMLEAKITPS 433
              +L K++ +  I PS
Sbjct: 1035 GEKLLKDIEDRGIVPS 1050



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 208/417 (49%), Gaps = 5/417 (1%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +L++    E K+++A +    M ECG   +L++ N +++    +        F  E L  
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
               +V T  ++++ LC  G+L  A +    M K    PN   YN +++ + K G    A
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + +  +MEK  I  D++TYNI+I  LC + +   A  LL++M +  +  +  +YN+LI G
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +  EG +  A+ + +QM  + ++P+V T+++LIDG C+ G  D A  +  EM I  + P 
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPS 403

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            + ++AL++G  K   +   L L K +    I+ +    + LI G  + G +S A     
Sbjct: 404 ELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQIL- 462

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            K    DG    P+ + Y+A+I  +C  G I +  ++ S M+   + P+N  YTT++   
Sbjct: 463 -KCMLADG--IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 519

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            +A    + +    D+ + G+V ++VI+  ++  +   G +  A +  +++   +I 
Sbjct: 520 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKIS 576



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 40/322 (12%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+F  + L++ + K G + +A +    M++      +F+ N ++  L G+ + E     L
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++        +V T N +++  C +G + KA S+  +M    + PN VT++++++   K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G   +A+ +  +M    +  D+  +  +ID L K         L K M E  +TP   + 
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LIHG F                                        +G+I  A  +F+
Sbjct: 338 NTLIHGFFG---------------------------------------EGKINLAIYIFN 358

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M   +L+P   TYT ++ G  R  R  +   +L +M   G+ P  +    ++ GY ++ 
Sbjct: 359 QMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHS 418

Query: 558 DLKSAFRCSEFLKESRIGSSET 579
            L  A    ++L+   I  + T
Sbjct: 419 KLGPALDLIKYLRSRSISINRT 440


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 237/489 (48%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  D+ TYG+LI CCC  G +         +I KG     + +T L+ G
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M E G +PN+++YN L+ G C                      
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 201 ----------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
                           K  D ++A   YHEML   + P+VVT+  ++  LCK   +  A 
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M K GV P+   YN ++ G+C +G   EA+    +M    + PDV TY++L+  L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ P+ 
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             FS LI    K G +D AM ++++M  + L P+ V + A+I  L K G +++ +  +++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  ++P     +SLIHGL    +   A    LE  D+   G C  N + + +II + C
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---GIC-LNTIFFNSIIDSHC 487

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++P+  TY T++ G   A +M + M LL+ M+ +G+ P+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 548 TYSTLINGY 556



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 251/499 (50%), Gaps = 7/499 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I  F + G  ++A   Y ++    +LP +   N+++  L K    D   E    MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G++ D +TY  ++   C  G   +A+    +M   G+EP VV Y++L+  LC   + +
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F SM + G+ P + TY  L+ GY     +         M+ + + P+   F +L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
               K G++  A   F  M + G+ PN   Y  +I   CK+G + +AM    +M    +S
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P    YN LI GLC   + E AE L+ +M   GI  N + +NS+ID +CKEG + ++  +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   GV+PNV+T+++LI+G C AG +D AM L + MV   L P+ V ++ LI+G  K
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              M++ L L+KEM  + ++P + T + ++ GLF+  R + A   ++  T+       S 
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               Y  I+  LC +     A ++F ++   +L+ +  T+  M+  LL+  R  +   L 
Sbjct: 619 ----YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674

Query: 532 ADMIKMGIVPDAVINQVMV 550
                 G+VP+    ++M 
Sbjct: 675 VAFSSNGLVPNYWTYRLMA 693



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 229/450 (50%), Gaps = 15/450 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMK 137
           +P + + N LL GL  + +     E    M      G   DVV+Y  +I+    +GD  K
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A + + EM+D+GI P VV Y  +I  LC    M +A  +  +M + GV+P+  TYN+++ 
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC       A+ F  +M    ++P+VVT+ +LMD LCK G    A   F  M K G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            I  Y  L+ G+   G L E   L   M +  I PD + ++ILI      G+++ A  + 
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM ++G+  N VTY ++I   CK G +E A+    QM ++G+ P  + ++SLI G C  
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
              + A  L  EM+ + +  + + F ++ID   K+G + E+ +L++ M+   + P+V T 
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAAIIQALCYDGQILKAS 493
           ++LI+G    G++  A+            G  S    PN V Y+ +I   C   ++  A 
Sbjct: 515 NTLINGYCLAGKMDEAMKLL--------SGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            LF +M S  + PD  TY  +L+GL + +R
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRR 596



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 235/469 (50%), Gaps = 4/469 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   ++NG  K+G  D  +  Y EM+  G++ DVVTY  +I   C    + KA+ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + M+  G+ P  + Y  ++HG C+  +  EA    + MR  GV P++ TY+ LMD  CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A + +  M    L+P + T+G L+ G    G L         M + G+ P+ +V
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           ++ LI  + K G + +AM + S+M +  ++P+  TY  +I  LC  G++E A    ++M 
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            EG+    + YNSLI G C     E+A  +  +M ++G+  N + F+S+ID  CK G + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            +  L+  MV   + P+V+ +  LI+G    G M E ++L   M+   + P+  T S+LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  K  R+ +AL  F E     +    SP+ + Y  I+Q L    +   A +L+  +  
Sbjct: 554 NGYCKISRMEDALVLFKE----MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
              + +  TY  +L GL + K   D + +  ++  M +  +A    +M+
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 261/552 (47%), Gaps = 18/552 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I A  +   +++A+ V     K  V+P     N++L+G    G+      F ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DVVTY +L+D  C  G  M+A  +FD M  +G++P +  Y  L+ G   +  +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VE   +   M   G+ P+ Y ++ L+  Y K   V++A+  + +M    L PN VT+G +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A  +F  M   G+ P   VYN LI G C       A  L  EM    I
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +   +N +I   C  G++  +E L + M + G+  NV+TYN+LI+GYC  G M++A+ 
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S M   G++PN VT+S+LI+G CK   ++ A+ L+ EM    + PD++ +  ++ GL 
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +         LY  + E+     + T + ++HGL KN    +AL  F           C 
Sbjct: 593 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN--------LCL 644

Query: 471 PNHVLYAA----IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            +  L A     +I AL   G+  +A  LF    S+ L P+  TY  M   ++    + +
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
           +  L   M   G   D+ +   +VR   + G++  A      + E        E  T   
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF---SLEASTASL 761

Query: 587 FLGHLKPTVYKE 598
           F+  L    Y+E
Sbjct: 762 FIDLLSGGKYQE 773



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 9/274 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    ++     A+S  ++M   G   V P++ T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C+AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P+VF+ + L+ GL    R   AL       D   GG   P+ V Y  +I     +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG-SPPDVVSYTTVINGFFKE 209

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G   KA   + +M    + PD  TY +++  L +A+ M   M +L  M+K G++PD +  
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             ++ GY  +G  K A     FLK+ R    E +
Sbjct: 270 NSILHGYCSSGQPKEAI---GFLKKMRSDGVEPD 300



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 3/202 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +STLI  + ++  +E+AL +++++E   V P I   N +L GL +  +  +  E
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y  +   G   ++ TY +++   C       AL +F  +    ++     + I+I  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  EA+ +F +    G+VPN +TY  + +       +    + +  M  +    +  
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722

Query: 226 TFGVLMDGLCKVGELRAAGNFF 247
               ++  L + GE+  AG + 
Sbjct: 723 MLNFIVRELLQRGEITRAGTYL 744


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 223/401 (55%), Gaps = 4/401 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           + + +++G  K G+     +  +EM   G+  + + Y  L+D    + D  +   +   M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GIEPTV  YTIL+ GL     + + E++F  M+   +  ++Y Y+++++ YC+  +V
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA E + E + + ++PN  T+G L++G CK+G++ AA      M   GV  N  V+N +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+   + +A+ +   MEK  I  DV+TYN L  GL    +++ A+ LL+ M ++G+
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V+Y +LI  +C EGDM +A  +  +M   G EP++VT++ ++DG  K G+I  A  
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 444

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K LVPD+  + AL+ G   +G +   LRL++EM +    P++   ++LI GL 
Sbjct: 445 FKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 504

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           K GR   A   +    D   G   +P+  LY+A++ +L  D
Sbjct: 505 KEGRSEEAFQLY----DNMLGDGLTPDDALYSALVGSLHTD 541



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 203/398 (51%), Gaps = 4/398 (1%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T +  ++++ G C   ++  A  +   M   GV  N   YN+L+D Y +  D +R  E  
Sbjct: 142 TPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M +  ++P V T+ +L+DGL    ++      F  M    +  +++ Y+ +I+ +C+A
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN+  A  +  E     I P+  TY  LI G C +GQ+E AE L+  M   G+  N + +
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDGYC++  ++KAL +   M + G+E +V T+++L  G  +A  +D A  L   M+ 
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + P+ V +T LI     +G+M E  RL++EM      PS+ T + ++ G  K G I  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  F  E   K       P+   YAA++   C +G++  A +LF +M+    +P+   YT
Sbjct: 442 AERFKNEMEKKG----LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            ++ GL +  R  +   L  +M+  G+ PD  +   +V
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 5/427 (1%)

Query: 98  GKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           G  D+  +  ++    C      ++  V++D  C  G V  A  L DEM   G++   + 
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L+     E        M + M   G+ P + TY  L+DG     D+ +    + EM 
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             NL  +V  +  +++  C+ G +R A   F      G+ PN   Y  LI+G CK G + 
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L ++M+   +  +   +N +I G C    ++ A  +   M K GI  +V TYN+L 
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G  +   M++A ++   M EKGV PN V++++LI   C  G++  A  L+ EM      
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +  ++DG  K G+++E  R   EM +  + P +++ ++L+HG   NG++  AL  
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRL 480

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E   +       PN V Y A+I  L  +G+  +A +L+ +M  D L PD+  Y+ ++ 
Sbjct: 481 FEEMKQRG----SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 536

Query: 517 GLLRAKR 523
            L   K+
Sbjct: 537 SLHTDKK 543



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 7/353 (1%)

Query: 222 PNVVT---FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           P+ VT     V++DG CK G +  A      M + GV  N   YN L+D + +  +    
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   ME   I P V TY IL+ GL     +   E + ++M  + +  +V  Y+S+I+ 
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YC+ G++ +A  V  +    G+EPN  T+ +LI+G CK G ++AA  L T+M ++ +  +
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            +VF  +IDG  +   + + L +   M +  I   V+T ++L  GL +  R+  A N   
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              +K       PNHV Y  +I   C +G +++A +LF +M  +   P   TY  M+ G 
Sbjct: 378 IMIEKG----VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           ++   + +      +M K G+VPD      +V G+  NG +  A R  E +K+
Sbjct: 434 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 20  DVTENLL-----KSRKPHHVCYSVF-----NALNSLEIPKF---------NPSV--FSTL 58
           D  +NLL     K  +P+HV Y+       N  + +E  +           PS+  ++ +
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429

Query: 59  IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           +  + + G I EA     ++E   ++P I +  AL++G    GK D     +EEM   G 
Sbjct: 430 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
             ++V Y  LI     +G   +A  L+D M+  G+ P   +Y+ L+  L  + K
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 226/436 (51%), Gaps = 4/436 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P+I     +L  + K  KFD V   Y +M   G+  D+ ++ +LI C C    +  AL 
Sbjct: 76  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L  +M+  G  P++V    L++G C  N+  EA S+  SM   G VPN+  YN +++G C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  D+N ALE ++ M    ++ + VT+  L+ GL   G    A      M K  + PN+ 
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  LID   K GNL EA +L  EM +  + P+VFTYN LI G C  G L  A+ +   M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VVTYN+LI G+CK   +E  + +  +MT +G+  +  T+++LI G C+AG +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  ++  MV   + PD+V +  L+D L  +G +++ L + +++ ++++   + T + +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL +  ++  A   F   T K       P+ + Y  +I  LC  G   +A KL   M+
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKG----VKPDAIAYITMISGLCRKGLQREADKLCRRMK 491

Query: 501 SDNLRPDNCTYTTMLR 516
            D   P    Y   LR
Sbjct: 492 EDGFMPSERIYDETLR 507



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 228/441 (51%), Gaps = 4/441 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +LF EM+     P++V +T ++  +   NK      ++  M   G+  +LY++  L+ 
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT G L++G C+    + A +    M  FG  P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +I+G CK  +L  A+ +   MEK  I  D  TYN LI GL   G+   A  LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M K  I  NV+ + +LID + KEG++ +A ++  +M  + V PNV T++SLI+G C  
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  ++  MV K   PDVV +  LI G  K   +++ ++L+ EM    +    FT 
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LIHG  + G+++ A   F    D       SP+ V Y  ++  LC +G+I KA  +  
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCG----VSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D++   +  D  TY  +++GL R  ++ +   L   + + G+ PDA+    M+ G    G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 558 DLKSAFRCSEFLKESRIGSSE 578
             + A +    +KE     SE
Sbjct: 479 LQREADKLCRRMKEDGFMPSE 499



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 181/357 (50%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+   P+I    +LLNG  +  +F       + M   G V +VV Y  +I+  C   D+ 
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL +F  M  KGI    V Y  LI GL N  +  +A  + R M +  + PN+  + AL+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           D + K  ++  A   Y EM+  ++ PNV T+  L++G C  G L  A   F  M   G F
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  YN LI G CK+  + + M L  EM    +  D FTYN LI G C  G+L  A+ +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M   G+  ++VTYN L+D  C  G +EKAL +   + +  ++ +++T++ +I G C+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
              +  A  L+  +  K + PD + +  +I GL + G  +E  +L + M E    PS
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 220/455 (48%), Gaps = 4/455 (0%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           KFD  +  + EM+    +  +V +  ++            + L+ +M + GI   +  +T
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILIH  C  +++  A ++   M + G  P++ T  +L++G+C+      A+     M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
              PNVV +  +++GLCK  +L  A   F  M K G+  +   YN LI G   +G   +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             L  +M K +I P+V  +  LI      G L  A  L ++M +  ++ NV TYNSLI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           +C  G +  A  +   M  KG  P+VVT+++LI G CK+  ++  M L+ EM  + LV D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              +  LI G  + G +    +++  M++  ++P + T + L+  L  NG+I  AL   +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL-VMV 417

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E   K++      + + Y  IIQ LC   ++ +A  LF  +    ++PD   Y TM+ GL
Sbjct: 418 EDLQKSE---MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            R     +   L   M + G +P   I    +R +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 4/290 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI   S  G   +A  + R   K ++ P +    AL++  +K+G        Y+EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +V +V TY  LI+  C  G +  A  +FD M+ KG  P VV Y  LI G C   ++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +   +F  M   G+V + +TYN L+ GYC+   +N A + ++ M+   + P++VT+ +L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LC  G++  A      + K  +  +I  YN +I G C+   L EA  L   + +  +
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN-SLIDGY 339
            PD   Y  +I GLC  G    A+ L ++M ++G + +   Y+ +L D Y
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 5/223 (2%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+VF+  +LI  F   G + +A +++  +      P +   N L+ G  K  + +   + 
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           + EM   GLV D  TY  LI   C  G +  A  +F+ M+D G+ P +V Y IL+  LCN
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A  M   +++  +  ++ TYN ++ G C+   +  A   +  +    ++P+ + 
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +  ++ GLC+ G  R A      M + G  P+  +Y+  +  H
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 42/190 (22%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  L+ EM+    +P +V FT ++  ++K       + LY +M    I+  +++ + L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH                                         C   ++  A  L   M 
Sbjct: 121 IH---------------------------------------CFCRCSRLSLALALLGKMM 141

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
               RP   T  ++L G  +  R  + + L+  M   G VP+ VI   ++ G  +N DL 
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201

Query: 561 SA---FRCSE 567
           +A   F C E
Sbjct: 202 NALEVFYCME 211


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 232/472 (49%), Gaps = 10/472 (2%)

Query: 55  FSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +ST++ +  E    + AL      V +     P + + N +++G  ++G+       + E
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G+V DVVTY   ID  C    + KA  +  +MI  G EP  V Y  +IHG     +
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             E   MFR M   G++P+++T N+ M   CK      A EF+  M     +P++VT+ V
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G    G +    N F  M   G+  +  VYN LID + K G + EAM + ++M++  
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD +TY  +I     +G+L  A     +M   G+  + + YNSLI G+C  G++ KA 
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492

Query: 350 SVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            + S+M  +G+  PN V F+S+I+  CK G +  A  ++  ++     PDV+ F +LIDG
Sbjct: 493 ELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
               G M++   +   M+   I P V T S+L+ G  +NGRI + L  F E   K     
Sbjct: 553 YGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG---- 608

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             P  + Y  I+  L  DG+ + A K+  +M       D  T   +L GL R
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 230/449 (51%), Gaps = 8/449 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES-MF 177
           V TY +L+DCCC          LF   +  G++  V++  IL+  LC+  +  +A + + 
Sbjct: 119 VCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLL 178

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLC 235
             M E GV P+  +Y+ ++   C+ +   RAL+  H M+  +    PNVV++  ++ G  
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFF 238

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + GE+  A N F  M + GV P++  Y+  ID  CKA  + +A  +  +M      PD  
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV 298

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN +I G   +GQ +   G+ ++M + G++ ++ T NS +   CK G  ++A      M
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             KG +P++VT+S L+ G    G +   + L+  M    +V D  V+  LID   K G M
Sbjct: 359 AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E + ++ +M E  + P  +T  ++I    + GR+++A++ F    ++       P+ ++
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF----NQMIAMGLKPDTIV 474

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           Y ++IQ  C  G ++KA +L S+M S  + RP+   + +++  L +  R+++   +   +
Sbjct: 475 YNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLV 534

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           I +G  PD +    ++ GY   G ++ AF
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKMEKAF 563



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 233/474 (49%), Gaps = 8/474 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYT 158
           D+V      M   G+  D ++Y  ++   C      +AL+L   M+ K  G  P VV Y 
Sbjct: 172 DAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYN 231

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +IHG   E ++ +A ++F  M + GVVP++ TY++ +D  CK   +++A     +M+ +
Sbjct: 232 TVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN 291

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             +P+ VT+  ++ G   +G+ +     F  M + G+ P+IF  N  +   CK G   EA
Sbjct: 292 GFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEA 351

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
                 M      PD+ TY++L+ G    G +     L   M   GI+A+   YN LID 
Sbjct: 352 AEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDA 411

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           Y K G M++A+ + +QM E+GV P+  T+ ++I    + G +  AM  + +M+   L PD
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPD 471

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT-PSVFTVSSLIHGLFKNGRISNALNFF 457
            +V+ +LI G    GN+ +   L  EM+   I  P+    +S+I+ L K GR+  A + F
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
               D        P+ + + ++I      G++ KA  +   M S  + PD  TY+ +L G
Sbjct: 532 ----DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSEFLK 570
             R  R+ D ++L  +M+  G+ P  +   +++ G   +G    A + C E ++
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 235/487 (48%), Gaps = 6/487 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R    LP +   N L++   +  +    +  +   +  GL  DV+   +L+ C C     
Sbjct: 111 RPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRS 170

Query: 136 MKALN-LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTY 192
             A+N L   M + G+EP  + Y+ ++  LC +++   A  +  +M  +  G  PN+ +Y
Sbjct: 171 DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSY 230

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N ++ G+ +  +V++A   +HEM+   + P+VVT+   +D LCK   +  A      M  
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P+   YNC+I G+   G   E   +  EM +  + PD+FT N  +  LC  G+ + 
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A      M  +G   ++VTY+ L+ GY  EG +   L++ + M   G+  +   ++ LID
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
              K G +D AM ++T+M  + ++PD   +  +I   S+ G + + +  + +M+   + P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
                +SLI G   +G +  A     E   +   G   PN V + +II +LC +G++++A
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMMSR---GIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             +F  +     RPD  T+ +++ G     +M     +L  MI +GI PD V    ++ G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 553 YQENGDL 559
           Y  NG +
Sbjct: 588 YCRNGRI 594



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 240/509 (47%), Gaps = 49/509 (9%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P    ++ +I  +S +G  +E   ++R++    ++P I  CN+ ++ L K GK     
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           EF++ M   G   D+VTY VL+     +G V+  LNLF+ M   GI     +Y ILI   
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                M EA  +F  M+E GV+P+ +TY  ++  + ++  +  A++ +++M+   L+P+ 
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + +  L+ G C  G L  A      M   G+  PN   +N +I+  CK G + EA  +  
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFD 532

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +      PDV T+N LI G   VG++E A G+L  M   GI  +VVTY++L+DGYC+ G
Sbjct: 533 LVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNG 592

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLI-----DGQ------------------------ 374
            ++  L +  +M  KGV+P  +T+  ++     DG+                        
Sbjct: 593 RIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 375 ------CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
                 C+    D A+ L+ ++   ++  ++ +   +ID + K    +E   L+  +   
Sbjct: 653 IILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISAT 712

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
            + P+  T   +I  L K G +  A N F  +EK+       C+P+  L   II+ L   
Sbjct: 713 GLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG------CAPSSRLLNNIIRVLLEK 766

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTML 515
           G+I KA    S +    +  +  T + ML
Sbjct: 767 GEISKAGNYLSKVDGKTISLEASTASLML 795



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 181/381 (47%), Gaps = 7/381 (1%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
            +P + TYN LMD  C+          +   L   L+ +V+   +L+  LC       A 
Sbjct: 115 ALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAV 174

Query: 245 NFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILI 301
           N  +H M + GV P+   Y+ ++   C+      A+ L   M K     SP+V +YN +I
Sbjct: 175 NVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVI 234

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G    G++  A  L  +M ++G++ +VVTY+S ID  CK   M+KA  V  QM   G E
Sbjct: 235 HGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE 294

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ VT++ +I G    G      G++ EM  + L+PD+    + +  L K G  KE    
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  M      P + T S L+HG    G + + LN F    +  +G     +H +Y  +I 
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLF----NSMEGNGIVADHSVYNILID 410

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A    G + +A  +F+ M+   + PD  TY T++    R  R+ D M     MI MG+ P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 542 DAVINQVMVRGYQENGDLKSA 562
           D ++   +++G+  +G+L  A
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKA 491



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 205/439 (46%), Gaps = 21/439 (4%)

Query: 27  KSRKPHHVCYSVF--------------NALNSLEIPKF--NPSVFSTLIIAFSEMGHIEE 70
           K  KP  V YSV               N  NS+E      + SV++ LI A+ + G ++E
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420

Query: 71  ALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
           A+ ++ +++   V+P       ++    + G+     + + +M+  GL  D + Y  LI 
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480

Query: 128 CCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             C  G+++KA  L  EM+ +GI  P  V +  +I+ LC E ++VEA+ +F  +   G  
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGER 540

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ T+N+L+DGY  V  + +A      M+   ++P+VVT+  L+DG C+ G +      
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M   GV P    Y  ++ G    G    A  +C EM +   + D+ T  I++ GLC 
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
               + A  L +K+    +  N+   N++ID   K    E+A  +   ++  G+ PN  T
Sbjct: 661 NNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAST 720

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +  +I    K G+++ A  +++ M      P   +   +I  L + G + +    Y   +
Sbjct: 721 YGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGN-YLSKV 779

Query: 427 EAKITPSVFTVSSLIHGLF 445
           + K      + +SL+  LF
Sbjct: 780 DGKTISLEASTASLMLSLF 798


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 223/401 (55%), Gaps = 4/401 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           + + +++G  K G+     +  +EM   G+  + + Y  L+D    + D  +   +   M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GIEPTV  YTIL+ GL     + + E++F  M+   +  ++Y Y+++++ YC+  +V
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA E + E + + ++PN  T+G L++G CK+G++ AA      M   GV  N  V+N +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+   + +A+ +   MEK  I  DV+TYN L  GL    +++ A+ LL+ M ++G+
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V+Y +LI  +C EGDM +A  +  +M   G EP++VT++ ++DG  K G+I  A  
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 444

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K LVPD+  + AL+ G   +G +   LRL++EM +    P++   ++LI GL 
Sbjct: 445 FKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 504

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           K GR   A   +    D   G   +P+  LY+A++ +L  D
Sbjct: 505 KEGRSEEAFQLY----DNMLGDGLTPDDALYSALVGSLHTD 541



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 203/398 (51%), Gaps = 4/398 (1%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T +  ++++ G C   ++  A  +   M   GV  N   YN+L+D Y +  D +R  E  
Sbjct: 142 TPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M +  ++P V T+ +L+DGL    ++      F  M    +  +++ Y+ +I+ +C+A
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN+  A  +  E     I P+  TY  LI G C +GQ+E AE L+  M   G+  N + +
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDGYC++  ++KAL +   M + G+E +V T+++L  G  +A  +D A  L   M+ 
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K + P+ V +T LI     +G+M E  RL++EM      PS+ T + ++ G  K G I  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  F  E   K       P+   YAA++   C +G++  A +LF +M+    +P+   YT
Sbjct: 442 AERFKKEMEKKG----LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYT 497

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            ++ GL +  R  +   L  +M+  G+ PD  +   +V
Sbjct: 498 ALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 205/427 (48%), Gaps = 5/427 (1%)

Query: 98  GKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           G  D+  +  ++    C      ++  V++D  C  G V  A  L DEM   G++   + 
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L+     E        M + M   G+ P + TY  L+DG     D+ +    + EM 
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             NL  +V  +  +++  C+ G +R A   F      G+ PN   Y  LI+G CK G + 
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L ++M+   +  +   +N +I G C    ++ A  +   M K GI  +V TYN+L 
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G  +   M++A ++   M EKGV PN V++++LI   C  G++  A  L+ EM      
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +  ++DG  K G+++E  R  KEM +  + P +++ ++L+HG   NG++  AL  
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRL 480

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E   +       PN V Y A+I  L  +G+  +A +L+ +M  D L PD+  Y+ ++ 
Sbjct: 481 FEEMKQRG----SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 536

Query: 517 GLLRAKR 523
            L   K+
Sbjct: 537 SLHTDKK 543



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 7/353 (1%)

Query: 222 PNVVT---FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           P+ VT     V++DG CK G +  A      M + GV  N   YN L+D + +  +    
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   ME   I P V TY IL+ GL     +   E + ++M  + +  +V  Y+S+I+ 
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YC+ G++ +A  V  +    G+EPN  T+ +LI+G CK G ++AA  L T+M ++ +  +
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            +VF  +IDG  +   + + L +   M +  I   V+T ++L  GL +  R+  A N   
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              +K       PNHV Y  +I   C +G +++A +LF +M  +   P   TY  M+ G 
Sbjct: 378 IMIEKG----VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           ++   + +      +M K G+VPD      +V G+  NG +  A R  E +K+
Sbjct: 434 IKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 24/174 (13%)

Query: 20  DVTENLL-----KSRKPHHVCYSVF-----NALNSLEIPKF---------NPSV--FSTL 58
           D  +NLL     K  +P+HV Y+       N  + +E  +           PS+  ++ +
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429

Query: 59  IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           +  + + G I EA    +++E   ++P I +  AL++G    GK D     +EEM   G 
Sbjct: 430 MDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
             ++V Y  LI     +G   +A  L+D M+  G+ P   +Y+ L+  L  + K
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 215/374 (57%), Gaps = 4/374 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P+  T    + G+C    +++AL F+ +++      + V++G L++GLCKVGE +AA
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                      V P++ +YN +IDG CK  ++ +A  L SE     I PDVFTYN LI G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C VG+L+ A  L  KM  + I+ +V T++ L+DG+CK+G++++A +V + M ++ ++P+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+SSL+DG C    ++ A  ++  M  + +  +V  +  +I+G  K   + E ++L+K
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM   +I P V T SSLI GL K+GRIS AL    E  D+       P+ + Y +I+ AL
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYAL----ELVDEMHYRGQQPDIITYNSILDAL 553

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C    + KA  L + ++   +RPD  TYT +++GL ++ ++ D   +  D++  G   D 
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 544 VINQVMVRGYQENG 557
               VM++G+ + G
Sbjct: 614 YAYTVMIQGFCDKG 627



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 231/441 (52%), Gaps = 7/441 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   D +T    I   C +G + +AL+  D++I  G     V Y  LI+GLC   +   A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R      V P++  YN ++DG CK   VN A + Y E +   + P+V T+  L+ G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C VG+L+ A + F  M    + P+++ ++ L+DG CK GN+ EA ++ + M K  I PD
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TY+ L+ G C V ++  AE +   M   G+ ANV +YN +I+G+CK   +++A+ +  
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  K + P+V+T+SSLIDG CK+G I  A+ L  EM  +   PD++ + +++D L K  
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ + + L  ++    I P + T + L+ GL ++G++ +A   F    D    GY + + 
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVF---EDLLVKGY-NLDV 613

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +IQ  C  G   +A  L S M  +   PD  TY  ++  L           LL +
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLRE 673

Query: 534 MIKMGI---VPDAVINQVMVR 551
           MI  G+   + D ++  ++VR
Sbjct: 674 MIMRGLLVALTDDLVASILVR 694



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 225/418 (53%), Gaps = 4/418 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P        + G   KG+      F+++++  G   D V+YG LI+  C  G+   AL L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
                 K ++P VV+Y  +I G+C +  + +A  ++       + P+++TYNAL+ G+C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  +  A++ +++M   N+ P+V TF +L+DG CK G ++ A N    M K  + P++  
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ L+DG+C    + +A S+ + M    ++ +V +YNI+I G C +  ++ A  L ++M+
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            + I  +V+TY+SLIDG CK G +  AL +  +M  +G +P+++T++S++D  CK  ++D
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L T++  + + PD+  +T L+ GL + G +++  ++++++L       V+  + +I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            G    G    AL        K +   C P+   Y  II +L    +   A KL  +M
Sbjct: 621 QGFCDKGLFDEALALL----SKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 214/407 (52%), Gaps = 4/407 (0%)

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +++  G EP  +  T  I G C + ++ +A      +   G   +  +Y  L++G CKV 
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +   ALE         +QP+VV +  ++DG+CK   +  A + +       +FP++F YN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI G C  G L +A+ L ++M    I PDV+T++IL+ G C  G ++ A+ +L  M K+
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            I  +VVTY+SL+DGYC   ++ KA S+ + M+ +GV  NV +++ +I+G CK   +D A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M L+ EM  K + PDV+ +++LIDGL K G +   L L  EM      P + T +S++  
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K   +  A+        K  G    P+   Y  +++ LC  G++  A K+F D+    
Sbjct: 553 LCKKHHVDKAITLL----TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
              D   YT M++G        + + LL+ M + G +PDA   ++++
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 201/377 (53%), Gaps = 7/377 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + TLI    ++G  + AL + R+ +   V P +   N +++G+ K    +  ++ Y E V
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DV TY  LI   C  G +  A++LF++M  K I P V  ++IL+ G C +  + 
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+++   M +  + P++ TY++LMDGYC V +VN+A   ++ M H  +  NV ++ +++
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G CK+  +  A   F  M    +FP++  Y+ LIDG CK+G +  A+ L  EM      
Sbjct: 481 NGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ 540

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TYN ++  LC    ++ A  LL K+  +GI  ++ TY  L+ G C+ G +E A  V
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL-S 410
              +  KG   +V  ++ +I G C  G  D A+ L ++M     +PD   +  +I  L  
Sbjct: 601 FEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFE 660

Query: 411 KDGN-MKETLRLYKEML 426
           KD N M E  +L +EM+
Sbjct: 661 KDENDMAE--KLLREMI 675



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 197/346 (56%), Gaps = 3/346 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++T+I    +  H+ +A  +Y +     + P +   NAL++G    GK     + + +M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               ++ DV T+ +L+D  C  G++ +A N+   M+ + I+P VV Y+ L+ G C  N++
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AES+F +M   GV  N+ +YN +++G+CK+  V+ A++ + EM H  + P+V+T+  L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK G +  A      M   G  P+I  YN ++D  CK  ++ +A++L ++++   I
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+ TY IL+KGLC  G+LE A  + + +  +G   +V  Y  +I G+C +G  ++AL+
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           + S+M E G  P+  T+  +I    +    D A  L  EM+++ L+
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 145/361 (40%), Gaps = 34/361 (9%)

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N A+  ++ +L  N  P  + FG ++  L K        +    M   G+  N    N L
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 266 IDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNIL--IKGLCG-VGQLEGAEGLLQKMY 321
           I+  C+ G +  A S+ +  +   EI  D F    L   K LC  V  L   + L  K +
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +  L NV+    ++  Y K    +K L    +++ +   P ++          K G   
Sbjct: 212 LQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKIL----------KNG--- 258

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
                          PD +  T  I G    G + + L  + +++         +  +LI
Sbjct: 259 -------------YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLI 305

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +GL K G    AL    E   + DG    P+ V+Y  II  +C D  +  A  L+S+  S
Sbjct: 306 NGLCKVGETKAAL----ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVS 361

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             + PD  TY  ++ G     ++ D + L   M    I+PD     ++V G+ ++G++K 
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421

Query: 562 A 562
           A
Sbjct: 422 A 422


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 245/506 (48%), Gaps = 36/506 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+ AF+ +G I++A  V   +      P ++  N L  GL + GK D  +   +EM
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 111 VLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
              G  + DVVTY  L+D C        AL L +EM DKG++PT+V + I++  LC E K
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA      + E G+ P++ TYN L+D YCK  +V +A     EM+   L+ +  T   
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++  LCK+     A        + G  P+   Y  ++  + K  N   A+ L  +M + +
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P + TYN LIKGLC + +L+ A   L +  ++G++ +  TYN +I  YCKEGD+E A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
              ++M E   +P+VVT ++L++G C  G +D A+ L+   V K    DV+ +  LI  +
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGG 467
            K G++   L  + +M    + P  FT + ++  L + GR   A N    L  + K    
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 468 YCSP----------------------------NHVL--YAAIIQALCYDGQILKASKLFS 497
           +  P                            ++ L  Y   +  LC  GQ+ +A  +  
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKR 523
           +M    +  D  TY T++ GL++ ++
Sbjct: 760 EMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 257/542 (47%), Gaps = 16/542 (2%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLP 82
           SR P  +  +  +   SL   + +P+   F+ L+      G + +AL     ++   + P
Sbjct: 182 SRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSP 241

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
                N LLN   +KG           M   G+     TY  L+      G + +A  + 
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYNALMDGYCK 201
           + M   G EP +  Y +L  GLC   K+ EA  +   M   G  +P++ TYN L+D   K
Sbjct: 302 ESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFK 361

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + AL    EM    ++P +VT  +++  LCK G+L  A      +A+ G+ P++  
Sbjct: 362 WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LID +CKAGN+ +A +L  EM    +  D FT N ++  LC + + E AE LL    
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G + + V+Y +++  Y KE + E AL +  QM E+ + P++ T+++LI G C+   + 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+    E V K LVPD   +  +I    K+G+++   R + +M+E    P V T ++L+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 442 HGLFKNGRISNALNFF---LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +GL  +G++  AL  F   +EK  K D        + Y  +IQ++C  G +  A   F D
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDV-------ITYNTLIQSMCKVGDVDTALHFFDD 654

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L+PD  TY  +L  L  A R  +   +L  +   G +  +    ++     +  D
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEAD 714

Query: 559 LK 560
           +K
Sbjct: 715 VK 716



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 225/469 (47%), Gaps = 54/469 (11%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +L++F  +I+  + P    + +L+H  C++  + +A +   +M+  G+ P+  TYN L++
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+   +  A      M    + P   T+  L+    ++G ++ A      M  +G  P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILI----KGLCGVGQLEG 312
           ++  YN L  G C+AG + EA  L  EME+   + PDV TYN L+    K  C    L  
Sbjct: 312 DLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR- 370

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
              LL++M  +G+   +VT+N ++   CKEG +E+AL    ++ E+G+ P+V+T+++LID
Sbjct: 371 ---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 373 GQCKAGNIDAAMGLYTEMVIKSL-----------------------------------VP 397
             CKAGN+  A  L  EMV K L                                   VP
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---L 454
           D V +  ++    K+ N +  LRL+ +M+E K+ PS+ T ++LI GL +  R+  A   L
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           N F+EK          P+   Y  II A C +G +  A +  + M  ++ +PD  T  T+
Sbjct: 548 NEFVEKG-------LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + GL    ++   + L    ++ G   D +    +++   + GD+ +A 
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESM--FRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +G+ P++     ++  L      +   S+  FRS+ E  + PN YT+N L+  +C    +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL     M    L P+ VT+  L++  C+ G L  A      M + G+ P    YN L
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           +    + G + +A  +   M  +   PD+ TYN+L  GLC  G+++ A  L  +M + G 
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGT 344

Query: 326 -LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            L +VVTYN+L+D   K      AL +  +M +KGV+P +VT + ++   CK G ++ A+
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           G   ++  + L PDV+ +  LID   K GN+ +   L  EM+   +    FT++++++ L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  R  +A         +   G+  P+ V Y  ++ A   +     A +L+  M    L
Sbjct: 465 CKMKRYEDAEELLHSPPQR---GFV-PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P   TY T+++GL R +R+ + +  L + ++ G+VPD     +++  Y + GDL++AFR
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 193/395 (48%), Gaps = 8/395 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGEL--RAA 243
           P     +A +  Y ++   + A +  H +     ++P++     ++  L +      +A+
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            + F  + +  + PN + +N L+  HC  G L +A++  S M+ F +SPD  TYN L+  
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G L  A  LL +M ++GI     TYN+L+  + + G +++A  V   MT  G EP+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEM-VIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + T++ L  G C+AG +D A  L  EM  + + +PDVV +  L+D   K     + LRL 
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           +EM +  + P++ T + ++  L K G++  AL     K +K      +P+ + Y  +I A
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG----KLEKIAEEGLAPDVITYNTLIDA 428

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G + KA  L  +M    L+ D  T  T+L  L + KR  D   LL    + G VPD
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            V    ++  Y +  + + A R  + + E ++  S
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 253/522 (48%), Gaps = 14/522 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA--LWVYRKIEVLP-AIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   ++ AF E G + EA  + +  +   LP  ++  N +L   ++ G F    + ++ M
Sbjct: 5   VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 64

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+      +G L+  CC +G V +   L   M   G        T+++  LC + + 
Sbjct: 65  TRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 124

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +    FR M E G  PN+  Y A +DG CK   V +A     EM+   L+PNV T   L
Sbjct: 125 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 184

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK+G    A   F+ + K   + PN+  Y  +I G+C+ G L  A  L   M +  
Sbjct: 185 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 244

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+  TY  LI G C  G  + A  L+ KM +EG L N+ TYN++IDG+CK+G +++A 
Sbjct: 245 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 304

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V    T +G++ + +T++ LI   CK G+I  A+ L+  MV     PD+  +T+LI   
Sbjct: 305 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   M+E+ + + + L   + P+  T +S+I G  K GR + AL  F    ++     C
Sbjct: 365 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF----ERMVQNGC 420

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             + + Y A+I  LC + ++ +A  L+  M    L P   T  T+     R ++    + 
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 480

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L  + K   V       V+VR     GD+ +A   S FLK+
Sbjct: 481 VLDRLDKRQQVHTV---DVVVRKLSALGDVDAA---SLFLKK 516



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 213/491 (43%), Gaps = 54/491 (10%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE------ALWVYRKIEVLPAIQACNALL 91
           VF+ +    +   N   F  L++     G +EE      A+W Y    +  A   C  ++
Sbjct: 60  VFDGMTRAGVSPMNRG-FGALVVVCCREGKVEEVDALLAAMWRY-GFSLDNA--TCTVVV 115

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
             L +KG+F  V EF+  M+  G   +VV Y   ID  C +  V +A ++ +EM+ +G++
Sbjct: 116 RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 175

Query: 152 PTVVI------------------------------------YTILIHGLCNENKMVEAES 175
           P V                                      YT++I G C E K+  AE 
Sbjct: 176 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 235

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   M E G+ PN  TY  L+ G+CK    +RA E  ++M      PN+ T+  ++DG C
Sbjct: 236 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFC 295

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G+++ A          G+  +   Y  LI  HCK G++  A+ L   M +    PD+ 
Sbjct: 296 KKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIE 355

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            Y  LI   C   Q+E ++    K    G+L    TY S+I GYCK G    AL V  +M
Sbjct: 356 AYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 415

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + G   + +T+ +LI G CK   ++ A  LY  M+ K LVP  V    L     +    
Sbjct: 416 VQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKT 475

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              + +   + + +    V TV  ++  L   G + +A + FL+K    D    + +H  
Sbjct: 476 SIAVSVLDRLDKRQ---QVHTVDVVVRKLSALGDV-DAASLFLKKVLDED---YAVDHAT 528

Query: 476 YAAIIQALCYD 486
           Y   I + CY+
Sbjct: 529 YTGFINS-CYE 538



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 201/443 (45%), Gaps = 5/443 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G + +A ++  EM   G+   V     ++         V A  +F  M   GV P    +
Sbjct: 17  GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGF 76

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            AL+   C+   V         M  +    +  T  V++  LC+ G  +    FF  M +
Sbjct: 77  GALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 136

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN+  Y   IDG CK   + +A  +  EM    + P+V+T+  LI GLC +G  E 
Sbjct: 137 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 196

Query: 313 AEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L  K+ K      NV TY  +I GYC+EG + +A  +  +M E+G++PN  T+++LI
Sbjct: 197 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 256

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK G+ D A  L  +M  +  +P++  + A+IDG  K G ++E  ++ +      + 
Sbjct: 257 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 316

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T + LI    K G I+ AL+ F    D+     C P+   Y ++I   C   Q+ +
Sbjct: 317 FDKITYTILITEHCKQGHITYALDLF----DRMVENGCCPDIEAYTSLISTYCQQRQMEE 372

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + K F       L P   TYT+M+ G  +  R    + +   M++ G   D++    ++ 
Sbjct: 373 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 432

Query: 552 GYQENGDLKSAFRCSEFLKESRI 574
           G  +   L+ A    E + + R+
Sbjct: 433 GLCKESRLEEAKALYEGMLDKRL 455



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           KF+   ++ LI    + GHI  AL ++ R +E    P I+A  +L++   ++ + +   +
Sbjct: 316 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 375

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+++ ++ GL+    TY  +I   C  G    AL +F+ M+  G     + Y  LI GLC
Sbjct: 376 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 435

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E+++ EA++++  M +  +VP   T   L   YC+    + A+     +   + +  V 
Sbjct: 436 KESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL---DKRQQVH 492

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T  V++  L  +G++ AA  F   +       +   Y   I+  C   N +   +L SEM
Sbjct: 493 TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRY---ALASEM 548

Query: 286 -EKF 288
            EKF
Sbjct: 549 SEKF 552


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 215/425 (50%), Gaps = 10/425 (2%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G +  ALW+  K+    V+P +   N L+NGL K G  +       EM+  G   +  T+
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-- 180
              I   C   +V KAL LF  M + GI P  V Y ILIH LC +  + +A  +   +  
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264

Query: 181 RECGV-VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
            +CG    ++ T    MDG  K  D+ +AL  + EML    Q +VV + VL+ G C + +
Sbjct: 265 DDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQD 324

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           + +A  +F  M K G+ P+IF YN LI G CK GNL EA  +   M K   +PD+ +Y +
Sbjct: 325 MNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKM 384

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I+GLC  G +  A   L  M +  ++   + +N +IDG+ + GD+  ALS+  QM   G
Sbjct: 385 IIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFG 444

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + PNV T+++LI  Q K GNI  A  +  EM++  + PDVV +  LI      G +   L
Sbjct: 445 IPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFAL 504

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           RLY EML     P + T + LI G    G +  A    L K  ++     S +H  +  +
Sbjct: 505 RLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEE-LLAKLQRSG---LSIDHAPFQIL 560

Query: 480 IQALC 484
           IQ  C
Sbjct: 561 IQKYC 565



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 233/444 (52%), Gaps = 7/444 (1%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           C L  D      +I   C +G +  AL L ++MI KG+ P V+ +  L++GLC    + +
Sbjct: 125 CTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEK 184

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A+++ R M E G  PN  T+N  + GYC   +V++AL  +  M +  + PN VT+ +L+ 
Sbjct: 185 ADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIH 244

Query: 233 GLCKVGELRAAGNFFVHMAKFGV---FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            LCK G L+ A      +          +I      +DG  K G++ +A+    EM +  
Sbjct: 245 ALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG 304

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              DV  YN+LI G C +  +  A     +M+K G+L ++ TYN+LI G+CK G++++A 
Sbjct: 305 TQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEAC 364

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M++ G  P+++++  +I G C  G++  A      M+   +VP+ +++  +IDG 
Sbjct: 365 YIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGH 424

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G++   L +  +M+   I P+VFT ++LIH   K G I +A +  ++K    +G Y 
Sbjct: 425 GRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHS--IKKEMLLNGIY- 481

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  +I A C  G+I  A +L+ +M      PD  TYT ++RG      +++   
Sbjct: 482 -PDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEE 540

Query: 530 LLADMIKMGIVPDAVINQVMVRGY 553
           LLA + + G+  D    Q++++ Y
Sbjct: 541 LLAKLQRSGLSIDHAPFQILIQKY 564



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 202/369 (54%), Gaps = 7/369 (1%)

Query: 45  LEI-PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKF 100
           LEI P  N + F+T I  +    ++++AL+++  +    + P     N L++ L KKG  
Sbjct: 193 LEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLL 252

Query: 101 DSVWEFYEEMVL--CGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
               +  E+++   CG   +D++T  + +D C  +GD+++AL  +DEM+ +G +  VV Y
Sbjct: 253 KDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAY 312

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            +LIHG C    M  A   F  M + G++P+++TYN L+ G+CK+ +++ A   +  M  
Sbjct: 313 NVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSK 372

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               P+++++ +++ GLC  G++  A  F V M +  + P   ++N +IDGH + G+L  
Sbjct: 373 MGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSN 432

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+S+  +M  F I P+VFTYN LI      G +  A  + ++M   GI  +VVTYN LI 
Sbjct: 433 ALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIG 492

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
             C  G +  AL +  +M  +G EP+++T++ LI G C  G++  A  L  ++    L  
Sbjct: 493 AACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSI 552

Query: 398 DVVVFTALI 406
           D   F  LI
Sbjct: 553 DHAPFQILI 561



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 191/406 (47%), Gaps = 7/406 (1%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I  LC E K+  A  +   M + GV+P++ T+N L++G CK  D+ +A     EML   
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             PN  TF   + G C    +  A   F  MA  G+ PN   YN LI   CK G L +A 
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 280 SLCSEMEKFEI---SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            L  ++   +    + D+ T  I + G    G +  A     +M + G   +VV YN LI
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G+C   DM  A     +M ++G+ P++ T+++LI G CK GN+D A  ++  M      
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD++ +  +I GL   G++    +    MLE  + P     + +I G  ++G +SNAL+ 
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D+       PN   Y A+I A    G I+ A  +  +M  + + PD  TY  ++ 
Sbjct: 437 ----RDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIG 492

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
                 R+   + L  +M++ G  PD +    ++RG+   G +  A
Sbjct: 493 AACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEA 538



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 181/374 (48%), Gaps = 7/374 (1%)

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           A++   C    +  AL   ++M+   + P+V+T   L++GLCK G+L  A N    M + 
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  PN   +N  I G+C   N+ +A+ L S M    I P+  TYNILI  LC  G L+ A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 314 EGLLQKMYKEGI---LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             LL+K+  +      ++++T    +DG  K+GDM +AL    +M ++G + +VV ++ L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G C   ++++A   + EM  + L+PD+  +  LI G  K GN+ E   ++  M +   
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P + +   +I GL  +G +  A  F +   +        P  +++  +I      G + 
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENL----MVPEPLIWNVVIDGHGRHGDLS 431

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A  +   M S  + P+  TY  ++   ++   ++D   +  +M+  GI PD V   +++
Sbjct: 432 NALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLI 491

Query: 551 RGYQENGDLKSAFR 564
                 G +  A R
Sbjct: 492 GAACNFGRIHFALR 505



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 10/273 (3%)

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I+ LC  G+L  A  L  KM ++G++ +V+T+N L++G CK GD+EKA ++  +M E G
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             PN  TF++ I G C   N+D A+ L++ M    + P+ V +  LI  L K G +K+  
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 420 RLYKEMLE---AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           +L +++L+    K T  + T +  + G  K G +  AL  + E   +        + V Y
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG----TQIDVVAY 312

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I   C    +  A + F +M    L PD  TY T++ G  +   + +   +   M K
Sbjct: 313 NVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSK 372

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           MG  PD +  +++++G   +GD+    R ++FL
Sbjct: 373 MGAAPDLISYKMIIQGLCIHGDV---IRANQFL 402



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 5/173 (2%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKG 98
           L +L +P+  P +++ +I      G +  AL +  ++    + P +   NAL++  IK G
Sbjct: 406 LENLMVPE--PLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGG 463

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
                    +EM+L G+  DVVTY +LI   C  G +  AL L+DEM+ +G EP ++ YT
Sbjct: 464 NIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYT 523

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            LI G C    ++EAE +   ++  G+  +   +  L+  YC+     RA + 
Sbjct: 524 ELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 260/547 (47%), Gaps = 30/547 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N S F+  + +    G  E+A  V R++     +P     + +LN L    K +  + 
Sbjct: 448 KINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   GLVADV TY +++D  C  G + +A   F+EM + G  P VV YT LIH   
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML--------- 216
              K+  A  +F +M   G +PN+ TY+AL+DG+CK   V +A + +  M          
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 217 -------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                   ++ +PNVVT+G L+DG CK   +  A      M+  G  PN  VY+ LIDG 
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G L EA  + +EM +      ++TY+ LI     V + + A  +L KM +     NV
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y  +IDG CK G  ++A  +   M EKG +PNVVT++++IDG    G I+  + L   
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K + P+ V +  LID   K+G +     L +EM +            +I G  K   
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 864

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--SDNLRPD 507
            S  L   L++  + D    +P   +Y  +I  L    ++  A +L  ++   S  L   
Sbjct: 865 ESLGL---LDEIGQDDT---APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           + TY +++  L  A ++     L ++M K G++P+      +++G   N  +  A    +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978

Query: 568 FLKESRI 574
           F+    I
Sbjct: 979 FISHMEI 985



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 259/542 (47%), Gaps = 31/542 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGK------FD 101
           +P +F++L+ A+   G    A  + +K+     +P     N L+  +            D
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y EM+  G+V + +       C C  G   KA ++  EMI +G  P    Y+ ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + LCN +KM  A  +F  M+  G+V ++YTY  ++D +CK   + +A ++++EM      
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NL 275
           PNVVT+  L+    K  ++  A   F  M   G  PNI  Y+ LIDGHCKAG       +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 276 FEAMSLCSEMEKFEI----------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           FE M    ++   ++           P+V TY  L+ G C   ++E A  LL  M  EG 
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N + Y++LIDG CK G +++A  V ++M+E G    + T+SSLID   K    D A  
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+  S  P+VV++T +IDGL K G   E  +L + M E    P+V T +++I G  
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G+I       LE  ++      +PN+V Y  +I   C +G +  A  L  +M+  +  
Sbjct: 791 MIGKIETC----LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
                Y  ++ G    K  ++ + LL ++ +    P   + ++++    +   L+ A R 
Sbjct: 847 THTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904

Query: 566 SE 567
            E
Sbjct: 905 LE 906



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/562 (28%), Positives = 253/562 (45%), Gaps = 37/562 (6%)

Query: 41  ALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLI 95
           AL  +E   F P    ++ LI    E    EEA   L   R    LP +   + LL G +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            K +          M++ G       +  L+   C  GD   A  L  +M+  G  P  V
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408

Query: 156 IYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +Y ILI  +C +   +       AE  +  M   GVV N    ++     C      +A 
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM+     P+  T+  +++ LC   ++  A   F  M + G+  +++ Y  ++D  
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG + +A    +EM +   +P+V TY  LI       ++  A  L + M  EG L N+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPNVVTFSSLIDG 373
           VTY++LIDG+CK G +EKA  +  +M                 +    PNVVT+ +L+DG
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+  ++ A  L   M ++   P+ +V+ ALIDGL K G + E   +  EM E     +
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 434 VFTVSSLIHGLFKNGR---ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           ++T SSLI   FK  R    S  L+  LE +       C+PN V+Y  +I  LC  G+  
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------CAPNVVIYTEMIDGLCKVGKTD 761

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A KL   M     +P+  TYT M+ G     ++   + LL  M   G+ P+ V  +V++
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
               +NG L  A    E +K++
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQT 843



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 243/569 (42%), Gaps = 71/569 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           IA  E+G +++  + +R     P+    N L+   +K  + DS    + EM L  L  D 
Sbjct: 218 IALEELGRLKD--FRFR-----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 270

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T        C  G   +AL L +    +   P  V YT LI GLC  +   EA      
Sbjct: 271 FTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNR 327

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY+ L+ G      + R     + M+     P+   F  L+   C  G+
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDG------------------------------- 268
              A      M K G  P   VYN LI                                 
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447

Query: 269 ----------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
                      C AG   +A S+  EM      PD  TY+ ++  LC   ++E A  L +
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G++A+V TY  ++D +CK G +E+A    ++M E G  PNVVT+++LI    KA 
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT------- 431
            +  A  L+  M+ +  +P++V ++ALIDG  K G +++  ++++ M  +K         
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 432 ---------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
                    P+V T  +L+ G  K+ R+  A        D      C PN ++Y A+I  
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL----DAMSMEGCEPNQIVYDALIDG 683

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G++ +A ++ ++M          TY++++    + KR      +L+ M++    P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            VI   M+ G  + G    A++  + ++E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 200/533 (37%), Gaps = 99/533 (18%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+D      D         ++ D   E       +L+   C       A      ++
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           +    P+  TYN L+  + K   ++ A   + EM   NL+ +  T       LCKVG+ R
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V    F   P+   Y  LI G C+A    EAM   + M      P+V TY+ L+
Sbjct: 288 EALT-LVETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL------------ 349
            G     QL   + +L  M  EG   +   +NSL+  YC  GD   A             
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 350 -----------SVC------------------SQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                      S+C                  S+M   GV  N +  SS     C AG  
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 381 DAAMGLYTEMVIKSLVPD-----------------------------------VVVFTAL 405
           + A  +  EM+ +  +PD                                   V  +T +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D   K G +++  + + EM E   TP+V T ++LIH   K  ++S A   F  +T  ++
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF--ETMLSE 582

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM----------------RSDNLRPDNC 509
           G  C PN V Y+A+I   C  GQ+ KA ++F  M                  ++ RP+  
Sbjct: 583 G--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY  +L G  ++ R+ +   LL  M   G  P+ ++   ++ G  + G L  A
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 173/455 (38%), Gaps = 77/455 (16%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R+ G       YNAL+D   +  D     EF  ++   + +       VL+   C+ G  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGH------------------------------- 269
             A      +  F   P+   YNCLI                                  
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276

Query: 270 ----CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
               CK G   EA++L  E E F   PD   Y  LI GLC     E A   L +M     
Sbjct: 277 AYSLCKVGKWREALTLV-ETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           L NVVTY++L+ G   +  + +   V + M  +G  P+   F+SL+   C +G+   A  
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN------MKETLRLYKEMLEAKITPSVFTVSS 439
           L  +MV    +P  VV+  LI  +  D +      +    + Y EML A +  +   VSS
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453

Query: 440 LIHGLFKNGRISNA----------------------LNF----------FLEKTDKTDGG 467
               L   G+   A                      LN+          FL   +   GG
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             +  +  Y  ++ + C  G I +A K F++MR     P+  TYT ++   L+AK++   
Sbjct: 514 LVADVYT-YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L   M+  G +P+ V    ++ G+ + G ++ A
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 73/244 (29%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ +I    ++G  +EA  + + +E     P +    A+++G    GK ++  E  
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQG---------------------------------D 134
           E M   G+  + VTY VLID CC  G                                 +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILI--------------------------------- 161
            +++L L DE+      P + +Y +LI                                 
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922

Query: 162 ----HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
                 LC  NK+  A  +F  M + GV+P + ++ +L+ G  + + ++ AL     + H
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982

Query: 218 HNLQ 221
             +Q
Sbjct: 983 MEIQ 986


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 257/516 (49%), Gaps = 11/516 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    +   + +AL ++   ++    P ++A   L++GL K G+       +
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G+V  V+TY  +I      G +  AL + + M   G  P    Y  LI+GLC++
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 371

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EAE +  +  + G  P + T+  L++GYC     + AL   ++M+    + ++  F
Sbjct: 372 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L++ L K   L+ A      ++  G+ PN+  Y  +IDG+CK+G +  A+ +   ME+
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ +TYN L+ GL    +L  A  LL KM K+GI+ NV+TY +L+ G C E D + 
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M + G++P+   ++ L D  CKAG  + A   Y+ +V K +    V +T LID
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLID 607

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G SK GN      L + M++   TP  +T S L+H L K  R++ AL    + + +  G 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR--GI 665

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C+     Y  +I  +  +G+   A +++++M S   +P   TYT  +    +  R+ D 
Sbjct: 666 KCTI--FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             L+  M + G+ PD V   +++ G    G +  AF
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 222/452 (49%), Gaps = 8/452 (1%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y ++V  GL+ D VTY  +I   C +GD+  A   F  +++ G+EP       L+ G C 
Sbjct: 171 YSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCR 230

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ +A  +F  M   G   N Y+Y  L+ G C    V +AL  +  M      PNV  
Sbjct: 231 TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRA 290

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+ GLCK G +  A   F  M + GV P++  YN +I G+ K G + +A+ +   ME
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K    PD +TYN LI GLC   + E AE LL    KEG    VVT+ +LI+GYC     +
Sbjct: 351 KNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL + ++M     + ++  F  LI+   K   +  A  L  E+    LVP+V+ +T++I
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG  K G +   L + K M      P+ +T +SL++GL K+ ++  A+   L K  K DG
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA-LLTKMQK-DG 527

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN + Y  ++Q  C +     A +LF  M  + L+PD   Y  +   L +A R  +
Sbjct: 528 --IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
               +   ++ G+    V    ++ G+ + G+
Sbjct: 586 AYSFI---VRKGVALTKVYYTTLIDGFSKAGN 614



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 237/489 (48%), Gaps = 11/489 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I ++ + G +  A   +R +    + P    CNAL+ G  + G+       +  M
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            L G   +  +Y +LI   C    V KAL LF  M   G  P V  +T LI GLC   ++
Sbjct: 245 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F +M + GVVP++ TYNA++ GY K+  +N AL+    M  +   P+  T+  L
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   +   A     +  K G  P +  +  LI+G+C A    +A+ + ++M   + 
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  +  LI  L    +L+ A+ LL ++   G++ NV+TY S+IDGYCK G ++ AL 
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G +PN  T++SL+ G  K   +  AM L T+M    ++P+V+ +T L+ G  
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
            + +     RL++ M +  + P     + L   L K GR   A +F + K         +
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG-------VA 596

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
              V Y  +I      G    A+ L   M  +   PD+ TY+ +L  L + KR+ + + +
Sbjct: 597 LTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPI 656

Query: 531 LADMIKMGI 539
           L  M   GI
Sbjct: 657 LDQMSLRGI 665



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 239/515 (46%), Gaps = 31/515 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN+     F P+V  F+ LI  +      ++AL +  K+   +    +Q    L+N LIK
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           K +     E   E+   GLV +V+TY  +ID  C  G V  AL +   M   G +P    
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L++GL  + K+ +A ++   M++ G++PN+ TY  L+ G C   D + A   +  M 
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + L+P+   + VL D LCK G    A +F V   + GV      Y  LIDG  KAGN  
Sbjct: 560 QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTD 616

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A +L   M     +PD +TY++L+  LC   +L  A  +L +M   GI   +  Y  LI
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D   +EG  + A  + ++MT  G +P+  T++  I+  CK G ++ A  L  +M  + + 
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDVV +  LIDG    G +       K M+ A   P+ +T   L+  L K        N 
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG-------NL 789

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
              ++  T G        ++  I   + +        +L   M    L P   TY++++ 
Sbjct: 790 AYVRSVDTSG--------MWNLIELDITW--------QLLERMVKHGLNPTVTTYSSLIA 833

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           G  +A R+ +  +LL  M   G+ P+  I  ++++
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 197/395 (49%), Gaps = 5/395 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G++P+  TYN ++  YCK  D+  A  ++  +L   L+P   T   L+ G C+ GELR A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F+ M   G   N + Y  LI G C A  + +A+ L   M++   SP+V  +  LI G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G++  A  L   M + G++ +V+TYN++I GY K G M  AL +   M + G  P+
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             T+++LI G C     + A  L    V +   P VV FT LI+G        + LR+  
Sbjct: 358 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+ +K    +     LI+ L K  R+  A        ++       PN + Y +II   
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL----NEISANGLVPNVITYTSIIDGY 472

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G++  A ++   M  D  +P+  TY +++ GL++ K++   M LL  M K GI+P+ 
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           +    +++G  +  D  +AFR  E ++++ +   E
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 230/528 (43%), Gaps = 31/528 (5%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +      P+V  ++++I  + + G ++ AL V + +E     P     N+L+ GL+K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K         +M   G++ +V+TY  L+   C + D   A  LF+ M   G++P    
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +L   LC   +  EA S    +R+ GV      Y  L+DG+ K  + + A      M+
Sbjct: 570 YAVLTDALCKAGRAEEAYSFI--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P+  T+ VL+  LCK   L  A      M+  G+   IF Y  LID   + G   
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  + +EM      P   TY + I   C  G+LE AE L+ KM +EG+  +VVTYN LI
Sbjct: 687 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG    G +++A S   +M     EPN  T+  L+    K GN+     + T  +   + 
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIE 805

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D+                  T +L + M++  + P+V T SSLI G  K GR+  A   
Sbjct: 806 LDI------------------TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D   G   SPN  +Y  +I+  C      KA    S M     +P   +Y  ++ 
Sbjct: 848 L----DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 903

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           GL        V  L  D++++G   D V  +++  G  + G +   F+
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 951



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 197/445 (44%), Gaps = 24/445 (5%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VL 81
           L+K +K H     +        IP  N   ++TL+    +    + A  ++  +E   + 
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIP--NVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   A   L + L K G+ +  + F   +V  G+    V Y  LID     G+   A  L
Sbjct: 565 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + MID+G  P    Y++L+H LC + ++ EA  +   M   G+   ++ Y  L+D   +
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + A   Y+EM     +P+  T+ V ++  CK G L  A +  + M + GV P++  
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK----------------GLC 305
           YN LIDG    G +  A S    M      P+ +TY +L+K                G+ 
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            + +L+    LL++M K G+   V TY+SLI G+CK G +E+A  +   M  KG+ PN  
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            ++ LI   C     + A+   + M      P +  +  L+ GL  +G+ ++   L+ ++
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRI 450
           LE            L  GL K G +
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAGYV 946



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 182/410 (44%), Gaps = 22/410 (5%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEAL-WVYRKIEV 80
            LL+ +   H   + F     +E     P    ++ L  A  + G  EEA  ++ RK   
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVA 596

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L  +     L++G  K G  D      E M+  G   D  TY VL+   C Q  + +AL 
Sbjct: 597 LTKVYY-TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D+M  +GI+ T+  YTILI  +  E K   A+ M+  M   G  P+  TY   ++ YC
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A +   +M    + P+VVT+ +L+DG   +G +  A +    M      PN +
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 261 VYNCLIDGHCKAGNLFEAMS-----------------LCSEMEKFEISPDVFTYNILIKG 303
            Y CL+  H   GNL    S                 L   M K  ++P V TY+ LI G
Sbjct: 776 TY-CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 834

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G+LE A  LL  M  +G+  N   Y  LI   C     EKALS  S M+E G +P 
Sbjct: 835 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 894

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           + ++  L+ G C  G+ +    L+ +++      D V +  L DGL K G
Sbjct: 895 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 7/278 (2%)

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +SP    YN  ++ L      E    +  ++ ++G+L + VTYN++I  YCKEGD+ 
Sbjct: 143 RLALSPKC--YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLT 200

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A      + E G+EP   T ++L+ G C+ G +  A  L+  M +     +   +T LI
Sbjct: 201 TAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 260

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL     +++ L L+  M     +P+V   + LI GL K+GR+ +A   F    D    
Sbjct: 261 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQ 316

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ + Y A+I      G++  A K+   M  +   PD+ TY T++ GL   K   +
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTE-E 375

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              LL + +K G  P  V    ++ GY        A R
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 16/267 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+       +N   K+G+ +   +   +M   G+  DVVTY +LID C   G + +A + 
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN----KMVEAESMF------------RSMRECGV 185
              M+    EP    Y +L+  L   N    + V+   M+              M + G+
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P + TY++L+ G+CK   +  A      M    L PN   + +L+   C       A +
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           F   M++ G  P +  Y  L+ G C  G+  +  SL  ++ +   + D   + IL  GL 
Sbjct: 882 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLL 941

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTY 332
             G ++    +L  M K     +  TY
Sbjct: 942 KAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 21/284 (7%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--- 79
           + +L+  K  H    ++N + S    K + + ++  I ++ + G +E+A  +  K+E   
Sbjct: 677 DEMLREGKHDHA-KRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC----------- 128
           V P +   N L++G    G  D  +   + MV      +  TY +L+             
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 129 --CCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
               G  ++++      L + M+  G+ PTV  Y+ LI G C   ++ EA  +   M   
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ PN   Y  L+   C      +AL F   M     QP + ++ +L+ GLC  G+    
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            + F  + + G   +   +  L DG  KAG +     + S MEK
Sbjct: 915 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 958


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/621 (27%), Positives = 284/621 (45%), Gaps = 81/621 (13%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           ++LA   L   A+ +I  V   +  SR  H V +   N        + + S+ +TL+  F
Sbjct: 163 HILAAESLQLLAQDVISWVIRRIGASRSAHLVEFMWANHHKY----ESDFSILNTLMRGF 218

Query: 63  --SEMGHIE-EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF------------- 106
             SEM +   E L   R++ V P+  A + L   L++ G + SVW+              
Sbjct: 219 MNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCN 278

Query: 107 --YEEMVLC----GLV----------------ADVVTYGVLIDCCCGQGDVMKALNLFDE 144
             +  M+LC    G +                 DV  Y +LI+    +G    AL     
Sbjct: 279 HNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHL 338

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI  G +P+++ ++ +I   CNE  +VEA  +F  ++E G+ PN+  YN LM GY K  D
Sbjct: 339 MIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARD 398

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V +A   Y EM    + P+  TF +L+ G  K G+   +   F   +   + P+  +Y+ 
Sbjct: 399 VCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDV 458

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK---------------------- 302
            + G C AG L EAM    +M +  + P V  +N +I                       
Sbjct: 459 SVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFG 518

Query: 303 -------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
                        GL   G+L+ A  LL KM  +G+  N V +  L+DGY K GD   A 
Sbjct: 519 LVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAH 578

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S+  +M  +G+ P+ + FS+ IDG  KAG ++ A   ++EM  K  VP+  V+ +LI GL
Sbjct: 579 SLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGL 638

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G + E L+L +EM +  + P +FT + +I+G  K GR+ +A + F E          
Sbjct: 639 CNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIG----V 694

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           +P+ V Y  +I   C    ++ A +  + M +    PD  TY   ++G   ++++   + 
Sbjct: 695 TPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVT 754

Query: 530 LLADMIKMGIVPDAVINQVMV 550
           +L ++I +G+VP+ V    M+
Sbjct: 755 MLDELIAVGVVPNTVTYNTMM 775



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 239/505 (47%), Gaps = 7/505 (1%)

Query: 60  IAFSEMGHIEEALWV-YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           I  S   H+ E +W  + K E   +I   N L+ G +         E    M   G+   
Sbjct: 185 IGASRSAHLVEFMWANHHKYESDFSI--LNTLMRGFMNSEMAYESLEILSRMREVGVRPS 242

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
                +L       GD      L   MI  G  P    + I+I   C +  +  AES+  
Sbjct: 243 SSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLF 302

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M +    P++Y YN L++ Y      + AL F H M+ +  +P+++TF  ++   C  G
Sbjct: 303 VMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEG 362

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A   F  + + G+ PN+ +YN L+ G+ KA ++ +A  L  EM    I+PD  T+N
Sbjct: 363 NVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFN 422

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           IL+ G    G+   +  L +      ++ +   Y+  + G C  G +++A+     M EK
Sbjct: 423 ILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEK 482

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+VV F+S+I    +AG  D A   Y  M++  LVP     ++++ GLSK G ++E 
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEA 542

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L  +M++  +  +    + L+ G FK G  + A + + E   +   G C P+ + ++A
Sbjct: 543 RDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEAR---GIC-PDAIAFSA 598

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            I  L   G + +A + FS+M      P+N  Y +++ GL    ++ + + L  +M + G
Sbjct: 599 FIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKG 658

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           ++PD     +++ G+ + G +KSAF
Sbjct: 659 LLPDIFTTNIIINGFCKEGRMKSAF 683



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 222/459 (48%), Gaps = 12/459 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N ++++TL+  + +   + +A  +Y ++    + P     N L+ G  K GK    +E +
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +  L  LV D   Y V +   C  G + +A+   ++M++KG+ P+VV +  +I      
Sbjct: 442 RDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRA 501

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
                A   ++ M   G+VP+  T ++++ G  K   +  A +  ++M+   L  N V F
Sbjct: 502 GFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAF 561

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+DG  KVG+   A + +  M   G+ P+   ++  IDG  KAG + EA    SEM K
Sbjct: 562 TVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK 621

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ F YN LI GLC  G+L  A  L ++M ++G+L ++ T N +I+G+CKEG M+ 
Sbjct: 622 KGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKS 681

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M   GV P+ VT+++LI G CK  ++ +A     +M      PD+  +   I 
Sbjct: 682 AFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQ 741

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G      +   + +  E++   + P+  T ++++     N   ++ L+  +  T K    
Sbjct: 742 GFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMM-----NAVCTDMLDRAMVLTAKLLKM 796

Query: 468 YCSPNHVLYAAIIQALCYDGQILKA----SKLFSDMRSD 502
              PN V    ++   C  G   KA     KL   +R+D
Sbjct: 797 AFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLNKLLRAD 835


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 223/401 (55%), Gaps = 4/401 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           + + +++G  K G+     +  +EM   G+  + + Y  L+D    + D  +   +   M
Sbjct: 69  SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 128

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GIEPTV  YTIL+ GL     + + E++F  M+   +  ++Y Y+++++ YC+  +V
Sbjct: 129 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 188

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA E + E + + ++PN  T+G L++G CK+G++ AA      M   GV  N  V+N +
Sbjct: 189 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 248

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+   + +A+ +   MEK  I  DV+TYN L  GL    +++ A+ LL+ M ++G+
Sbjct: 249 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 308

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N V+Y +LI  +C EGDM +A  +  +M   G EP++VT++ ++DG  K G+I  A  
Sbjct: 309 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 368

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K LVPD+  + AL+ G   +G +   LRL++EM +    P++   ++LI GL 
Sbjct: 369 FKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 428

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           K GR   A   +    D   G   +P+  LY+A++ +L  D
Sbjct: 429 KEGRSEEAFQLY----DNMLGDGLTPDDALYSALVGSLHTD 465



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 201/393 (51%), Gaps = 4/393 (1%)

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           ++++ G C   ++  A  +   M   GV  N   YN+L+D Y +  D +R  E    M +
Sbjct: 71  SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++P V T+ +L+DGL    ++      F  M    +  +++ Y+ +I+ +C+AGN+  
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  E     I P+  TY  LI G C +GQ+E AE L+  M   G+  N + +N++ID
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           GYC++  ++KAL +   M + G+E +V T+++L  G  +A  +D A  L   M+ K + P
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + V +T LI     +G+M E  RL++EM      PS+ T + ++ G  K G I  A  F 
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 370

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   K       P+   YAA++   C +G++  A +LF +M+    +P+   YT ++ G
Sbjct: 371 NEMEKKG----LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 426

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           L +  R  +   L  +M+  G+ PD  +   +V
Sbjct: 427 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 5/427 (1%)

Query: 98  GKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           G  D+  +  ++    C      ++  V++D  C  G V  A  L DEM   G++   + 
Sbjct: 45  GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 104

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L+     E        M + M   G+ P + TY  L+DG     D+ +    + EM 
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             NL  +V  +  +++  C+ G +R A   F      G+ PN   Y  LI+G CK G + 
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 224

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L ++M+   +  +   +N +I G C    ++ A  +   M K GI  +V TYN+L 
Sbjct: 225 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 284

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G  +   M++A ++   M EKGV PN V++++LI   C  G++  A  L+ EM      
Sbjct: 285 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 344

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V +  ++DG  K G+++E  R   EM +  + P +++ ++L+HG   NG++  AL  
Sbjct: 345 PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRL 404

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E   +       PN V Y A+I  L  +G+  +A +L+ +M  D L PD+  Y+ ++ 
Sbjct: 405 FEEMKQRG----SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 460

Query: 517 GLLRAKR 523
            L   K+
Sbjct: 461 SLHTDKK 467



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 7/353 (1%)

Query: 222 PNVVT---FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           P+ VT     V++DG CK G +  A      M + GV  N   YN L+D + +  +    
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             +   ME   I P V TY IL+ GL     +   E + ++M  + +  +V  Y+S+I+ 
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 181

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YC+ G++ +A  V  +    G+EPN  T+ +LI+G CK G ++AA  L T+M ++ +  +
Sbjct: 182 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 241

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
            +VF  +IDG  +   + + L +   M +  I   V+T ++L  GL +  R+  A N   
Sbjct: 242 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 301

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
              +K       PNHV Y  +I   C +G +++A +LF +M  +   P   TY  M+ G 
Sbjct: 302 IMIEKG----VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 357

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           ++   + +      +M K G+VPD      +V G+  NG +  A R  E +K+
Sbjct: 358 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 410



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 20  DVTENLL-----KSRKPHHVCYSVF-----NALNSLEIPKF---------NPSV--FSTL 58
           D  +NLL     K  +P+HV Y+       N  + +E  +           PS+  ++ +
Sbjct: 294 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 353

Query: 59  IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           +  + + G I EA     ++E   ++P I +  AL++G    GK D     +EEM   G 
Sbjct: 354 MDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 413

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
             ++V Y  LI     +G   +A  L+D M+  G+ P   +Y+ L+  L  + K
Sbjct: 414 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 467


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 263/530 (49%), Gaps = 9/530 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I+AF + G++EEA+ V  ++    +  ++ A  +L+NG  K  +     + +  M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D V + V+++  C   ++ KA+  +  M    I P+ V+   +I G       
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F    E  +    +  N +   +CK   V+ A  F   M    ++PNVV +  +
Sbjct: 432 EAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M   C++  +  A + F  M + G+ PN F Y+ LIDG  K  +   A  + ++M     
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKAL 349
             +   YN +I GLC VGQ   A+ +LQ + KE   + +  +YNS+IDG+ K GD + A+
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               +M+E G  PNVVTF+SLI+G CK+  +D A+ +  EM    L  D+  + ALIDG 
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K  +MK    L+ E+ E  + P+V   +SLI G    G++  A++ +  K    DG  C
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY--KKMVNDGISC 728

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             +   Y  +I  L  DG I  AS L+S++    + PD   +  ++ GL +  + L    
Sbjct: 729 --DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           +L +M K  + P+ ++   ++ G+   G+L  AFR  + + E  I   +T
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 39/496 (7%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+ A   TY  +I     +G++ +A+ + DEM+  GI  +V+  T L++G C  N++ +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M E G+ P+   ++ +++ +CK  ++ +A+EFY  M    + P+ V    ++ G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424

Query: 234 ----------------------------------LCKVGELRAAGNFFVHMAKFGVFPNI 259
                                              CK G++ AA +F   M + G+ PN+
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN ++  HC+  N+  A S+ SEM +  + P+ FTY+ILI G       + A  ++ +
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDGQCKAG 378
           M      AN V YN++I+G CK G   KA  +   +  EK    +  +++S+IDG  K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           + D+A+  Y EM      P+VV FT+LI+G  K   M   L +  EM   ++   +    
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI G  K   +  A   F E  +        PN  +Y ++I      G++  A  L+  
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELG----LMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M +D +  D  TYTTM+ GLL+   +     L ++++ +GIVPD +++ V+V G  + G 
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780

Query: 559 LKSAFRCSEFLKESRI 574
              A +  E +K+  +
Sbjct: 781 FLKASKMLEEMKKKDV 796



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 223/446 (50%), Gaps = 7/446 (1%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           FY+   +     +  L+  + +  LK+  P      +FN  +S E    +  + + + + 
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPE-AALEIFN--DSFESWIAHGFMCNKIFLL 458

Query: 62  FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           F + G ++ A    + +E   + P +   N ++    +    D     + EM+  GL  +
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
             TY +LID      D   A ++ ++M     E   VIY  +I+GLC   +  +A+ M +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 179 SM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           ++ +E     +  +YN+++DG+ KV D + A+E Y EM  +   PNVVTF  L++G CK 
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
             +  A      M    +  ++  Y  LIDG CK  ++  A +L SE+ +  + P+V  Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N LI G   +G+++ A  L +KM  +GI  ++ TY ++IDG  K+G++  A  + S++ +
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G+ P+ +    L++G  K G    A  +  EM  K + P+V++++ +I G  ++GN+ E
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHG 443
             RL+ EMLE  I       + L+ G
Sbjct: 819 AFRLHDEMLEKGIVHDDTVFNLLVSG 844



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 259/552 (46%), Gaps = 41/552 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
           +  P  F+ L+ A+     ++ A     L V RK  V+P +   N +L+ L++    D  
Sbjct: 166 ELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRK--VVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            E Y +MVL G+  D VT  +L+     +    +A+ +F  ++ +G EP  +++++ +  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 164 LCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            C    +V A  + R MR + GV  +  TY +++  + K  ++  A+    EM+   +  
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +V+    L++G CK  EL  A + F  M + G+ P+  +++ +++  CK   + +A+   
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M+   I+P     + +I+G       E A  +    + E  +A+    N +   +CK+
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF-ESWIAHGFMCNKIFLLFCKQ 462

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G ++ A S    M +KG+EPNVV +++++   C+  N+D A  +++EM+ K L P+   +
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA----LNFFL 458
           + LIDG  K+ + +    +  +M  +    +    +++I+GL K G+ S A     N   
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582

Query: 459 EK---------------------TDKTDGGY-------CSPNHVLYAAIIQALCYDGQIL 490
           EK                     TD     Y        SPN V + ++I   C   ++ 
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A ++  +M+S  L+ D   Y  ++ G  +   M     L +++ ++G++P+  +   ++
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702

Query: 551 RGYQENGDLKSA 562
            G++  G + +A
Sbjct: 703 SGFRNLGKMDAA 714



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 1/290 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           N ++NGL K G+     E  + ++     +    +Y  +ID     GD   A+  + EM 
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           + G  P VV +T LI+G C  N+M  A  M   M+   +  +L  Y AL+DG+CK  D+ 
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + E+    L PNV  +  L+ G   +G++ AA + +  M   G+  ++F Y  +I
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG  K GN+  A  L SE+    I PD   + +L+ GL   GQ   A  +L++M K+ + 
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            NV+ Y+++I G+ +EG++ +A  +  +M EKG+  +   F+ L+ G+ +
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 192/440 (43%), Gaps = 7/440 (1%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           NL D     G E T   +  L++      +M  A   F  M +  VVP +   N ++   
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            +   ++ A E Y++M+   +  + VT  +LM    +  +   A   F  +   G  P+ 
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            +++  +   CK  +L  A+ L  EM  K  +     TY  +I      G +E A  ++ 
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   GI  +V+   SL++GYCK  ++ KAL + ++M E+G+ P+ V FS +++  CK  
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ++ A+  Y  M    + P  V+   +I G  K  + +  L ++ +  E+ I    F  +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCN 453

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +     K G++  A +F   K  +  G    PN V Y  ++ A C    +  A  +FS+
Sbjct: 454 KIFLLFCKQGKVDAATSFL--KMMEQKG--IEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    L P+N TY+ ++ G  + K   +   ++  M       + VI   ++ G  + G 
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569

Query: 559 LKSAFR-CSEFLKESRIGSS 577
              A       +KE R   S
Sbjct: 570 TSKAKEMLQNLIKEKRYSMS 589



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 177/390 (45%), Gaps = 10/390 (2%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++ Y +   ++ A++ +  M+   + P V     ++  L +   +  A   +  M 
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             GV  +      L+    +     EA+ +   +      PD   +++ ++  C    L 
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291

Query: 312 GAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            A  LL++M  K G+ A+  TY S+I  + KEG+ME+A+ V  +M   G+  +V+  +SL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           ++G CK   +  A+ L+  M  + L PD V+F+ +++   K+  M++ +  Y  M   +I
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK--TDGGYCSPNHVLYAAIIQALCYDGQ 488
            PS   V ++I G  K      AL  F +  +     G  C+   +L+       C  G+
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF-------CKQGK 464

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +  A+     M    + P+   Y  M+    R K M     + ++M++ G+ P+     +
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           ++ G+ +N D ++A+     +  S   ++E
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANE 554



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 3/252 (1%)

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N L++ Y +   M+ A+     M ++ V P V   ++++    ++  ID A  +Y +MV
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           +  +  D V    L+    ++   +E +++++ ++     P     S  +    K   + 
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL+   E   K        +   Y ++I A   +G + +A ++  +M    +       
Sbjct: 292 MALDLLREMRGKLG---VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAA 348

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           T+++ G  +   +   + L   M + G+ PD V+  VMV  + +N +++ A      +K 
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408

Query: 572 SRIGSSETEGHT 583
            RI  S    HT
Sbjct: 409 VRIAPSSVLVHT 420


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 284/595 (47%), Gaps = 40/595 (6%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           +VL  A+LY  A+ ++K    +L +     +  + V   +++  +   NP+VF  LI  +
Sbjct: 62  HVLVKARLYGYAKSILK----HLAQKNSGSNFLFGVL--MDTYPLCSSNPAVFDLLIRVY 115

Query: 63  SEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
              G +  A+  +  + +    P++  CN ++  ++K  +   VW F+++M+   +  +V
Sbjct: 116 LRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNV 175

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            ++ +LI   C QG + KA+N+   M   G  PT+V Y  L+   C + +   A  +   
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G+  ++ TYN  +D  C+ +   +      +M +  + PN V++  L++G  K G+
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGK 295

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A   F  M +  + PN+  YN LI+G+C  GN  EA+ +   ME  ++ P+  T   
Sbjct: 296 IGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGT 355

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ GL    + + A  +L++        N +++  +IDG C+ G +++A  +  +M + G
Sbjct: 356 LLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           V P+++TFS LI+G CK GNI+ A  + +++  +  VP+ V+F+ LI    K GN+ E +
Sbjct: 416 VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAM 475

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------DKTDGGY 468
           + Y  M         FT +SL+  L +NG++  A  F    +           D    GY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 469 CS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +                    P+   Y ++++ LC      +A KL   +    L  D 
Sbjct: 536 ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +Y T++  + ++  +L+ + L  +MI+  I+PD+     ++ G    G L  AF
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 235/497 (47%), Gaps = 3/497 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R   + P   + N L+NG +K+GK       + EM+   L  +++TY +LI+  C  G+ 
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL + D M    + P  V    L++GL    K   A ++           N  ++  +
Sbjct: 332 EEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVM 391

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG C+   ++ A +   EM    + P+++TF VL++G CKVG +  A      + + G 
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGF 451

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +++ LI   CK GN++EAM   + M     + D FT N L+  LC  G+L  AE 
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L  + + G++ N VT++ +I+GY   GD   A SV  +M   G  P+  T+ SL+   C
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLC 571

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K  N   A  L  ++    L  D + +  LI  +SK GN+ E +RL++EM++  I P  +
Sbjct: 572 KGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + ++ GL + GR+  A  F      K      + N ++Y   I  L   GQ   A  L
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKE---ILTLNSIVYTCFIDGLFKAGQSKAALYL 688

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M    L  D     ++  G  R  ++     L++      ++P+     +++ GY  
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748

Query: 556 NGDLKSAFRCSEFLKES 572
             D+ S F+    ++ S
Sbjct: 749 GQDIMSCFKLYNLMRRS 765



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 248/519 (47%), Gaps = 13/519 (2%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNAL 90
           V   VFN +  L +   N   ++ LI  +   G+ EEAL V   +E   V P       L
Sbjct: 298 VATRVFNEMIELNLSP-NLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTL 356

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LNGL K  KFD      E   +     + +++ V+ID  C  G + +A  L  EM   G+
Sbjct: 357 LNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGV 416

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P ++ +++LI+G C    + +A+ +   +   G VPN   ++ L+   CKV +V  A++
Sbjct: 417 HPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMK 476

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY  M  +    +  T   L+  LC+ G+L  A  F  H+++ G+ PN   ++C+I+G+ 
Sbjct: 477 FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G+   A S+   M      P  FTY  L+K LC       A  LL+K++   +  + +
Sbjct: 537 NVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTI 596

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +YN+LI    K G++ +A+ +  +M +  + P+  T++ ++ G  + G +  A      +
Sbjct: 597 SYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRL 656

Query: 391 VIKSLVP-DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           + K ++  + +V+T  IDGL K G  K  L L+KEM E  ++  +  ++S+  G  + G+
Sbjct: 657 MQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGK 716

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           + +A +       KT      PN   +  ++        I+   KL++ MR     P+  
Sbjct: 717 VFSASSLI----SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRL 772

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           TY +++ GL        ++ L   M+KM I   + I+ +
Sbjct: 773 TYHSLILGLCNH----GMLELGIKMLKMFIAESSTIDDL 807



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 230/564 (40%), Gaps = 80/564 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEF 106
           N  +FSTLI    ++G++ EA+  Y  +  L    A    CN+L+  L + GK     EF
Sbjct: 454 NNVIFSTLIYNSCKVGNVYEAMKFYAAMN-LNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   GLV + VT+  +I+     GD   A ++FD MI  G  P+   Y  L+  LC 
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCK 572

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP---- 222
                EA  + + +    +  +  +YN L+    K  ++  A+  + EM+ +N+ P    
Sbjct: 573 GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632

Query: 223 --------------------------------NVVTFGVLMDGLCKVGELRAAGNFFVHM 250
                                           N + +   +DGL K G+ +AA   F  M
Sbjct: 633 YTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G+  ++   N + DG+ + G +F A SL S+     + P++ T+NIL+ G      +
Sbjct: 693 EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                L   M + G   N +TY+SLI G C  G +E  + +      +    + +TF+ L
Sbjct: 753 MSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNML 812

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   C+  ++D  + L   M          VF   +D        K+T +   ++L  ++
Sbjct: 813 IRKCCEINDLDKVIDLTHNM---------EVFRVSLD--------KDTQKAVTDVLVRRM 855

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
               + V   +H + K G I                    P    Y  +++ +C  G I 
Sbjct: 856 VSQNYFV--FMHEMLKKGFI--------------------PTSKQYCTMMKRMCRVGDIQ 893

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A KL   M +  +  D+     M+RGL    ++ + M +L  M++M  +P       ++
Sbjct: 894 GAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLM 953

Query: 551 RGYQENGDLKSAFRCSEFLKESRI 574
             + +  + K A      ++  R+
Sbjct: 954 HVFCKKDNFKEAHNLKILMEHYRV 977



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 222/529 (41%), Gaps = 43/529 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F  +I  ++ +G    A  V+ ++      P+     +LL  L K   F    +  
Sbjct: 524  NSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL 583

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +++    L  D ++Y  LI      G++++A+ LF+EMI   I P    YT ++ GL  E
Sbjct: 584  KKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE 643

Query: 168  NKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++V A     R M++  +  N   Y   +DG  K      AL  + EM    L  +++ 
Sbjct: 644  GRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
               + DG  ++G++ +A +         V PN+  +N L+ G+ +  ++     L + M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            +    P+  TY+ LI GLC  G LE    +L+    E    + +T+N LI   C+  D++
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 347  KALSVCS-----------------------------------QMTEKGVEPNVVTFSSLI 371
            K + +                                     +M +KG  P    + +++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
               C+ G+I  A  L  +MV   +  D     A++ GL+  G ++E + + + ML  K  
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P+  T ++L+H   K      A N  +      +      + V Y  +I A C +G ++ 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKI----LMEHYRVKLDIVAYNVLISACCANGDVIT 999

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A   + +++   L P+  TY  ++  +     +    ++L D+   G+V
Sbjct: 1000 ALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/445 (20%), Positives = 171/445 (38%), Gaps = 85/445 (19%)

Query: 29   RKPHHVCYSVF-NALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAI 84
            R+   VC  +F   L   EI   N  V++  I    + G  + AL++++++E   +   +
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 85   QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
             A N++ +G  + GK  S      +     ++ ++ T+ +L+       D+M    L++ 
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 145  MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS-MRECGVVPNLYTYNALMDGYCKVA 203
            M   G  P  + Y  LI GLCN   +     M +  + E   + +L T+N L+   C++ 
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL-TFNMLIRKCCEIN 820

Query: 204  DVNRALE-----------------------------------FYHEMLHHNLQPNVVTFG 228
            D+++ ++                                   F HEML     P    + 
Sbjct: 821  DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880

Query: 229  VLMDGLCKVGELRAAGNFFVHMAKFGV--------------------------------- 255
             +M  +C+VG+++ A      M   G+                                 
Sbjct: 881  TMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRM 940

Query: 256  --FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
               P    +  L+   CK  N  EA +L   ME + +  D+  YN+LI   C  G +  A
Sbjct: 941  KKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA 1000

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
                +++ ++G+L N+ TY  L+     +  + +   V   + ++G+       S  +DG
Sbjct: 1001 LDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL------VSGYLDG 1054

Query: 374  QCKAGNIDAAMGLYTEMVIKSLVPD 398
            + +    D  + +     + SL P+
Sbjct: 1055 KSQKSCRDFVVAIKK---LNSLKPN 1076



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 115/253 (45%), Gaps = 6/253 (2%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +N   ++ LI  Y ++G +  A++  S M  +G +P+V T + ++    K          
Sbjct: 103 SNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 162

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + +M+   + P+V  F  LI  L   G +K+ + +   M      P++ + ++L+    K
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 447 NGRISNALNFFLEKTDK-TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            GR   AL        K      C+     Y   I +LC + +  +   +   MR+  + 
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCT-----YNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  +Y T++ G ++  ++     +  +MI++ + P+ +   +++ GY  NG+ + A R 
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRV 337

Query: 566 SEFLKESRIGSSE 578
            + ++ + +  +E
Sbjct: 338 LDVMEANDVRPNE 350



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 4/183 (2%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           VF  LI    + G +   +  +  ML     PSV+T + ++  + KN R     +FF + 
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                     PN   +  +I  LC  G++ KA  + + M  +   P   +Y T+L    +
Sbjct: 167 LTSR----VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             R    ++L+  M   GI  D     + +     N      +   + ++   I  +E  
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 581 GHT 583
            +T
Sbjct: 283 YNT 285


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 253/522 (48%), Gaps = 10/522 (1%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           + F  L  LE     P+V  ++ L+ A    G +EEA  +  ++    + P+I     L+
Sbjct: 234 AAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILI 293

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL +  +F  V    +EM   G+  + V Y  LI   C +G   +AL LFDEM+ KGI+
Sbjct: 294 NGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIK 353

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK-VADVNRALE 210
            TVV Y ++   LC E +M  AE +   M   G+  +   +N+++  + +    ++  L 
Sbjct: 354 QTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLR 413

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EM+   L+PN       +  LCK G+   A   +  +   G+  NI   N LI G C
Sbjct: 414 LIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLC 473

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           +  N+ EA  +   M    +  D  TYNI+I+  C   ++E A  L   M K G   ++ 
Sbjct: 474 QGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLF 533

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N+ +  YC  G +E  L +  QM  +G++P++VT+ ++IDG CKA ++  A     E+
Sbjct: 534 TFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL 593

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   L P+ V++ ALI G  ++G++ + + +   M    I P+  T +SL++ +   G +
Sbjct: 594 IKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLV 653

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A   F +   K          + Y  IIQ  C  G+I +A   F +M   ++RP+  T
Sbjct: 654 EEAKEIFAQCILKN----IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMT 709

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           YTT++    +     +   L  +M+  GIVPD V    ++ G
Sbjct: 710 YTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG 751



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 236/481 (49%), Gaps = 10/481 (2%)

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDC--CCGQGDVMKALNLFDEMID-KGIEPTV 154
           G      + + E+   G    + T  +L++   C GQ D+  A  +F EM D   + P V
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDL--ARKVFGEMRDGNAVAPDV 216

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             YT++I  LC   ++  A  M   +   G+ P + TYN LMD  C+   V  A +    
Sbjct: 217 YTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGR 276

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+   L+P++VTFG+L++GL +             M  FG+ PN  +YN LI  HC+ G+
Sbjct: 277 MVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGH 336

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             EA+ L  EM    I   V TYN++ K LC  G++E AE +L +M   G+  +   +NS
Sbjct: 337 CSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNS 396

Query: 335 LIDGYCK-EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++  + +  G ++  L +  +M  + ++PN    ++ I   CK G  + A  ++  ++ K
Sbjct: 397 VVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGK 456

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L  ++    ALI GL +  NMKE  ++ K M+++ +     T + +I    K  ++  A
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           +     + D    G+  P+   +   ++A C  G++     L   M+S+ L+PD  TY T
Sbjct: 517 IQL---RDDMIKRGF-KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++ G  +AK +      L ++IK G+ P+AVI   ++ GY  NG +  A    + +K + 
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNG 632

Query: 574 I 574
           I
Sbjct: 633 I 633



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 245/521 (47%), Gaps = 40/521 (7%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +     ++  L + G+ D+ +    E+   G+   VVTY VL+D  C  G V +A 
Sbjct: 212 VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAF 271

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M++  + P++V + ILI+GL    +  E +++ + M   G+ PN   YN L+  +
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH 331

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+    + AL  + EM+   ++  VVT+ ++   LCK GE+  A      M   G+  + 
Sbjct: 332 CREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC 391

Query: 260 FVYNCLIDGHCKA-GNLFEAMSLCSEMEKFEISPD------------------------- 293
            ++N ++  H +  G L   + L  EM    + P+                         
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWF 451

Query: 294 ----------VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
                     + T N LI GLC    ++ A  +L+ M   G+  + +TYN +I   CK  
Sbjct: 452 LVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKAS 511

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ME+A+ +   M ++G +P++ TF++ +   C  G ++  + L  +M  + L PD+V + 
Sbjct: 512 KMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYG 571

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +IDG  K  ++ +  +   E+++  + P+    ++LI G  +NG IS+A+      T K
Sbjct: 572 TIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVL--DTMK 629

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            +G    P  + Y +++  +C+ G + +A ++F+     N+      YT +++G  +  +
Sbjct: 630 HNG--IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGK 687

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + + +M   +M    I P+ +    ++  Y + G+ + AF+
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFK 728



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 177/338 (52%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            A +  L K+GK +   E +  ++  GL  ++ T   LI   C   ++ +A  +   M+D
Sbjct: 431 TACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVD 490

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+E   + Y I+I   C  +KM EA  +   M + G  P+L+T+N  +  YC +  V  
Sbjct: 491 SGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVED 550

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            L    +M    L+P++VT+G ++DG CK  ++  A  + + + K G+ PN  +YN LI 
Sbjct: 551 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIG 610

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+ + G++ +A+ +   M+   I P   TYN L+  +C  G +E A+ +  +   + I  
Sbjct: 611 GYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIEL 670

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V+ Y  +I G+CK G +++A+    +M  + + PN +T+++L+   CK GN + A  L+
Sbjct: 671 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLF 730

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            EMV   +VPD V +  LI G  +  ++ + +    EM
Sbjct: 731 DEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 208/438 (47%), Gaps = 8/438 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI      GH  EAL ++ ++    +   +   N +   L K+G+ +   +  
Sbjct: 320 NEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQIL 379

Query: 108 EEMVLCGLVADVVTYGVLIDCCC-GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +EM+L G+      +  ++     G G +   L L  EM+ + ++P   + T  I  LC 
Sbjct: 380 DEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCK 439

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  EA  ++  +   G+  N+ T NAL+ G C+  ++  A +    M+   ++ + +T
Sbjct: 440 RGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRIT 499

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++   CK  ++  A      M K G  P++F +N  +  +C  G + + + L  +M+
Sbjct: 500 YNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMK 559

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+ TY  +I G C    +  A   L ++ K G+  N V YN+LI GY + G + 
Sbjct: 560 SEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSIS 619

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A+ V   M   G++P  +T++SL+   C AG ++ A  ++ + ++K++   V+ +T +I
Sbjct: 620 DAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIII 679

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G + E +  +KEM    I P+  T ++L++   K G    A   F    D+   
Sbjct: 680 QGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLF----DEMVS 735

Query: 467 GYCSPNHVLYAAIIQALC 484
               P+ V Y  +I   C
Sbjct: 736 SGIVPDTVSYNTLISGCC 753



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 176/345 (51%), Gaps = 3/345 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA--LWVYRKIEVLPA-IQACNALLNGLIKKGKFDSVWE 105
           K N +V +  I    + G  EEA  +W     + L   I   NAL++GL +        +
Sbjct: 424 KPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATK 483

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + MV  G+  D +TY ++I  CC    + +A+ L D+MI +G +P +  +   +   C
Sbjct: 484 VLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC 543

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N  K+ +   +   M+  G+ P++ TY  ++DGYCK  DV++A ++  E++ + L+PN V
Sbjct: 544 NLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAV 603

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+ G  + G +  A      M   G+ P    YN L+   C AG + EA  + ++ 
Sbjct: 604 IYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC 663

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I   V  Y I+I+G C +G+++ A    ++M+   I  N +TY +L+  YCK G+ 
Sbjct: 664 ILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNK 723

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           E+A  +  +M   G+ P+ V++++LI G C+  ++D  +    EM
Sbjct: 724 EEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRP 506
           G +S A + FLE + +      SP+      +++AL   GQ+  A K+F +MR  N + P
Sbjct: 159 GSLSCAADAFLELSTRG----ASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAP 214

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  TYT M++ L RA  +    ++LA++ + GI P  V   V++     +G ++ AF+  
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274

Query: 567 EFLKESRIGSS 577
             + E R+  S
Sbjct: 275 GRMVEGRLRPS 285


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/656 (27%), Positives = 281/656 (42%), Gaps = 139/656 (21%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           FS+L+    +   +EEA+ + + +  +P +   N+L+NGL +  + D  +E ++ M   G
Sbjct: 281 FSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG 340

Query: 115 LVADVVTYGVL------------------------------------IDCCCGQGDVMKA 138
             ADV+TY +L                                    I   C  G V +A
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400

Query: 139 LNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE--------------- 182
             +++ M+  +GI P    Y  L+ GLC        E  F  M E               
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE 460

Query: 183 --------CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
                   C   P L TYN L+ G  K   V  AL     M+   L P+V+TF  ++DGL
Sbjct: 461 VDFLMVQVCR--PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK   +  A N F    + G  PN+  Y+ LIDG  K   + EA+ L ++M +     + 
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY--------------- 339
            TY+ ++ GL  VG++E A  +L++M   G L + VTYN+LIDG+               
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 340 --------------------CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
                               C+ G  ++A+ +   M  +G  PN +T+SS++DG CKAG 
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 380 IDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           +  A+G + +M    +V P V+ ++ALIDGL K G + E     + M+ A   P V T S
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758

Query: 439 SLIHGLFKNGRISNALNFF---LEKTDKTD--------GGYC------------------ 469
            LI+GL   GRI   L  F    E+  K D          YC                  
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818

Query: 470 --SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             + N V +  +I+ALC + +I +A   F  +  D    D  +Y T++  L+ ++R    
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQA 876

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           + LL  M+  G  PDA     ++ G  + G  + A   ++ L+E R     + GH+
Sbjct: 877 LELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA---AKLLQEMR-----SRGHS 924



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 264/560 (47%), Gaps = 33/560 (5%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAI 84
           K   VC   F A        F P+V  +ST+I        +++   +  ++      P  
Sbjct: 13  KAGRVC-DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNA 71

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              N L+N L+ +G+    +   E M   G   +++T+G++I   C +G++  A  + DE
Sbjct: 72  VTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDE 131

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+D+G  P V I+T+L+H LC   ++ EA   F+ +   G  P+  TYN ++DG  K   
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGR 191

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +  A      +      P V TF + +DGL K G L  A  FF  M + GV PN   Y+ 
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDA 251

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG CKAG L  A+ L  +         +F ++ L+ GLC   +LE A  LL+ M    
Sbjct: 252 LIDGLCKAGKLDIALGLLRDKNS---QAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---P 305

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + NVV +NSL++G C+   +++A  +   M E G   +V+T++ L+ G CK   I  A 
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 385 GLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLI 441
             + E++ ++    P+VV F+ LI GL   G + +   +Y+ M+  + I+P+ FT + L+
Sbjct: 366 -RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424

Query: 442 HGLFKNG---RISNALNFFLEKTDKTDGGY--------------CSPNHVLYAAIIQALC 484
            GL K G   R+       LE+  ++   +              C P  V Y  ++  L 
Sbjct: 425 EGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLS 484

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G +  A  L   M    L PD  T+ ++L GL + +R+LD   +    ++ G  P+ V
Sbjct: 485 KSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 544

Query: 545 INQVMVRGYQENGDLKSAFR 564
               ++ G  +   +  A +
Sbjct: 545 TYSTLIDGLSKMAKMDEALQ 564



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 252/516 (48%), Gaps = 34/516 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI    + G + +A   +RK       P +   + +++GL +  + D   +  EEM
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   + VTY  L++   GQG   +A +L + M   G  P ++ + ++I GLC E ++
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M + G VP++  +  L+   C++  V+ A  F+ ++L     P+ VT+  +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G L AAG     +A+    P +F +   +DG  KAGNL  A      M +  +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP+  TY+ LI GLC  G+L+ A GLL+    +   A +  ++SL+ G C+   +E+A+ 
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M      PNVV F+SL++G C+A  +D A  L+  M       DV+ +  L+ GL 
Sbjct: 300 LLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 411 KDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           K   + E  R  + M   +  +P+V T S+LI GL   GR++ A   + E+    +G   
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVY-ERMVAVEG--I 413

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDM-----RSDN----------------LRPDN 508
           SPN   YA +++ LC  G   +  + F  M     RS +                 RP  
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            TY T++ GL ++  + D + LL  MI+ G+ PD +
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVI 509



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 13/490 (2%)

Query: 49   KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            + N   +ST++    ++G +E+A+ V R++     LP     N L++G  K+ +      
Sbjct: 575  RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 106  FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
               EM+  G    VVTY  L    C  G   +A+ + D M  +G  P  + Y+ ++ GLC
Sbjct: 635  LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694

Query: 166  NENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++ EA   F  M R+  V P++  Y+AL+DG CK   ++ A EF   M+     P+V
Sbjct: 695  KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 225  VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            VTF +L++GLC  G +      F  MA+ G   +I+ YN +I+ +C  G    A +L  E
Sbjct: 755  VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814

Query: 285  MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
            M+   I+ +  T+ I+IK LCG  +++ A      + ++    + ++YN+LI        
Sbjct: 815  MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRR 872

Query: 345  MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
             E+AL +   M   G  P+   + +++DG  KAG+ + A  L  EM  +   PD+  +T 
Sbjct: 873  SEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTI 932

Query: 405  LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            +I GLSK   +      ++EML   + P     SSLI    K  ++ +A         ++
Sbjct: 933  MISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL-----RS 987

Query: 465  DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G    P   +Y+ ++ +LC +    KA ++  +M+S N  P    +T++    +   R+
Sbjct: 988  SG--IEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRV 1045

Query: 525  LDVMMLLADM 534
             + + L+ D+
Sbjct: 1046 DEAVKLVNDL 1055



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 250/522 (47%), Gaps = 21/522 (4%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA-------LLNGLIKKGKFDSV 103
            N   +STLI   S+M  ++EAL +  K+  L     C A       +++GL+K G+ +  
Sbjct: 542  NVVTYSTLIDGLSKMAKMDEALQLLAKMVEL----GCRANTVTYSTVVDGLLKVGRMEDA 597

Query: 104  WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
                 +M   G + D VTY  LID    +  + +A+ L  EM++ G  P+VV YT L HG
Sbjct: 598  VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 657

Query: 164  LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL-QP 222
            LC   +  EA  +   M   G  PN  TY++++DG CK   V  AL ++ +M    +  P
Sbjct: 658  LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717

Query: 223  NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
            +V+ +  L+DGLCK G +  A  F   M + G  P++  ++ LI+G C AG +   + L 
Sbjct: 718  HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 777

Query: 283  SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
              M +     D++ YN +I   C  G+   A  LL++M   GI  N VT+  +I   C  
Sbjct: 778  CGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN 837

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
              +++A+S    + E   +   +++++LI     +   + A+ L   MV     PD   +
Sbjct: 838  DRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNY 895

Query: 403  TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
              ++DGL K G+ +   +L +EM     +P + T + +I GL K  ++  A ++F E   
Sbjct: 896  MTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLR 955

Query: 463  KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
            K       P+ ++Y+++I A C   ++  A KL   +RS  + P    Y+TM+  L + +
Sbjct: 956  KN----LKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNR 1008

Query: 523  RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                 + ++ +M      P   I   +   Y   G +  A +
Sbjct: 1009 GTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 228/507 (44%), Gaps = 13/507 (2%)

Query: 82   PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
            P +   + L++GL K  K D   +   +MV  G  A+ VTY  ++D     G +  A+ +
Sbjct: 541  PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 600

Query: 142  FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              +M D G  P  V Y  LI G     ++ EA  + R M E G  P++ TY  L  G C+
Sbjct: 601  LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 660

Query: 202  VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIF 260
                + A+E    M      PN +T+  ++DGLCK G +  A  +F  MA+  V  P++ 
Sbjct: 661  SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 720

Query: 261  VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
             Y+ LIDG CKAG + EA      M +    PDV T++ILI GLC  G+++    L   M
Sbjct: 721  AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 321  YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             + G  A++  YN++I+ YC +G+   A ++  +M   G+  N VT   +I   C    I
Sbjct: 781  AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            D A+  +    I     D + +  LI  L      ++ L L + M+    +P      ++
Sbjct: 841  DEAVSYFHS--IPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898

Query: 441  IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
            + GLFK G    A     E   +      SP+   Y  +I  L    Q+  A   F +M 
Sbjct: 899  MDGLFKAGSPEVAAKLLQEMRSRGH----SPDLRTYTIMISGLSKAKQLPLACDYFEEML 954

Query: 501  SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              NL+PD   Y++++    +A ++ D   LL      GI P   +   MV    +N    
Sbjct: 955  RKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTD 1011

Query: 561  SAFRCSEFLKESRIGSSETEGHTTRSF 587
             A    E ++E +  + E   H   S 
Sbjct: 1012 KAL---EVIREMKSKNCEPGIHIWTSL 1035



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 228/463 (49%), Gaps = 12/463 (2%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           +VTY VLI+  C  G V  A   F + I  G  PTVV Y+ +I GLC +N++ +   +  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  PN  TYN L++          A      M  +   P ++TFG+++ GLCK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           E+ AA      M   G  P++ ++  L+   C+ G + EA     ++     +PD  TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            ++ GL   G+LE A  +LQ + +      V T+   +DG  K G++  A      M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           GV PN VT+ +LIDG CKAG +D A+GL  +   K+    +  F++L+ GL +   ++E 
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           ++L K M      P+V   +SL++GL +  R+  A   F    D      CS + + Y  
Sbjct: 298 IQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELF----DVMKESGCSADVITYNI 350

Query: 479 IIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           +++ LC   +I +A +    M R++   P+  T++T+++GL  A R+     +   M+ +
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410

Query: 538 -GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
            GI P+      ++ G  + GD +   +C E + E    SS +
Sbjct: 411 EGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSS 453


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/569 (30%), Positives = 257/569 (45%), Gaps = 26/569 (4%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMG 66
           NA LY + R  +      LL+S +P  V Y++                   L+ A S+  
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSSRPTTVAYNI-------------------LLAALSDHA 117

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVL 125
           H    L    K  V       N LL GL + G+ D+     +     G+ A DV+ +  L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNTL 175

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C  GD   AL++ D M  +G+   VV Y  L+ G C   ++  A  +   M+E GV
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            PN+ TY   +  YC+   V  A + Y  M+ + +  +VVT   L+ GLC+ G    A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M K G  PN   Y  LID   KAG   E +SL  EM    +  D+ TY  L+  L 
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+ +  +  L+    + +  N VTY  LID  CK  ++++A  V  +M EK + PNVV
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TFSS+I+G  K G +D A      M  + + P+VV +  LIDG  K       L +Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           L   +  + F V SL++GL +NG+I  A+  F + +    G   S +HV Y  +I  L  
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS----GSGLSLDHVNYTTLIDGLFK 531

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A K   ++   N+ PD   Y   +  L    +  +    L +M  MG+ PD   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              M+  +   G+   A +    +K S I
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSI 620



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 259/552 (46%), Gaps = 42/552 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  +  +++EA  V  ++E   + P +   ++++NG +K+G  D   E+ 
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+  +VVTYG LID          AL ++ +M+ +G++    I   L++GL   
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA ++F+     G+  +   Y  L+DG  K  D+  A +F  E++  N+ P+ V +
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V ++ LC +G+ + A +F   M   G+ P+   YN +I  HC+ G   +A+ L  EM+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG----------------------- 324
             I P++ TYN L+ GL G G +E A+ LL +M   G                       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 325 ------------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                       + A++  YN+L+   C  G   KA  V  +M   G+ P+ +TF++LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+ ++D A   Y +M+ +++ P++  F  L+ GL   G + E   +  EM ++ + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T   L  G  K      A+  + E   K   G+  P    Y A+I      G + +A
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGK---GFV-PKVSTYNALISDFTKAGMMTQA 853

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +LF DM+   + P +CTY  ++ G  R +   +V   L DM + G  P       + R 
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 553 YQENGDLKSAFR 564
           + + G    A R
Sbjct: 914 FSKPGMTWQAQR 925



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 244/513 (47%), Gaps = 9/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPA----IQACNALLNGLIKKGKFDSVWEFYEE 109
             S L+      G   EA  ++R+++ + A    +  C  L++ L K G+   +     E
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT-LIDSLAKAGRGKELLSLLGE 334

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+V D+VTY  L+D    QG   +  +     +   + P  V YT+LI  LC  + 
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EAE +   M E  + PN+ T++++++G+ K   +++A E+   M    + PNVVT+G 
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG  K     AA   +  M   GV  N F+ + L++G  + G + EAM+L  +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +S D   Y  LI GL   G +  A    Q++    +L + V YN  I+  C  G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S  ++M   G++P+  T++++I   C+ G    A+ L  EM + S+ P+++ +  L+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G +++   L  EM+ A  +PS  T   ++    ++ R    L+  L+  +       
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR----LDVILDIHEWMMNAGL 690

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             +  +Y  ++Q LCY G   KA+ +  +M    + PD  T+  ++ G  ++  + +   
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             A M+   I P+      ++ G +  G +  A
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 240/516 (46%), Gaps = 7/516 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++  I+ +     +EEA  +Y  +    VL  +   +AL+ GL + G+F   +  +
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY  LID     G   + L+L  EM+ +G+   +V YT L+  L  +
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  E +   R      + PN  TY  L+D  CK  +V+ A +   EM   ++ PNVVTF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++G  K G L  A  +   M + G+ PN+  Y  LIDG  K      A+ +  +M  
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G++E A  L +     G+  + V Y +LIDG  K GDM  
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     ++ ++ + P+ V ++  I+  C  G    A    TEM    L PD   +  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              + G   + L+L  EM  + I P++ T ++L+ GLF  G +  A  + L   +    G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA-KYLLN--EMVSAG 654

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + +  ++QA     ++     +   M +  L  D   Y T+L+ L         
Sbjct: 655 F-SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 263/539 (48%), Gaps = 10/539 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
           ++P+ +  +  T I A+ +M     A  ++ K++ L   P +  CN L+N L++     S
Sbjct: 134 DLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSS 193

Query: 103 VW---EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           +    +  ++ +  G+V +  ++ +LI   C +  V  AL+  ++M + G  P  V Y  
Sbjct: 194 ILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNT 253

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++  L     + EA  +   M+  G+ PN +TYN L+ GYC++  +  A +    M  +N
Sbjct: 254 ILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN 313

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P V T+ +L++G C  G++  A      M K  V P++  YN LIDG  +  +  E  
Sbjct: 314 LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVY 373

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           SL  EM+K  +  +  TYNI++K +C  G +  A   L KM + G+  + VTYN+LI  Y
Sbjct: 374 SLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAY 433

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G M KA  +  +MT KG++ +  T ++++   C    +D A  L      +  + D 
Sbjct: 434 CKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDE 493

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  LI G  KD      L L+ EM E +I PS  T +S+I GL ++ ++  A    ++
Sbjct: 494 VSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQA----ID 549

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
           K ++       P+   Y  II   C +G + KA +  ++M  +  +PD  T   +LRGL 
Sbjct: 550 KLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLC 609

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           R   +   + L   ++  G   D V    ++    + G  ++A+     ++  ++G  +
Sbjct: 610 REGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQ 668



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 258/519 (49%), Gaps = 12/519 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ LI  +     +++AL WV +  E   +P   + N +L+ L+K+       +  
Sbjct: 212 NTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLL 271

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   GL  +  TY +L+   C  G + +A  + + M    + PTV  Y +L++G CN+
Sbjct: 272 LDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCND 331

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA  +   M +  V+P++ TYN L+DG  +  D +       EM    ++ N VT+
Sbjct: 332 GKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTY 391

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +++  +CK G +  A      M + G+ P+   YN LI  +CKAG + +A  +  EM  
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D +T N ++  LC   +L+ A  LL    K G + + V+Y  LI GY K+   ++
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL++  +M E+ + P+ +T++S+I G C++  +D A+    EM+   LVPD   +  +I 
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIH 571

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G   +GN+++  + + EM+E    P V+T + L+ GL + G +  AL  F     K    
Sbjct: 572 GFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK-- 629

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               + V Y  II +LC +G+   A  L ++M +  L PD  TY  ++  L  A R+ + 
Sbjct: 630 --DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687

Query: 528 MMLLADMIKMGIVPDAVI-----NQVMVRGYQENGDLKS 561
                 M++ GIV D  +       V+     E+ D KS
Sbjct: 688 EEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKS 726



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 234/495 (47%), Gaps = 22/495 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+  +  +G ++EA   + +  +  +LP +   N L+NG    GK D  +   
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    ++ DVVTY  LID C    D  +  +L +EM  KG++   V Y I++  +C +
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK 401

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M EA +    M E G+ P+  TYN L+  YCK   + +A     EM    L+ +  T 
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC   +L  A N     +K G   +   Y  LI G+ K      A++L  EM++
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKE 521

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +I P   TYN +I GLC   +++ A   L +M + G++ +  TYN +I G+C EG++EK
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK 581

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M E   +P+V T + L+ G C+ G ++ A+ L+  +V K    DVV +  +I 
Sbjct: 582 AFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIIS 641

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE-------- 459
            L K+G  +    L  EM   K+ P  +T   +I  L   GRI  A  F L+        
Sbjct: 642 SLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVH 701

Query: 460 ----KTDKTDGGYCSP-------NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
               K  K      S          + Y+  I  LC   +   A  LF ++  + +  + 
Sbjct: 702 DQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNK 761

Query: 509 CTYTTMLRGLLRAKR 523
            TY  ++ GL++ ++
Sbjct: 762 YTYLNLMEGLIKRRK 776


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 247/493 (50%), Gaps = 15/493 (3%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E+ H + ++W  +     P +   N L+  L +  +        E+M   GLV D  T+ 
Sbjct: 174 EISHAKMSVWGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RE 182
            ++     +GD+  AL + ++M++ G   + V   +++HG C E ++ +A +  + M  +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G  P+ YT+N L++G CK   V  A+E    ML     P+V T+  ++ GLCK+GE++ 
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A      M      PN   YN LI   CK   + EA  L   +    I PDV T+N LI+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GLC       A  L ++M  +G   +  TYN LID  C +G +++AL++  QM   G   
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           +V+T+++LIDG CKA     A  ++ EM +  +  + V +  LIDGL K   +++  +L 
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M+     P  +T +SL+    + G I  A +     T  ++G  C P+ V Y  +I  
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT--SNG--CEPDIVTYGTLISG 584

Query: 483 LCYDGQILKASKLFS--DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-I 539
           LC  G++  ASKL     M+  NL P    Y  +++GL R ++  + + L  +M++    
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642

Query: 540 VPDAVINQVMVRG 552
            PDAV  +++ RG
Sbjct: 643 PPDAVSYRIVFRG 655



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 16/486 (3%)

Query: 58  LIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           ++  F + G +E+AL   +++       P     N L+NGL K G      E  + M+  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV TY  +I   C  G+V +A+ + D+MI +   P  V Y  LI  LC EN++ EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + R +   G++P++ T+N+L+ G C   +   A+E + EM     +P+  T+ +L+D 
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC  G+L  A N    M   G   ++  YN LIDG CKA    EA  +  EME   +S +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             TYN LI GLC   ++E A  L+ +M  EG   +  TYNSL+  +C+ GD++KA  +  
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            MT  G EP++VT+ +LI G CKAG ++ A  L   + +K +      +  +I GL +  
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624

Query: 414 NMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
              E + L++EMLE  +  P   +   +  GL    G I  A++F +E  +K   G+   
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK---GFVPE 681

Query: 472 NHVLY--AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
              LY  A  +  L  +  ++K   +   M+      +     +M++GLL+ ++  D + 
Sbjct: 682 FSSLYMLAEGLLTLSMEETLVKLVNMV--MQKARFSEEE---VSMVKGLLKIRKFQDALA 736

Query: 530 LLADMI 535
            L  ++
Sbjct: 737 TLGGVL 742



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 210/415 (50%), Gaps = 5/415 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           GI+P V  + +LI  LC  +++  A  M   M   G+VP+  T+  +M GY +  D++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLID 267
           L    +M+      + V+  V++ G CK G +  A NF   M+ + G FP+ + +N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CKAG++  A+ +   M +    PDV+TYN +I GLC +G+++ A  +L +M       
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VTYN+LI   CKE  +E+A  +   +T KG+ P+V TF+SLI G C   N   AM L+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  K   PD   +  LID L   G + E L + K+M  +    SV T ++LI G  K 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            +   A   F    D+ +    S N V Y  +I  LC   ++  A++L   M  +  +PD
Sbjct: 484 NKTREAEEIF----DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             TY ++L    R   +     ++  M   G  PD V    ++ G  + G ++ A
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 232/471 (49%), Gaps = 6/471 (1%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEP 152
           L + G FD + +  E+M          T+ +LI+         + L++ D MID+ G++P
Sbjct: 93  LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  +++ L + N +   E     M   G+ P++ T+N L+   C+   +  A+   
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M  + L P+  TF  +M G  + G+L  A      M +FG   +    N ++ G CK 
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272

Query: 273 GNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           G + +A++   EM   +   PD +T+N L+ GLC  G ++ A  ++  M +EG   +V T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNS+I G CK G++++A+ V  QM  +   PN VT+++LI   CK   ++ A  L   + 
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K ++PDV  F +LI GL    N +  + L++EM      P  FT + LI  L   G++ 
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            ALN    K  +  G  C+ + + Y  +I   C   +  +A ++F +M    +  ++ TY
Sbjct: 453 EALNML--KQMELSG--CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            T++ GL +++R+ D   L+  MI  G  PD      ++  +   GD+K A
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 7/432 (1%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           L+D    Q D   AL LF+    K    P   +Y  ++  L       + + +   M+  
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRA 242
                  T+  L++ Y +    +  L     M+    L+P+   +  +++ L     L+ 
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
                  M+ +G+ P++  +N LI   C+A  L  A+ +  +M  + + PD  T+  +++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVE 361
           G    G L+GA  + ++M + G   + V+ N ++ G+CKEG +E AL+   +M+ + G  
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+  TF++L++G CKAG++  A+ +   M+ +   PDV  + ++I GL K G +KE + +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M+    +P+  T ++LI  L K  ++  A       T K       P+   + ++IQ
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG----ILPDVCTFNSLIQ 408

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC       A +LF +MRS    PD  TY  ++  L    ++ + + +L  M   G   
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468

Query: 542 DAVINQVMVRGY 553
             +    ++ G+
Sbjct: 469 SVITYNTLIDGF 480



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 170/363 (46%), Gaps = 21/363 (5%)

Query: 205 VNRALEFYHEMLHHNLQP--NVVTFGV------------LMDGLCKVGELRAAGNFFVHM 250
           +++A+   H     NL P  + ++F              L+D L    +  AA   F   
Sbjct: 14  ISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLA 73

Query: 251 AKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +K   F P   +Y  ++    ++G+  +   +  +M+         T+ ILI+       
Sbjct: 74  SKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFEL 133

Query: 310 LEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVC-SQMTEKGVEPNVVTF 367
            +    ++  M  E G+  +   YN +++    +G+  K + +  ++M+  G++P+V TF
Sbjct: 134 QDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + LI   C+A  +  A+ +  +M    LVPD   FT ++ G  ++G++   LR+ ++M+E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
              + S  +V+ ++HG  K GR+ +ALNF  E +++ DG +  P+   +  ++  LC  G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ-DGFF--PDQYTFNTLVNGLCKAG 309

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            +  A ++   M  +   PD  TY +++ GL +   + + + +L  MI     P+ V   
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 548 VMV 550
            ++
Sbjct: 370 TLI 372



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 471 PNHVLYAAIIQALCYDGQILKASKL-FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           P+   Y  ++  L  DG  LK  ++  + M    ++PD  T+  +++ L RA ++   ++
Sbjct: 152 PDTHFYNRMLNLLV-DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L DM   G+VPD      +++GY E GDL  A R  E + E
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 225/434 (51%), Gaps = 39/434 (8%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           ++C   L  L + G  +   EF  +MV  G+   V ++  ++D  C +G+V++A  L DE
Sbjct: 158 RSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDE 217

Query: 145 MIDKGIEPTVVIY-----------------------------------TILIHGLCNENK 169
           ++ KG +P+V+ Y                                   T+LI      +K
Sbjct: 218 LVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSK 277

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EAE +F  M + G+ P++Y Y ++++  CK  ++ RA   + EM    L PN  T+G 
Sbjct: 278 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 337

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++G CK GE++AA      M   GV  N  ++N L+DG+CK G + EA+ L + M++  
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 397

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              D FT NI+  G C   + E A+ LL  M + G+  NVV+++ LID YCKE +  +A 
Sbjct: 398 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 457

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M +KG  P+VVT+++ I+  CK G ++ A  L  EM  + L+PD   +T+LIDG 
Sbjct: 458 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 517

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              GN+   L L+ EM +  +  +V T + +I GL K+GR   A   +    D+ +    
Sbjct: 518 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY----DEMNKEGI 573

Query: 470 SPNHVLYAAIIQAL 483
            P+  +Y+++I +L
Sbjct: 574 VPDDGIYSSLIASL 587



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 204/381 (53%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P++   N LLNG I+      V E    M    +  +V TY +LI+       + +A  L
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           FDEM+ KGIEP V IYT +I+  C    M  A  +F  M E  +VPN YTY AL++G CK
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             ++  A    ++M    +  N V F  LMDG CK G +  A      M + G   + F 
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 404

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N +  G C++    EA  L   ME+  ++P+V +++ILI   C       A  L + M 
Sbjct: 405 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+G   +VVTYN+ I+ YCK+G ME+A  + ++M E+G+ P+  T++SLIDG+  +GN+D
Sbjct: 465 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVD 524

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ EM    L  +VV +T +I GLSKDG   E  +LY EM +  I P     SSLI
Sbjct: 525 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584

Query: 442 HGLFKNGRISNALNFFLEKTD 462
             L K G + + L   +++ +
Sbjct: 585 ASLHKVGPLVSGLENVVDRIE 605



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 269/557 (48%), Gaps = 30/557 (5%)

Query: 31  PHHVCYSVFNALNSLEIPKFNPSVFSTLII--------AFSEMGHI------EEALW--V 74
           P   C   F+ L   + P   P + + LI+         F+EM ++      +  LW  V
Sbjct: 47  PTRSCLRFFDFLR--QNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 104

Query: 75  YRKIEVL------PAI--QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            R +  +      P+I  + C+ L    +    FDS  E ++     G   D  +    +
Sbjct: 105 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 164

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 G++   +    +M+D GIE  V  +T ++ GLC + ++V A+++   +   G  
Sbjct: 165 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 224

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ TYN L++GY ++ DV    E    M  + +  NV T+ +L++   +  ++  A   
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M K G+ P++++Y  +I+ +CK GN+  A  L  EM +  + P+ +TY  LI G C 
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+++ AE ++  M  +G+  N V +N+L+DGYCK+G +++AL + + M +KG E +  T
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 404

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
            + +  G C++   + A  L   M  + + P+VV F+ LID   K+ N  E  RL+K M 
Sbjct: 405 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    PSV T ++ I    K G++  A     E  ++       P+   Y ++I      
Sbjct: 465 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG----LMPDTYTYTSLIDGERAS 520

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A +LF++M    L  +  TYT ++ GL +  R  +   L  +M K GIVPD  I 
Sbjct: 521 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 580

Query: 547 QVMVRGYQENGDLKSAF 563
             ++    + G L S  
Sbjct: 581 SSLIASLHKVGPLVSGL 597


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 225/434 (51%), Gaps = 39/434 (8%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           ++C   L  L + G  +   EF  +MV  G+   V ++  ++D  C +G+V++A  L DE
Sbjct: 154 RSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDE 213

Query: 145 MIDKGIEPTVVIY-----------------------------------TILIHGLCNENK 169
           ++ KG +P+V+ Y                                   T+LI      +K
Sbjct: 214 LVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSK 273

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EAE +F  M + G+ P++Y Y ++++  CK  ++ RA   + EM    L PN  T+G 
Sbjct: 274 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 333

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++G CK GE++AA      M   GV  N  ++N L+DG+CK G + EA+ L + M++  
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 393

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              D FT NI+  G C   + E A+ LL  M + G+  NVV+++ LID YCKE +  +A 
Sbjct: 394 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 453

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M +KG  P+VVT+++ I+  CK G ++ A  L  EM  + L+PD   +T+LIDG 
Sbjct: 454 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 513

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              GN+   L L+ EM +  +  +V T + +I GL K+GR   A   +    D+ +    
Sbjct: 514 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY----DEMNKEGI 569

Query: 470 SPNHVLYAAIIQAL 483
            P+  +Y+++I +L
Sbjct: 570 VPDDGIYSSLIASL 583



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 204/381 (53%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P++   N LLNG I+      V E    M    +  +V TY +LI+       + +A  L
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           FDEM+ KGIEP V IYT +I+  C    M  A  +F  M E  +VPN YTY AL++G CK
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             ++  A    ++M    +  N V F  LMDG CK G +  A      M + G   + F 
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 400

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N +  G C++    EA  L   ME+  ++P+V +++ILI   C       A  L + M 
Sbjct: 401 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+G   +VVTYN+ I+ YCK+G ME+A  + ++M E+G+ P+  T++SLIDG+  +GN+D
Sbjct: 461 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVD 520

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ EM    L  +VV +T +I GLSKDG   E  +LY EM +  I P     SSLI
Sbjct: 521 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580

Query: 442 HGLFKNGRISNALNFFLEKTD 462
             L K G + + L   +++ +
Sbjct: 581 ASLHKVGPLVSGLENVVDRIE 601



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 269/557 (48%), Gaps = 30/557 (5%)

Query: 31  PHHVCYSVFNALNSLEIPKFNPSVFSTLII--------AFSEMGHI------EEALW--V 74
           P   C   F+ L   + P   P + + LI+         F+EM ++      +  LW  V
Sbjct: 43  PTRSCLRFFDFLR--QNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 100

Query: 75  YRKIEVL------PAI--QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            R +  +      P+I  + C+ L    +    FDS  E ++     G   D  +    +
Sbjct: 101 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 160

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 G++   +    +M+D GIE  V  +T ++ GLC + ++V A+++   +   G  
Sbjct: 161 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 220

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ TYN L++GY ++ DV    E    M  + +  NV T+ +L++   +  ++  A   
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M K G+ P++++Y  +I+ +CK GN+  A  L  EM +  + P+ +TY  LI G C 
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+++ AE ++  M  +G+  N V +N+L+DGYCK+G +++AL + + M +KG E +  T
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 400

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
            + +  G C++   + A  L   M  + + P+VV F+ LID   K+ N  E  RL+K M 
Sbjct: 401 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +    PSV T ++ I    K G++  A     E  ++       P+   Y ++I      
Sbjct: 461 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG----LMPDTYTYTSLIDGERAS 516

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G + +A +LF++M    L  +  TYT ++ GL +  R  +   L  +M K GIVPD  I 
Sbjct: 517 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 576

Query: 547 QVMVRGYQENGDLKSAF 563
             ++    + G L S  
Sbjct: 577 SSLIASLHKVGPLVSGL 593


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 227/421 (53%), Gaps = 7/421 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++LF ++   GI+P++V  TIL++  C+   +    S+   + + G  PN  T+  L+ 
Sbjct: 29  AISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIK 88

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C       AL F+  ++ H  + + V++ +LM+GLCK+GE RAA      + K  V  
Sbjct: 89  GMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQM---LRKTWVNA 145

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ +Y+ +ID  CK   + +A  L SEM    I P+V+T++IL+  LC   + + A  LL
Sbjct: 146 DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL 205

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M K+G+  NVVTY +++DGYC    + KAL++ + M ++GVEPNV  ++ +I+G CK 
Sbjct: 206 AMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKK 265

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D AM L+ EM  K + PDVV +  LIDGL K G +  +L L  EM     T  + T 
Sbjct: 266 KRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITY 325

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SL+H L KN  +  A+    E  D+       PN   Y  +I  LC DG++  A  +F 
Sbjct: 326 NSLLHALCKNHHLDQAITLVKEIKDQG----IQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           ++ ++       TY  M+ GL +     + + LL+ M     +PDAV  + ++    E G
Sbjct: 382 EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441

Query: 558 D 558
           +
Sbjct: 442 E 442



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 238/448 (53%), Gaps = 10/448 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ ++ +  ++ H   A+ ++R++E   + P+I     L+N     G    ++    +++
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   + +T+  LI   C  G   +AL   D ++  G +   V Y IL++GLC   KM 
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC---KMG 129

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E  +  + +R+  V  ++  Y+ ++D  CK   V  A   Y EM+   + PNV TF +L+
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK  + + A N    M K GV PN+  Y  ++DG+C    + +A+++ + M +  + 
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V+ YNI+I GLC   +++ A  L ++M+ + I  +VVTYN LIDG CK G +  +L +
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M   G   +++T++SL+   CK  ++D A+ L  E+  + + P+V  +T LIDGL K
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCK 369

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           DG +++   +++E+L      +V+T + +I+GL K G    AL       D      C P
Sbjct: 370 DGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNA----CIP 425

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDM 499
           + V Y  II AL   G+ +K +KL   M
Sbjct: 426 DAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 220/418 (52%), Gaps = 8/418 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIEVL---PAIQACNALL 91
           +  +    LE     PS+ +  I+   +   G I     +  KI  +   P       L+
Sbjct: 28  TAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLI 87

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G+   G+      F++ +V  G   D V+Y +L++  C  G+   A+ +  +     + 
Sbjct: 88  KGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVN 144

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
             VV+Y+ +I  LC    + +A  ++  M   G+ PN+YT++ L+D  CK     +A+  
Sbjct: 145 ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNL 204

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M+   ++PNVVT+G +MDG C V ++  A N F  M + GV PN++ YN +I+G CK
Sbjct: 205 LAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCK 264

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              + EAM+L  EM   +I+PDV TYNILI GLC +G++  +  L+ +M   G   +++T
Sbjct: 265 KKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIIT 324

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNSL+   CK   +++A+++  ++ ++G++PNV T+++LIDG CK G ++ A  ++ E++
Sbjct: 325 YNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEIL 384

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
            +     V  +  +I+GL K G   E L L   M +    P   +  ++I+ L + G 
Sbjct: 385 TEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 203/384 (52%), Gaps = 16/384 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--------EVLPAIQACNALLNGLIKKGKFDS 102
           N   F+TLI      G   EAL  +  +        +V  AI     L+NGL K G+  +
Sbjct: 79  NSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI-----LMNGLCKMGETRA 133

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             +   +     + ADVV Y  +ID  C    V  A  L+ EMI KGI P V  ++IL+ 
Sbjct: 134 AMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVD 190

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC + K  +A ++   M + GV PN+ TY A+MDGYC V  VN+AL  ++ M+   ++P
Sbjct: 191 ALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP 250

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NV  + ++++GLCK   +  A N F  M    + P++  YN LIDG CK G +  ++ L 
Sbjct: 251 NVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELV 310

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM     + D+ TYN L+  LC    L+ A  L++++  +GI  NV TY +LIDG CK+
Sbjct: 311 DEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKD 370

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +E A  +  ++  +G    V T++ +I+G CK G  D A+ L + M   + +PD V +
Sbjct: 371 GRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSY 430

Query: 403 TALIDGLSKDGNMKETLRLYKEML 426
             +I  LS+ G   +T +L   M+
Sbjct: 431 ETIIYALSEKGETVKTNKLLCAMI 454



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 191/348 (54%), Gaps = 2/348 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF-DSVWEFY 107
           K +   ++ L+    +MG    A+ + RK  V   +   + +++ L K GKF    +  Y
Sbjct: 112 KLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCK-GKFVTDAYRLY 170

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+  G+  +V T+ +L+D  C      +A+NL   M+ KG++P VV Y  ++ G C  
Sbjct: 171 SEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLV 230

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N++ +A ++F  M + GV PN++ YN +++G CK   V+ A+  + EM    + P+VVT+
Sbjct: 231 NQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTY 290

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+DGLCK+G++  +      M   G   +I  YN L+   CK  +L +A++L  E++ 
Sbjct: 291 NILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD 350

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I P+V TY  LI GLC  G+LE A  + Q++  EG    V TYN +I+G CK+G  ++
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           AL++ S+M +    P+ V++ ++I    + G       L   M+++ L
Sbjct: 411 ALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 200/416 (48%), Gaps = 36/416 (8%)

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M +    P +  +N ++    K+     A+  + ++  + ++P++VT  +LM+  C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +    +    + K G  PN   +  LI G C  G  +EA+     +       D  +Y I
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 300 LIKGLCGVGQLEGAEGLLQK--------------------------------MYKEGILA 327
           L+ GLC +G+   A  +L+K                                M  +GI  
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NV T++ L+D  CK+   ++A+++ + M +KGV+PNVVT+ +++DG C    ++ A+ ++
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             MV + + P+V  +  +I+GL K   + E + L+KEM   KI P V T + LI GL K 
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G+IS +    LE  D+      + + + Y +++ ALC +  + +A  L  +++   ++P+
Sbjct: 301 GKISTS----LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            CTYTT++ GL +  R+ D  ++  +++  G         VM+ G  + G    A 
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 412



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 170/361 (47%), Gaps = 9/361 (2%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           ML  +  P ++ F  ++  L K+     A + F  +   G+ P+I     L++ +C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +    S+ +++ K    P+  T+  LIKG+C  GQ   A      +   G   + V+Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 335 LIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           L++G CK G+   A+    QM  K  V  +VV +S++ID  CK   +  A  LY+EM+ K
Sbjct: 121 LMNGLCKMGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            + P+V  F+ L+D L KD   K+ + L   M++  + P+V T  +++ G     +++ A
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           LN F     +       PN   Y  II  LC   ++ +A  LF +M    + PD  TY  
Sbjct: 237 LNIFNVMVQEG----VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++ GL +  ++   + L+ +M  +G   D +    ++    +N  L  A    + +K+  
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352

Query: 574 I 574
           I
Sbjct: 353 I 353


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 245/509 (48%), Gaps = 31/509 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSVW 104
           K N   +S +I    +   +++AL +++ +      +P +   N+LL GL    +    +
Sbjct: 105 KLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAF 164

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +E M   G   +V++Y  L+D  C  G + +A  L++EM++K   P +V YT  + GL
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGL 224

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTY-----------------NALMDGYCKVADVNR 207
           C  N++ EA    R M   G   +   +                 N +++  C+   ++ 
Sbjct: 225 CKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDE 284

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF---PNIFVYNC 264
           A + + EM+  N  P+   F  L+  +CK   L      F  M     F   PN+  YN 
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           ++D  CKA  L EA  L +EM  + +SPDV TY+ L+ GLC +G+L+ A  LL++M KEG
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +  T  S+++   K G ++ ALS    M  +G  P++VT+++L+DG CKAG ID A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
               +MV     PDV  +T +I  L + G       +++EM++  + P      SL+ GL
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +NG    AL     KT       C P+ V++  ++  LC  G+   A ++   M     
Sbjct: 525 ARNGLEDLALELL--KT-----SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGF 577

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             D  TY  ++RGL +  ++     L+ D
Sbjct: 578 PADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 247/506 (48%), Gaps = 25/506 (4%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W+ R+     ++   N  L+ L K       +E +++M   G   D  TY +++   C  
Sbjct: 27  WLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKA 86

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYT 191
           G++ KA  L  ++ + G++  V+ Y+++I G C  +++ +A  +F++M    G VP++ T
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVT 146

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N+L+ G C    ++ A   +  M     +PNV+++  L+DGLCK G L  A   +  M 
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +    P++  Y   + G CKA  + EA   C +M       D   ++ +I  LC  G  E
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 312 GAE----------GLLQ---KMYKEGILAN----VVTYNSLIDGYCKEGDMEKALSVCSQ 354
            A+          G+L    K ++E I  N       +N+LI   CK   +   + +  +
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326

Query: 355 ---MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M E    PN+ T++ ++D  CKA  +D A  L  EM    L PDVV ++AL+DGL K
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +     L +EM +  + P  FT +S+++ L K G++  AL+    +T K  G   +P
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL--ETMKARGS--TP 442

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y  ++  LC  G+I +A    + M +    PD  +YT ++  L R+ +      + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENG 557
            +M+K G++PD V+   ++ G   NG
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNG 528



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 206/435 (47%), Gaps = 61/435 (14%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +STL+    + G ++EA  ++ ++     +P + A  + + GL K  +     +   +MV
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALN-----------------LFDEMIDKGIEPTV 154
             G  AD V +  +I   C +G   +A N                  F+EMI +   P+ 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301

Query: 155 VIYTILIHGLCNENKMVEAESMF---RSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            ++  LIH +C   ++ +   +F   +SM+E    PNL TYN ++D  CK   ++ A E 
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV---------- 261
            +EM ++ L P+VVT+  L+DGLCK+G+L  A +    M+K GVFP+ F           
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 262 -------------------------YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                                    YN L+DG CKAG + EA++  ++M   + +PDVF+
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y I+I  LC  GQ  GA  + Q+M K G+L + V Y+SL+DG  + G  + AL +   + 
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LK 538

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
               +P+ V    ++DG CKAG  + A  +   M       D   +  ++ GL K G + 
Sbjct: 539 TSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVD 598

Query: 417 ETLRLYKEMLEAKIT 431
           +  +L  +  E   +
Sbjct: 599 KARQLVDDASETHTS 613



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 19/408 (4%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R+ G   +++TYN  +D   K      A E + +M      P+  T+ +++ GLCK GEL
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNI 299
             A      + + GV  N+  Y+ +IDG CKA  + +A+ +   M       PDV T+N 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+KGLC   ++  A  L + M K G   NV++Y++L+DG CK G +++A  +  +M EK 
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA--------------- 404
             P++V ++S + G CKA  +  A     +MV K    D V F+                
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 405 --LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             +I+ L + G + E  + ++EM+     PS    ++LIH + K+ R+ + +  F ++  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF-QRMK 328

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                YC PN   Y  ++  LC   Q+ +A +L ++M +  L PD  TY+ ++ GL +  
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++     LL +M K G+ PD+  +  ++    + G +  A    E +K
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 174/342 (50%), Gaps = 13/342 (3%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL- 81
           E+L +S      C + F  + S   P  +  +F+TLI A  +   + + + ++++++ + 
Sbjct: 274 EHLCRSGMLDEACKT-FEEMISRNHPP-SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 82  -----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
                P ++  N +++ L K  + D   E   EM   GL  DVVTY  L+D  C  G + 
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A +L +EM  +G+ P       +++ L    K+  A S   +M+  G  P+L TYN L+
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           DG CK   ++ A+ F  +M+     P+V ++ +++  LC+ G+   A   F  M K GV 
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEG 315
           P+  +Y+ L+DG  + G   E ++L  E+ K  +  PD   + +++ GLC  G+ E A  
Sbjct: 512 PDTVLYHSLLDGLARNG--LEDLAL--ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACE 567

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           ++++M   G  A+  TY +++ G  K G ++KA  +    +E
Sbjct: 568 VVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 5/174 (2%)

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  +   +D L+K    +     +++M      P  FT S ++ GL K G +  A     
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRPDNCTYTTMLRG 517
           +  +         N + Y+ +I   C   ++  A ++F  M +     PD  T+ ++L+G
Sbjct: 98  QLRESG----VKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKG 153

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           L   +RM +  +L   M K G  P+ +    ++ G  + G L  A R  E + E
Sbjct: 154 LCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 173/569 (30%), Positives = 257/569 (45%), Gaps = 26/569 (4%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMG 66
           NA LY + R  +      LL+S +P  V Y++                   L+ A S+  
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSSRPTTVAYNI-------------------LLAALSDHA 117

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVL 125
           H    L    K  V       N LL GL + G+ D+     +     G+ A DV+ +  L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNTL 175

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C  GD   AL++ D M  +G+   VV Y  L+ G C   ++  A  +   M+E GV
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            PN+ TY   +  YC+   V  A + Y  M+ + +  +VVT   L+ GLC+ G    A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M K G  PN   Y  LID   KAG   E +SL  EM    +  D+ TY  L+  L 
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+ +  +  L+    + +  N VTY  LID  CK  ++++A  V  +M EK + PNVV
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TFSS+I+G  K G +D A      M  + + P+VV +  LIDG  K       L +Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           L   +  + F V SL++GL +NG+I  A+  F + +    G   S +HV Y  +I  L  
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS----GSGLSLDHVNYTTLIDGLFK 531

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A K   ++   N+ PD   Y   +  L    +  +    L +M  MG+ PD   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              M+  +   G+   A +    +K S I
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSI 620



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 242/505 (47%), Gaps = 42/505 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  +  +++EA  V  ++E   + P +   ++++NG +K+G  D   E+ 
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+  +VVTYG LID          AL ++ +M+ +G++    I   L++GL   
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA ++F+     G+  +   Y  L+DG  K  D+  A +F  E++  N+ P+ V +
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V ++ LC +G+ + A +F   M   G+ P+   YN +I  HC+ G   +A+ L  EM+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK------------------------- 322
             I P++ TYN L+ GL G G +E A+ LL +M                           
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 323 ----------EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                      G+ A++  YN+L+   C  G   KA  V  +M   G+ P+ +TF++LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+ ++D A   Y +M+ +++ P++  F  L+ GL   G + E   +  EM ++ + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T   L  G  K      A+  + E   K   G+  P    Y A+I      G + +A
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGK---GFV-PKVSTYNALISDFTKAGMMTQA 853

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRG 517
            +LF DM+   + P +CTY  ++ G
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 244/513 (47%), Gaps = 9/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPA----IQACNALLNGLIKKGKFDSVWEFYEE 109
             S L+      G   EA  ++R+++ + A    +  C  L++ L K G+   +     E
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT-LIDSLAKAGRGKELLSLLGE 334

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+V D+VTY  L+D    QG   +  +     +   + P  V YT+LI  LC  + 
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EAE +   M E  + PN+ T++++++G+ K   +++A E+   M    + PNVVT+G 
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG  K     AA   +  M   GV  N F+ + L++G  + G + EAM+L  +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +S D   Y  LI GL   G +  A    Q++    +L + V YN  I+  C  G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S  ++M   G++P+  T++++I   C+ G    A+ L  EM + S+ P+++ +  L+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G +++   L  EM+ A  +PS  T   ++    ++ R    L+  L+  +       
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR----LDVILDIHEWMMNAGL 690

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             +  +Y  ++Q LCY G   KA+ +  +M    + PD  T+  ++ G  ++  + +   
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             A M+   I P+      ++ G +  G +  A
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 261/566 (46%), Gaps = 43/566 (7%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
            Y++F  ++ +     N   + TLI + ++ G  +E L +  ++    V+  +    AL+
Sbjct: 293 AYALFREMDKVGAAP-NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           + L K+GK D V +     +   L  + VTY VLID  C   +V +A  +  EM +K I 
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV ++ +I+G      + +A    R M+E G+ PN+ TY  L+DG+ K    + ALE 
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           YH+ML   ++ N      L++GL + G++  A   F   +  G+  +   Y  LIDG  K
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG++  A     E+    + PD   YN+ I  LC +G+ + A+  L +M   G+  +  T
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++I  +C++G+  KAL +  +M    ++PN++T+++L+ G    G ++ A  L  EMV
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 392 IKSLVP-----------------------------------DVVVFTALIDGLSKDGNMK 416
                P                                   D+ V+  L+  L   G  +
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           +   + +EML + I P   T ++LI G  K+  + NA   + +   +      SPN   +
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN----ISPNIATF 767

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++  L   G+I +A  +  +M    L P+N TY  +  G  +    ++ M L  +M+ 
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVG 827

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            G VP       ++  + + G +  A
Sbjct: 828 KGFVPKVSTYNALISDFTKAGMMTQA 853



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 240/516 (46%), Gaps = 7/516 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++  I+ +     +EEA  +Y  +    VL  +   +AL+ GL + G+F   +  +
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY  LID     G   + L+L  EM+ +G+   +V YT L+  L  +
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  E +   R      + PN  TY  L+D  CK  +V+ A +   EM   ++ PNVVTF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++G  K G L  A  +   M + G+ PN+  Y  LIDG  K      A+ +  +M  
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G++E A  L +     G+  + V Y +LIDG  K GDM  
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     ++ ++ + P+ V ++  I+  C  G    A    TEM    L PD   +  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              + G   + L+L  EM  + I P++ T ++L+ GLF  G +  A  + L   +    G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA-KYLLN--EMVSAG 654

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + +  ++QA     ++     +   M +  L  D   Y T+L+ L         
Sbjct: 655 F-SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 4/415 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP-AIQACN--ALLNGLIKKGKFDSVWE 105
           K N  +  +L+    + G IEEA+ +++       ++   N   L++GL K G   + ++
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F +E++   ++ D V Y V I+C C  G   +A +   EM + G++P    Y  +I   C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +  +A  +   M+   + PNL TYN L+ G      V +A    +EM+     P+ +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   ++    +   L    +    M   G+  +I VYN L+   C  G   +A  +  EM
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I+PD  T+N LI G C    L+ A     +M  + I  N+ T+N+L+ G    G +
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A +V  +M + G+EPN +T+  L  G  K  N   AM LY EMV K  VP V  + AL
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN-FFLE 459
           I   +K G M +   L+K+M +  + P+  T   L+ G +   R   + N +F E
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTE 895


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 236/469 (50%), Gaps = 11/469 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + AC AL+    K G+  +  +    +   G V DV +Y VLI   C  G++ +AL +
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D M   G+ P    Y  ++  LC+  K+ +A  +     +    P++ T   L+D  CK
Sbjct: 172 LDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            + V +A++ ++EM +   +P+VVT+ VL+ G CK G L  A  F   +  +G  P++  
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N ++   C  G   +AM L + M +    P V T+NILI  LC  G L  A  +L+ M 
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G   N  ++N LI G+C    +++A+     M  +G  P++VT++ L+   CK G +D
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ + +++  K   P ++ +  +IDGL K G  +  + L +EM    + P + T +S++
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 468

Query: 442 HGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            GL + G++  A+ FF  L++          PN  +Y +II  LC   Q   A    +DM
Sbjct: 469 GGLSREGKVREAMKFFHYLKRF------AIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
            +   +P   TYTT+++G+       D   L  ++   G+V  +++ +V
Sbjct: 523 VAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKV 571



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 238/452 (52%), Gaps = 10/452 (2%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  F ++G  + A  +   +E   A+    + N L++G  K G+ +      + M  
Sbjct: 118 TALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-- 175

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  +  TY  ++   C +G + +A+ +    +     P VV  T+LI   C E+ + +
Sbjct: 176 -GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ 234

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F  MR  G  P++ TYN L+ G+CK   ++ A+ F  ++  +  QP+V++  +++ 
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILR 294

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC  G    A      M + G  P++  +N LI+  C+ G L +A+++   M K   +P
Sbjct: 295 SLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 354

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  ++N LI+G C    ++ A   L+ M   G   ++VTYN L+   CK+G ++ A+ + 
Sbjct: 355 NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           SQ++ KG  P++++++++IDG  K G  + A+ L  EM  K L PD++  T+++ GLS++
Sbjct: 415 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G ++E ++ +  +    I P+ F  +S+I GL K+ + S A++F  +   K     C P 
Sbjct: 475 GKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKG----CKPT 530

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              Y  +I+ + Y+G    ASKL +++ S  L
Sbjct: 531 EATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 231/479 (48%), Gaps = 7/479 (1%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L  LI+ G+ +    F E M   G   DV+    LI   C  G    A  +   + + G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
              V  Y +LI G C   ++ EA    R +   GV PN  TY+A++   C    + +A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
                L     P+VVT  VL+D  CK   +  A   F  M   G  P++  YN LI G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G L EA+    ++  +   PDV ++N++++ LC  G+   A  LL  M ++G L +VV
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N LI+  C++G + KAL+V   M + G  PN  +F+ LI G C    ID A+     M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V +   PD+V +  L+  L KDG + + + +  ++     +PS+ + +++I GL K G+ 
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A+    E   K       P+ +   +++  L  +G++ +A K F  ++   +RP+   
Sbjct: 443 ELAVELLEEMCYKG----LKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFI 498

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           Y +++ GL ++++    +  LADM+  G  P       +++G    G  + A + S  L
Sbjct: 499 YNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 202/399 (50%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++ LI  + + G IEEAL V  ++ V P     +A+L  L  +GK     +     +   
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              DVVT  VLID  C +  V +A+ LF+EM +KG +P VV Y +LI G C   ++ EA 
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
              + +   G  P++ ++N ++   C       A++    ML     P+VVTF +L++ L
Sbjct: 272 RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFL 331

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+ G L  A N    M K G  PN   +N LI G C    +  A+     M      PD+
Sbjct: 332 CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDI 391

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYNIL+  LC  G+++ A  +L ++  +G   ++++YN++IDG  K G  E A+ +  +
Sbjct: 392 VTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEE 451

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KG++P+++T +S++ G  + G +  AM  +  +   ++ P+  ++ ++I GL K   
Sbjct: 452 MCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQ 511

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
               +    +M+     P+  T ++LI G+   G   +A
Sbjct: 512 TSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 190/414 (45%), Gaps = 13/414 (3%)

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +  L    ++ E       M   G  P++    AL+  +CK+     A +    +     
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             +V ++ VL+ G CK GE+  A      M   GV PN   Y+ ++   C  G L +AM 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 281 LCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           +     + +  PDV T  +LI   C   GVGQ   A  L  +M  +G   +VVTYN LI 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ---AMKLFNEMRNKGCKPDVVTYNVLIK 259

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G+CK G +++A+    ++   G +P+V++ + ++   C  G    AM L   M+ K  +P
Sbjct: 260 GFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            VV F  LI+ L + G + + L + + M +   TP+  + + LI G      I  A+ + 
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYL 379

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                +     C P+ V Y  ++ ALC DG++  A  + S + S    P   +Y T++ G
Sbjct: 380 EIMVSRG----CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 435

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           LL+  +    + LL +M   G+ PD +    +V G    G ++ A +   +LK 
Sbjct: 436 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKR 489



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 38/311 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI  F + G ++EA+   +K+      P + + N +L  L   G++    +    M
Sbjct: 253 TYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATM 312

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM------------------------I 146
           +  G +  VVT+ +LI+  C +G + KALN+ + M                        I
Sbjct: 313 LRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGI 372

Query: 147 DKGIE-----------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           D+ IE           P +V Y IL+  LC + K+ +A  +   +   G  P+L +YN +
Sbjct: 373 DRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 432

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG  KV     A+E   EM +  L+P+++T   ++ GL + G++R A  FF ++ +F +
Sbjct: 433 IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAI 492

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN F+YN +I G CK+     A+   ++M      P   TY  LIKG+   G  E A  
Sbjct: 493 RPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASK 552

Query: 316 LLQKMYKEGIL 326
           L  ++Y  G++
Sbjct: 553 LSNELYSRGLV 563


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 259/542 (47%), Gaps = 30/542 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N S F+  + +    G  E+A  V R++     +P     + +LN L    K +  + 
Sbjct: 448 KINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   GLVADV TY +++D  C  G + +A   F+EM + G  P VV YT LIH   
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML--------- 216
              K+  A  +F +M   G +PN+ TY+AL+DG+CK   V +A + +  M          
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 217 -------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                   ++ +PNVVT+G L+DG CK   +  A      M+  G  PN  VY+ LIDG 
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G L EA  + +EM +      ++TY+ LI     V + + A  +L KM +     NV
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y  +IDG CK G  ++A  +   M EKG +PNVVT++++IDG    G I+  + L   
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K + P+ V +  LID   K+G +     L +EM +            +I G  K   
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 864

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--SDNLRPD 507
            S  L   L++  + D    +P   +Y  +I  L    ++  A +L  ++   S  L   
Sbjct: 865 ESLGL---LDEIGQDDT---APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           + TY +++  L  A ++     L ++M K G++P+      +++G   N  +  A    +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978

Query: 568 FL 569
           F+
Sbjct: 979 FI 980



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 259/542 (47%), Gaps = 31/542 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGK------FD 101
           +P +F++L+ A+   G    A  + +K+     +P     N L+  +            D
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y EM+  G+V + +       C C  G   KA ++  EMI +G  P    Y+ ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + LCN +KM  A  +F  M+  G+V ++YTY  ++D +CK   + +A ++++EM      
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NL 275
           PNVVT+  L+    K  ++  A   F  M   G  PNI  Y+ LIDGHCKAG       +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 276 FEAMSLCSEMEKFEI----------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           FE M    ++   ++           P+V TY  L+ G C   ++E A  LL  M  EG 
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N + Y++LIDG CK G +++A  V ++M+E G    + T+SSLID   K    D A  
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+  S  P+VV++T +IDGL K G   E  +L + M E    P+V T +++I G  
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G+I       LE  ++      +PN+V Y  +I   C +G +  A  L  +M+  +  
Sbjct: 791 MIGKIETC----LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
                Y  ++ G    K  ++ + LL ++ +    P   + ++++    +   L+ A R 
Sbjct: 847 THTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904

Query: 566 SE 567
            E
Sbjct: 905 LE 906



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 255/562 (45%), Gaps = 37/562 (6%)

Query: 41  ALNSLEIPKFNP-SVFST-LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLI 95
           AL  +E   F P +VF T LI    E    EEA   L   R    LP +   + LL G +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            K +          M++ G       +  L+   C  GD   A  L  +M+  G  P  V
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408

Query: 156 IYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +Y ILI  +C +   +       AE  +  M   GVV N    ++     C      +A 
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM+     P+  T+  +++ LC   ++  A   F  M + G+  +++ Y  ++D  
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG + +A    +EM +   +P+V TY  LI       ++  A  L + M  EG L N+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPNVVTFSSLIDG 373
           VTY++LIDG+CK G +EKA  +  +M                 +    PNVVT+ +L+DG
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+  ++ A  L   M ++   P+ +V+ ALIDGL K G + E   +  EM E     +
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 434 VFTVSSLIHGLFKNGR---ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           ++T SSLI   FK  R    S  L+  LE +       C+PN V+Y  +I  LC  G+  
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------CAPNVVIYTEMIDGLCKVGKTD 761

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A KL   M     +P+  TYT M+ G     ++   + LL  M   G+ P+ V  +V++
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
               +NG L  A    E +K++
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQT 843



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 243/569 (42%), Gaps = 71/569 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           IA  E+G +++  + +R     P+    N L+   +K  + DS    + EM L  L  D 
Sbjct: 218 IALEELGRLKD--FRFR-----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 270

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T        C  G   +AL L +    +   P  V YT LI GLC  +   EA      
Sbjct: 271 FTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNR 327

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY+ L+ G      + R     + M+     P+   F  L+   C  G+
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDG------------------------------- 268
              A      M K G  P   VYN LI                                 
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447

Query: 269 ----------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
                      C AG   +A S+  EM      PD  TY+ ++  LC   ++E A  L +
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G++A+V TY  ++D +CK G +E+A    ++M E G  PNVVT+++LI    KA 
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT------- 431
            +  A  L+  M+ +  +P++V ++ALIDG  K G +++  ++++ M  +K         
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 432 ---------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
                    P+V T  +L+ G  K+ R+  A        D      C PN ++Y A+I  
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL----DAMSMEGCEPNQIVYDALIDG 683

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G++ +A ++ ++M          TY++++    + KR      +L+ M++    P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            VI   M+ G  + G    A++  + ++E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 200/533 (37%), Gaps = 99/533 (18%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+D      D         ++ D   E       +L+   C       A      ++
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           +    P+  TYN L+  + K   ++ A   + EM   NL+ +  T       LCKVG+ R
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V    F   P+   Y  LI G C+A    EAM   + M      P+V TY+ L+
Sbjct: 288 EALT-LVETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL------------ 349
            G     QL   + +L  M  EG   +   +NSL+  YC  GD   A             
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 350 -----------SVC------------------SQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                      S+C                  S+M   GV  N +  SS     C AG  
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 381 DAAMGLYTEMVIKSLVPD-----------------------------------VVVFTAL 405
           + A  +  EM+ +  +PD                                   V  +T +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D   K G +++  + + EM E   TP+V T ++LIH   K  ++S A   F  +T  ++
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF--ETMLSE 582

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM----------------RSDNLRPDNC 509
           G  C PN V Y+A+I   C  GQ+ KA ++F  M                  ++ RP+  
Sbjct: 583 G--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY  +L G  ++ R+ +   LL  M   G  P+ ++   ++ G  + G L  A
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 173/455 (38%), Gaps = 77/455 (16%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R+ G       YNAL+D   +  D     EF  ++   + +       VL+   C+ G  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGH------------------------------- 269
             A      +  F   P+   YNCLI                                  
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276

Query: 270 ----CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
               CK G   EA++L  E E F   PD   Y  LI GLC     E A   L +M     
Sbjct: 277 AYSLCKVGKWREALTLV-ETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           L NVVTY++L+ G   +  + +   V + M  +G  P+   F+SL+   C +G+   A  
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN------MKETLRLYKEMLEAKITPSVFTVSS 439
           L  +MV    +P  VV+  LI  +  D +      +    + Y EML A +  +   VSS
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453

Query: 440 LIHGLFKNGRISNA----------------------LNF----------FLEKTDKTDGG 467
               L   G+   A                      LN+          FL   +   GG
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             +  +  Y  ++ + C  G I +A K F++MR     P+  TYT ++   L+AK++   
Sbjct: 514 LVADVYT-YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L   M+  G +P+ V    ++ G+ + G ++ A
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 243/530 (45%), Gaps = 41/530 (7%)

Query: 59  IIAFSEMGHIEEALWVYRKIE-----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           I AF+  G  + AL  + +         P ++  N LL+ L+++    +V   Y+ M   
Sbjct: 97  ICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKA 156

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+  +V TY +LI   C    V  A  + DEM  KG  P  V +T +I  LC  +++ EA
Sbjct: 157 GVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEA 216

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +   M   G      +YNA++   C    +        EM+H  L+P+ V +  ++  
Sbjct: 217 RGILAEMTPVGA-----SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGA 271

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            CK  ELR A      M   G  PN+  +  L+ G    G + +A+ + + M     +P 
Sbjct: 272 FCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPS 331

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +YN+LI+GLC +G L+ A  +   M K   L +V TY++LIDG+ K GD++ A+S+ +
Sbjct: 332 TISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN 391

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            MT  G +PNVV +++++D  CK    D A  L  +M +++  P+ + F  LI  L   G
Sbjct: 392 DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLG 451

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE-----------KTD 462
                L ++  M      P+  T + L+HGLF+ G   +AL    E             +
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYN 511

Query: 463 KTDGGYC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            T  G C                     P+   + AII A C +G +  A+ +   M + 
Sbjct: 512 TTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           N   +   YT+++ GL    ++ D M+ L  M+  GI P+     V+VRG
Sbjct: 572 NCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRG 621



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 232/513 (45%), Gaps = 42/513 (8%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG---QGDVMKALNL 141
           +A  A +  L   G  D V    +EM L G+       G L+   C     G   +AL  
Sbjct: 56  RAHEATVRRLAAAGDLDGVQYTLQEMRLRGVAC---PEGALVAAICAFARAGAADRALKT 112

Query: 142 F-DEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           F     D G   PTV +Y  L+  L  EN +     ++ +MR+ GV PN+YTYN L+   
Sbjct: 113 FYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKAL 172

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR-------------AAGNF 246
           C+   V  A     EM     +P+ V+   ++  LCK+  L              A+ N 
Sbjct: 173 CQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNA 232

Query: 247 FVH-----------------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            VH                 M   G+ P+   Y  ++   CKA  L  A ++ + M    
Sbjct: 233 VVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEG 292

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P+V T+ +L+KG    G++  A G+   M  EG   + ++YN LI G C  GD+++AL
Sbjct: 293 CVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRAL 352

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V S M +    P+V T+S+LIDG  KAG++D AM ++ +M      P+VVV+T ++D L
Sbjct: 353 FVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVL 412

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K     +   L  +M      P+  T ++LI  L   GR   ALN F           C
Sbjct: 413 CKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYG----C 468

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y  ++  L  +G    A ++ ++M +        +Y T + GL + + + + M+
Sbjct: 469 PPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMI 528

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           LL  MI  GI PDA     ++  Y + G++++A
Sbjct: 529 LLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAA 561



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 214/428 (50%), Gaps = 6/428 (1%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           +T+I A  ++  ++EA  +    E+ P   + NA+++ L  + +   V+   +EMV  GL
Sbjct: 201 TTIISALCKLDRLDEARGIL--AEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGL 258

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
             D V Y  ++   C   ++  A  +   M+ +G  P V  +T+L+ G  ++ K+ +A  
Sbjct: 259 RPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALG 318

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           M+  M   G  P+  +YN L+ G C + D+ RAL  +  M   +  P+V T+  L+DG  
Sbjct: 319 MWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFS 378

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G+L  A + +  M   G  PN+ VY  ++D  CK     +A +L  +M      P+  
Sbjct: 379 KAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTL 438

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           T+N LI+ LC +G+   A  +   M + G   N  TYN L+ G  +EG+ E AL + ++M
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEM 498

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G E ++V++++ I G C+   I  AM L   M+I+ + PD   F A+I    K+GN+
Sbjct: 499 LNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNV 558

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +    +   M       ++   +SL+ GL    ++ +A+ + L+   +   G C PN   
Sbjct: 559 RAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYE---GIC-PNEAT 614

Query: 476 YAAIIQAL 483
           +  +++ +
Sbjct: 615 WNVLVRGI 622



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 185/366 (50%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   A  +++    K  +          MV  G V +V T+ VL+      G V  AL +
Sbjct: 260 PDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGM 319

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           ++ M+ +G  P+ + Y +LI GLC+   +  A  +F  M +   +P++ TY+ L+DG+ K
Sbjct: 320 WNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSK 379

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             D++ A+  +++M +   +PNVV +  ++D LCK      A N    M+     PN   
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N LI   C  G    A+++   M ++   P+  TYN L+ GL   G  E A  +L +M 
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEML 499

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   ++V+YN+ I G C+   +++A+ +  +M  +G++P+  TF+++I   CK GN+ 
Sbjct: 500 NHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVR 559

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           AA  +   M   +   ++V +T+L+ GL     + + +    +ML   I P+  T + L+
Sbjct: 560 AAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLV 619

Query: 442 HGLFKN 447
            G+F +
Sbjct: 620 RGIFTH 625



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 16/395 (4%)

Query: 174 ESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           ++ +R+  + G   P +  YN L+D   +   V   +  Y  M    ++PNV T+ +L+ 
Sbjct: 111 KTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIK 170

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC+   + AA      MA+ G  P+   +  +I   CK   L EA  + +EM     +P
Sbjct: 171 ALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TP 225

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
              +YN ++  LCG  ++     ++ +M   G+  + V Y S++  +CK  ++  A ++ 
Sbjct: 226 VGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAIL 285

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  +G  PNV TF+ L+ G    G +  A+G++  MV +   P  + +  LI GL   
Sbjct: 286 ARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHI 345

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G++K  L ++  M ++   P V T S+LI G  K G +  A++ +    D T+ G C PN
Sbjct: 346 GDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIW---NDMTNAG-CKPN 401

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL---RAKRMLDVMM 529
            V+Y  ++  LC      +A  L   M  +N  P+  T+ T++R L    RA R L+V  
Sbjct: 402 VVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNV-- 459

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
               M + G  P+      ++ G    G+ + A R
Sbjct: 460 -FHGMRRYGCPPNDRTYNELLHGLFREGNCEDALR 493



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 32/285 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            +STLI  FS+ G ++ A+                             S+W    +M   
Sbjct: 369 TYSTLIDGFSKAGDLDVAM-----------------------------SIW---NDMTNA 396

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   +VV Y  ++D  C +    +A NL D+M  +   P  + +  LI  LC+  +   A
Sbjct: 397 GCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRA 456

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            ++F  MR  G  PN  TYN L+ G  +  +   AL    EML+H  + ++V++   + G
Sbjct: 457 LNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISG 516

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC++  ++ A      M   G+ P+ F +N +I  +CK GN+  A  +   M+      +
Sbjct: 517 LCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRN 576

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           +  Y  L+ GLC   +L+ A   L KM  EGI  N  T+N L+ G
Sbjct: 577 IVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRG 621


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 230/478 (48%), Gaps = 7/478 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDS 102
            +P  N   ++TLI A+   G +  +   L    +    P   A  + + G  + G    
Sbjct: 66  RMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAH 125

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
               +  M L G V    TY  L+   CG G V +A+++F  M   G  P   +Y  ++H
Sbjct: 126 ACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVH 185

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC   +  EAE++       G  PN+  YNAL+DGYC V D+  A++ +  M  +   P
Sbjct: 186 GLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSP 245

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NV T+  L+ G CK  +L  A   F  M   G+ PN+  Y  LI G C  G L  A  L 
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             ME   + P+ +T ++LI  LC   ++  A+ LL  + ++GI  N + Y SLIDG CK 
Sbjct: 306 QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G    A  +   +  +G  P+  T+SSLIDG C+   +  AM +  +M+ K + P  V +
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T +ID L ++     + ++  +M+ A I P VFT +  +      GR+ +A +  L   D
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVD 485

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
               G C PN V Y A+I      G   +A   F  M ++  +P+  +YT +LR L++
Sbjct: 486 H---GVC-PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 211/476 (44%), Gaps = 8/476 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA L  L +      +  F   M       ++ TY  LI+  C  GD+  +      ++ 
Sbjct: 45  NAFLMALARHRMLADMESFASRMP----ARNLRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P    YT  + G C    +  A  +F  M   G V   +TY AL+ G C    V  
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+  +  M      P+   +  ++ GLC  G  R A          G  PN+ VYN LID
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+C  G+L  A+ +   M+    SP+V TY  LI G C   +L+ A  L  +M   G++ 
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVTY +LI G C +G ++ A  +   M   G+ PN  T S LID  CK   +  A  L 
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             ++ K +  + +V+T+LIDGL K G      RL + ++     P   T SSLI GL + 
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             +S A+    +  +K       P+ V Y  II  L  +     + K+   M +  ++PD
Sbjct: 401 KELSEAMLVLDDMMEKG----VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             TYT  +R      RM D   ++  M+  G+ P+ V    ++ GY   G    AF
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 244/568 (42%), Gaps = 58/568 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           +P V++T++      G   EA  +          P +   NAL++G    G  +   + +
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M + G   +V TY  LI   C    + +A+ LF  M+D G+ P VV YT LI G C++
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  + +SM   G+VPN +T + L+D  CK   V  A      ++   ++ N + +
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-E 286
             L+DGLCK G   AA      +   G  P+   Y+ LIDG C+   L EAM +  +M E
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415

Query: 287 K----------------------------------FEISPDVFTYNILIKGLCGVGQLEG 312
           K                                    I PDVFTY I ++  C  G++E 
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMED 475

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           AE ++  M   G+  N+VTYN+LI GY   G   +A S    M   G +PN  +++ L+ 
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535

Query: 373 GQCK---AGNIDA-------------AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
              K   + NI A               GL  EMV   L  ++ ++   +  L +   + 
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L  EM  A +TPS    +S+I    +   ++ AL F          GY  P    Y
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV---DSMVKSGYI-PQLESY 651

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             II +LC +G I  A ++F DM S     +   +  ++ GLL+   + +   LL+ M +
Sbjct: 652 RHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE 711

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFR 564
               P   +   +     +  D++   R
Sbjct: 712 KNYRPSDALYARLTGKITDANDIQEIAR 739



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 240/524 (45%), Gaps = 15/524 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+      G + EA+ V+  ++     P       +++GL   G+         + 
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   +VV Y  LID  C  GD+  A+++F+ M   G  P V  YT LI G C   K+
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M + G+VPN+ TY AL+ G C    ++ A      M +  L PN  T  VL
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK   +  A      + + G+  N  VY  LIDG CKAG    A  L   +     
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TY+ LI GLC   +L  A  +L  M ++G+  + VTY  +ID   +E   + +  
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   G++P+V T++  +   C  G ++ A  +   MV   + P++V + ALI G +
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK----NGRISNALNFFLEKTDKTDG 466
             G   +    +K M+     P+  + + L+  L K    N   +N+++ +     K   
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563

Query: 467 GYCS-------PNHV-LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           G          P+ + +Y   + +LC   ++ +A  L  +M+S NL P    YT+++   
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACC 623

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            R K + + +  +  M+K G +P     + ++    E G +++A
Sbjct: 624 CRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 4/312 (1%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+  Y  LI+ +C AG+L  +    S + +   +PD   Y   + G C  G L  A  L 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M   G +    TY +L+ G C  G + +A+SV + M   G  P+   +++++ G C A
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G    A  L ++ + +   P+VVV+ ALIDG    G+++  + +++ M     +P+V T 
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G  K+ ++  A+  F   +   D G   PN V Y A+IQ  C DGQ+  A +L  
Sbjct: 251 TELISGFCKSRKLDRAMMLF---SRMVDAGLV-PNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M +  L P+  T + ++  L + +R+ +  +LL  +I+ GI  + ++   ++ G  + G
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366

Query: 558 DLKSAFRCSEFL 569
              +A R  + L
Sbjct: 367 RFAAADRLMQTL 378



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+ TY +LI+ YC  GD+  +    S +   G  P+   ++S + G C+AG +  A  L+
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M ++  V     +TAL+ GL   G ++E + ++  M      P     ++++HGL   
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR   A       +D    G+  PN V+Y A+I   C  G +  A  +F  M  +   P+
Sbjct: 191 GRTREAETLL---SDAMAEGF-EPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TYT ++ G  +++++   MML + M+  G+VP+ V    +++G   +G L  A+R  +
Sbjct: 247 VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 568 FLKESRIGSSE 578
            ++ S +  +E
Sbjct: 307 SMENSGLVPNE 317



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 73/201 (36%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA 89
           KP+   Y+V   L   +    N    S  I   +EM ++   L    K+++   I   N 
Sbjct: 524 KPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNC 583

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
            L  L +  + D       EM    L      Y  +I CCC    + +AL   D M+  G
Sbjct: 584 FLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSG 643

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P +  Y  +I  LC E  +  A+ +F  M           +  L+DG  +   V    
Sbjct: 644 YIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECS 703

Query: 210 EFYHEMLHHNLQPNVVTFGVL 230
                M   N +P+   +  L
Sbjct: 704 SLLSVMEEKNYRPSDALYARL 724


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 257/516 (49%), Gaps = 11/516 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    +   + +AL ++   ++    P ++A   L++GL K G+       +
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G+V  V+TY  +I      G +  AL + + M   G  P    Y  LI+GLC++
Sbjct: 197 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 256

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EAE +  +  + G  P + T+  L++GYC     + AL   ++M+    + ++  F
Sbjct: 257 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L++ L K   L+ A      ++  G+ PN+  Y  +IDG+CK+G +  A+ +   ME+
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ +TYN L+ GL    +L  A  LL KM K+GI+ NV+TY +L+ G C E D + 
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M + G++P+   ++ L D  CKAG  + A   Y+ +V K +    V +T LID
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLID 492

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G SK GN      L + M++   TP  +T S L+H L K  R++ AL    + + +  G 
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR--GI 550

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C+     Y  +I  +  +G+   A +++++M S   +P   TYT  +    +  R+ D 
Sbjct: 551 KCTI--FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 608

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             L+  M + G+ PD V   +++ G    G +  AF
Sbjct: 609 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 228/471 (48%), Gaps = 8/471 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L +    + +   Y ++V  GL+ D VTY  +I   C +GD+  A   F  +++
Sbjct: 37  NFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLE 96

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+EP       L+ G C   ++ +A  +F  M   G   N Y+Y  L+ G C    V +
Sbjct: 97  GGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRK 156

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL  +  M      PNV  F  L+ GLCK G +  A   F  M + GV P++  YN +I 
Sbjct: 157 ALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIV 216

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+ K G + +A+ +   MEK    PD +TYN LI GLC   + E AE LL    KEG   
Sbjct: 217 GYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTP 275

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            VVT+ +LI+GYC     + AL + ++M     + ++  F  LI+   K   +  A  L 
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 335

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+    LVP+V+ +T++IDG  K G +   L + K M      P+ +T +SL++GL K+
Sbjct: 336 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 395

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            ++  A+   L K  K DG    PN + Y  ++Q  C +     A +LF  M  + L+PD
Sbjct: 396 KKLHKAMA-LLTKMQK-DG--IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
              Y  +   L +A R  +    +   ++ G+    V    ++ G+ + G+
Sbjct: 452 EHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGN 499



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 237/489 (48%), Gaps = 11/489 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I ++ + G +  A   +R +    + P    CNAL+ G  + G+       +  M
Sbjct: 70  TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            L G   +  +Y +LI   C    V KAL LF  M   G  P V  +T LI GLC   ++
Sbjct: 130 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 189

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F +M + GVVP++ TYNA++ GY K+  +N AL+    M  +   P+  T+  L
Sbjct: 190 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 249

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC   +   A     +  K G  P +  +  LI+G+C A    +A+ + ++M   + 
Sbjct: 250 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 308

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D+  +  LI  L    +L+ A+ LL ++   G++ NV+TY S+IDGYCK G ++ AL 
Sbjct: 309 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 368

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M   G +PN  T++SL+ G  K   +  AM L T+M    ++P+V+ +T L+ G  
Sbjct: 369 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 428

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
            + +     RL++ M +  + P     + L   L K GR   A +F + K         +
Sbjct: 429 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG-------VA 481

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
              V Y  +I      G    A+ L   M  +   PD+ TY+ +L  L + KR+ + + +
Sbjct: 482 LTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPI 541

Query: 531 LADMIKMGI 539
           L  M   GI
Sbjct: 542 LDQMSLRGI 550



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 239/515 (46%), Gaps = 31/515 (6%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN+     F P+V  F+ LI  +      ++AL +  K+   +    +Q    L+N LIK
Sbjct: 265 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 324

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           K +     E   E+   GLV +V+TY  +ID  C  G V  AL +   M   G +P    
Sbjct: 325 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 384

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  L++GL  + K+ +A ++   M++ G++PN+ TY  L+ G C   D + A   +  M 
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 444

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + L+P+   + VL D LCK G    A +F V   + GV      Y  LIDG  KAGN  
Sbjct: 445 QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTD 501

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A +L   M     +PD +TY++L+  LC   +L  A  +L +M   GI   +  Y  LI
Sbjct: 502 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 561

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D   +EG  + A  + ++MT  G +P+  T++  I+  CK G ++ A  L  +M  + + 
Sbjct: 562 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 621

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDVV +  LIDG    G +       K M+ A   P+ +T   L+  L K        N 
Sbjct: 622 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG-------NL 674

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
              ++  T G        ++  I   + +        +L   M    L P   TY++++ 
Sbjct: 675 AYVRSVDTSG--------MWNLIELDITW--------QLLERMVKHGLNPTVTTYSSLIA 718

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           G  +A R+ +  +LL  M   G+ P+  I  ++++
Sbjct: 719 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 753



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 197/395 (49%), Gaps = 5/395 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G++P+  TYN ++  YCK  D+  A  ++  +L   L+P   T   L+ G C+ GELR A
Sbjct: 63  GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F+ M   G   N + Y  LI G C A  + +A+ L   M++   SP+V  +  LI G
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC  G++  A  L   M + G++ +V+TYN++I GY K G M  AL +   M + G  P+
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
             T+++LI G C     + A  L    V +   P VV FT LI+G        + LR+  
Sbjct: 243 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+ +K    +     LI+ L K  R+  A        ++       PN + Y +II   
Sbjct: 302 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL----NEISANGLVPNVITYTSIIDGY 357

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G++  A ++   M  D  +P+  TY +++ GL++ K++   M LL  M K GI+P+ 
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           +    +++G  +  D  +AFR  E ++++ +   E
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 230/528 (43%), Gaps = 31/528 (5%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +      P+V  ++++I  + + G ++ AL V + +E     P     N+L+ GL+K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K         +M   G++ +V+TY  L+   C + D   A  LF+ M   G++P    
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +L   LC   +  EA S    +R+ GV      Y  L+DG+ K  + + A      M+
Sbjct: 455 YAVLTDALCKAGRAEEAYSFI--VRK-GVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 511

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P+  T+ VL+  LCK   L  A      M+  G+   IF Y  LID   + G   
Sbjct: 512 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 571

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  + +EM      P   TY + I   C  G+LE AE L+ KM +EG+  +VVTYN LI
Sbjct: 572 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 631

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG    G +++A S   +M     EPN  T+  L+    K GN+     + T  +   + 
Sbjct: 632 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIE 690

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D+                  T +L + M++  + P+V T SSLI G  K GR+  A   
Sbjct: 691 LDI------------------TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 732

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                D   G   SPN  +Y  +I+  C      KA    S M     +P   +Y  ++ 
Sbjct: 733 L----DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 788

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           GL        V  L  D++++G   D V  +++  G  + G +   F+
Sbjct: 789 GLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 836



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 197/445 (44%), Gaps = 24/445 (5%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VL 81
           L+K +K H     +        IP  N   ++TL+    +    + A  ++  +E   + 
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIP--NVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 449

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P   A   L + L K G+ +  + F   +V  G+    V Y  LID     G+   A  L
Sbjct: 450 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 506

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + MID+G  P    Y++L+H LC + ++ EA  +   M   G+   ++ Y  L+D   +
Sbjct: 507 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 566

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + A   Y+EM     +P+  T+ V ++  CK G L  A +  + M + GV P++  
Sbjct: 567 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 626

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK----------------GLC 305
           YN LIDG    G +  A S    M      P+ +TY +L+K                G+ 
Sbjct: 627 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 686

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            + +L+    LL++M K G+   V TY+SLI G+CK G +E+A  +   M  KG+ PN  
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 746

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            ++ LI   C     + A+   + M      P +  +  L+ GL  +G+ ++   L+ ++
Sbjct: 747 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 806

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRI 450
           LE            L  GL K G +
Sbjct: 807 LELGYNHDEVAWKILNDGLLKAGYV 831



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 182/410 (44%), Gaps = 22/410 (5%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEAL-WVYRKIEV 80
            LL+ +   H   + F     +E     P    ++ L  A  + G  EEA  ++ RK   
Sbjct: 422 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVA 481

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L  +     L++G  K G  D      E M+  G   D  TY VL+   C Q  + +AL 
Sbjct: 482 LTKVYY-TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 540

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D+M  +GI+ T+  YTILI  +  E K   A+ M+  M   G  P+  TY   ++ YC
Sbjct: 541 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 600

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A +   +M    + P+VVT+ +L+DG   +G +  A +    M      PN +
Sbjct: 601 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 660

Query: 261 VYNCLIDGHCKAGNLFEAMS-----------------LCSEMEKFEISPDVFTYNILIKG 303
            Y CL+  H   GNL    S                 L   M K  ++P V TY+ LI G
Sbjct: 661 TY-CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 719

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G+LE A  LL  M  +G+  N   Y  LI   C     EKALS  S M+E G +P 
Sbjct: 720 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 779

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           + ++  L+ G C  G+ +    L+ +++      D V +  L DGL K G
Sbjct: 780 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 7/278 (2%)

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  +SP    YN  ++ L      E    +  ++ ++G+L + VTYN++I  YCKEGD+ 
Sbjct: 28  RLALSPKC--YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLT 85

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A      + E G+EP   T ++L+ G C+ G +  A  L+  M +     +   +T LI
Sbjct: 86  TAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 145

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL     +++ L L+  M     +P+V   + LI GL K+GR+ +A   F    D    
Sbjct: 146 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQ 201

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ + Y A+I      G++  A K+   M  +   PD+ TY T++ GL   K   +
Sbjct: 202 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTE-E 260

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              LL + +K G  P  V    ++ GY        A R
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 298



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 16/267 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+       +N   K+G+ +   +   +M   G+  DVVTY +LID C   G + +A + 
Sbjct: 587 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 646

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN----KMVEAESMF------------RSMRECGV 185
              M+    EP    Y +L+  L   N    + V+   M+              M + G+
Sbjct: 647 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 706

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P + TY++L+ G+CK   +  A      M    L PN   + +L+   C       A +
Sbjct: 707 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 766

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           F   M++ G  P +  Y  L+ G C  G+  +  SL  ++ +   + D   + IL  GL 
Sbjct: 767 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLL 826

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTY 332
             G ++    +L  M K     +  TY
Sbjct: 827 KAGYVDICFQMLSIMEKRYCCISSQTY 853



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 21/284 (7%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--- 79
           + +L+  K  H    ++N + S    K + + ++  I ++ + G +E+A  +  K+E   
Sbjct: 562 DEMLREGKHDHA-KRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC----------- 128
           V P +   N L++G    G  D  +   + MV      +  TY +L+             
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679

Query: 129 --CCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
               G  ++++      L + M+  G+ PTV  Y+ LI G C   ++ EA  +   M   
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ PN   Y  L+   C      +AL F   M     QP + ++ +L+ GLC  G+    
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 799

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            + F  + + G   +   +  L DG  KAG +     + S MEK
Sbjct: 800 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEK 843


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 259/542 (47%), Gaps = 30/542 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N S F+  + +    G  E+A  V R++     +P     + +LN L    K +  + 
Sbjct: 407 KINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 463

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   GLVADV TY +++D  C  G + +A   F+EM + G  P VV YT LIH   
Sbjct: 464 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 523

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML--------- 216
              K+  A  +F +M   G +PN+ TY+AL+DG+CK   V +A + +  M          
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583

Query: 217 -------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                   ++ +PNVVT+G L+DG CK   +  A      M+  G  PN  VY+ LIDG 
Sbjct: 584 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G L EA  + +EM +      ++TY+ LI     V + + A  +L KM +     NV
Sbjct: 644 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 703

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V Y  +IDG CK G  ++A  +   M EKG +PNVVT++++IDG    G I+  + L   
Sbjct: 704 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 763

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K + P+ V +  LID   K+G +     L +EM +            +I G  K   
Sbjct: 764 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 823

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--SDNLRPD 507
            S  L   L++  + D    +P   +Y  +I  L    ++  A +L  ++   S  L   
Sbjct: 824 ESLGL---LDEIGQDD---TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 877

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           + TY +++  L  A ++     L ++M K G++P+      +++G   N  +  A    +
Sbjct: 878 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937

Query: 568 FL 569
           F+
Sbjct: 938 FI 939



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 260/542 (47%), Gaps = 31/542 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL------IKKGKFD 101
           +P +F++L+ A+   G    A  + +K+     +P     N L+  +      +     D
Sbjct: 330 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLD 389

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y EM+  G+V + +       C C  G   KA ++  EMI +G  P    Y+ ++
Sbjct: 390 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 449

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           + LCN +KM  A  +F  M+  G+V ++YTY  ++D +CK   + +A ++++EM      
Sbjct: 450 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 509

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NL 275
           PNVVT+  L+    K  ++  A   F  M   G  PNI  Y+ LIDGHCKAG       +
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 569

Query: 276 FEAMSLCSEMEKFEI----------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           FE M    ++   ++           P+V TY  L+ G C   ++E A  LL  M  EG 
Sbjct: 570 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N + Y++LIDG CK G +++A  V ++M+E G    + T+SSLID   K    D A  
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+  S  P+VV++T +IDGL K G   E  +L + M E    P+V T +++I G  
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G+I       LE  ++      +PN+V Y  +I   C +G +  A  L  +M+  +  
Sbjct: 750 MIGKIETC----LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 805

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
                Y  ++ G    K  ++ + LL ++ +    P   + ++++    +   L+ A R 
Sbjct: 806 THTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 863

Query: 566 SE 567
            E
Sbjct: 864 LE 865



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/562 (28%), Positives = 253/562 (45%), Gaps = 37/562 (6%)

Query: 41  ALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLI 95
           AL  +E   F P    ++ LI    E    EEA   L   R    LP +   + LL G +
Sbjct: 248 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 307

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            K +          M++ G       +  L+   C  GD   A  L  +M+  G  P  V
Sbjct: 308 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 367

Query: 156 IYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +Y ILI  +C +   +       AE  +  M   GVV N    ++     C      +A 
Sbjct: 368 VYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM+     P+  T+  +++ LC   ++  A   F  M + G+  +++ Y  ++D  
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 487

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG + +A    +EM +   +P+V TY  LI       ++  A  L + M  EG L N+
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPNVVTFSSLIDG 373
           VTY++LIDG+CK G +EKA  +  +M                 +    PNVVT+ +L+DG
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 607

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK+  ++ A  L   M ++   P+ +V+ ALIDGL K G + E   +  EM E     +
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667

Query: 434 VFTVSSLIHGLFKNGR---ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           ++T SSLI   FK  R    S  L+  LE +       C+PN V+Y  +I  LC  G+  
Sbjct: 668 LYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------CAPNVVIYTEMIDGLCKVGKTD 720

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A KL   M     +P+  TYT M+ G     ++   + LL  M   G+ P+ V  +V++
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
               +NG L  A    E +K++
Sbjct: 781 DHCCKNGALDVAHNLLEEMKQT 802



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 243/569 (42%), Gaps = 71/569 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           IA  E+G +++  + +R     P+    N L+   +K  + DS    + EM L  L  D 
Sbjct: 177 IALEELGRLKD--FRFR-----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 229

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T        C  G   +AL L +    +   P  V YT LI GLC  +   EA      
Sbjct: 230 FTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNR 286

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY+ L+ G      + R     + M+     P+   F  L+   C  G+
Sbjct: 287 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 346

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDG------------------------------- 268
              A      M K G  P   VYN LI                                 
Sbjct: 347 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLN 406

Query: 269 ----------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
                      C AG   +A S+  EM      PD  TY+ ++  LC   ++E A  L +
Sbjct: 407 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G++A+V TY  ++D +CK G +E+A    ++M E G  PNVVT+++LI    KA 
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 526

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT------- 431
            +  A  L+  M+ +  +P++V ++ALIDG  K G +++  ++++ M  +K         
Sbjct: 527 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 586

Query: 432 ---------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
                    P+V T  +L+ G  K+ R+  A        D      C PN ++Y A+I  
Sbjct: 587 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL----DAMSMEGCEPNQIVYDALIDG 642

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC  G++ +A ++ ++M          TY++++    + KR      +L+ M++    P+
Sbjct: 643 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 702

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            VI   M+ G  + G    A++  + ++E
Sbjct: 703 VVIYTEMIDGLCKVGKTDEAYKLMQMMEE 731



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 200/533 (37%), Gaps = 99/533 (18%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+D      D         ++ D   E       +L+   C       A      ++
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLK 186

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           +    P+  TYN L+  + K   ++ A   + EM   NL+ +  T       LCKVG+ R
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 246

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V    F   P+   Y  LI G C+A    EAM   + M      P+V TY+ L+
Sbjct: 247 EALT-LVETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL------------ 349
            G     QL   + +L  M  EG   +   +NSL+  YC  GD   A             
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 363

Query: 350 -----------SVC------------------SQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                      S+C                  S+M   GV  N +  SS     C AG  
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423

Query: 381 DAAMGLYTEMVIKSLVPD-----------------------------------VVVFTAL 405
           + A  +  EM+ +  +PD                                   V  +T +
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +D   K G +++  + + EM E   TP+V T ++LIH   K  ++S A   F  +T  ++
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF--ETMLSE 541

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM----------------RSDNLRPDNC 509
           G  C PN V Y+A+I   C  GQ+ KA ++F  M                  ++ RP+  
Sbjct: 542 G--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 599

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY  +L G  ++ R+ +   LL  M   G  P+ ++   ++ G  + G L  A
Sbjct: 600 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 652



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 164/398 (41%), Gaps = 15/398 (3%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R+ G       YNAL+D   +  D     EF  ++   + +       VL+   C+ G  
Sbjct: 116 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSF 175

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      +  F   P+   YNCLI    KA  L  A  +  EM    +  D FT    
Sbjct: 176 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 235

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
              LC VG+   A  L++    E  + + V Y  LI G C+    E+A+   ++M     
Sbjct: 236 AYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 292

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            PNVVT+S+L+ G      +     +   M+++   P   +F +L+      G+     +
Sbjct: 293 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 352

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP-------NH 473
           L K+M++    P     + LI  +  +    ++LNF L   D  +  Y          N 
Sbjct: 353 LLKKMVKCGHMPGYVVYNILIGSICGD---KDSLNFDL--LDLAEKAYSEMLAAGVVLNK 407

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           +  ++  + LC  G+  KA  +  +M      PD  TY+ +L  L  A +M    +L  +
Sbjct: 408 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M + G+V D     +MV  + + G ++ A +    ++E
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 173/569 (30%), Positives = 258/569 (45%), Gaps = 26/569 (4%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMG 66
           NA LY + R  +      LL+S +P  V Y++                   L+ A S+  
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSSRPTTVAYNI-------------------LLAALSDHA 117

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVL 125
           H    L    K  V       N LL GL + G+ D+     +     G+ A DV+ +  L
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNTL 175

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C  GD   AL++ D M  +G+   VV Y  L+ G C   ++  A  +   M+E GV
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            PN+ TY   +  YC+   V  A + Y  M+ + +  +VVT   L+ GLC+ G    A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M K G  PN   Y  LID   KAG   E +SL  EM    +  D+ TY  L+  L 
Sbjct: 296 LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+ +  +  L+    + +  N VTY  LID  CK  ++++A  V  +M EK + PNVV
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TFSS+I+G  K G +D A      M  + + P+VV +  LIDG  K       L +Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           L   +  + F V SL++GL +NG+I  A+  F + +    G   S +HV Y  +I  L  
Sbjct: 476 LCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDAS----GSGLSLDHVNYTTLIDGLFK 531

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A K   ++   N+ PD   Y   +  L    +  +   +L +M  MG+ PD   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQST 591

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              M+  +   G+   A +    +K S I
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSI 620



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 259/553 (46%), Gaps = 42/553 (7%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI A  +  +++EA  V  ++E   + P +   ++++NG +K+G  D   E+
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   G+  +VVTYG LID          AL ++ +M+ +G+E    I   L++GL  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ EA ++F+     G+  +   Y  L+DG  K  D+  A +F  E++  N+ P+ V 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + V ++ LC +G+ + A +    M   G+ P+   YN +I  HC+ G   +A+ L  EM+
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG---------------------- 324
              I P++ TYN L+ GL G G +E A+ LL +M   G                      
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 325 -------------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
                        + A++  YN+L+   C  G   KA  V  +M   G+ P+ +TF++LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK+ ++D A   Y +M+ +++ P++  F  L+ GL   G + E   +  EM ++ + 
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T   L+ G  K      A+  + E   K   G+  P    Y A+I      G + +
Sbjct: 797 PNNLTYDILVTGHGKQSNKVEAMRLYCEMVGK---GFV-PKVSTYNALISDFTKAGMMTQ 852

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A +LF DM+   + P +CTY  ++ G  R +   +V   L DM + G  P       + R
Sbjct: 853 AKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICR 912

Query: 552 GYQENGDLKSAFR 564
            + + G    A R
Sbjct: 913 AFSKPGMTWQAQR 925



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 263/534 (49%), Gaps = 10/534 (1%)

Query: 35  CYSVFNALNSL-EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNAL 90
            Y++F  ++ +  +P  N   + TLI + ++ G  +E L +  ++    V+  +    AL
Sbjct: 293 AYALFREMDKVGAVP--NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++ L K+GK D V +     +   L  + VTY VLID  C   +V +A  +  EM +K I
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P VV ++ +I+G      + +A    R M+E G+ PN+ TY  L+DG+ K    + ALE
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            YH+ML   ++ N      L++GL + G++  A   F   +  G+  +   Y  LIDG  
Sbjct: 471 VYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           KAG++  A     E+    + PD   YN+ I  LC +G+ + A+ +L +M   G+  +  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQS 590

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TYN++I  +C++G+  KAL +  +M    ++PN++T+++L+ G    G ++ A  L  EM
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V     P  +    ++   S+   +   L +++ M+ A +   +   ++L+  L  +G  
Sbjct: 651 VSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMT 710

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A     E      G   +P+ + + A+I   C    +  A   ++ M   N+ P+  T
Sbjct: 711 RKATVVLEEML----GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + T+L GL    R+ +   +L +M K G+ P+ +   ++V G+ +  +   A R
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMR 820



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 241/516 (46%), Gaps = 7/516 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++  I+ +     +EEA  +Y  +    VL  +   +AL+ GL + G+F   +  +
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G V + VTY  LID     G   + L+L  EM+ +G+   +V YT L+  L  +
Sbjct: 298 REMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  E +   R      +  N  TY  L+D  CK  +V+ A +   EM   ++ PNVVTF
Sbjct: 358 GKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++G  K G L  A  +   M + G+ PN+  Y  LIDG  K      A+ +  +M  
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G++E A  L +     G+  + V Y +LIDG  K GDM  
Sbjct: 478 EGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     ++ ++ + P+ V ++  I+  C  G    A  + TEM    L PD   +  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIV 597

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              + G   + L+L  EM  + I P++ T ++L+ GLF  G +  A  + L   +    G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA-KYLLN--EMVSAG 654

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + +  ++QA     ++     +   M +  L  D   Y T+L+ L         
Sbjct: 655 F-SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 14/443 (3%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG------LVADVVTYGVLIDCCCGQGDVM 136
            +++ N++LN +I++G F    EFYE    CG      +  +V+++ ++I   C  G V 
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRALEFYE----CGVGGKTNISPNVLSFNLVIKAMCKLGLVD 189

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ +F EM  +  EP V  Y  L+ GLC E+++ EA  +   M+  G  P+  T+N L+
Sbjct: 190 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLI 249

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +G CK  D+ R  +    M      PN VT+  +++GLC  G+L  A +    M      
Sbjct: 250 NGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV 309

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   Y  LI+G  K G   + + L S +E+     + + Y+ LI GL    + E A GL
Sbjct: 310 PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGL 369

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            +KM ++G   N+V Y++LIDG C+EG +++A  +  +M  KG  PN  T+SSLI G  K
Sbjct: 370 WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 429

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN   A+ ++ EM   + VP+ + ++ LI GL +DG ++E + ++  ML   + P V  
Sbjct: 430 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 489

Query: 437 VSSLIHGLFKNGRISNALNFFLEK-TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
            SS+IHGL   G +   L  F E    ++D     P+ V Y  +++ALC    I  A  L
Sbjct: 490 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDS---QPDVVTYNILLRALCKQNSISHAIDL 546

Query: 496 FSDMRSDNLRPDNCTYTTMLRGL 518
            + M      PD  T    L  L
Sbjct: 547 LNSMLDRGCNPDLITCNIFLNAL 569



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 221/435 (50%), Gaps = 17/435 (3%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV------VPNL 189
           KA+ LF  M+D+     TV  +  +++ +  E     A   +    ECGV       PN+
Sbjct: 117 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY----ECGVGGKTNISPNV 172

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            ++N ++   CK+  V+RA+E + EM     +P+V T+  LMDGLCK   +  A      
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G FP+   +N LI+G CK G++     L   M      P+  TYN +I GLC  G+
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L+ A  LL +M     + N VTY +LI+G  K+G     + + S + E+G   N   +S+
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G  K    + AMGL+ +MV K   P++VV++ALIDGL ++G + E   +  EM+   
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            TP+ FT SSLI G FK G    A+  + E         C PN + Y+ +I  LC DG++
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN----CVPNEICYSVLIHGLCEDGKL 468

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI--KMGIVPDAVINQ 547
            +A  +++ M    LRPD   Y++M+ GL  A  +   + L  +M+  +    PD V   
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 528

Query: 548 VMVRGYQENGDLKSA 562
           +++R   +   +  A
Sbjct: 529 ILLRALCKQNSISHA 543



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 249/502 (49%), Gaps = 32/502 (6%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR-----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           F++++    + G    AL  Y      K  + P + + N ++  + K G  D   E + E
Sbjct: 138 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M +     DV TY  L+D  C +  + +A+ L DEM  +G  P+ V + +LI+GLC +  
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           MV    +  +M   G VPN  TYN +++G C    +++A+     M+     PN VT+G 
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GL K G      +    + + G   N + Y+ LI G  K     EAM L  +M +  
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++  Y+ LI GLC  G+L+ A+ +L +M  +G   N  TY+SLI G+ K G+ +KA+
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V  +M +    PN + +S LI G C+ G +  AM ++T M+ + L PDVV ++++I GL
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497

Query: 410 SKDGNMKETLRLYKEML--EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              G+++  L+L+ EML  E+   P V T + L+  L K   IS+A++      D+    
Sbjct: 498 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG--- 554

Query: 468 YCSPNHVLYAAIIQAL------CYDG---------------QILKASKLFSDMRSDNLRP 506
            C+P+ +     + AL        DG               +I+ A+K+   M    L P
Sbjct: 555 -CNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 613

Query: 507 DNCTYTTMLRGLLRAKRMLDVM 528
           +  T+  ++  L + K++  ++
Sbjct: 614 NASTWERIIPELCKPKKVQAII 635



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 217/458 (47%), Gaps = 31/458 (6%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
              + I K  P VF+  TL+    +   I+EA+ +  ++++    P+    N L+NGL K
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG    V +  + M L G V + VTY  +I+  C +G + KA++L D M+     P  V 
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI+GL  + + V+   +  S+ E G   N Y Y+ L+ G  K      A+  + +M+
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               QPN+V +  L+DGLC+ G+L  A      M   G  PN F Y+ LI G  K GN  
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +  EM K    P+   Y++LI GLC  G+L  A  +   M   G+  +VV Y+S+I
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 337 DGYCKEGDMEKALSVCSQM--TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
            G C  G +E  L + ++M   E   +P+VVT++ L+   CK  +I  A+ L   M+ + 
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA- 453
             PD++     ++ L +  N  +  R +              +  L+  L K  RI  A 
Sbjct: 555 CNPDLITCNIFLNALREKLNPPQDGREF--------------LDELVVRLHKRQRIVGAA 600

Query: 454 --LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             +   L+K       +  PN   +  II  LC   ++
Sbjct: 601 KIIEVMLQK-------FLPPNASTWERIIPELCKPKKV 631



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 189/368 (51%), Gaps = 7/368 (1%)

Query: 198 GYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--AKFG 254
            Y K     +A+E +  M+     +  V +F  +++ + + G    A  F+      K  
Sbjct: 108 AYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 167

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN+  +N +I   CK G +  A+ +  EM   +  PDVFTY  L+ GLC   +++ A 
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M  EG   + VT+N LI+G CK+GDM +   +   M  KG  PN VT++++I+G 
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G +D A+ L   MV    VP+ V +  LI+GL K G   + + L   + E     + 
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +  S+LI GLFK  +   A+  + +  +K     C PN V+Y+A+I  LC +G++ +A +
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKG----CQPNIVVYSALIDGLCREGKLDEAKE 403

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +  +M +    P+  TY+++++G  +       + +  +M K   VP+ +   V++ G  
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463

Query: 555 ENGDLKSA 562
           E+G L+ A
Sbjct: 464 EDGKLREA 471



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 179/377 (47%), Gaps = 7/377 (1%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T+ +L++ Y    D     + +  M           F ++     K      A   F  M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 251 A-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSL--CSEMEKFEISPDVFTYNILIKGLCGV 307
             +F     +  +N +++   + G    A+    C    K  ISP+V ++N++IK +C +
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G ++ A  + ++M  +    +V TY +L+DG CKE  +++A+ +  +M  +G  P+ VTF
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + LI+G CK G++     L   M +K  VP+ V +  +I+GL   G + + + L   M+ 
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           +K  P+  T  +LI+GL K GR  + ++      ++        N   Y+ +I  L  + 
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA----NEYAYSTLISGLFKEE 361

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           +  +A  L+  M     +P+   Y+ ++ GL R  ++ +   +L +M+  G  P+A    
Sbjct: 362 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYS 421

Query: 548 VMVRGYQENGDLKSAFR 564
            +++G+ + G+ + A R
Sbjct: 422 SLIKGFFKTGNSQKAIR 438


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 230/460 (50%), Gaps = 22/460 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ L++    +G ++EA   + +  +  V+P     N +++G  K+G+        
Sbjct: 266 NRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLR 325

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM    L  DVVTY  LI+ C   G   +   L +EM  +G++P  V Y +++     +
Sbjct: 326 EEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKK 385

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM E +   R M E G +P++ TYN L+  +CKV  ++ A     EM    L+ + VT 
Sbjct: 386 GKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL 445

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC+  +L  A +      + G F +   Y  LI G+ K     +A+ L  EM++
Sbjct: 446 NTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKE 505

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EI P + TYN +I GLC +G+   A   L ++ + G++ + +TYN++I GYC+EG +EK
Sbjct: 506 KEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEK 565

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M EK  +P+VVT ++L+ G CK G ++ A+ L+   + K    D V +  +I 
Sbjct: 566 AFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIIL 625

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF----------- 456
            L K+    E   L +EM E K+ P  +T ++++ GL   GR+ +A  F           
Sbjct: 626 SLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSE 685

Query: 457 --FLEKTDKTDGGYCS------PNHVLYAAIIQALCYDGQ 488
             FLE   + D           PN + Y+  I  LC  G+
Sbjct: 686 NQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 263/539 (48%), Gaps = 13/539 (2%)

Query: 59  IIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW---EFYEEMVL 112
           I A+   G   +A  ++ +++ L   P +  CN LLN L++     S+      + + + 
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  +  ++ +LI   C +    +A+ +  +M D G  P  + Y  ++ GLC + ++ E
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +   M+  G+ PN  T+N L+ G C++  +  A      M  +++ P+  T+ V++ 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK G +  A      M    + P++  YN LI+G  + G+  E   L  EME   + P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TYN+++K     G+++  +  ++KM + G L ++VTYN+LI  +CK G M++A  + 
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M  KG++ + VT ++++   C+   +D A  L      +    D V +  LI G  K 
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
               + LRL+ EM E +I PS+ T +S+I GL + G+ + A    ++K D+       P+
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA----IDKLDELLESGLVPD 546

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y  II   C +GQ+ KA +  + M   N +PD  T  T+L GL +   +   + L  
Sbjct: 547 EITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             I  G   DAV    ++    +      AF   E ++E ++G    + +T  + LG L
Sbjct: 607 TWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGP---DCYTYNAILGGL 662



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 238/496 (47%), Gaps = 13/496 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N + F+ LI          EA+ V  K+      P     N +L+GL KKG+ +   +
Sbjct: 194 KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARD 253

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +M   GL  +  T+ +L+  CC  G + +A N+ + M    + P    Y ++I G C
Sbjct: 254 LLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ EA  +   M    + P++ TYN L++G  +        +   EM    ++PN V
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ V++    K G++         M + G  P+I  YN LI  HCK G + EA  L  EM
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  +  D  T N +++ LC   +L+ A  LL    + G   + V+Y +LI GY K    
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL +  +M EK + P+++T++S+I G C+ G  + A+    E++   LVPD + +  +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---LEKTD 462
           I G  ++G +++  + + +M+E    P V T ++L+ GL K G +  AL  F   + K  
Sbjct: 554 IHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK 613

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
             D        V Y  II +LC + +  +A  L  +M    L PD  TY  +L GL  A 
Sbjct: 614 DVDA-------VSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAG 666

Query: 523 RMLDVMMLLADMIKMG 538
           RM D    ++ + + G
Sbjct: 667 RMKDAEEFISKIAEKG 682


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 228/443 (51%), Gaps = 14/443 (3%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG------LVADVVTYGVLIDCCCGQGDVM 136
            +++ N++LN +I++G F    EFYE    CG      +  +V+++ ++I   C  G V 
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRALEFYE----CGVGGKTNISPNVLSFNLVIKAMCKLGLVD 205

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ +F EM  +  EP V  Y  L+ GLC E+++ EA  +   M+  G  P+  T+N L+
Sbjct: 206 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLI 265

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +G CK  D+ R  +    M      PN VT+  +++GLC  G+L  A +    M      
Sbjct: 266 NGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV 325

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   Y  LI+G  K G   + + L S +E+     + + Y+ LI GL    + E A GL
Sbjct: 326 PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGL 385

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            +KM ++G   N+V Y++LIDG C+EG +++A  +  +M  KG  PN  T+SSLI G  K
Sbjct: 386 WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 445

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            GN   A+ ++ EM   + VP+ + ++ LI GL +DG ++E + ++  ML   + P V  
Sbjct: 446 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 505

Query: 437 VSSLIHGLFKNGRISNALNFFLEK-TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
            SS+IHGL   G +   L  F E    ++D     P+ V Y  +++ALC    I  A  L
Sbjct: 506 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDS---QPDVVTYNILLRALCKQNSISHAIDL 562

Query: 496 FSDMRSDNLRPDNCTYTTMLRGL 518
            + M      PD  T    L  L
Sbjct: 563 LNSMLDRGCNPDLITCNIFLNAL 585



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 221/435 (50%), Gaps = 17/435 (3%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV------VPNL 189
           KA+ LF  M+D+     TV  +  +++ +  E     A   +    ECGV       PN+
Sbjct: 133 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY----ECGVGGKTNISPNV 188

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            ++N ++   CK+  V+RA+E + EM     +P+V T+  LMDGLCK   +  A      
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G FP+   +N LI+G CK G++     L   M      P+  TYN +I GLC  G+
Sbjct: 249 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 308

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L+ A  LL +M     + N VTY +LI+G  K+G     + + S + E+G   N   +S+
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G  K    + AMGL+ +MV K   P++VV++ALIDGL ++G + E   +  EM+   
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
            TP+ FT SSLI G FK G    A+  + E         C PN + Y+ +I  LC DG++
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN----CVPNEICYSVLIHGLCEDGKL 484

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI--KMGIVPDAVINQ 547
            +A  +++ M    LRPD   Y++M+ GL  A  +   + L  +M+  +    PD V   
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544

Query: 548 VMVRGYQENGDLKSA 562
           +++R   +   +  A
Sbjct: 545 ILLRALCKQNSISHA 559



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 249/502 (49%), Gaps = 32/502 (6%)

Query: 55  FSTLIIAFSEMGHIEEALWVYR-----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           F++++    + G    AL  Y      K  + P + + N ++  + K G  D   E + E
Sbjct: 154 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M +     DV TY  L+D  C +  + +A+ L DEM  +G  P+ V + +LI+GLC +  
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           MV    +  +M   G VPN  TYN +++G C    +++A+     M+     PN VT+G 
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++GL K G      +    + + G   N + Y+ LI G  K     EAM L  +M +  
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P++  Y+ LI GLC  G+L+ A+ +L +M  +G   N  TY+SLI G+ K G+ +KA+
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V  +M +    PN + +S LI G C+ G +  AM ++T M+ + L PDVV ++++I GL
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 410 SKDGNMKETLRLYKEML--EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              G+++  L+L+ EML  E+   P V T + L+  L K   IS+A++      D+    
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG--- 570

Query: 468 YCSPNHVLYAAIIQAL------CYDG---------------QILKASKLFSDMRSDNLRP 506
            C+P+ +     + AL        DG               +I+ A+K+   M    L P
Sbjct: 571 -CNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 629

Query: 507 DNCTYTTMLRGLLRAKRMLDVM 528
           +  T+  ++  L + K++  ++
Sbjct: 630 NASTWERIIPELCKPKKVQAII 651



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 217/458 (47%), Gaps = 31/458 (6%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
              + I K  P VF+  TL+    +   I+EA+ +  ++++    P+    N L+NGL K
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG    V +  + M L G V + VTY  +I+  C +G + KA++L D M+     P  V 
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI+GL  + + V+   +  S+ E G   N Y Y+ L+ G  K      A+  + +M+
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               QPN+V +  L+DGLC+ G+L  A      M   G  PN F Y+ LI G  K GN  
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +  EM K    P+   Y++LI GLC  G+L  A  +   M   G+  +VV Y+S+I
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 337 DGYCKEGDMEKALSVCSQM--TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
            G C  G +E  L + ++M   E   +P+VVT++ L+   CK  +I  A+ L   M+ + 
Sbjct: 511 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA- 453
             PD++     ++ L +  N  +  R +              +  L+  L K  RI  A 
Sbjct: 571 CNPDLITCNIFLNALREKLNPPQDGREF--------------LDELVVRLHKRQRIVGAA 616

Query: 454 --LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             +   L+K       +  PN   +  II  LC   ++
Sbjct: 617 KIIEVMLQK-------FLPPNASTWERIIPELCKPKKV 647



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 189/368 (51%), Gaps = 7/368 (1%)

Query: 198 GYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFV--HMAKFG 254
            Y K     +A+E +  M+     +  V +F  +++ + + G    A  F+      K  
Sbjct: 124 AYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 183

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN+  +N +I   CK G +  A+ +  EM   +  PDVFTY  L+ GLC   +++ A 
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL +M  EG   + VT+N LI+G CK+GDM +   +   M  KG  PN VT++++I+G 
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G +D A+ L   MV    VP+ V +  LI+GL K G   + + L   + E     + 
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +  S+LI GLFK  +   A+  + +  +K     C PN V+Y+A+I  LC +G++ +A +
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKG----CQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +  +M +    P+  TY+++++G  +       + +  +M K   VP+ +   V++ G  
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 555 ENGDLKSA 562
           E+G L+ A
Sbjct: 480 EDGKLREA 487



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 179/377 (47%), Gaps = 7/377 (1%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T+ +L++ Y    D     + +  M           F ++     K      A   F  M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 251 A-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSL--CSEMEKFEISPDVFTYNILIKGLCGV 307
             +F     +  +N +++   + G    A+    C    K  ISP+V ++N++IK +C +
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G ++ A  + ++M  +    +V TY +L+DG CKE  +++A+ +  +M  +G  P+ VTF
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + LI+G CK G++     L   M +K  VP+ V +  +I+GL   G + + + L   M+ 
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           +K  P+  T  +LI+GL K GR  + ++      ++        N   Y+ +I  L  + 
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA----NEYAYSTLISGLFKEE 377

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           +  +A  L+  M     +P+   Y+ ++ GL R  ++ +   +L +M+  G  P+A    
Sbjct: 378 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYS 437

Query: 548 VMVRGYQENGDLKSAFR 564
            +++G+ + G+ + A R
Sbjct: 438 SLIKGFFKTGNSQKAIR 454


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 227/481 (47%), Gaps = 36/481 (7%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y+ M   G+  +V TY +L+   C    V  A  + DEM  KG  P  V Y  ++  LC 
Sbjct: 147 YDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK 206

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            +++ EA  +  +M      P   +YNA++   C+   +        +M+   LQPNV+T
Sbjct: 207 LDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 261

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++D  CK GELR A      M   G  PN+  +  L+ G    G + +A+ +   M 
Sbjct: 262 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 321

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +P   +YNILI+GLC VG L+GA  +L  M + G   NV TY++LIDG+ K GD+ 
Sbjct: 322 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 381

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A+S+ + M+  G +PNVV +++++D  CK    + A  L  +M++++  P+ V F  LI
Sbjct: 382 GAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLI 441

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT----- 461
             L     +   L ++ EM      P+  T + LIHGLF+ G   +AL+   E       
Sbjct: 442 RSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIE 501

Query: 462 ------DKTDGGYCS--------------------PNHVLYAAIIQALCYDGQILKASKL 495
                 +    G C                     PN   ++AII A C +G++  A+ +
Sbjct: 502 LSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM 561

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M   N   +   YT ++  L    +++D M  L  M+  GI P+ V   V+VRG   
Sbjct: 562 LGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 621

Query: 556 N 556
           N
Sbjct: 622 N 622



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 226/467 (48%), Gaps = 43/467 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC-NALLNGLIKKGKFDSVWEFYEEMVLC 113
           ++T++    ++  ++EA  V   +  +P + A  NA++  L ++ +   V+    +MV  
Sbjct: 197 YATIVSVLCKLDRLDEATEV---LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGR 253

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL  +V+TY  ++D  C  G++  A  +   M+  G  P VV +T L+ GL ++ ++ +A
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             M+R M   G  P+  +YN L+ G C V D+  A    + M  H   PNV T+  L+DG
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
             K G+L  A + +  M++ G  PN+ VY  ++D  CK     +A SL  +M      P+
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             T+N LI+ LC   ++  A G+  +M + G + N  TYN LI G  +EG+   AL + +
Sbjct: 434 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 493

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M   G+E ++VT+++++ G C+      AM    +M+++ + P+   F+A+I    K+G
Sbjct: 494 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 553

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
                +R+   ML A                       N +N             C  N 
Sbjct: 554 E----VRMAAWMLGAM----------------------NVVN-------------CHRNI 574

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           ++Y  ++  LC   +++ A      M  + + P+  T+  ++RG+ R
Sbjct: 575 LVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 621



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLN 92
           VF+ ++ +      P+V  ++T++ AF + G +  A  +  ++ +    P +    AL+ 
Sbjct: 243 VFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVR 302

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL   G+     + +  MV  G     V+Y +LI   C  GD+  A ++ + M   G  P
Sbjct: 303 GLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFP 362

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V  Y+ LI G      +  A S++  M   G  PN+  Y  ++D +CK    N+A    
Sbjct: 363 NVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLI 422

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +ML  N  PN VTF  L+  LC    +  A   F  M + G  PN   YN LI G  + 
Sbjct: 423 DKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 482

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN  +A+ + +EM+   I   + TYN ++ GLC       A   + KM  +GI  N  T+
Sbjct: 483 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 542

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++I  YCKEG++  A  +   M       N++ ++ L+   C    +  AM    +M+ 
Sbjct: 543 SAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLY 602

Query: 393 KSLVPDVVVFTALIDGLSKD 412
           + + P+ V +  L+ G+ ++
Sbjct: 603 EGIYPNTVTWNVLVRGVFRN 622


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/437 (33%), Positives = 224/437 (51%), Gaps = 14/437 (3%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           +S +  +  M   G   + V+Y  LI   C  G V + +N+F +M +    PTV  YT++
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVI 80

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +H L    + +EA ++F  MRE G  PN++TY  +++  CK   +        EM+   L
Sbjct: 81  VHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL 140

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            P+V T+  L+DG CK G + AA      M      PN   YN LI G C+  N+  AM+
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L S+M +  ++P V TYN LI G C +G L+ A  LL  M + G++ +  TY+  ID  C
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K+G +E+A  + + + EKG++ N V +++LIDG CKAG +D A  L   M+ +  +P+  
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            + ALIDGL K+  ++E L L + M++  +  +V T + LI  + K G    A       
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL--- 377

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR---- 516
                 GY  P+  +Y A I A C  G I +A  + S M    + PD  TYT ++     
Sbjct: 378 DQMVSSGY-QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436

Query: 517 -GLLRA-----KRMLDV 527
            GLL       KRM D 
Sbjct: 437 LGLLNPAFDVLKRMFDT 453



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 262/547 (47%), Gaps = 38/547 (6%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           +SVFN +      + N   ++ LI    E+G ++E + +++K+   +  P ++    +++
Sbjct: 24  FSVFNMMPKKGCRR-NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L + G+       + EM   G   ++ TY V+I+  C +  + +   + DEM++KG+ P
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVP 142

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           +V  Y  LI G C E  +  A+ +   M      PN  TYN L+ G+C+  +V+RA+   
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +ML   L P+VVT+  L+ G CK+G L +A      M + GV P+ + Y+  ID  CK 
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + EA  L + +++  I  +   Y  LI G C  G+++ A  LL +M  E  L N  TY
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+LIDG CKE  +++AL +   M +KG++  V T++ LI    K G+ D A  +  +MV 
Sbjct: 323 NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               PDV ++TA I      GN+KE   +   M E  + P   T + +I      G ++ 
Sbjct: 383 SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNP 442

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQ--------------ALCYD------------ 486
           A +      D      C P+H  Y+ +I+              ALC              
Sbjct: 443 AFDVLKRMFDTG----CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADV 498

Query: 487 GQILK---ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP-D 542
            +++K   A +LF  M      P+  TY  ++ GL +  R+     L   M + G+ P +
Sbjct: 499 WKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSE 558

Query: 543 AVINQVM 549
           A+ N ++
Sbjct: 559 AIYNSLL 565



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 197/465 (42%), Gaps = 67/465 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  F    ++  A+ +  K+    + P++   N+L++G  K G  DS +   
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+V D  TY V ID  C +G + +A  LF+ + +KGI+   VIYT LI G C  
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM +A S+   M     +PN  TYNAL+DG CK   V  AL     M+   L+  V T+
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L+  + K G+   A      M   G  P++++Y   I   C  GN+ EA  + S M +
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417

Query: 288 FEISPDVF-----------------------------------TYNILIK---------- 302
             + PD                                     TY+ LIK          
Sbjct: 418 RGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK 477

Query: 303 ----GLCG---------------VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
                LC                + + E A  L +KM + G   N+ TY  LI G CK G
Sbjct: 478 YKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVG 537

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +  A  +   M E+GV P+   ++SL++  C+ G    A+ L   M+    +P +    
Sbjct: 538 RLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLN 597

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            L  GL ++G+ ++   ++  +L+            LI GL KNG
Sbjct: 598 VLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG 642



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 184/385 (47%), Gaps = 22/385 (5%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           +FN+L    I K N  +++ LI  + + G +++A  +  ++   + LP     NAL++GL
Sbjct: 271 LFNSLKEKGI-KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K+ K        E M+  GL   V TY +LI     +GD   A  + D+M+  G +P V
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
            IYT  IH  C    + EAE M   M E GV+P+  TY  ++D Y  +  +N A +    
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M      P+  T+  L+  L K  EL      + ++A     PN+F  +          +
Sbjct: 450 MFDTGCDPSHHTYSCLIKHLLK-EELTKK---YKNVALCDSIPNVFFAD--------VAD 497

Query: 275 LFEAMSLCSEMEKFE------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +++ M   + +E FE       SP++ TY  LI GLC VG+L  A+ L   M + G+  +
Sbjct: 498 VWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPS 557

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
              YNSL++  C+ G    A+ +   M E G  P + + + L  G  + G+ + A  +++
Sbjct: 558 EAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFS 617

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDG 413
            ++      D V +  LIDGL K+G
Sbjct: 618 NLLQCGYNDDEVAWKILIDGLLKNG 642


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/374 (35%), Positives = 208/374 (55%), Gaps = 8/374 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           L  +E+    P++  ++TL+  FS  G IE A  +  +++     P +Q  N +L+ +  
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G+     E   EM   GLV D V+Y +LI  C   GD+  A    DEM+ +G+ PT   
Sbjct: 308 EGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT 364

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LIHGL  ENK+  AE + R +RE G+V +  TYN L++GYC+  D  +A   + EM+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +QP   T+  L+  LC+  + R A   F  +   G+ P++ + N L+DGHC  GN+ 
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A SL  EM+   I+PD  TYN L++GLCG G+ E A  L+ +M + GI  + ++YN+LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            GY K+GD + A  V  +M   G  P ++T+++L+ G  K    + A  L  EM  + +V
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604

Query: 397 PDVVVFTALIDGLS 410
           P+   F ++I+ +S
Sbjct: 605 PNDSSFCSVIEAMS 618



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 219/427 (51%), Gaps = 10/427 (2%)

Query: 140 NLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           NLFDE++   D+    + +++ +L+   C    + EA   F  M+E G  P   T N ++
Sbjct: 138 NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHIL 197

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
               ++  +  A  FY +M    ++ NV TF ++++ LCK G+L+ A  F   M  FG+ 
Sbjct: 198 TLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK 257

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN L+ G    G +  A  + SEM+     PD+ TYN ++  +C  G+   A  +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEV 314

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L++M + G++ + V+YN LI G    GD+E A +   +M ++G+ P   T+++LI G   
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              I+AA  L  E+  K +V D V +  LI+G  + G+ K+   L+ EM+   I P+ FT
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +SLI+ L +  +   A   F    +K  G    P+ V+   ++   C  G + +A  L 
Sbjct: 435 YTSLIYVLCRKNKTREADELF----EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M   ++ PD+ TY  ++RGL    +  +   L+ +M + GI PD +    ++ GY + 
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550

Query: 557 GDLKSAF 563
           GD K AF
Sbjct: 551 GDTKHAF 557



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 237/475 (49%), Gaps = 12/475 (2%)

Query: 54  VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F  L+    ++  ++EA+   ++ ++    P  + CN +L  L +  + ++ W FY +M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               + ++V T+ ++I+  C +G + KA      M   GI+PT+V Y  L+ G     ++
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   M+  G  P++ TYN ++   C   +  RA E   EM    L P+ V++ +L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNIL 333

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G    G+L  A  +   M K G+ P  + YN LI G      +  A  L  E+ +  I
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D  TYNILI G C  G  + A  L  +M  +GI     TY SLI   C++    +A  
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  ++  KG++P++V  ++L+DG C  GN+D A  L  EM + S+ PD V +  L+ GL 
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
            +G  +E   L  EM    I P   + ++LI G  K G   +A   F+ + +    G+ +
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA---FMVRDEMLSLGF-N 569

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL--LRAKR 523
           P  + Y A+++ L  + +   A +L  +M+S+ + P++ ++ +++  +  L AK+
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKK 624



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 242/551 (43%), Gaps = 69/551 (12%)

Query: 49  KFNPSVFSTLII--------AFSEMGHIEEALWVYR-----------KIEVLPAIQACNA 89
           K  PS+ ST ++        AF+ + HI+    +YR            I  L + +    
Sbjct: 68  KLTPSLVSTTLLSLVKTPNLAFNFVNHID----LYRLDFQTQCLAIAVISKLSSPKPVTQ 123

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           LL  ++   K +S+   ++E+VL          + + +L+ CCC    V +A+  F  M 
Sbjct: 124 LLKEVVTSRK-NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMK 182

Query: 147 DKGIEP-----------------------------------TVVIYTILIHGLCNENKMV 171
           +KG  P                                    V  + I+I+ LC E K+ 
Sbjct: 183 EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLK 242

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A+     M   G+ P + TYN L+ G+     +  A     EM     QP++ T+  ++
Sbjct: 243 KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             +C  G    A      M + G+ P+   YN LI G    G+L  A +   EM K  + 
Sbjct: 303 SWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P  +TYN LI GL    ++E AE L++++ ++GI+ + VTYN LI+GYC+ GD +KA ++
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M   G++P   T++SLI   C+      A  L+ ++V K + PD+V+   L+DG   
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            GNM     L KEM    I P   T + L+ GL   G+   A     E   +       P
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG----IKP 535

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +H+ Y  +I      G    A  +  +M S    P   TY  +L+GL + +       LL
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595

Query: 532 ADMIKMGIVPD 542
            +M   GIVP+
Sbjct: 596 REMKSEGIVPN 606


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 232/448 (51%), Gaps = 14/448 (3%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           + V P     N L++ L ++G+        ++M+  G   DVVTY +L++  C      +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ L D M  +G  P  V Y +L+ G+C E  + +A  + R++   G  P+   YN ++ 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C       A E   EML  N  PN  TF V++  LC+ G L+ A      M+K G   
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           NI  YN +I+G C+  N+  AM L S+M+ +   PD+ TYN L+KGLC   +   AE L+
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M + G L + VT+N+LI   C++G M  A+ V  QM +KG  PN +T+S++I G  KA
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A+ L+ EM  K   PD  ++  L + L+ D  ++E ++  +++ ++ I+P     
Sbjct: 301 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++++ GL +NG+   A++             C P+ + Y  +I+ L Y+G + +A +L  
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSG----CMPDDLTYVILIEGLAYEGYLNEARELLI 415

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            +         C+   ++  L++++ +L
Sbjct: 416 KL---------CSRDVLVNSLIKSEALL 434



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 5/355 (1%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           +QPN  T+  L+  LC+ G++R A +    M   G  P++  YN L++  CK     +AM
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L   M     +P+  TYN+L+ G+CG G ++ A  LL+ +   G   + V YN+++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C       A  + ++M  +   PN  TF+ +I   C+ G +  A+ L  +M       ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V + A+I+GL +  N+   + L  +M      P + T ++L+ GL    R  +A     E
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE----E 238

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             D      C P++V +  +I  LC  G ++ A ++F  M      P++ TY+T++ GL 
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +A ++   + L  +M   G  PD  I Q++     ++  ++ A +    L++S I
Sbjct: 299 KATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGI 352


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 262/517 (50%), Gaps = 11/517 (2%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIK 96
           L+ +      P VFS  TLI    ++G +  AL V+ ++ V   +  +   N L++G  K
Sbjct: 174 LDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFK 233

Query: 97  KGKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            G +D   E +E +V  C +  +VVTY ++I+  C  G   ++L +++ M     E  + 
Sbjct: 234 HGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMF 293

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y+ LIHGLC    +  A  +++ + E  +V +  T+NA+++G+C+   +  + E +  M
Sbjct: 294 TYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM 353

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
              N Q  VV++ +L+ GL + G++  A + +  + K G  P    Y  LI G CK G L
Sbjct: 354 GKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRL 412

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A+ +  E E      D + Y+ ++ GLC  G+++ A  ++ +M K G   +    N L
Sbjct: 413 NKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPL 472

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G+ +   +E A++   +M  KG  P +V++++LI G CKA     A     EM+ K  
Sbjct: 473 INGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEW 532

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PD++  + L+DGL ++  ++  L L+++ L+    P +   + L+HGL    ++ +AL 
Sbjct: 533 KPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQ 592

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            +      T    C PN V    +++ L       KAS+++  +  D L PD  +Y   +
Sbjct: 593 LYSHMKRST----CVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITI 648

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +GL    R+ D +  L D +  GI+P AV   ++VR 
Sbjct: 649 KGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 264/507 (52%), Gaps = 11/507 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   ++ LI    +   IE+A+    W++ +  + P + +   L+NG++K G      + 
Sbjct: 150 NLQTYNILIKISCKKQQIEKAISLLDWMWSQ-NLKPDVFSYGTLINGMVKVGDLLGALKV 208

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLC 165
           ++EM + G+VADV  Y +LID     GD  K   +++ ++ D  + P VV Y I+I+GLC
Sbjct: 209 FDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLC 268

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  E+  ++  M +     +++TY++L+ G C+  +++ A+  Y E++  +L  + V
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T   +++G C+ G+++ +   ++ M K      +  YN LI G  + G + EA+S+   +
Sbjct: 329 THNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELL 387

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K    P+  TY +LI GLC  G+L  A  + ++        +   Y+S++DG CKEG M
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRM 447

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A+S+ +QM ++G + +    + LI+G  +A  ++ A+  + EM  K   P +V +  L
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL K     E     KEMLE +  P + T S L+ GL +  +I  ALN + +  DK  
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK-- 565

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G+  P+  +Y  ++  LC   ++  A +L+S M+     P+  T  T++ GL + +   
Sbjct: 566 -GF-KPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYE 623

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRG 552
               +   ++K G+ PD +   + ++G
Sbjct: 624 KASEIWDCILKDGLHPDIISYNITIKG 650



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 265/523 (50%), Gaps = 14/523 (2%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           T+I A+++     +AL  ++ ++ +    P +++ N LLN  ++  ++D    F      
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +  ++ TY +LI   C +  + KA++L D M  + ++P V  Y  LI+G+     ++ 
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLM 231
           A  +F  M   GVV ++  YN L+DG+ K  D ++  E +  ++   ++ PNVVT+ +++
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCK G    +   +  M K     ++F Y+ LI G C+AGN+  A+ +  E+ +  + 
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D  T+N ++ G C  G+++ +  L   M KE     VV+YN LI G  + G +E+A+S+
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISI 383

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              + +KG  P   T+  LI G CK G ++ A+ ++ E        D   +++++DGL K
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443

Query: 412 DGNMKETLRLYKEMLEA--KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           +G M E + +  +M +   K+ P V   + LI+G  +  ++ +A+NFF E   K     C
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKLEDAINFFREMECKG----C 497

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           SP  V Y  +I+ LC   +  +A     +M     +PD  T + ++ GL + K++   + 
Sbjct: 498 SPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALN 557

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           L    +  G  PD  +  +++ G      L+ A +    +K S
Sbjct: 558 LWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 252/512 (49%), Gaps = 9/512 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL+ AF E+   + A    R  E   V P +Q  N L+    KK + +      + M 
Sbjct: 119 YNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMW 178

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              L  DV +YG LI+     GD++ AL +FDEM  +G+   V  Y +LI G        
Sbjct: 179 SQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYD 238

Query: 172 EAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           + + ++ R +++C V PN+ TYN +++G CK    + +LE +  M  +  + ++ T+  L
Sbjct: 239 KGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSL 298

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC+ G +  A   +  + +  +  +   +N +++G C+AG + E+  L   M K E 
Sbjct: 299 IHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGK-EN 357

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              V +YNILIKGL   G++E A  + + + K+G      TY  LI G CK G + KAL 
Sbjct: 358 CQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALK 417

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +  +   + +   +SS++DG CK G +D A+ +  +M  +    D  V   LI+G  
Sbjct: 418 IFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFV 477

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +   +++ +  ++EM     +P++ + ++LI GL K  R S A +F  E  +K       
Sbjct: 478 RASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE----WK 533

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ +  + ++  LC + +I  A  L+        +PD   Y  ++ GL    ++ D + L
Sbjct: 534 PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQL 593

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + M +   VP+ V    ++ G  +  D + A
Sbjct: 594 YSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKA 625



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 5/122 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           F P +  ++ L+     +  +E+AL +Y   ++   +P +   N L+ GL K   ++   
Sbjct: 567 FKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKAS 626

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E ++ ++  GL  D+++Y + I   C    +  A+   ++ +++GI PT V + IL+   
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAA 686

Query: 165 CN 166
            N
Sbjct: 687 VN 688


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 254/524 (48%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  ++ A    G I +AL V  ++      P     + +L    + G F S     
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E++   G   DV    ++++  C QG V KAL+L  ++   G EP VV Y  ++ GLC  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +    + +   M      PN+ T+N L+   C+     R  E   +M  H   P++  +
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMY 300

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L+ A      M  +G+ PN+  YN L+ G C A    E   L +EM  
Sbjct: 301 ATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M   G + +V+TY ++I+G+CKEG +++
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDE 420

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   MT  G +PN ++++ ++ G C A     A  L ++M+ +    + + F  LI+
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG--- 537

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G+I K  ++F +++   +R D   Y  ++  L +       
Sbjct: 538 -MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +  LA M+  G VP+     +++RG    G +K A    E L E
Sbjct: 597 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA---QEMLTE 637



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 220/444 (49%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  + G +++AL + R +      P + + NA+L GL    ++  V E  EEMV      
Sbjct: 201 AICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M + G  P + +Y  +I G+C E  +  A  + 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN L+ G C         E   EM   +   + VTF +L+D  C+ 
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M   G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC   +   AE L+ +M ++G   N +T+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  D A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K G    A+ F            C PN   Y 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG----CVPNESTYT 616

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G + +A ++ +++ S
Sbjct: 617 ILIRGLASEGFVKEAQEMLTELCS 640



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 226/489 (46%), Gaps = 7/489 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA++ G  + G+ +S       +    +  +  TY  ++   C +G +  AL + DEM  
Sbjct: 94  NAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  P   +Y +++   C       A  +   +   G   ++   N +++  C    V++
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK 210

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    ++     +P+VV++  ++ GLC              M +    PNI  +N LI 
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C+ G       + ++M +   +PD+  Y  +I G+C  G L+ A  +L +M   G+  
Sbjct: 271 YLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKP 330

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVV YN+L+ G C     E+   + ++M +K    + VTF+ L+D  C+ G +D  + L 
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M++   +PDV+ +T +I+G  K+G + E + L K M      P+  + + ++ GL   
Sbjct: 391 EQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            R  +A +   +   +     C  N + +  +I  LC  G + +A +L   M  +   PD
Sbjct: 451 ERWVDAEDLMSQMIQQG----CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             +Y+T++ GL +A +  + + LL  M+  G+ P+ +I   +       G +    +  +
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 568 FLKESRIGS 576
            ++++ I S
Sbjct: 567 NIQDTTIRS 575



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 193/398 (48%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++E +    ++   P I   N L++ L + G F+ V E   +M   G   D+  Y  +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C +G +  A  + + M   G++P VV Y  L+ GLC+  +  E E +   M +   
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             +  T+N L+D +C+   V+R +E   +ML H   P+V+T+  +++G CK G +  A  
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M   G  PN   Y  ++ G C A    +A  L S+M +     +  T+N LI  LC
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  LL++M   G   ++++Y+++IDG  K G  ++AL + + M  KG+ PN +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +SS+     + G I+  + ++  +   ++  D V++ A+I  L K G  +  +     M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + +   P+  T + LI GL   G +  A     E   K
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 139/272 (51%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M++ G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  + YTI++ GLC+  + V+AE +   M + G   N  T+N L++  CK   V +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC  G+ E A   L  M   G + 
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG +++A  + +++  KG
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 247/468 (52%), Gaps = 9/468 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVWEF 106
           P+V  +ST I    ++G++E AL + R +          + N ++ G  K+G+     + 
Sbjct: 354 PTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQV 413

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            EEM   G++ DV +Y +LI+  CG+GDVMK L+L +EM    I+P++V YT LIHGLC 
Sbjct: 414 LEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCK 473

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           +N +  A  +F S+       +   Y  L+DG+C   D++ A++   EM+ + L P   +
Sbjct: 474 KNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFS 533

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+ G  K+G    A   F  M + G++P+    N ++DG C+AG   EA++L  + +
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +   + +  +YN +I  LC  G  E A  LL +M K  +L +VV Y++LI G+ K+ + +
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A+++ ++M + G+  N+ T++ L+     +  +  A G++ EM  + L  D + +T LI
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLI 713

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G   +  MK+   L++EM     +P+V T + +I G  K+ RI  A   F    DK + 
Sbjct: 714 VGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVF----DKMNR 769

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
               P+ V Y  +I      G   +A KL+  M+   + PD+ T+  +
Sbjct: 770 DSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 152/613 (24%), Positives = 291/613 (47%), Gaps = 48/613 (7%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           I +  A A +      L++D+     +++      +S F  L+S +  + +  VF  LI 
Sbjct: 198 IVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAF--LDSPQHVERSGVVFDVLIS 255

Query: 61  AFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
            F+    +E AL V+   + + + P I+ CN LL  L++  + + V   +EE+   G   
Sbjct: 256 VFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSP 315

Query: 118 DVVTYGVLIDCCCGQ----GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN------- 166
           ++ TY ++++  C        + +A  +  ++   G +PTVV Y+  IHGLC        
Sbjct: 316 NIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAA 375

Query: 167 ----------------------------ENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
                                         ++ EA  +   M+  G++P++Y+Y+ L++ 
Sbjct: 376 LMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINA 435

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C   DV + L+   EM H  ++P++V++  L+ GLCK   L+ A + F  +       +
Sbjct: 436 FCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYD 495

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
             VY  LIDG C  G++  A+ L  EM   E+ P  F+   LI+G   +G  + A  +  
Sbjct: 496 STVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFN 555

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M ++GI  + +  N ++DG C+ G  ++AL++     E G   N  +++++I   CK G
Sbjct: 556 AMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEG 615

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A+ L   M+ ++++P VV ++ LI G +K  N K  + L+  M++  IT ++ T +
Sbjct: 616 YPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYT 675

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+     + ++  A   F E  ++   G C  + + Y  +I   C + ++ KA  LF +
Sbjct: 676 ILMSIFSHSHKMHEAYGIFKEMKER---GLCL-DQISYTTLIVGFCNNREMKKAWALFEE 731

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M  +   P+  TYT ++ G  ++ R+     +   M +  ++PD V   V++  Y ++G 
Sbjct: 732 MSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGY 791

Query: 559 LKSAFRCSEFLKE 571
              A +  + +K+
Sbjct: 792 FDQAHKLYDVMKD 804


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 246/511 (48%), Gaps = 42/511 (8%)

Query: 80   VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            V P ++ CN +L  L    ++D +   +EEM+  G+   +VTY  L+D    +G   K  
Sbjct: 1080 VAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVA 1139

Query: 140  NLFDEMIDKGIE--PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
             L  EM  +G    P  V Y ++I GL  +  + EA  +   MR      + +TYN L+ 
Sbjct: 1140 MLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS-FTYNPLIT 1198

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            G      V +  +   EM +  + P VVT+  ++ GL + G + AA   F  M   G+ P
Sbjct: 1199 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLP 1258

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            ++  YN L++G+CKAGNL EA+ L  ++ +  ++P V TYNILI G C +G LE A  L 
Sbjct: 1259 DVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILK 1318

Query: 318  QKMYKEGILANVVTYNSLIDG--------------------------------YCKE--- 342
            ++M ++G L NV TY  L+ G                                 C E   
Sbjct: 1319 EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
            GD+ +A  +   +  +G+  + VT++ LI G CK GN+  A  L  +MV   L PD + +
Sbjct: 1379 GDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 1438

Query: 403  TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            T LI    + G ++E  +++  M+   + PS  T + +IH   + G + +A  +F +  +
Sbjct: 1439 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 1498

Query: 463  KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
            +       PN + Y  +I ALC  G+   AS  F +M    L  +  TYT ++ G  +  
Sbjct: 1499 EG----VEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 1554

Query: 523  RMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
               D M    +M + GI PD + ++ +++G+
Sbjct: 1555 NWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 195/378 (51%), Gaps = 2/378 (0%)

Query: 80   VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
            ++P +   NA+++GL++ G  ++    + EM   GL+ DV+TY  L++  C  G++ +AL
Sbjct: 1221 IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEAL 1280

Query: 140  NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
             LF ++   G+ PTV+ Y ILI G C    + EA  +   M E G +PN+ TY  LM G 
Sbjct: 1281 LLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 1340

Query: 200  CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
              V  +  A EF+ EML   LQP+   +   +     +G++  A      +   G+  + 
Sbjct: 1341 LNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDT 1400

Query: 260  FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
              YN LI G CK GNL +A  L  +M    + PD  TY  LI   C  G L  A  +   
Sbjct: 1401 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 1460

Query: 320  MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
            M  +G+L + VT+  +I  YC+ G++  A     +M E+GVEPN +T++ LI   C+ G 
Sbjct: 1461 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 1520

Query: 380  IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
               A   + EM+ + LV +   +T LIDG  K GN ++ +R Y EM +  I P   T  +
Sbjct: 1521 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 1580

Query: 440  LIHGLFKNGRISNALNFF 457
            L+ G   +G + + + + 
Sbjct: 1581 LLKGF--DGHVHHTIEYL 1596



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 216/441 (48%), Gaps = 8/441 (1%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC--NALLNGLIKKGKFDSVWEFYE 108
            N   ++ +I   +  G +EEA  +   + +     +   N L+ GL+ +G    V++   
Sbjct: 1155 NDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQL 1214

Query: 109  EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            EM   G++  VVTY  +I      G V  A   F EM   G+ P V+ Y  L++G C   
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 1274

Query: 169  KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
             + EA  +F  +R  G+ P + TYN L+DGYC++ D+  A     EM      PNV T+ 
Sbjct: 1275 NLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 1334

Query: 229  VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +LM G   V  L  A  FF  M   G+ P+ F YN  I      G++  A  L   +   
Sbjct: 1335 ILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLE 1394

Query: 289  EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
             IS D  TYNILI GLC  G L+ A+ L  KM   G+  + +TY  LI  +C+ G + +A
Sbjct: 1395 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREA 1454

Query: 349  LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
              + + M   G+ P+ VTF+ +I   C+ GN+ +A G + +M+ + + P+ + +  LI  
Sbjct: 1455 RKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 1514

Query: 409  LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
            L + G  +     + EMLE  +  + +T + LI G  K G   +A+ F+ E         
Sbjct: 1515 LCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG---- 1570

Query: 469  CSPNHVLYAAIIQALCYDGQI 489
              P+++ + A+++   +DG +
Sbjct: 1571 IHPDYLTHKALLKG--FDGHV 1589



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 214/432 (49%), Gaps = 17/432 (3%)

Query: 139  LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            L+ F EM   G+ P V     ++  L +  +  +  ++   M E G+ P++ TYN L+D 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 199  YCKVADVNRALEFYHEMLHHNLQ--PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            + K    ++      EM        PN VT+ V++ GL + G+L  A      M +    
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 1187

Query: 257  PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
             + F YN LI G    G + +   L  EME   I P V TYN +I GL   G +E A+  
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 317  LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              +M   G+L +V+TYNSL++GYCK G++++AL +   +   G+ P V+T++ LIDG C+
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 377  AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
             G+++ A  L  EM  +  +P+V  +T L+ G     ++      + EML   + P  F 
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 437  VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             ++ I      G I+ A  F L +    +G   S + V Y  +I  LC  G +  A +L 
Sbjct: 1368 YNTRICAELILGDIARA--FELREVLMLEG--ISSDTVTYNILIHGLCKTGNLKDAKELQ 1423

Query: 497  SDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
              M S+ L+PD  TYT ++     RGLLR  R      +  +MI  G++P AV   V++ 
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREAR-----KIFNNMISDGLLPSAVTFTVIIH 1478

Query: 552  GYQENGDLKSAF 563
             Y   G+L SA+
Sbjct: 1479 AYCRRGNLYSAY 1490



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 7/325 (2%)

Query: 247  FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
            F  MA  GV P++   N ++     A    +  ++  EM +  I P + TYN L+     
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 307  VGQLEGAEGLLQKMYKEG--ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
             G+ +    LL++M   G   L N VTYN +I G  ++GD+E+A  +   M     + + 
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASS 1190

Query: 365  VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             T++ LI G    G +     L  EM  + ++P VV + A+I GL + G ++     + E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 425  MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
            M    + P V T +SL++G  K G +  AL  F    D    G  +P  + Y  +I   C
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF---GDLRRAG-LAPTVLTYNILIDGYC 1306

Query: 485  YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
              G + +A  L  +M      P+ CTYT +++G L  + +        +M+  G+ PD  
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366

Query: 545  INQVMVRGYQENGDLKSAFRCSEFL 569
                 +      GD+  AF   E L
Sbjct: 1367 AYNTRICAELILGDIARAFELREVL 1391


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 242/481 (50%), Gaps = 12/481 (2%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSV 103
           F P V  ++ LI  +      EEA  V R++E    V P+++  N +L+GL K GK  + 
Sbjct: 90  FLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAA 149

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            + +E     G   D+ TY  ++D       +  A+ L +++   G  PT+  Y  L++G
Sbjct: 150 MDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNG 209

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   ++ EA  + R + + G  P++ TY +L+DG  K      A + + EM    L  +
Sbjct: 210 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLD 269

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V +  L+ GL + G++  A + +  M   G  P++   + +IDG CKAG +  A+ +  
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            ME   ++P+   Y+ LI GLC   +++ A  +L +M K     + +TYN LIDG CK G
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           D+E A +   +M E G +P+V T++ L+ G CKAGN DAA G++ +M      P+VV + 
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI GL K   + +    ++ M E    P  F  SSL+ GL K+G++      F E    
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS 509

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                   N      +I  LC   ++ +A  LF+ +R + + P    Y +++  L+++ +
Sbjct: 510 G-----VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAK 563

Query: 524 M 524
           +
Sbjct: 564 V 564



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 234/483 (48%), Gaps = 7/483 (1%)

Query: 101 DSVWEFYE--EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           D  WE ++       G    V T   L+D         +A NL    +     P V  + 
Sbjct: 39  DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWN 98

Query: 159 ILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           +LI G C   +  EA ++ R M E  GV P+L T+N ++ G CK   V  A++ +     
Sbjct: 99  VLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT 158

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
           +    ++ T+  ++D L K  +++ A      +   G  P I  YN L++G CK G L E
Sbjct: 159 NGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ L  ++     +PDV TY  LI GL    +   A  L ++M   G++ + V Y +LI 
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIR 278

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G  + G + +A SV   MT +G  P+VVT S++IDG CKAG I AA+ ++  M  + L P
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + VV++ALI GL K   M   L +  +M +A  TP   T + LI GL K+G +  A  FF
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  +      C P+   Y  ++   C  G    A  +F DM S +  P+  TY T++ G
Sbjct: 399 DEMLE----AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           L + +++    +    M + G  PD+ +   +V G  ++G L+      + ++ S + +S
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS 514

Query: 578 ETE 580
           +T 
Sbjct: 515 QTR 517



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 152/305 (49%), Gaps = 10/305 (3%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           ++ CL D    A  LF+ +S      +F     V T N L+       +   A  LL+  
Sbjct: 31  IFQCLKDADL-AWELFQCLS----SPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 85

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGN 379
                L +V T+N LI GYC   + E+A +V  +M E  GV P++ T + ++ G CK+G 
Sbjct: 86  LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           + AAM  +          D+  +TA++D L+K+  +++ + L +++     TP++ T ++
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L++GL K GR+  A++   +  D      C+P+ V Y ++I  L  + +  +A KLF +M
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNG----CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
               L  D   YT ++RGLL+A ++     +   M   G VPD V    M+ G  + G +
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 560 KSAFR 564
            +A R
Sbjct: 322 GAAVR 326


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 121/328 (36%), Positives = 189/328 (57%)

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           +  EM   GLV D V Y ++I   C  G +  AL + DEM+  G  P VV Y  L++GLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E ++++AE +   MRE GV P+L T+  L+ GYC    +++AL+ +  ML+  L+P++V
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+DG+C+ G+L  A + +  M    +FPN   Y+ LID HC+ G + +A     EM
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I P++ TYN +IKG C  G +   +  LQKM    +  +++TYN+LI GY KE  M
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + + M ++ V+P+VVT++ LI+G    GN+  A  ++ +M  K + PD   + ++
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPS 433
           I+G    GN KE  +L+ EML+    P 
Sbjct: 303 INGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 177/309 (57%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ G  + G         +EMV CG + DVVTY  L++  C +  ++ A  L +EM ++G
Sbjct: 22  VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 81

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P +  +T LIHG C E K+ +A  +F +M    + P++ TYN L+DG C+  D+++A 
Sbjct: 82  VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 141

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + + +M    + PN VT+ +L+D  C+ G++  A  F   M   G+ PNI  YN +I G+
Sbjct: 142 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 201

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C++GN+ +      +M   ++SPD+ TYN LI G     ++  A  LL  M KE +  +V
Sbjct: 202 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 261

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYN LI+G+   G++++A  +  +M  KG+EP+  T+ S+I+G   AGN   A  L+ E
Sbjct: 262 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 321

Query: 390 MVIKSLVPD 398
           M+ +   PD
Sbjct: 322 MLQRGFAPD 330



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 167/311 (53%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P  VIYT++I G C    M +A  +   M  CG +P++ TYN L++G CK   +  A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
               +EM    + P++ TF  L+ G C  G+L  A   F  M    + P+I  YN LIDG
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C+ G+L +A  L  +M   EI P+  TY+ILI   C  GQ+E A G L +M  +GIL N
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           ++TYNS+I GYC+ G++ K      +M    V P+++T+++LI G  K   +  A  L  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            M  + + PDVV +  LI+G S  GN++E   ++++M    I P  +T  S+I+G    G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 449 RISNALNFFLE 459
               A     E
Sbjct: 311 NSKEAFQLHDE 321



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 177/336 (52%), Gaps = 8/336 (2%)

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           + +  EM    L P+ V + +++ G C+ G +  A      M   G  P++  YN L++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK   L +A  L +EM +  + PD+ T+  LI G C  G+L+ A  L   M  + +  +
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           +VTYN+LIDG C++GD++KA  +   M  + + PN VT+S LID  C+ G ++ A G   
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM+ K ++P+++ + ++I G  + GN+ +  +  ++M+  K++P + T ++LIHG  K  
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 449 RISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           ++ +A      +EK          P+ V Y  +I      G + +A  +F  M +  + P
Sbjct: 241 KMHDAFKLLNMMEKEK------VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 294

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           D  TY +M+ G + A    +   L  +M++ G  PD
Sbjct: 295 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           +   M  FG+ P+  +Y  +I G C+AG + +A+ +  EM      PDV TYN L+ GLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
              +L  AEGLL +M + G+  ++ T+ +LI GYC EG ++KAL +   M  + + P++V
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+++LIDG C+ G++D A  L+ +M  + + P+ V ++ LID   + G +++      EM
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   I P++ T +S+I G  ++G +S    F      K      SP+ + Y  +I     
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFL----QKMMVNKVSPDLITYNTLIHGYIK 238

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           + ++  A KL + M  + ++PD  TY  ++ G      + +   +   M   GI PD   
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298

Query: 546 NQVMVRGYQENGDLKSAFR 564
              M+ G+   G+ K AF+
Sbjct: 299 YMSMINGHVTAGNSKEAFQ 317



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 3/313 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I  F   G + +AL V  ++     LP +   N LLNGL K+ +         EM
Sbjct: 18  IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 77

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D+ T+  LI   C +G + KAL LFD M+++ + P +V Y  LI G+C +  +
Sbjct: 78  RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 137

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  ++  M    + PN  TY+ L+D +C+   V  A  F  EM++  + PN++T+  +
Sbjct: 138 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 197

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C+ G +     F   M    V P++  YN LI G+ K   + +A  L + MEK ++
Sbjct: 198 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 257

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TYN+LI G    G ++ A  + +KM  +GI  +  TY S+I+G+   G+ ++A  
Sbjct: 258 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 317

Query: 351 VCSQMTEKGVEPN 363
           +  +M ++G  P+
Sbjct: 318 LHDEMLQRGFAPD 330



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 153/284 (53%), Gaps = 4/284 (1%)

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M+   EM  F + PD   Y ++I G C  G +  A  +  +M   G L +VVTYN+L++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CKE  +  A  + ++M E+GV P++ TF++LI G C  G +D A+ L+  M+ + L PD
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +V +  LIDG+ + G++ +   L+ +M   +I P+  T S LI    + G++ +A  F  
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E  +K       PN + Y +II+  C  G + K  K    M  + + PD  TY T++ G 
Sbjct: 181 EMINKG----ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++  +M D   LL  M K  + PD V   +++ G+  +G+++ A
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 133/258 (51%), Gaps = 4/258 (1%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L++M   G++ + V Y  +I G+C+ G M  AL V  +M   G  P+VVT+++L++G CK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +  A GL  EM  + + PD+  FT LI G   +G + + L+L+  ML  ++ P + T
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G+ + G +  A + +    D        PNHV Y+ +I + C  GQ+  A    
Sbjct: 124 YNTLIDGMCRQGDLDKANDLW----DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 179

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M +  + P+  TY ++++G  R+  +      L  M+   + PD +    ++ GY + 
Sbjct: 180 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 239

Query: 557 GDLKSAFRCSEFLKESRI 574
             +  AF+    +++ ++
Sbjct: 240 DKMHDAFKLLNMMEKEKV 257


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 284/595 (47%), Gaps = 40/595 (6%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAF 62
           +VL  A+LY  A+ ++K    +L +     +  + V   +++  +   NP+VF  LI  +
Sbjct: 62  HVLVRARLYGYAKSILK----HLAQKNSGSNFLFGVL--MDTYPLCSSNPAVFDLLIRVY 115

Query: 63  SEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
              G +  A+  +  + +    P++  CN ++  ++K  +   VW F+++M+   +  +V
Sbjct: 116 LRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNV 175

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            ++ +LI   C QG + KA+N+   M   G  PT+V Y  L+   C + +   A  +   
Sbjct: 176 SSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M   G+  ++ TYN  +D  C+ +   +      +M +  + PN V++  L++G  K G+
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGK 295

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           +  A   F  M +  + PN+  YN LI+G+C  GN  EA+ L   ME  ++ P+  T   
Sbjct: 296 IGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGT 355

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ GL    + + A  +L++        N +++  +IDG C+ G +++A  +  +M + G
Sbjct: 356 LLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           V P+++TFS LI+G CK GN++ A  + +++  +  VP+ V+F+ LI    K GN+ E +
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------DKTDGGY 468
           + Y  M         FT +SL+  L +NG++  A  F    +           D    GY
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 469 CS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
            +                    P+   Y ++++ LC      +A KL   +    L  D 
Sbjct: 536 ANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +Y T++  + ++  +L+ + L  +MI+  I+PD+     ++ G    G L  AF
Sbjct: 596 ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 234/497 (47%), Gaps = 3/497 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R   + P   + N L+NG +K+GK       + EM+   L  +++TY +LI+  C  G+ 
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +AL L D M    + P  V    L++GL    K   A ++           N  ++  +
Sbjct: 332 EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVM 391

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG C+   ++ A +   EM    + P+++TF VL++G CKVG L  A      + + G 
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGF 451

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +++ LI   CK GN++E M   + M     + D FT N L+  LC  G+L  AE 
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L  + + G++ N VT++ +I+GY   GD   A SV  +M   G  P+  T+ SL+   C
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLC 571

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K  N   A  L  ++    L  D + +  LI  +SK GN+ E +RL++EM++  I P  +
Sbjct: 572 KGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T + ++ GL + GR+  A  F      K      + N ++Y   I  L   GQ   A  L
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKE---ILTLNSIVYTCFIDGLFKAGQSKAALYL 688

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F +M    L  D     ++  G  R  ++     L++      ++P+     +++ GY  
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748

Query: 556 NGDLKSAFRCSEFLKES 572
             D+ S F+    ++ S
Sbjct: 749 GQDIMSCFKLYNLMRRS 765



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 248/519 (47%), Gaps = 13/519 (2%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNAL 90
           V   VFN +  L +   N   ++ LI  +   G+ EEAL +   +E   V P       L
Sbjct: 298 VATRVFNEMIELNLSP-NLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTL 356

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LNGL K  KFD      E   +     + +++ V+ID  C  G + +A  L  EM   G+
Sbjct: 357 LNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGV 416

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P ++ +++LI+G C    + +A+ +   +   G VPN   ++ L+   CKV +V   ++
Sbjct: 417 YPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMK 476

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY  M  +    +  T   L+  LC+ G+L  A  F  H+++ G+ PN   ++C+I+G+ 
Sbjct: 477 FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G+   A S+  +M      P  FTY  L+K LC       A  LL+K++   +  + +
Sbjct: 537 NVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTI 596

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +YN+LI    K G++ +A+ +  +M +  + P+  T++ ++ G  + G +  A      +
Sbjct: 597 SYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRL 656

Query: 391 VIKSLVP-DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           + K ++  + +V+T  IDGL K G  K  L L+KEM E  ++  +  ++S+  G  + G+
Sbjct: 657 MQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGK 716

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           + +A +       KT      PN   +  ++        I+   KL++ MR     P+  
Sbjct: 717 VFSASSLI----SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRL 772

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           TY +++ GL        ++ L   M+KM I   + I+ +
Sbjct: 773 TYHSLILGLCNH----GMLELGIKMLKMFIAESSTIDDL 807



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/529 (22%), Positives = 222/529 (41%), Gaps = 43/529 (8%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
            N   F  +I  ++ +G    A  V+ K+      P+     +LL  L K   F    +  
Sbjct: 524  NSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL 583

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +++    L  D ++Y  LI      G++++A+ LF+EMI   I P    YT ++ GL  E
Sbjct: 584  KKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE 643

Query: 168  NKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++V A     R M++  +  N   Y   +DG  K      AL  + EM    L  +++ 
Sbjct: 644  GRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 227  FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
               + DG  ++G++ +A +         V PN+  +N L+ G+ +  ++     L + M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 287  KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            +    P+  TY+ LI GLC  G LE    +L+    E    + +T+N LI   C+  D++
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 347  KALSVCS-----------------------------------QMTEKGVEPNVVTFSSLI 371
            K + +                                     +M +KG  P    + +++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
               C+ G+I  A  L  +MV   +  D     A++ GL+  G ++E + + + ML  K  
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P+  T ++L+H   K      A N  +      +      + V Y  +I A C +G ++ 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKI----LMEHYRVKLDIVAYNVLISACCANGDVIT 999

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A   + +++   L P+  TY  ++  +     +    ++L D+   G+V
Sbjct: 1000 ALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/564 (22%), Positives = 230/564 (40%), Gaps = 80/564 (14%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEF 106
           N  +FSTLI    ++G++ E +  Y  +  L    A    CN+L+  L + GK     EF
Sbjct: 454 NNVIFSTLIYNSCKVGNVYEGMKFYAAMN-LNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   GLV + VT+  +I+     GD   A ++FD+MI  G  P+   Y  L+  LC 
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCK 572

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP---- 222
                EA  + + +    +  +  +YN L+    K  ++  A+  + EM+ +N+ P    
Sbjct: 573 GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632

Query: 223 --------------------------------NVVTFGVLMDGLCKVGELRAAGNFFVHM 250
                                           N + +   +DGL K G+ +AA   F  M
Sbjct: 633 YTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G+  ++   N + DG+ + G +F A SL S+     + P++ T+NIL+ G      +
Sbjct: 693 EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                L   M + G   N +TY+SLI G C  G +E  + +      +    + +TF+ L
Sbjct: 753 MSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNML 812

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   C+  ++D  + L   M          VF   +D        K+T +   ++L  ++
Sbjct: 813 IRKCCEINDLDKVIDLTHNM---------EVFRVSLD--------KDTQKAVTDVLVRRM 855

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
               + V   +H + K G I                    P    Y  +++ +C  G I 
Sbjct: 856 VSQNYFV--FMHEMLKKGFI--------------------PTSKQYCTMMKRMCRVGDIQ 893

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A KL   M +  +  D+     M+RGL    ++ + M +L  M++M  +P       ++
Sbjct: 894 GAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLM 953

Query: 551 RGYQENGDLKSAFRCSEFLKESRI 574
             + +  + K A      ++  R+
Sbjct: 954 HVFCKKDNFKEAHNLKILMEHYRV 977



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/423 (20%), Positives = 163/423 (38%), Gaps = 82/423 (19%)

Query: 29   RKPHHVCYSVF-NALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAI 84
            R+   VC  +F   L   EI   N  V++  I    + G  + AL++++++E   +   +
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 85   QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
             A N++ +G  + GK  S      +     ++ ++ T+ +L+       D+M    L++ 
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 145  MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS-MRECGVVPNLYTYNALMDGYCKVA 203
            M   G  P  + Y  LI GLCN   +     M +  + E   + +L T+N L+   C++ 
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL-TFNMLIRKCCEIN 820

Query: 204  DVNRALE-----------------------------------FYHEMLHHNLQPNVVTFG 228
            D+++ ++                                   F HEML     P    + 
Sbjct: 821  DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880

Query: 229  VLMDGLCKVGELRAAGNFFVHMAKFGV--------------------------------- 255
             +M  +C+VG+++ A      M   G+                                 
Sbjct: 881  TMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRM 940

Query: 256  --FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
               P    +  L+   CK  N  EA +L   ME + +  D+  YN+LI   C  G +  A
Sbjct: 941  KKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA 1000

Query: 314  EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
                +++ ++G+L N+ TY  L+     +  + +   V   + ++G+       S  +DG
Sbjct: 1001 LDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL------VSGYLDG 1054

Query: 374  QCK 376
            + +
Sbjct: 1055 KSQ 1057



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 115/253 (45%), Gaps = 6/253 (2%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +N   ++ LI  Y ++G +  A++  S M  +G +P+V T + ++    K          
Sbjct: 103 SNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXF 162

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + +M+   + P+V  F  LI  L   G +K+ + +   M      P++ + ++L+    K
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 447 NGRISNALNFFLEKTDK-TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            GR   AL        K      C+     Y   I +LC + +  +   +   MR+  + 
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCT-----YNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  +Y T++ G ++  ++     +  +MI++ + P+ +   +++ GY  NG+ + A R 
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRL 337

Query: 566 SEFLKESRIGSSE 578
            + ++ + +  +E
Sbjct: 338 LDVMEANDVRPNE 350



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 4/183 (2%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           VF  LI    + G +   +  +  ML     PSV+T + ++  + KN R      FF + 
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                     PN   +  +I  LC  G++ KA  + + M  +   P   +Y T+L    +
Sbjct: 167 LTSR----VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             R    ++L+  M   GI  D     + +     N      +   + ++   I  +E  
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 581 GHT 583
            +T
Sbjct: 283 YNT 285


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/409 (34%), Positives = 219/409 (53%), Gaps = 10/409 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL LF E   + +  + V Y +LI G CN + +  A S+ R M   G+  N  T + ++
Sbjct: 9   QALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIIL 67

Query: 197 DGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFG 254
            G C+   V +ALE +   L   + QP+VV++  L++GLCK+G + AA + F  M A  G
Sbjct: 68  QGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG 127

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN F YN L+DG CK   L  A ++ +E  K + +PDV TYN L+  L  +G+++ A 
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 187

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               +M +EG +  +V++N++I G C+   +  AL V ++M ++   PN+VT+S +IDG 
Sbjct: 188 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+  +D A  L   MV +   PD+V +T L+ G S  G +   L L + M+     P V
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + +I  L K GR+ +A   F E         CSPN V Y+A+I   C   ++ +  K
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELV----ANKCSPNVVTYSALIGGYCRASRVDEGGK 363

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           +   MR    RP+  TY TM+ GL    R  +   +  +M + G VPDA
Sbjct: 364 V---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 209/401 (52%), Gaps = 7/401 (1%)

Query: 66  GHIEEALWVYRKIEV-LPAIQAC-NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           G   +AL ++R+    LPA     N L+ G       D+ +    EM + G+  +  T  
Sbjct: 5   GSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTS 64

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           +++   C  G V +AL  FD  ++    +P VV YT LI+GLC   ++  A  +FR M  
Sbjct: 65  IILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVA 124

Query: 183 CG-VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
            G   PN +TYNAL+DG CK   ++ A     E    +  P+VVT+  LM  L ++G + 
Sbjct: 125 AGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVD 184

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F  M + G  P +  +N +I G C+A  L +A+ + +EM   +  P++ TY+++I
Sbjct: 185 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 244

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC   QL+ A+ LL +M  EG   ++V Y  L+ G+   G ++ AL +  +M  +G  
Sbjct: 245 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 304

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+VVT++ +ID  CK G +D A  ++ E+V     P+VV ++ALI G  +   + E  ++
Sbjct: 305 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 364

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +EM      P+V T +++I GL    R   A   F E ++
Sbjct: 365 MREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 402



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 199/409 (48%), Gaps = 13/409 (3%)

Query: 43  NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKK 97
           N  ++P  +   ++ LI  F     ++ A  + R+++V   +Q CN      +L GL + 
Sbjct: 17  NPCQLPA-SSVTYNVLIRGFCNASDLDAAFSLLREMDV-EGMQ-CNDRTTSIILQGLCRC 73

Query: 98  GKFDSVWEFYE-EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVV 155
           G+     E ++  + L     DVV+Y  LI+  C  G V  A +LF +M+  G   P   
Sbjct: 74  GRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAF 133

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  L+ GLC ++++  A ++    R+    P++ TYN LM    ++  V+ AL  + +M
Sbjct: 134 TYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 193

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                 P +V+F  ++ GLC+   L  A   F  M      PN+  Y+ +IDG CK+  L
Sbjct: 194 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 253

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L   M      PD+  Y  L+ G    G+L+ A GLL++M  +G + +VVTY  +
Sbjct: 254 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 313

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID  CK G ++ A  +  ++      PNVVT+S+LI G C+A  +D    +  EM  +  
Sbjct: 314 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR-- 371

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            P+VV +  +I GLS     +E   +++EM E    P   T   L   L
Sbjct: 372 -PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 185/380 (48%), Gaps = 10/380 (2%)

Query: 37  SVFNALNSLEIP--KFNPSVFSTLIIAFSEMGHIEEALWVYRK----IEVLPAIQACNAL 90
           + F+ L  +++   + N    S ++      G + +AL  +          P + +   L
Sbjct: 43  AAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTL 102

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +NGL K G+ D+ ++ + +MV  G    +  TY  L+D  C Q  +  A  +  E   + 
Sbjct: 103 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD 162

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P VV Y  L+  L    ++ EA + F  M E G VP L ++NA++ G C+   +  AL
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADAL 222

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E ++EM+  +  PN+VT+ V++DGLCK  +L  A      M   G  P++  Y  L+ G 
Sbjct: 223 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 282

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
             AG L  A+ L   M      PDV TY ++I  LC VG+++ A  + +++       NV
Sbjct: 283 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 342

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY++LI GYC+   +++   V   M E    PNVVT++++I G       + A G++ E
Sbjct: 343 VTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 399

Query: 390 MVIKSLVPDVVVFTALIDGL 409
           M     VPD   +  L   L
Sbjct: 400 MSECGFVPDARTYRGLKRAL 419



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 196/383 (51%), Gaps = 10/383 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  +FR    C +  +  TYN L+ G+C  +D++ A     EM    +Q N  T  +++
Sbjct: 9   QALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIIL 67

Query: 232 DGLCKVGEL-RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFE 289
            GLC+ G + +A  +F   +      P++  Y  LI+G CK G +  A  L  +M     
Sbjct: 68  QGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG 127

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P+ FTYN L+ GLC   +L+ A  ++ +  K     +VVTYN+L+    + G +++AL
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 187

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +  +QMTE+G  P +V+F+++I G C+A  +  A+ ++ EM+ +   P++V ++ +IDGL
Sbjct: 188 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   + E  +L   M+     P +   + L+ G    GR+ +AL        +     C
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG----C 303

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  +I  LC  G++  A ++F ++ ++   P+  TY+ ++ G  RA R+ +   
Sbjct: 304 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 363

Query: 530 LLADMIKMGIVPDAVINQVMVRG 552
           +   M +M   P+ V    M+ G
Sbjct: 364 V---MREMACRPNVVTYNTMIWG 383



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 7/295 (2%)

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           +AG+  +A+ L  E    ++     TYN+LI+G C    L+ A  LL++M  EG+  N  
Sbjct: 3   RAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           T + ++ G C+ G + +AL       E    +P+VV++++LI+G CK G +DAA  L+ +
Sbjct: 62  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 121

Query: 390 MVIKS-LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           MV      P+   + AL+DGL K   +     +  E  +    P V T ++L+  LF+ G
Sbjct: 122 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLG 181

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           R+  AL  F   T  T+ GY  P  V + AII  LC   ++  A ++F++M   +  P+ 
Sbjct: 182 RVDEALATF---TQMTEEGYV-PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            TY+ ++ GL ++ ++ +   LL  M+  G  PD V    +V G+   G L SA 
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 292



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  ++TL+ A  ++G ++EAL  + ++     +P + + NA++ GL +  +     
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADAL 222

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E + EM+      ++VTY V+ID  C    + +A  L D M+ +G  P +V YT L+ G 
Sbjct: 223 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 282

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++  A  + R M   G +P++ TY  ++D  CKV  V+ A E + E++ +   PNV
Sbjct: 283 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 342

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT+  L+ G C+   +   G     MA     PN+  YN +I G        EA  +  E
Sbjct: 343 VTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 399

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQ 309
           M +    PD  TY  L + L  + Q
Sbjct: 400 MSECGFVPDARTYRGLKRALRMIDQ 424


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 229/428 (53%), Gaps = 7/428 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYTYNAL 195
           A ++FDE++ +GI P V  Y IL++GLC+EN+  EA  +   M + G    P++ +Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++G+ K  D+++    Y+EML   + PNVVT+  ++  LCK   +  A      M K GV
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   YN ++ G C +G   EA+    +M    + PDV TYN L+  LC  G+   A  
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M K G+   + TY +L+ GY  +G + +   +   M   G+ PN   FS L+    
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K   ++ AM ++++M  + L P+ V + A+I  L K G +++ +  +++M++  ++P   
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             +SLIHGL    +   A    LE  D+   G C  N + + +II + C +G+++++ KL
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDR---GIC-LNTIFFNSIIDSHCKEGRVIESEKL 390

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F  M    ++PD  TY+T++ G   A +M +   LLA M+ +G+ PD V    ++ GY +
Sbjct: 391 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCK 450

Query: 556 NGDLKSAF 563
              +K A 
Sbjct: 451 ISRMKDAL 458



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 241/503 (47%), Gaps = 39/503 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + + ++NG  K+G  D  +  Y EM+   +  +VVTY  +I   C    V KA+ +
Sbjct: 86  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M+  G+ P  + Y  ++HG C+  +  EA    + MR  GV P++ TYN+LMD  CK
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A + +  M    L+P + T+G L+ G    G L         M + G+ PN +V
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT------------------------- 296
           ++ L+  + K   + EAM + S+M +  ++P+  T                         
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325

Query: 297 ----------YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                     YN LI GLC   + E AE L+ +M   GI  N + +NS+ID +CKEG + 
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           ++  +   M   GV+P+++T+S+LIDG C AG +D A  L   MV   + PD V ++ LI
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +G  K   MK+ L L++EM  + ++P + T + ++ GLF+  R + A   ++  T     
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              S     Y  I+  LC +     A ++F ++   +L+ +  T+  M+  LL+  R  +
Sbjct: 506 LELST----YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561

Query: 527 VMMLLADMIKMGIVPDAVINQVM 549
              L       G+VP+    ++M
Sbjct: 562 AKDLFVAFSSNGLVPNYWTYRLM 584



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 261/570 (45%), Gaps = 19/570 (3%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLN 92
           YS +N +    I   N   ++++I A  +   +++A+ V     K  V+P     N++++
Sbjct: 108 YSTYNEMLDQRISP-NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 166

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G    G+      F ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G++P
Sbjct: 167 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 226

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            +  Y  L+ G   +  +VE   +   M   G+ PN Y ++ L+  Y K   V  A+  +
Sbjct: 227 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M    L PN VT+G ++  LCK G +  A  +F  M   G+ P   VYN LI G C  
Sbjct: 287 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
                A  L  EM    I  +   +N +I   C  G++  +E L   M + G+  +++TY
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 406

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           ++LIDGYC  G M++A  + + M   G++P+ VT+S+LI+G CK   +  A+ L+ EM  
Sbjct: 407 STLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMES 466

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + PD++ +  ++ GL +         LY  + ++     + T + ++HGL KN    +
Sbjct: 467 SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDD 526

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAA----IIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           AL  F           C  +  L A     +I AL   G+  +A  LF    S+ L P+ 
Sbjct: 527 ALRMF--------QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 578

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TY  M   ++    + ++  L   M   G   D+ +   +VR   + G++  A      
Sbjct: 579 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 638

Query: 569 LKESRIGSSETEGHTTRSFLGHLKPTVYKE 598
           + E        E  T   F+  L    Y+E
Sbjct: 639 IDEKHFS---LEASTASLFIDLLSGGKYQE 665



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++   ++ E+L   I P VF+ + L++GL    R   AL       D  DGG C P+ V 
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMAD--DGGDCPPDVVS 90

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y+ +I     +G + K    +++M    + P+  TY +++  L +A+ +   M +L  M+
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           K G++PD +    +V G+  +G  K A     FLK+ R    E +  T  S + +L
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIV---FLKKMRSDGVEPDVVTYNSLMDYL 203


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 162/476 (34%), Positives = 233/476 (48%), Gaps = 8/476 (1%)

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           ADV T  + I+C C          +   M   G+EPT+V    +++GLC E  +  A  +
Sbjct: 108 ADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWL 167

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M   G   N  TY AL++G CK+ D + ALE   +M+  NL PNVV +  ++DGLCK
Sbjct: 168 VEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCK 227

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC-KAGNLFEAMSLCSEM-EKFEISPDV 294
            G +  A      M    V PN+  YNCLI G C + G   E + L +EM  +  I PDV
Sbjct: 228 RGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDV 287

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T++IL+ G C  G L  AE ++  M + G+  NVVTYNSLI GYC    ME+A+ V   
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347

Query: 355 MTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           M  +G    P+VVT +SLI G CK   +D AM L +EMV K L PDV  +T+LI G  + 
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEV 407

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
                   L+  M E    P++ T + ++ GL K    S A+  F              +
Sbjct: 408 KKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSG----LDLD 463

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V+Y  ++  +C  G++  A KL S +    L+ D+ TY  M++GL R   + D   LL 
Sbjct: 464 IVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLR 523

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
            M + G  P+     V V+G     D+  + +  + +K+       T       FL
Sbjct: 524 KMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFL 579



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 253/536 (47%), Gaps = 26/536 (4%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFD 101
           L+ L    F    FST     S+  H    L   R +E   A+ A +   + ++    F 
Sbjct: 14  LHPLITSLFYSHPFSTSPPPISDAAHRTLLLNSIRTLETADAVVAVD-FFHRMLTLTPFP 72

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN-LFDEMIDKGIEPTVVIYTIL 160
            + +F    +L GLVA    Y   I        ++K L+ L D   D      V    I 
Sbjct: 73  CIQDFN---LLFGLVAKSQHYATAIS-------LIKILHSLGDGSAD------VCTLNIA 116

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+ LC+  K     ++   M + G+ P L T N +++G C   DVN AL    +M +   
Sbjct: 117 INCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGY 176

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N  T+G L++GLCK+G+   A      M K  + PN+ VYN ++DG CK G + EA+ 
Sbjct: 177 HCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALG 236

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCG-VGQLEGAEGLLQKMYKE-GILANVVTYNSLIDG 338
           L  EM    + P+V TYN LI+GLCG  G      GL  +M  E GI+ +V T++ L+DG
Sbjct: 237 LLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDG 296

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI--KSLV 396
           +CKEG + +A SV   M   GVEPNVVT++SLI G C    ++ AM ++  MV   +  +
Sbjct: 297 FCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCL 356

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P VV   +LI G  K   + + + L  EM+   + P VFT +SLI G  +  +   A   
Sbjct: 357 PSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAREL 416

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F   T K  G    PN    A ++  L       +A  LF  M    L  D   Y  ML 
Sbjct: 417 FF--TMKEHGQV--PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLD 472

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           G+ +  ++ D   LL+ ++  G+  D+    +M++G    G L  A      +KE+
Sbjct: 473 GMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKEN 528



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 212/418 (50%), Gaps = 11/418 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA-----LLNGLIKKGKFDSVWEFYEE 109
            +T++      G +  ALW+  K+E L     CNA     L+NGL K G      E  ++
Sbjct: 148 LNTIVNGLCIEGDVNHALWLVEKMENLG--YHCNARTYGALVNGLCKIGDTSGALECLKK 205

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE-N 168
           MV   L  +VV Y  ++D  C +G V +AL L  EM    +EP VV Y  LI GLC E  
Sbjct: 206 MVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFG 265

Query: 169 KMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
              E   +F  M  E G+VP++ T++ L+DG+CK   + RA      M+   ++PNVVT+
Sbjct: 266 GWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTY 325

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFG--VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             L+ G C   ++  A   F  M + G    P++  +N LI G CK   + +AMSL SEM
Sbjct: 326 NSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEM 385

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PDVFT+  LI G C V +   A  L   M + G + N+ T   ++DG  K    
Sbjct: 386 VGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLD 445

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A+++   M + G++ ++V ++ ++DG CK G ++ A  L + +++K L  D   +  +
Sbjct: 446 SEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIM 505

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           I GL ++G + +   L ++M E    P+  + +  + GL +   I+ +  +     DK
Sbjct: 506 IKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDK 563



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 197/377 (52%), Gaps = 10/377 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKK--GKFDSVWE 105
           N  V++ ++    + G + EAL +  ++ V+   P +   N L+ GL  +  G  + V  
Sbjct: 214 NVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGL 273

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F E +   G+V DV T+ +L+D  C +G +++A ++   M+  G+EP VV Y  LI G C
Sbjct: 274 FNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYC 333

Query: 166 NENKMVEAESMFRSM-REC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             ++M EA  +F  M RE  G +P++ T+N+L+ G+CKV +V++A+    EM+   L P+
Sbjct: 334 LRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPD 393

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+  L+ G C+V +  AA   F  M + G  PN+     ++DG  K     EA++L  
Sbjct: 394 VFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFR 453

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M K  +  D+  YNI++ G+C +G+L  A  LL  +  +G+  +  TYN +I G C+EG
Sbjct: 454 AMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREG 513

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A  +  +M E G  PN  +++  + G  +  +I  +      M  K    D     
Sbjct: 514 LLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAE 573

Query: 404 ALIDGLS---KDGNMKE 417
            LI  LS   +D + KE
Sbjct: 574 LLIRFLSANEEDKSFKE 590


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 252/515 (48%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  ++ A    G I +AL V  ++      P     + +L    + G F S     
Sbjct: 158 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 217

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E++   G   DV    ++++  C QG V +AL+L  ++   G EP VV Y  ++ GLC  
Sbjct: 218 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 277

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +    + +   M      PN+ T+N L+   C+     R  E   +M+ H   P++  +
Sbjct: 278 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 337

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN L+ G C A    E   L +EM  
Sbjct: 338 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 397

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M + G + +V+TY ++I+G+CKEG +++
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 457

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   MT  G +PN ++++ ++ G C A     A  L ++M+ +    + + F  LI+
Sbjct: 458 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 517

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 518 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG--- 574

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G+I K  ++F +++   +R D   Y  ++  L +       
Sbjct: 575 -MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 633

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  LA M+  G VP+     +++RG    G +K A
Sbjct: 634 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 668



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  + G ++EAL + R +      P + + NA+L GL    ++  V E  EEMV      
Sbjct: 238 AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 297

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M++ G  P + +Y  +I G+C E  +  A  + 
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN L+ G C         E   EM   +   + VTF +L+D  C+ 
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M + G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC   +   AE L+ +M ++G   N +T+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  D A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 597

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K G    A+ F            C PN   Y 
Sbjct: 598 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG----CVPNESTYT 653

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G + +A ++ +++ S
Sbjct: 654 ILIRGLASEGFVKEAQEMLTELCS 677



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 224/489 (45%), Gaps = 7/489 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA++ G  + G+ +S       +    +  +  TY  ++   C +G +  AL + DEM  
Sbjct: 131 NAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  P   +Y +++   C       A  +   +   G   ++   N +++  C    V+ 
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 247

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    ++     +P+VV++  ++ GLC              M +    PNI  +N LI 
Sbjct: 248 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 307

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C+ G       + ++M +   +PD+  Y  +I G+C  G LE A  +L +M   G+  
Sbjct: 308 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 367

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVV YN+L+ G C     E+   + ++M +K    + VTF+ L+D  C+ G +D  + L 
Sbjct: 368 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 427

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M+    +PDV+ +T +I+G  K+G + E + L K M      P+  + + ++ GL   
Sbjct: 428 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 487

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            R  +A +   +   +     C  N + +  +I  LC  G + +A +L   M  +   PD
Sbjct: 488 ERWVDAEDLMSQMIQQG----CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             +Y+T++ GL +A +  + + LL  M+  G+ P+ +I   +       G +    +  +
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 568 FLKESRIGS 576
            ++++ I S
Sbjct: 604 NIQDTTIRS 612



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 194/398 (48%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++E +    ++   P I   N L++ L + G F+ V E   +MV  G   D+  Y  +
Sbjct: 281 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 340

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C +G +  A  + + M   G++P VV Y  L+ GLC+  +  E E +   M +   
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             +  T+N L+D +C+   V+R +E   +ML H   P+V+T+  +++G CK G +  A  
Sbjct: 401 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 460

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M   G  PN   Y  ++ G C A    +A  L S+M +     +  T+N LI  LC
Sbjct: 461 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 520

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  LL++M   G   ++++Y+++IDG  K G  ++AL + + M  KG+ PN +
Sbjct: 521 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 580

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +SS+     + G I+  + ++  +   ++  D V++ A+I  L K G  +  +     M
Sbjct: 581 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + +   P+  T + LI GL   G +  A     E   K
Sbjct: 641 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 138/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 408 NILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 467

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  + YTI++ GLC+  + V+AE +   M + G   N  T+N L++  CK   V +
Sbjct: 468 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 527

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 528 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 587

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC  G+ E A   L  M   G + 
Sbjct: 588 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG +++A  + +++  KG
Sbjct: 648 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 679


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 221/448 (49%), Gaps = 42/448 (9%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           ++ +CN LL+ L+K+ +F  V EF                                  ++
Sbjct: 194 SVLSCNPLLSALVKENEFGGV-EF----------------------------------VY 218

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
            EMI + I P ++ +  +I+GLC   K+ +A  +   M+  G  PN+ TYN L+DGYCK+
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKM 278

Query: 203 ADVNR---ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
             V +   A     EM+ + + PN VTF VL+DG CK   L AA   F  M   G+ P +
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN L++G C  G L EA  L  EM    + P+V TYN LI G C    LE A  L   
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + K+G+  NV+T+N+L+ GYCK G ME+A  +   M EKG  PN  T++ LI G C+ G 
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGK 458

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           ++    L  EM  + +  D V +  LI    +    K+  RL  EML+  + PS  T + 
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L++G    G +  ALN  L K  + +G +   N V Y  +IQ  C  G++  A+ L ++M
Sbjct: 519 LLNGYCMEGNLRAALN--LRKQMEKEGRWA--NVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               L P+  TY  +   ++    + D+
Sbjct: 575 LEKGLIPNRTTYEIIKEEMMEKGFLPDI 602



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 217/396 (54%), Gaps = 9/396 (2%)

Query: 59  IIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++  +E G +E   +VY+++   ++ P +   N ++NGL K GK +   +  ++M + G 
Sbjct: 205 LVKENEFGGVE---FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGF 261

Query: 116 VADVVTYGVLIDCCCGQGDV---MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             +VVTY  LID  C  G V    KA  +  EM++  + P  V + +LI G C +  +  
Sbjct: 262 WPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSA 321

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F  M+  G+ P + TYN+L++G C    +N A     EML  NL+PNV+T+  L++
Sbjct: 322 ALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALIN 381

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK   L  A   F ++ K G+ PN+  +N L+ G+CK G + EA  L   M +    P
Sbjct: 382 GYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP 441

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TYN LI G C  G++E  + LL +M   G+ A+ VTYN LI  +C++ + +KA  + 
Sbjct: 442 NASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLI 501

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M +KG++P+ +T++ L++G C  GN+ AA+ L  +M  +    +VV +  LI G  + 
Sbjct: 502 DEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRK 561

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           G +++   L  EMLE  + P+  T   +   + + G
Sbjct: 562 GKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           K +P++  F+T+I    ++G + +A  V   ++V    P +   N L++G  K G+   +
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284

Query: 104 WE---FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           ++     +EMV   +  + VT+ VLID  C   ++  AL +F+EM  +G++PTVV Y  L
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           ++GLCNE K+ EA+ +   M    + PN+ TYNAL++GYCK   +  A E +  +    L
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PNV+TF  L+ G CK G++  A      M + G  PN   YNCLI G C+ G + E  +
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L +EM+   +  D  TYNILI   C   + + A  L+ +M  +G+  + +TYN L++GYC
Sbjct: 465 LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC 524

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
            EG++  AL++  QM ++G   NVVT++ LI G C+ G ++ A GL  EM+ K L+P+  
Sbjct: 525 MEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584

Query: 401 VFTALIDGLSKDG 413
            +  + + + + G
Sbjct: 585 TYEIIKEEMMEKG 597



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 232/476 (48%), Gaps = 9/476 (1%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCG--LVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           ++L+  +K     S+   +  + +C     A+ +   +L+         +  L  F    
Sbjct: 128 SILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAG 187

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D   + +V+    L+  L  EN+    E +++ M    + PNL T+N +++G CKV  +N
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLN 247

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCK---VGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +A +   +M      PNVVT+  L+DG CK   VG++  A      M +  V PN   +N
Sbjct: 248 KAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFN 307

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LIDG CK  NL  A+ +  EM+   + P V TYN L+ GLC  G+L  A+ LL +M   
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS 367

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            +  NV+TYN+LI+GYCK+  +E+A  +   + ++G+ PNV+TF++L+ G CK G ++ A
Sbjct: 368 NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L   M+ K  +P+   +  LI G  ++G M+E   L  EM    +     T + LI  
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISA 487

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             +      A     E  DK       P+H+ Y  ++   C +G +  A  L   M  + 
Sbjct: 488 WCEKKEPKKAARLIDEMLDKG----LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              +  TY  +++G  R  ++ D   LL +M++ G++P+    +++     E G L
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 193/359 (53%), Gaps = 8/359 (2%)

Query: 208 ALEF-YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            +EF Y EM+   + PN++TF  +++GLCKVG+L  AG+    M  +G +PN+  YN LI
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272

Query: 267 DGHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
           DG+CK    G +++A ++  EM + ++SP+  T+N+LI G C    L  A  + ++M  +
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ 332

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+   VVTYNSL++G C EG + +A  +  +M    ++PNV+T+++LI+G CK   ++ A
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L+  +  + L P+V+ F  L+ G  K G M+E   L K MLE    P+  T + LI G
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVG 452

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
             + G++    N   E   +        + V Y  +I A C   +  KA++L  +M    
Sbjct: 453 FCREGKMEEVKNLLNEMQCRG----VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           L+P + TY  +L G      +   + L   M K G   + V   V+++GY   G L+ A
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 210/410 (51%), Gaps = 10/410 (2%)

Query: 176 MFRSMRECG--VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           +F S+  C      N    + L+  Y + +     LE +     +  + +V++   L+  
Sbjct: 145 IFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSA 204

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L K  E       +  M +  + PN+  +N +I+G CK G L +A  +  +M+ +   P+
Sbjct: 205 LVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPN 264

Query: 294 VFTYNILIKGLCG---VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           V TYN LI G C    VG++  A+ +L++M +  +  N VT+N LIDG+CK+ ++  AL 
Sbjct: 265 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALK 324

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  +M  +G++P VVT++SL++G C  G ++ A  L  EM+  +L P+V+ + ALI+G  
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K   ++E   L+  + +  +TP+V T ++L+HG  K G++  A  F L+K     G    
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA--FLLQKVMLEKGFL-- 440

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN   Y  +I   C +G++ +   L ++M+   ++ D  TY  ++      K       L
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL-KESRIGSSET 579
           + +M+  G+ P  +   +++ GY   G+L++A    + + KE R  +  T
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT 550



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 38/305 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ LI  F +  ++  AL V+ +++   + P +   N+L+NGL  +GK +      
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL 361

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM+   L  +V+TY  LI+  C +  + +A  LFD +  +G+ P V+ +  L+HG C  
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKF 421

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV---------------------- 205
            KM EA  + + M E G +PN  TYN L+ G+C+   +                      
Sbjct: 422 GKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTY 481

Query: 206 -------------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
                         +A     EML   L+P+ +T+ +L++G C  G LRAA N    M K
Sbjct: 482 NILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEK 541

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G + N+  YN LI G+C+ G L +A  L +EM +  + P+  TY I+ + +   G L  
Sbjct: 542 EGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601

Query: 313 AEGLL 317
            EG L
Sbjct: 602 IEGHL 606



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 153/305 (50%), Gaps = 21/305 (6%)

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL--QKMYKEG 324
           + +C    +F ++S+CS           F  N +I  +  +  +E ++ +L  +   + G
Sbjct: 137 ETNCSISLIFHSLSVCSGQ---------FCANSIIADMLVLAYVENSKTVLGLEAFKRAG 187

Query: 325 ILA---NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
                 +V++ N L+    KE +      V  +M  + + PN++TF+++I+G CK G ++
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLN 247

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDG---LSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            A  +  +M +    P+VV +  LIDG   + + G M +   + KEM+E K++P+  T +
Sbjct: 248 KAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFN 307

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI G  K+  +S AL  F E   +       P  V Y +++  LC +G++ +A  L  +
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQG----LKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M S NL+P+  TY  ++ G  + K + +   L  ++ K G+ P+ +    ++ GY + G 
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 559 LKSAF 563
           ++ AF
Sbjct: 424 MEEAF 428


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 238/461 (51%), Gaps = 12/461 (2%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C  LLN  +K  + +      +E +      + + Y  +I+  C  G V +A  L DEM 
Sbjct: 79  CAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMK 138

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADV 205
           ++G++  V++++ LI GLC + ++ EA   F+SM  EC   PN+ TYN +++G CK   +
Sbjct: 139 ERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS--PNVITYNTVVNGLCKANRI 196

Query: 206 NRALEFYHEM-----LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           + ALE + +M       H  +P+V+++  ++D LCK   +  A  +F  M   G  PN+ 
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ LIDG CK     E + L   M++     ++  +N ++  L    + E A    +++
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K G   NVVTYN  + G CK G +++A  +  +M E  V P+V+T+SS+IDG CKAG +
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  ++T M++   +P  V F  L+ G S+    +E  R++++M+ A   P + T + L
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +  +     + +AL  + +   K       P+   YA +IQ LC   ++ +A +    M 
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKR----QPDCNTYAPLIQCLCRARRVDEAKEFLDVME 492

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           +DN+ P+      ++  L +   + +   +L +++++G  P
Sbjct: 493 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQP 533



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 268/590 (45%), Gaps = 48/590 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++T+I  F + G +++A  +  +++   V   +   + L+ GL +KG+ D   E +
Sbjct: 110 NEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF 169

Query: 108 EEM-VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-----GIEPTVVIYTILI 161
           + M   C    +V+TY  +++  C    + +AL LFD+M  +     G EP V+ Y+ +I
Sbjct: 170 KSMGEECS--PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC   ++ +A   F+ MR  G  PN+ TY++L+DG CKV   +  LE    M      
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N++ F  ++  L K  E   A  FF  + K G  PN+  YN  + G CKAG + EA  +
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM + +++PDV TY+ +I G C  G+++ A+ +  +M     + + VT+ +L+ G+ +
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
                +A  V   M   G  P + T++ L+D  C A ++++A+ +Y +M  K   PD   
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN------ 455
           +  LI  L +   + E       M    + P+     +L+  L K G +  A +      
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527

Query: 456 ------------------FFLEKTDKTDGGYCSPNHVLYAAI----IQALCYDGQILKAS 493
                             +  +K +       SP  V  AA     +  +C  G+  +A 
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAV 587

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++   M    +RPD  TY  +LR L    R+   +     M   G  P  V   +++ G 
Sbjct: 588 EVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI-GE 646

Query: 554 QENGDL-KSAFRCSEFLKESRIGSSET-EGHTTRSFLGHLKPTVYKEQDL 601
             + D+   AFR    + E+ + +  T +  T R+    L+   Y  QDL
Sbjct: 647 ACSADMADEAFR----IFEAMVAAGFTPQAQTMRTLSSCLRDAGY--QDL 690



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 225/468 (48%), Gaps = 11/468 (2%)

Query: 101 DSVWEFYEEM-VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           D  W F++      G   +  T  VL++         +A  L  E ++    P  ++YT 
Sbjct: 57  DVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTT 116

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I+G C   ++ +A  +   M+E GV  ++  ++ L+ G C+   ++ ALE +  M    
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEE 175

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-----AKFGVFPNIFVYNCLIDGHCKAGN 274
             PNV+T+  +++GLCK   +  A   F  M     A  G  P++  Y+ +ID  CKA  
Sbjct: 176 CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 235

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +A      M     +P+V TY+ LI GLC V +      LL  M ++G   N++ +N+
Sbjct: 236 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNA 295

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           ++    K  + EKA     ++ + G +PNVVT++  + G CKAG +D A  +  EMV   
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + PDV+ ++++IDG  K G M +   ++  M+  +  P   T  +L+HG  ++ +   A 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA- 414

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F    D  + G+  P    Y  ++  +C    +  A +++  M+    +PD  TY  +
Sbjct: 415 --FRVHEDMVNAGFI-PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPL 471

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++ L RA+R+ +    L  M    +VP+  I   +V    + G++  A
Sbjct: 472 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 519



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 185/375 (49%), Gaps = 15/375 (4%)

Query: 201 KVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           +V D + A  F+    +    Q N  T  VL++   K      A        +   FPN 
Sbjct: 52  QVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNE 111

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y  +I+G CKAG + +A  L  EM++  +  DV  ++ LI+GLC  G+++ A    + 
Sbjct: 112 IMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 171

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-----GVEPNVVTFSSLIDGQ 374
           M +E    NV+TYN++++G CK   +++AL +   M ++     G EP+V+++S++ID  
Sbjct: 172 MGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CKA  +D A   +  M      P+VV +++LIDGL K     E L L   M E     ++
Sbjct: 231 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINI 290

Query: 435 FTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
              ++++H L+KN     A  FF  L K+ K       PN V Y   +  LC  G++ +A
Sbjct: 291 IDFNAMLHALWKNDEQEKACQFFERLLKSGK------KPNVVTYNVAVHGLCKAGRVDEA 344

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            ++  +M    + PD  TY++++ G  +A RM     +   M+    +P  V    ++ G
Sbjct: 345 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 404

Query: 553 YQENGDLKSAFRCSE 567
           + E+   + AFR  E
Sbjct: 405 FSEHKKSREAFRVHE 419



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K G   N  T   L++ + K    E+A  +  +  E    PN + ++++I+G CKAG +D
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EM  + +  DV++ + LI GL + G + E L  +K M E + +P+V T ++++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVV 187

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGY-CSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +GL K  RI  AL  F +   + +  + C P+ + Y+ +I ALC   ++ KA + F  MR
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +    P+  TY++++ GL +  R  + + LL  M + G   + +    M+    +N + +
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 561 SAFRCSEFLKES 572
            A +  E L +S
Sbjct: 308 KACQFFERLLKS 319


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 236/489 (48%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +  D+ TYG+LI CCC  G +         +I KG     + +T L+ G
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
           LC + +  +A + + R M E G +PN+++YN L+ G C                      
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 201 ----------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
                           K  D ++A   YHEML   + P+VVT+  ++  LCK   +  A 
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M K GV P+   YN ++ G+C +G   EA+    +M    + PDV TY++L+  L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G+   A  +   M K G+   + TY +L+ GY  +G + +   +   M   G+ P+ 
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             FS LI      G +D AM ++++M  + L P+ V + A+I  L K G +++ +  +++
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  ++P     +SLIHGL    +   A    LE  D+   G C  N + + +II + C
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---GIC-LNTIFFNSIIDSHC 487

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++P+  TY T++ G   A +M + M LL+ M+ +G+ P+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 548 TYSTLINGY 556



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 250/499 (50%), Gaps = 7/499 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I  F + G  ++A   Y ++    +LP +   N+++  L K    D   E    MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G++ D +TY  ++   C  G   +A+    +M   G+EP VV Y++L+  LC   + +
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F SM + G+ P + TY  L+ GY     +         M+ + + P+   F +L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
                 G++  A   F  M + G+ PN   Y  +I   CK+G + +AM    +M    +S
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P    YN LI GLC   + E AE L+ +M   GI  N + +NS+ID +CKEG + ++  +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   GV+PNV+T+++LI+G C AG +D AM L + MV   L P+ V ++ LI+G  K
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              M++ L L+KEM  + ++P + T + ++ GLF+  R + A   ++  T+       S 
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               Y  I+  LC +     A ++F ++   +L+ +  T+  M+  LL+  R  +   L 
Sbjct: 619 ----YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674

Query: 532 ADMIKMGIVPDAVINQVMV 550
                 G+VP+    ++M 
Sbjct: 675 VAFSSNGLVPNYWTYRLMA 693



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 229/450 (50%), Gaps = 15/450 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMK 137
           +P + + N LL GL  + +     E    M      G   DVV+Y  +I+    +GD  K
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A + + EM+D+GI P VV Y  +I  LC    M +A  +  +M + GV+P+  TYN+++ 
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC       A+ F  +M    ++P+VVT+ +LMD LCK G    A   F  M K G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            I  Y  L+ G+   G L E   L   M +  I PD + ++ILI      G+++ A  + 
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM ++G+  N VTY ++I   CK G +E A+    QM ++G+ P  + ++SLI G C  
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
              + A  L  EM+ + +  + + F ++ID   K+G + E+ +L++ M+   + P+V T 
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAAIIQALCYDGQILKAS 493
           ++LI+G    G++  A+            G  S    PN V Y+ +I   C   ++  A 
Sbjct: 515 NTLINGYCLAGKMDEAMKLL--------SGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            LF +M S  + PD  TY  +L+GL + +R
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRR 596



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 234/469 (49%), Gaps = 4/469 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   ++NG  K+G  D  +  Y EM+  G++ DVVTY  +I   C    + KA+ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + M+  G+ P  + Y  ++HG C+  +  EA    + MR  GV P++ TY+ LMD  CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A + +  M    L+P + T+G L+ G    G L         M + G+ P+ +V
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           ++ LI  +   G + +AM + S+M +  ++P+  TY  +I  LC  G++E A    ++M 
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            EG+    + YNSLI G C     E+A  +  +M ++G+  N + F+S+ID  CK G + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            +  L+  MV   + P+V+ +  LI+G    G M E ++L   M+   + P+  T S+LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  K  R+ +AL  F E     +    SP+ + Y  I+Q L    +   A +L+  +  
Sbjct: 554 NGYCKISRMEDALVLFKE----MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
              + +  TY  +L GL + K   D + +  ++  M +  +A    +M+
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 260/552 (47%), Gaps = 18/552 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++++I A  +   +++A+ V     K  V+P     N++L+G    G+      F ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  DVVTY +L+D  C  G  M+A  +FD M  +G++P +  Y  L+ G   +  +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           VE   +   M   G+ P+ Y ++ L+  Y     V++A+  + +M    L PN VT+G +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A  +F  M   G+ P   VYN LI G C       A  L  EM    I
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +   +N +I   C  G++  +E L + M + G+  NV+TYN+LI+GYC  G M++A+ 
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S M   G++PN VT+S+LI+G CK   ++ A+ L+ EM    + PD++ +  ++ GL 
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +         LY  + E+     + T + ++HGL KN    +AL  F           C 
Sbjct: 593 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN--------LCL 644

Query: 471 PNHVLYAA----IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
            +  L A     +I AL   G+  +A  LF    S+ L P+  TY  M   ++    + +
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
           +  L   M   G   D+ +   +VR   + G++  A      + E        E  T   
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF---SLEASTASL 761

Query: 587 FLGHLKPTVYKE 598
           F+  L    Y+E
Sbjct: 762 FIDLLSGGKYQE 773



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 9/274 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    ++     A+S  ++M   G   V P++ T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
             LI   C+AG +D        ++ K    D + FT L+ GL  D    + + +  + M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P+VF+ + L+ GL    R   AL       D   GG   P+ V Y  +I     +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG-SPPDVVSYTTVINGFFKE 209

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G   KA   + +M    + PD  TY +++  L +A+ M   M +L  M+K G++PD +  
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             ++ GY  +G  K A     FLK+ R    E +
Sbjct: 270 NSILHGYCSSGQPKEAI---GFLKKMRSDGVEPD 300



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 3/202 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +STLI  + ++  +E+AL +++++E   V P I   N +L GL +  +  +  E
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y  +   G   ++ TY +++   C       AL +F  +    ++     + I+I  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  EA+ +F +    G+VPN +TY  + +       +    + +  M  +    +  
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722

Query: 226 TFGVLMDGLCKVGELRAAGNFF 247
               ++  L + GE+  AG + 
Sbjct: 723 MLNFIVRELLQRGEITRAGTYL 744


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 255/524 (48%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  ++ A    G I +AL V  ++      P     + +L    + G F S     
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E++   G   DV    ++++  C QG V +AL+L  ++   G EP VV Y  ++ GLC  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +    + +   M      PN+ T+N L+   C+     R  E   +M+ H   P++  +
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 300

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN L+ G C A    E   L +EM  
Sbjct: 301 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M + G + +V+TY ++I+G+CKEG +++
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDE 420

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   MT  G +PN ++++ ++ G C A     A  L ++M+ +    + + F  LI+
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG--- 537

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G+I K  ++F +++   +R D   Y  ++  L +       
Sbjct: 538 -MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +  LA M+  G VP+     +++RG    G +K A    E L E
Sbjct: 597 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA---QEMLTE 637



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  + G ++EAL + R +      P + + NA+L GL    ++  V E  EEMV      
Sbjct: 201 AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M++ G  P + +Y  +I G+C E  +  A  + 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN L+ G C         E   EM   +   + VTF +L+D  C+ 
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M + G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC   +   AE L+ +M ++G   N +T+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  D A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K G    A+ F            C PN   Y 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG----CVPNESTYT 616

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G + +A ++ +++ S
Sbjct: 617 ILIRGLASEGFVKEAQEMLTELCS 640



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 225/489 (46%), Gaps = 7/489 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA++ G  + G+ +S       +    +  +  TY  ++   C +G +  AL + DEM  
Sbjct: 94  NAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  P   +Y +++   C       A  +   +   G   ++   N +++  C    V+ 
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    ++     +P+VV++  ++ GLC              M +    PNI  +N LI 
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C+ G       + ++M +   +PD+  Y  +I G+C  G LE A  +L +M   G+  
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 330

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVV YN+L+ G C     E+   + ++M +K    + VTF+ L+D  C+ G +D  + L 
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M+ +  +PDV+ +T +I+G  K+G + E + L K M      P+  + + ++ GL   
Sbjct: 391 EQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            R  +A +   +   +     C  N + +  +I  LC  G + +A +L   M  +   PD
Sbjct: 451 ERWVDAEDLMSQMIQQG----CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             +Y+T++ GL +A +  + + LL  M+  G+ P+ +I   +       G +    +  +
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 568 FLKESRIGS 576
            ++++ I S
Sbjct: 567 NIQDTTIRS 575



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 193/398 (48%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++E +    ++   P I   N L++ L + G F+ V E   +MV  G   D+  Y  +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C +G +  A  + + M   G++P VV Y  L+ GLC+  +  E E +   M +   
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             +  T+N L+D +C+   V+R +E   +ML     P+V+T+  +++G CK G +  A  
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M   G  PN   Y  ++ G C A    +A  L S+M +     +  T+N LI  LC
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  LL++M   G   ++++Y+++IDG  K G  ++AL + + M  KG+ PN +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +SS+     + G I+  + ++  +   ++  D V++ A+I  L K G  +  +     M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + +   P+  T + LI GL   G +  A     E   K
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 138/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  + YTI++ GLC+  + V+AE +   M + G   N  T+N L++  CK   V +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC  G+ E A   L  M   G + 
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG +++A  + +++  KG
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 269/585 (45%), Gaps = 40/585 (6%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           F  +AN+K +++ +   + + E L +      V Y +      LE    +  +F  +I  
Sbjct: 66  FRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQM--KLEGISCSEDLFINVINT 123

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +  +G  E+AL ++ +I      P ++  N LL+ ++ + +F  +   Y  M   G   +
Sbjct: 124 YRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPN 183

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI------------------- 159
           V TY +L+   C    V  A  L  EM +KG EP VV YT                    
Sbjct: 184 VYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSI 243

Query: 160 -----------LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
                      LI+G C E K+ E   +   M E G+ PN+ TY+ ++     + +V  A
Sbjct: 244 RFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELA 303

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L  + +M      PNV TF  LM G    G +  A N +  MA+ G  PN+  YN LI G
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHG 363

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C  G + EA+S+ S+ME+   SP+V TY  LI G    G L GA  +  KM   G + N
Sbjct: 364 LCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPN 423

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV Y S+++  C+     +A S+  +M+     PN VTF++ I G C +G ++ A+ L+ 
Sbjct: 424 VVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFC 483

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M      P++  +  ++DGL K+  +KE L L  EM E  +  ++ T +++  G    G
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVG 543

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS-DNLRPD 507
           +   AL        K   G   P+ + Y  +  A C  G++  A +L   + +     P+
Sbjct: 544 KFEEALKLL----GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              YT++L G+     + + ++ L  M+  GI  +A     +VRG
Sbjct: 600 VAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG 644



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 238/464 (51%), Gaps = 9/464 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D V    ++M L G+      +  +I+     G   +AL +F  + + G +PTV IY  L
Sbjct: 96  DGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHL 155

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +  + +EN+    E ++ +M+  G  PN+YTYN L+   CK   V+ A +   EM +   
Sbjct: 156 LDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGC 215

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           +P+VV++  ++  + K+G++  A    +        PN+ VYN LI+G C+   + E   
Sbjct: 216 EPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFL 270

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  +M +  I P+V TY+ +I  L G+G +E A  +  KM+  G   NV T+ SL+ GY 
Sbjct: 271 LLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF 330

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G + +AL++ ++M E+G EPNVV +++LI G C  G +  A+ + ++M      P+V 
Sbjct: 331 MRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVS 390

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            + ALIDG +K G++     ++ +M+     P+V   +S+++ L ++   S A +     
Sbjct: 391 TYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLI--- 447

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +K     C PN V +   I+ LC  G++  A  LF  M      P+  TY  +L GLL+
Sbjct: 448 -EKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             R+ + + L+ +M + G+  + V    +  G+   G  + A +
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALK 550



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 225/430 (52%), Gaps = 7/430 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++T+I + S++G +EEA  +   I   P +   NAL+NG  ++ K   V+    +MV  G
Sbjct: 222 YTTVISSMSKLGKVEEAREL--SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKG 279

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V+TY  +I    G G+V  AL ++ +M  +G  P V  +T L+ G     +++EA 
Sbjct: 280 IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEAL 339

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           +++  M E G  PN+  YN L+ G C    +  A+    +M  +   PNV T+G L+DG 
Sbjct: 340 NIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGF 399

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K G+L  A   +  M   G  PN+ VY  +++  C++    +A SL  +M      P+ 
Sbjct: 400 AKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNT 459

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N  IKGLC  G++E A  L  +M + G   N+ TYN ++DG  KE  +++AL + ++
Sbjct: 460 VTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTE 519

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M EKG+E N+VT++++  G C  G  + A+ L  +M++  + PD + +  L       G 
Sbjct: 520 MEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGK 579

Query: 415 MKETLRLYKEMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           +K  ++L  ++    K  P V   +SL+ G+     +  A+  +L+K    + G C  N 
Sbjct: 580 VKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV-LYLDKM--LNEGICL-NA 635

Query: 474 VLYAAIIQAL 483
             + A+++ L
Sbjct: 636 ATWNALVRGL 645



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 214/433 (49%), Gaps = 10/433 (2%)

Query: 132 QGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           + D++ A N F  + + K  + T + Y I+I  L  E  +   + + + M+  G+  +  
Sbjct: 56  ETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSED 115

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            +  +++ Y +V    +AL+ ++ +     QP V  +  L+D +      +     + +M
Sbjct: 116 LFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNM 175

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G  PN++ YN L+   CK   +  A  L  EM      PDV +Y  +I  +  +G++
Sbjct: 176 KRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV 235

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A  L  +        NV  YN+LI+G+C+E  +++   +  QM EKG++PNV+T+S++
Sbjct: 236 EEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTV 290

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I      GN++ A+ ++ +M ++   P+V  FT+L+ G    G + E L ++  M E   
Sbjct: 291 ISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF 350

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+V   ++LIHGL  +G++  A++     + K +   CSPN   Y A+I      G ++
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSV----SSKMERNGCSPNVSTYGALIDGFAKAGDLV 406

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            AS++++ M ++   P+   YT+M+  L R+        L+  M      P+ V     +
Sbjct: 407 GASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFI 466

Query: 551 RGYQENGDLKSAF 563
           +G   +G ++ A 
Sbjct: 467 KGLCCSGRVECAI 479


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 251/517 (48%), Gaps = 47/517 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
             S ++ A++++G +++AL VY  +      LP+  ACN+LLN L+K  + ++       
Sbjct: 135 ALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIET------- 187

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYT--ILIHGLC 165
                                       A  L+DEMID+  G +  V  YT  I++ GLC
Sbjct: 188 ----------------------------AHQLYDEMIDRDNGDDICVDNYTTSIMVKGLC 219

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + ++ +   +  S    G VPN+  YN L+DGYCK  +V  A + + ++      P + 
Sbjct: 220 LKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQ 279

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TFG L++G CK+G   A     + M   G+  N+ +YN +ID   K G   +A     EM
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEM 339

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +    PD+ TYN LI   C  G++E AE LL++  + G+  N +TY  L+ GYCK+G+ 
Sbjct: 340 SENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEY 399

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            KA     +M+  G+E +++++ +LI G   AG +D A+ +   M+ + ++PD  ++  L
Sbjct: 400 TKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVL 459

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           ++GL K G +     +  EML+  I P  F  ++L+ G  ++G +  A   F    +K  
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKG- 518

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                P  V Y  +I+     G +  A      MR  +  PD  T++T++ G ++   M 
Sbjct: 519 ---LDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMN 575

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            V+ +   M+K    P+ V    ++ GY   G+ K A
Sbjct: 576 AVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMA 612



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 254/524 (48%), Gaps = 23/524 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  + + G +E A  +++K+++   +P +Q   +L+NG  K G F+++     EM 
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  +V  Y  +ID     G  +KA +   EM +   EP +V Y  LI+  C+  ++ 
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVE 365

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EAE +       G+ PN  TY  L+ GYCK  +  +A ++  EM    L+ +++++G L+
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALI 425

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL   GE+  A      M   G+ P+  +YN L++G  K G L  A  + +EM    I+
Sbjct: 426 HGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIA 485

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F Y  L+ G    G L+ A+ L Q + ++G+   VV YN +I G+ K G M+ A+  
Sbjct: 486 PDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILC 545

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M      P++ TFS++IDG  K  N++A + ++  MV ++  P+VV +T+LI+G  +
Sbjct: 546 IDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCR 605

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCS 470
            G  K   +L+  M    + PSV T S LI    K  ++  A+++F L   +K     C+
Sbjct: 606 KGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK-----CT 660

Query: 471 PNHVLYAAIIQALC--------------YDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           PN   +  ++                  ++         FS M  D        Y  +L 
Sbjct: 661 PNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            L + + +   + L   M+  G+  DAV    ++ G    G+ K
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSK 764



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 208/478 (43%), Gaps = 64/478 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI  F   G +EEA  +  +     + P       L++G  K+G++    ++  EM
Sbjct: 350 TYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEM 409

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D+++YG LI      G+V  AL + D M+++GI P   IY +L++GL  + K+
Sbjct: 410 STSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKL 469

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A+ M   M +  + P+ + Y  L+DG+ +  +++ A + +  ++   L P VV + V+
Sbjct: 470 SMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVM 529

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G  K G +  A      M +    P+IF ++ +IDG+ K  N+   + +   M K   
Sbjct: 530 IKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNC 589

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+V TY  LI G C  G+ + AE L   M   G+  +VVTY+ LI  +CKE  + KA+S
Sbjct: 590 KPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVS 649

Query: 351 VCSQMTEKGVEPNVVTFSSLIDG------------------------------------- 373
               M      PN   F  L++G                                     
Sbjct: 650 YFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWT 709

Query: 374 ------------QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
                        C+   +  A+ L  +M+   L  D V F ALI G+  +GN KE    
Sbjct: 710 QKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE---- 765

Query: 422 YKEMLEAKITPSVFTV----SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++ M+   +      +    S  +      G IS A +  L+   K   GY SPN  L
Sbjct: 766 WRNMISCDLNEGELQIALKYSLELDKFIPEGGISEA-SGILQAMIK---GYVSPNQDL 819



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 187/391 (47%), Gaps = 8/391 (2%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV----VTFGVLMDGLCKVGELR 241
           +P+ Y  N+L++   K   +  A + Y EM+  +   ++     T  +++ GLC  G + 
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIE 225

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                       G  PNI  YN LIDG+CK G +  A  L  +++     P + T+  L+
Sbjct: 226 DGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV 285

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C +G  E  + LL +M   G+  NV  YN++ID   K G   KA     +M+E   E
Sbjct: 286 NGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCE 345

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++VT+++LI+  C  G ++ A  L  + + + L P+ + +T L+ G  K G   +    
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             EM  + +   + +  +LIHGL   G +  AL       D+       P+  +Y  ++ 
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI----RDRMMNRGILPDANIYNVLMN 461

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L   G++  A  + ++M   N+ PD   Y T++ G +R   + +   L   +I+ G+ P
Sbjct: 462 GLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             V   VM++G+ ++G + +A  C + ++ +
Sbjct: 522 GVVGYNVMIKGFSKSGMMDNAILCIDKMRRA 552


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 248/498 (49%), Gaps = 8/498 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++TL+  +   G ++ A  +   + V P       ++ GL  +G+        ++M+  
Sbjct: 146 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    VVTY VL++  C      +A+ + DEM  KG  P +V Y ++I+G+C E ++ +A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 +   G  P+  +Y  ++ G C         E + EM+  N  PN VTF +L+  
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C+ G +  A      M+  G   N  + N +I+  CK G + +A    + M  +  SPD
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  ++KGLC   + E A+ LL++M ++    N VT+N+ I   C++G +E+A  +  
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM+E G E N+VT+++L++G C  G +D+A+ L+  M  K   P+ + +T L+ GL    
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 502

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +     L  EML+    P+V T + L+    + G +  A+    +  +      C+PN 
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG----CTPNL 558

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  ++  +  D    +A +L   + S+ + PD  TY++++  L R  R+ + + +   
Sbjct: 559 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 618

Query: 534 MIKMGIVPDAVI-NQVMV 550
           +  +G+ P AVI N++++
Sbjct: 619 VQDLGMRPKAVIYNKILL 636



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 256/525 (48%), Gaps = 24/525 (4%)

Query: 54  VFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++ +I    + G + EAL      ++R  +  P++     LL  + K   F    E  +
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ--PSVVTYTVLLEAVCKSTGFGQAMEVLD 235

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G   ++VTY V+I+  C +G V  A    + +   G +P  V YT ++ GLC   
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  + E +F  M E   +PN  T++ L+  +C+   V RA++   +M  H    N     
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 355

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++ +CK G +  A  F  +M  +G  P+   Y  ++ G C+A    +A  L  EM + 
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+  T+N  I  LC  G +E A  L+++M + G   N+VTYN+L++G+C +G ++ A
Sbjct: 416 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 475

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +   M  K   PN +T+++L+ G C A  +DAA  L  EM+ K   P+VV F  L+  
Sbjct: 476 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 532

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G M E + L ++M+E   TP++ T ++L+ G+ K+     AL         ++G  
Sbjct: 533 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV--SNG-- 588

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SP+ V Y++II  L  + ++ +A K+F  ++   +RP    Y  +L  L +       +
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
              A M+  G +P+ +    ++ G              +FLKE+R
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLAN----------EDFLKETR 683



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 210/458 (45%), Gaps = 10/458 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   DV     LI   C +G    A  +       G    V  Y  L+ G C   ++  A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +  SM    V P+ YTY  ++ G C    V  AL    +MLH   QP+VVT+ VL++ 
Sbjct: 164 RRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           +CK      A      M   G  PNI  YN +I+G C+ G + +A    + +  +   PD
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  ++KGLC   + E  E L  +M ++  + N VT++ L+  +C+ G +E+A+ V  
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM+  G   N    + +I+  CK G +D A      M      PD + +T ++ GL +  
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 400

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
             ++   L KEM+     P+  T ++ I  L + G I  A     + ++      C  N 
Sbjct: 401 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG----CEVNI 456

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y A++   C  G++  A +LF  M     +P+  TYTT+L GL  A+R+     LLA+
Sbjct: 457 VTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAE 513

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M++    P+ V   V+V  + + G +  A    E + E
Sbjct: 514 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME 551



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 227/482 (47%), Gaps = 10/482 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C  L+  L ++G+              G   DV  Y  L+   C  G +  A  L
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M    + P    YT +I GLC+  ++ EA S+   M   G  P++ TY  L++  CK
Sbjct: 167 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                +A+E   EM      PN+VT+ V+++G+C+ G +  A  F   ++ +G  P+   
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  ++ G C A    +   L +EM +    P+  T+++L++  C  G +E A  +L++M 
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G  AN    N +I+  CK+G ++ A    + M   G  P+ +++++++ G C+A   +
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EMV K+  P+ V F   I  L + G +++   L ++M E     ++ T ++L+
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G    GR+ +AL  F           C PN + Y  ++  LC   ++  A++L ++M  
Sbjct: 464 NGFCVQGRVDSALELFYSMP-------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            +  P+  T+  ++    +   M + + L+  M++ G  P+ +    ++ G  ++ + + 
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576

Query: 562 AF 563
           A 
Sbjct: 577 AL 578



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 10/452 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +++A     ++      P   +   +L GL    +++ V E +
Sbjct: 245 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 304

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+    + + VT+ +L+   C  G V +A+ + ++M   G      +  I+I+ +C +
Sbjct: 305 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 364

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A     +M   G  P+  +Y  ++ G C+      A E   EM+  N  PN VTF
Sbjct: 365 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +  LC+ G +  A      M++ G   NI  YN L++G C  G +  A+ L   M  
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 483

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+  TY  L+ GLC   +L+ A  LL +M ++    NVVT+N L+  +C++G M++
Sbjct: 484 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  QM E G  PN++T+++L+DG  K  N + A+ L   +V   + PD+V ++++I 
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LS++  ++E ++++  + +  + P     + ++  L K      A++FF      ++G 
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV--SNG- 658

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            C PN + Y  +I+ L  +  + +   L  ++
Sbjct: 659 -CMPNELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 7/255 (2%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L+ +    G   +V     LI   C+ G    A  V       G   +V  +++L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C+ G +DAA  L   M +    PD   +T +I GL   G + E L L  +ML     P
Sbjct: 153 GYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T + L+  + K+     A+    E  D+     C+PN V Y  II  +C +G++  A
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAM----EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +  + + S   +PD  +YTT+L+GL  AKR  DV  L A+M++   +P+ V   ++VR 
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 553 YQENGDLKSAFRCSE 567
           +   G ++ A +  E
Sbjct: 326 FCRGGMVERAIQVLE 340


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 253/513 (49%), Gaps = 8/513 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ L+ A  + G ++EA+ +  ++E   V P++     L+NGL +  +F  V     EM 
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  + V    LID  C +G   +A+ LFDEM+ K ++ T V Y ++   LC E +M 
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYC-KVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            AE +   M   G+  +   +N+++ G   +   +   +    EM+   ++PN       
Sbjct: 389 RAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
              LC+    + A   ++ M + G+  NI   N LI G C+  N+  A  +   M    +
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D  TYNI+I+G C   ++E A  L   M ++G   +   +NS+I  YC  G ME+AL 
Sbjct: 509 ELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALH 568

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  QM  +GV+P+VV++ ++IDG CKA +I  A     E++   L P+ V++ ALI G  
Sbjct: 569 LLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYG 628

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           ++GN+   + +   M    I P+  T  SL+H +   G +  A   F E++ K       
Sbjct: 629 RNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMF-EQSRKNS---IE 684

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
              V Y  +IQ LC  G++ +A   F +MRS ++ P+  TYTT++    ++    +   L
Sbjct: 685 VGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKL 744

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             +M+  GIVPD V    +V G+ +   L  A 
Sbjct: 745 FDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAI 777



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 234/496 (47%), Gaps = 39/496 (7%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDC 128
           +A  V       P+++ CNALL  L + G   +  + ++EM  C  V  +  +Y  +I  
Sbjct: 179 DAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKA 238

Query: 129 CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            C  G V     +  ++I  G++                             +  G VP 
Sbjct: 239 LCKVGKVDDGFKILSDLIHAGLQ-----------------------------QSAGAVP- 268

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
              YN LMD  CK   V+ A+     M    + P++VTFG+L++GL +       G    
Sbjct: 269 ---YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLR 325

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G+ PN  + N LID HC+ G+  EA+ L  EM   E+     TYN++ + LC  G
Sbjct: 326 EMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEG 385

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTF 367
           ++E AE +L++M   G+  +   +NS++ G  +  G +E  + + S+M ++G++PN    
Sbjct: 386 EMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALM 445

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           ++     C+      A+G++ +M+ K L  ++    ALI GL +  NMK    + + M+ 
Sbjct: 446 TACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVN 505

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             +     T + +I G  K+ +I  AL     + D    G+  P+  ++ +II A C  G
Sbjct: 506 KGMELDNITYNIMIQGCCKDSKIEEALKL---RDDMIRKGF-KPDAYMFNSIIHAYCDLG 561

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++ +A  L   M+ + ++PD  +Y T++ G  +AK +      L +++  G+ P+AVI  
Sbjct: 562 KMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYN 621

Query: 548 VMVRGYQENGDLKSAF 563
            ++ GY  NG++  A 
Sbjct: 622 ALIGGYGRNGNISGAI 637



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 226/514 (43%), Gaps = 80/514 (15%)

Query: 45  LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK 99
           +E  +  PS+  F  LI          E   + R++E   + P    CN L++   +KG 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA--------------------- 138
           F      ++EMV   + +  VTY ++    C +G++ +A                     
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 139 ---------------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
                          + L  EM+ +G++P   + T     LC   +  EA  ++  M E 
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK 471

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+  N+ T NAL+ G C+  ++  A E    M++  ++ + +T+ +++ G CK  ++  A
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M + G  P+ +++N +I  +C  G + EA+ L  +M+   + PDV +Y  +I G
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C    ++ A   L ++   G+  N V YN+LI GY + G++  A+ V   M   G++P 
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT+ SL+   C AG +D A  ++ +    S+   VV +T +I GL K G M E +  ++
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFE 711

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM    I P+  T ++L++                                       A 
Sbjct: 712 EMRSRSIPPNKITYTTLMY---------------------------------------AY 732

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           C  G   +ASKLF +M S  + PDN +Y T++ G
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTG 766



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 5/189 (2%)

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFT 436
           G++  A+  +  +  +   P V    AL++ L++ GN+  T +++ EM + K +TP+ ++
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGG-YCSPNHVLYAAIIQALCYDGQILKASKL 495
            +S+I  L K G++ +        +D    G   S   V Y  ++ ALC  G++ +A +L
Sbjct: 232 YTSMIKALCKVGKVDDGFKIL---SDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRL 288

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              M    + P   T+  ++ GL R+ R  +V  LL +M  +GI P+ VI   ++  +  
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR 348

Query: 556 NGDLKSAFR 564
            G    A R
Sbjct: 349 KGHFTEAIR 357



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 44/270 (16%)

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV-IKSLVPDVV 400
            G +  A+     ++ +   P+V T ++L++   + GN+ A   ++ EM   K++ P+  
Sbjct: 171 RGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGY 230

Query: 401 VFTALI-------------------------------------DGLSKDGNMKETLRLYK 423
            +T++I                                     D L K G + E +RL  
Sbjct: 231 SYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKG 290

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M E+++ PS+ T   LI+GL ++ R         E     +G   +PN V+   +I   
Sbjct: 291 RMEESRVAPSMVTFGILINGLKRSDRFGEVGALLRE----MEGLGITPNEVICNELIDWH 346

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-VPD 542
           C  G   +A +LF +M S  ++    TY  + R L +   M     +L +M+  G+ +  
Sbjct: 347 CRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406

Query: 543 AVINQVMVRGYQENGDLKSAFR-CSEFLKE 571
            + N V+    Q  G L+S  R  SE +K 
Sbjct: 407 GLFNSVVAGLLQRTGRLESVVRLISEMVKR 436


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 237/443 (53%), Gaps = 4/443 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P+I   + LL+ + K  KFD V  F E+M + G+  ++ TY +LI+C C    +  AL 
Sbjct: 75  FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L  +M+  G EP +V    L++G C+ N++ +A ++   M E G  P+  T+  L+ G  
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A+     M+    QP++VT+G +++GLCK G+   A N    M    +  N+ 
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y+ +ID  CK  +  +A++L +EME   + P+V TY+ LI  LC  G+   A  LL  M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            +  I  N+VT+++LID + K+G + KA  +  +M ++ ++PN+ T+SSLI+G C    +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  +   M+ K  +P+VV +  LI+G  K   + + + L++EM +  +  +  T ++L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG F+     NA   F +           PN + Y  ++  LC +G++ KA  +F  ++
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVG----VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490

Query: 501 SDNLRPDNCTYTTMLRGLLRAKR 523
              + PD  TY  M+ G+ +A +
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 227/438 (51%), Gaps = 10/438 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+ LF  M      P+++ ++ L+  +   NK     S    M   G+  NLYTYN L++
Sbjct: 62  AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VT   L++G C    +  A      M + G  P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181

Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +   +  LI G   H KA    EA++L   M +    PD+ TY  ++ GLC  G  + A 
Sbjct: 182 DTVTFTTLIHGLFLHNKAS---EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL KM    I ANVV Y+++ID  CK    + AL++ ++M  KGV PNV+T+SSLI   
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G    A  L ++M+ + + P++V F+ALID   K G + +  +LY+EM++  I P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT SSLI+G     R+  A    LE   + D   C PN V Y  +I   C   ++ K  +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQ-MLELMIRKD---CLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M    L  +  TYTT++ G  +A+   +  M+   M+ +G+ P+ +   +++ G  
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 555 ENGDLKSAFRCSEFLKES 572
           +NG L  A    E+L+ S
Sbjct: 475 KNGKLAKAMVVFEYLQRS 492



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 175/335 (52%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P       L++GL    K        + MV  G   D+VTYG +++  C +GD   ALNL
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++M    IE  VVIY+ +I  LC      +A ++F  M   GV PN+ TY++L+   C 
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
               + A     +M+   + PN+VTF  L+D   K G+L  A   +  M K  + PNIF 
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI+G C    L EA  +   M + +  P+V TYN LI G C   +++    L ++M 
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G++ N VTY +LI G+ +  D + A  V  QM   GV PN++T++ L+DG CK G + 
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            AM ++  +   ++ PD+  +  +I+G+ K G  K
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 188/364 (51%), Gaps = 4/364 (1%)

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           Y Y  ++       +++ A+  +  M      P+++ F  L+  + K+ +     +F   
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+  N++ YN LI+  C+   L  A++L  +M K    PD+ T N L+ G C   +
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A  L+ +M + G   + VT+ +LI G        +A+++  +M ++G +P++VT+ +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +++G CK G+ D A+ L  +M    +  +VV+++ +ID L K  +  + L L+ EM    
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           + P+V T SSLI  L   GR S+A     +  ++      +PN V ++A+I A    G++
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK----INPNLVTFSALIDAFVKKGKL 339

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           +KA KL+ +M   ++ P+  TY++++ G     R+ +   +L  MI+   +P+ V    +
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 550 VRGY 553
           + G+
Sbjct: 400 INGF 403



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 5/208 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           K NP++  FS LI AF + G + +A  +Y    K  + P I   ++L+NG     +    
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            +  E M+    + +VVTY  LI+  C    V K + LF EM  +G+    V YT LIHG
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                    A+ +F+ M   GV PN+ TYN L+DG CK   + +A+  +  +    ++P+
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           + T+ ++++G+CK G+ +  G +FV  A
Sbjct: 498 IYTYNIMIEGMCKAGKWKMGGIYFVASA 525



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 41/310 (13%)

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +L  GL  + +L+ A GL   M +     +++ ++ L+    K    +  +S   +M   
Sbjct: 49  VLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+  N+ T++ LI+  C+   +  A+ L  +M+     PD+V   +L++G      + + 
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L  +M+E    P   T ++LIHGLF + + S A+       D+     C P+ V Y A
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI----DRMVQRGCQPDLVTYGA 223

Query: 479 IIQALCYDGQI---------LKASK--------------------------LFSDMRSDN 503
           ++  LC  G           ++A+K                          LF++M +  
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +RP+  TY++++  L    R  D   LL+DMI+  I P+ V    ++  + + G L  A 
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343

Query: 564 RC-SEFLKES 572
           +   E +K S
Sbjct: 344 KLYEEMIKRS 353



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 4/195 (2%)

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A+GL+  M      P ++ F+ L+  ++K       +   ++M    I+ +++T + 
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+      R S               GY  P+ V   +++   C+  +I  A  L   M
Sbjct: 119 LINCF---CRCSRLSLALALLGKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                +PD  T+TT++ GL    +  + + L+  M++ G  PD V    +V G  + GD 
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 560 KSAFRCSEFLKESRI 574
             A      ++ ++I
Sbjct: 235 DLALNLLNKMEAAKI 249


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 268/599 (44%), Gaps = 91/599 (15%)

Query: 29  RKPHHVCYSVFNALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PA 83
           R   H   ++F+AL          + S F+ L+ A S  G   +A+  + +++     P 
Sbjct: 112 RLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPT 171

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
               N +L  L+  G        Y  MV  G   +  TY VL+D  C QG    AL +FD
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+D+GI P V IYT+L+  LCN  K+ EA  +  SM++ G +P+  TYNA + G CKV 
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291

Query: 204 DVNRALE-----------------------------------FYHEMLHHNLQPNVVTFG 228
            VN A +                                   +Y  ML  N+ P+VV + 
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++ G  + G +  A +F   M K G  P+ F YN ++   C  G+L  A +L SEM + 
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME-- 346
            +  D  T  I+I GLC  G ++ A  +  +M + G    V+TYN+LIDG+ +EG +E  
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471

Query: 347 ----------------------------------------------KALSVCSQMTEKGV 360
                                                         KA  +   + + GV
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+VVT+++LI+G CKA N+D A+ L+ E+ +K + PD + +  LIDGL +     + + 
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L++ +L++  +PS+   +S++  L +  ++S A+N +L+   K    Y  P      A  
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK---YNFPVESEVLANA 648

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
                DG +    +    +  +     +  YT  L GL + +R  D + +   + + GI
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 19/444 (4%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  ++      G ++ AL L++ M+  G  P    Y +L+ GLC +    +A  MF  M 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G++PN+  Y  L+   C    ++ A++    M      P+ VT+   + GLCKVG + 
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V +   G    +  Y+CLIDG  +A    E       M +  ISPDV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           +G    G++E A   L  M K+G + +   YN+++   C  GD+E+A ++ S+M +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            +  T + +I G CK G +D AM ++ EM      P V+ + ALIDG  ++G ++E   L
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 422 YKEMLEAKITPSVF--------------TVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           + +M E    PS+F              ++  L+H + ++G++  A        D     
Sbjct: 475 FHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG--- 530

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V Y  +I  LC    +  A +LF +++   + PD  TY T++ GLLRA R  D 
Sbjct: 531 -VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 528 MMLLADMIKMGIVPDAVINQVMVR 551
           MML  ++++ G  P   I   M+R
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMR 613



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 210/467 (44%), Gaps = 51/467 (10%)

Query: 141 LFDEMIDK---GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +FD + D    G+  +   +  L+    +  +  +A   F  M E    P  + YN ++ 
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILK 180

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
                  +  AL  Y+ M+     PN  T+ VLMDGLCK G    A   F  M   G+ P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA---- 313
           N+ +Y  L+   C AG + EA+ L   M+     PD  TYN  + GLC VG++  A    
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 314 -------------------EGLLQ-KMYKEG-----------ILANVVTYNSLIDGYCKE 342
                              +GL Q + + EG           I  +VV Y  +I G  + 
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +E ALS    M +KG  P+   +++++   C  G+++ A  L +EM+  +LV D    
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEK 460
           T +I GL K G + E ++++ EM E    P+V T ++LI G ++ GR+  A   F  +E 
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 461 TDK-------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            +        T G     +      ++  +C  GQ+LKA KL   +    + PD  TY T
Sbjct: 481 GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV----RGYQEN 556
           ++ GL +A+ +   + L  ++   GI PD +    ++    R ++EN
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 4/343 (1%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L  +   F  L+      G    A   F  M +F   P  FVYN ++     +G +  A+
Sbjct: 133 LPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLAL 192

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L + M     +P+  TYN+L+ GLC  G    A  +  +M   GI+ NV  Y  L+   
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G +++A+ +   M +KG  P+ VT+++ + G CK G ++ A      +        +
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             ++ LIDGL +     E    YK MLE  I+P V   + +I G  + GRI +AL+F   
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              K   G+  P+   Y  +++ LC  G + +A  L S+M  +NL  D+ T T M+ GL 
Sbjct: 373 MKKK---GFV-PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   + + M +  +M + G  P  +    ++ G+   G L+ A
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 4/304 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  L+  H  AG   +A+   S M++F+  P  F YN ++K L   G +  A  L  +M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   N  TYN L+DG CK+G    AL +  +M ++G+ PNV  ++ L+   C AG I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L   M  K  +PD V + A + GL K G + E  +    + +      +   S L
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+  R      ++    ++      SP+ VLY  +I+     G+I  A      M+
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                PD   Y T+L+ L     +     L ++M++  +V D+    +M+ G  + G + 
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434

Query: 561 SAFR 564
            A +
Sbjct: 435 EAMQ 438



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 173/396 (43%), Gaps = 54/396 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I   +E G IE+AL    V +K   +P     N +L  L   G  +       EM
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   LV D  T  ++I   C +G V +A+ +FDEM + G +PTV+ Y  LI G   E ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 171 VEAESMFRSMRECGVVPNLY--------------TYNALMDGYCKVADVNRALEFYHEML 216
            EA  +F  M E G  P+L+              +   L+   C+   V +A +    ++
Sbjct: 469 EEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSII 527

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+VVT+  L++GLCK   L  A   F  +   G+ P+   Y  LIDG  +A    
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL----LQKMY----KEGILAN 328
           +AM L   + +   SP +  YN +++ LC + +L  A  L    L K Y    +  +LAN
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 329 V---VTYNSLIDG-------------------------YCKEGDMEKALSVCSQMTEKGV 360
               +   SL DG                          C+    + AL +   + E G+
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +      + LI+  C   N++AA+ +    + KS++
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 55/300 (18%)

Query: 51  NPSVFSTLIIAFSEM----------------GHIEEALWVYRKI---EVLPAIQACNALL 91
           NPS+F  L +  +++                G + +A  + R I    V+P +   N L+
Sbjct: 483 NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL K    D     ++E+ L G+  D +TYG LID          A+ LF  ++  G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 152 PTVVIYTILIHGLC------------------------------NENKMVEAESMFRSMR 181
           P++ IY  ++  LC                              N +K +E  S+   +R
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 182 ECGVVPNLY------TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           E   +   Y       Y   + G C+V   + AL  +H +    +        +L++ LC
Sbjct: 663 ELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
               L AA +  ++     +  +  V N L+   C      +A +L   M       DV+
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A +  S    ++L+      GR ++A+  F     + D     P   +Y  I++AL   G
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAF----SRMDEFQSRPTAFVYNTILKALVDSG 186

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            IL A  L++ M +    P+  TY  ++ GL +     D + +  +M+  GI+P+  I  
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246

Query: 548 VMVRGYQENGDLKSAFR 564
           V++      G +  A +
Sbjct: 247 VLLSSLCNAGKIDEAVQ 263


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 249/539 (46%), Gaps = 41/539 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           N  V +TL+    + G + EAL  +R +  +  P +    AL++ L K GKFD       
Sbjct: 91  NAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID--------------------- 147
           EMV  G   D VT+  LID  C  G   +A  + +++I                      
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 148 ---------------KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                          KG  PTV+++ ++I+G C    +  A  +   M E G VPN++T+
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+ G CK   V  A +   +M+     PNVVT+  +++GLCK G++  A   F  M +
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               PN+  +N LIDG CKA  + EA  L   M +   +PD+ TYN LI GLC   Q++ 
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 313 AEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L Q + + G+  AN VTY++L  GY   G M  A  + S + +KG  P++ T++SLI
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              CK       + L  EM  K   P V   +A++ GL +  + +  ++L+  M     T
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 510

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
                 + ++ G+ +  +   AL    +  DK D  + +P+     A++++LC  G+   
Sbjct: 511 DDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF-NPSSSAVDALVESLCQVGKTDD 569

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-AVINQVM 549
           A +L   M          +Y  +L GL R +R  +   +   M+  G  P+ + +N V+
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 628



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 243/506 (48%), Gaps = 46/506 (9%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           +CN  L+ L +  +       +   +    + +  TYG+LI      GD+  A+ L +EM
Sbjct: 24  SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVAD 204
              G E   V++T L+ GLC+  ++VEA   FR+M ++C   P++ TY AL+   CK   
Sbjct: 84  KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA--PDVMTYTALVHALCKAGK 141

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE------------LRAAGN------- 245
            + A     EM+     P+ VTF  L+DGLCK G              R  GN       
Sbjct: 142 FDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 201

Query: 246 ------------------FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
                               V +AK G  P + ++N +I+G CKA +L  A  L   M +
Sbjct: 202 IIQRLCNKYNSVELASKVLGVVIAK-GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+VFT+ ILI GLC   ++  A+ LL+KM   G   NVVTY+++I+G CK+G ++ 
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDD 320

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M  +   PNVVT + LIDG CKA  I+ A  LY  M      PD++ + +LID
Sbjct: 321 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPS-VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           GL K   + E  +L++ + E+ ++ +   T S+L HG    GR+++A   F    DK   
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK--- 437

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G+ SP+   Y ++I   C   + ++  +L  +M S    P   T + +L GL        
Sbjct: 438 GF-SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 496

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRG 552
            + L   M   G   DA+I  ++V G
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEG 522



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 200/398 (50%), Gaps = 6/398 (1%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           N+++ N  +D  C++     AL  +   +     PN  T+G+L+ G    G+L  A    
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M   G   N  V+  L+ G C AG + EA+     M K + +PDV TY  L+  LC  
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKA 139

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+ + A+G+L++M  +G   + VT+++LIDG CK G  E+A  V   + ++G+  +   F
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 368 SSLIDGQC-KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
            ++I   C K  +++ A  +   ++ K   P V++F  +I+G  K  ++    +L + M+
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P+VFT + LI GL K  R+  A        +K   G CSPN V Y+ +I  LC  
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLL----EKMVMGGCSPNVVTYSTVINGLCKQ 315

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           GQ+  A +LF  M   N  P+  T+  ++ GL +AKR+ +   L   M + G  PD +  
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT 584
             ++ G  ++  +  AF+  + + ES + ++    ++T
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 413



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 204/405 (50%), Gaps = 11/405 (2%)

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC  N+  EA ++FR+      +PN +TY  L+ G+    D++ A++   EM     + N
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V    LM GLC  G +  A   F  MAK    P++  Y  L+   CKAG   EA  +  
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC-KE 342
           EM     +PD  T++ LI GLC  G  E A  +L+ + + G+  +   + ++I   C K 
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +E A  V   +  KG  P V+ F+ +I+G CKA ++D+A  L   M+ K  VP+V  F
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEK 460
           T LI GL K   + E  +L ++M+    +P+V T S++I+GL K G++ +A   F  +E+
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +      C PN V +  +I  LC   +I +A +L+  MR     PD  TY +++ GL +
Sbjct: 331 RN------CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 521 AKRMLDVMMLLADMIKMGI-VPDAVINQVMVRGYQENGDLKSAFR 564
           + ++ +   L   + + G+   +AV    +  GY   G +  A R
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR 429



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 216/474 (45%), Gaps = 19/474 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFD 101
           F P+V  F+ +I  F +   ++ A   Y+ +EV+      P +     L+ GL K  +  
Sbjct: 228 FTPTVLMFNLVINGFCKAKDLDSA---YKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              +  E+MV+ G   +VVTY  +I+  C QG V  A  LF  M  +   P VV + ILI
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC   ++ EA  ++  MRE G  P++ TYN+L+DG CK   V+ A + +  +    + 
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404

Query: 222 P-NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N VT+  L  G   +G +  A   F  +   G  P++  Y  LI  +CK     E + 
Sbjct: 405 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 464

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  EM      P V T + ++ GL      E A  L   M   G   + + YN +++G  
Sbjct: 465 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 524

Query: 341 KEGDMEKALSVCSQMTEK---GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           +    +KAL+V  Q+ +K      P+     +L++  C+ G  D A  L  +M  +    
Sbjct: 525 RASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAA 584

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            V  +  L+ GLS+     E  ++++ M+ A   P + TV+ +I  L    ++ +A    
Sbjct: 585 AVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL- 643

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +++  K     C P+      +I   C  G+   A KL  +M    L P++ T+
Sbjct: 644 VQRMSKLG---CCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 694



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 43/373 (11%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLN 92
           Y +F  +     P  N    + LI    +   IEEA  +Y   R+    P I   N+L++
Sbjct: 322 YELFQLMERRNCPP-NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 93  GLIKKGKFDSVWEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           GL K  + D  ++ ++ +   G+  A+ VTY  L       G +  A  +F  ++DKG  
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 440

Query: 152 PTVVIYTILI-----------------------------------HGLCNENKMVEAESM 176
           P +  YT LI                                    GL   N    A  +
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 500

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH---HNLQPNVVTFGVLMDG 233
           F SM   G   +   YN +++G  + +  ++AL    +++        P+      L++ 
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVES 560

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+VG+   A      M++ G    +  YN L+ G  +     EA  +   M     +P+
Sbjct: 561 LCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPE 620

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + T N++I  LC   +++ A  L+Q+M K G   ++ T N+LI GYCK G  + A  +  
Sbjct: 621 ISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLE 680

Query: 354 QMTEKGVEPNVVT 366
           +MTE G+EPN  T
Sbjct: 681 EMTEAGLEPNDTT 693



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 33/312 (10%)

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +  +  +  +VF+ N  +  LC + + + A  L +       + N  TY  LI G+   G
Sbjct: 12  DWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAG 71

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           D++ A+ +  +M   G E N V  ++L+ G C AG +  A+  +  M  K   PDV+ +T
Sbjct: 72  DLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYT 130

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           AL+  L K G   E   + +EM+     P   T S+LI GL K G    A     +   +
Sbjct: 131 ALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQR 190

Query: 464 ----TDGGY-------C---------------------SPNHVLYAAIIQALCYDGQILK 491
               +D  +       C                     +P  +++  +I   C    +  
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A KL   M      P+  T+T ++ GL +A R+ +   LL  M+  G  P+ V    ++ 
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310

Query: 552 GYQENGDLKSAF 563
           G  + G +  A+
Sbjct: 311 GLCKQGQVDDAY 322


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/410 (33%), Positives = 213/410 (51%), Gaps = 2/410 (0%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           + L+    + G IEEAL ++Y +    P     NAL+NGL + G      E  + M+  G
Sbjct: 273 NVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              DV TY  LI   C  G++ +A+ +   M+ +  EP  V Y  LI  LC EN +  A 
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAAT 392

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            + R +   GV+P++ T+N+L+ G C  ++   A+E + EM      P+  T+ +L++ L
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C    L+ A      M   G   N+ VYN LIDG CK   + +A  +  +ME   +S   
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN LI GLC   ++E A  L+ +M  EG+  +  TY +++  +C++GD+++A  +   
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MT  G EP++VT+ +LI G CKAG +D A  L   + +K +V     +  +I  L K   
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDK 463
            KE +RL++EM+E    P V T   +  GL    G I  A++F +E  +K
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 246/521 (47%), Gaps = 15/521 (2%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSV 103
           P F+PS    L+           AL +++     P   A     + LL  L + G FDS+
Sbjct: 55  PDFSPS---QLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSM 111

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYTILI 161
                +M    +  D  T+ + ++       +   +N    ++++   ++P    Y + +
Sbjct: 112 LTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVAL 171

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             L   NK+   E++   M    V P++ T+N L+   CK   +  A+    +M ++ L+
Sbjct: 172 SLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLR 231

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+  TF  LM G  +  ++  A      M + G        N L++G CK G + EA+  
Sbjct: 232 PDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF 291

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             E E F   PD  T+N L+ GLC  G ++    ++  M ++G   +V TYNSLI G CK
Sbjct: 292 IYEEEGF--CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCK 349

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G++++A+ +   M  +  EPN VT+++LI   CK  +++AA  L   +  K ++PDV  
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCT 409

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F +LI GL    N +  + L++EM E    P  FT S LI  L    R+  AL    E  
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE-- 467

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
              +   C+ N V+Y  +I  LC + ++  A  +F  M    +   + TY T++ GL ++
Sbjct: 468 --MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS 525

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           KR+ +   L+  MI  G+ PD      M++ + + GD+K A
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 256/557 (45%), Gaps = 39/557 (7%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALL 91
           ++   ++S +IP  + S F   +  ++   H+        L + R   V P  +  N  L
Sbjct: 113 TLLRQMHSSKIP-VDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVAL 171

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           + L+K  K   V   + +MV   +  DV T+ +LI   C    +  A+ + ++M + G+ 
Sbjct: 172 SLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLR 231

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P    +T L+ G   E  +  A  +   M E G      + N L++G CK   +  AL F
Sbjct: 232 PDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF 291

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            +E       P+ VTF  L++GLC+ G ++        M + G   +++ YN LI G CK
Sbjct: 292 IYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCK 349

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA+ +   M   +  P+  TYN LI  LC    +E A  L + +  +G+L +V T
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCT 409

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +NSLI G C   + E A+ +  +M EKG +P+  T+S LI+  C    +  A+ L  EM 
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           +     +VVV+  LIDGL K+  + +   ++ +M    ++ S  T ++LI+GL K+ R+ 
Sbjct: 470 LSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVE 529

Query: 452 NA----------------------LNFFLEKTDKTDGGY---------CSPNHVLYAAII 480
            A                      L +F ++ D               C P+ V Y  +I
Sbjct: 530 EAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLI 589

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC  G++  ASKL   ++   +      Y  +++ L + KR  + M L  +M++ G  
Sbjct: 590 GGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDP 649

Query: 541 PDAVINQVMVRGYQENG 557
           PD +  +++ RG    G
Sbjct: 650 PDVITYKIVFRGLCNGG 666



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 237/493 (48%), Gaps = 25/493 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC-------NALLNGLIKKGKFDSVWEF 106
            F+TL+  F E   +E AL    +I+ L     C       N L+NGL K+G+ +    F
Sbjct: 236 TFTTLMQGFIEEADVEGAL----RIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF 291

Query: 107 -YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            YEE   C    D VT+  L++  C  G + + L + D M++KG E  V  Y  LI GLC
Sbjct: 292 IYEEEGFC---PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA  +   M      PN  TYN L+   CK   V  A E    +    + P+V 
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TF  L+ GLC       A   F  M + G  P+ F Y+ LI+  C    L EA+ L  EM
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E    + +V  YN LI GLC   ++  AE +  +M   G+  + VTYN+LI+G CK   +
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E+A  +  QM  +G++P+  T+++++   C+ G+I  A  +   M +    PD+V +  L
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 406 IDGLSKDGNMKETLRLYK--EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           I GL K G +    +L +  +M    +TP  +  + +I  L K  R   A+  F E  +K
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAY--NPVIQALCKRKRTKEAMRLFREMMEK 646

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS-DMRSDNLRPDNCTYTTMLRGLLRAK 522
            D     P+ + Y  + + LC  G  ++ +  F+ +M    + P+  ++  +  GL  + 
Sbjct: 647 GD----PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC-SL 701

Query: 523 RMLDVMMLLADMI 535
            M D ++ L +M+
Sbjct: 702 SMEDTLIQLINMV 714



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 170/342 (49%), Gaps = 8/342 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI    +  H+E A  + R +    VLP +   N+L+ GL      +   E +
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELF 430

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EEM   G   D  TY +LI+  C +  + +AL L  EM   G    VV+Y  LI GLC  
Sbjct: 431 EEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKN 490

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N++ +AE +F  M   GV  +  TYN L++G CK   V  A +   +M+   L+P+  T+
Sbjct: 491 NRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS--EM 285
             ++   C+ G+++ A +   +M   G  P+I  Y  LI G CKAG +  A  L    +M
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQM 610

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG-D 344
           +   ++P    YN +I+ LC   + + A  L ++M ++G   +V+TY  +  G C  G  
Sbjct: 611 KGMVLTPQA--YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGP 668

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +++A+    +M EKG+ P   +F  L +G C     D  + L
Sbjct: 669 IQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 248/498 (49%), Gaps = 8/498 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++TL+  +   G ++ A  +   + V P       ++ GL  +G+        ++M+  
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    VVTY VL++  C      +A+ + DEM  KG  P +V Y ++I+G+C E ++ +A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 +   G  P+  +Y  ++ G C         E + EM+  N  PN VTF +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C+ G +  A      M+  G   N  + N +I+  CK G + +A    + M  +  SPD
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  ++KGLC   + E A+ LL++M ++    N VT+N+ I   C++G +E+A  +  
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM+E G E N+VT+++L++G C  G +D+A+ L+  M  K   P+ + +T L+ GL    
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 471

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +     L  EML+    P+V T + L+    + G +  A+    +  +      C+PN 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG----CTPNL 527

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  ++  +  D    +A +L   + S+ + PD  TY++++  L R  R+ + + +   
Sbjct: 528 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 587

Query: 534 MIKMGIVPDAVI-NQVMV 550
           +  +G+ P AVI N++++
Sbjct: 588 VQDLGMRPKAVIYNKILL 605



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 264/547 (48%), Gaps = 26/547 (4%)

Query: 54  VFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++ +I    + G + EAL      ++R  +  P++     LL  + K   F    E  +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ--PSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G   ++VTY V+I+  C +G V  A    + +   G +P  V YT ++ GLC   
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  + E +F  M E   +PN  T++ L+  +C+   V RA++   +M  H    N     
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++ +CK G +  A  F  +M  +G  P+   Y  ++ G C+A    +A  L  EM + 
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+  T+N  I  LC  G +E A  L+++M + G   N+VTYN+L++G+C +G ++ A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +   M  K   PN +T+++L+ G C A  +DAA  L  EM+ K   P+VV F  L+  
Sbjct: 445 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G M E + L ++M+E   TP++ T ++L+ G+ K+     AL         ++G  
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV--SNG-- 557

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SP+ V Y++II  L  + ++ +A K+F  ++   +RP    Y  +L  L +       +
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE--TEGHTTRS 586
              A M+  G +P+ +    ++ G              +FLKE+R    E  + G   ++
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLAN----------EDFLKETRDLLRELCSRGVLNKN 667

Query: 587 FLGHLKP 593
            L   +P
Sbjct: 668 LLEEWRP 674



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 217/484 (44%), Gaps = 10/484 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA L  LI +          +     G   DV     LI   C +G    A  +      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G    V  Y  L+ G C   ++  A  +  SM    V P+ YTY  ++ G C    V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    +MLH   QP+VVT+ VL++ +CK      A      M   G  PNI  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+ G + +A    + +  +   PD  +Y  ++KGLC   + E  E L  +M ++  + 
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VT++ L+  +C+ G +E+A+ V  QM+  G   N    + +I+  CK G +D A    
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M      PD + +T ++ GL +    ++   L KEM+     P+  T ++ I  L + 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I  A     + ++      C  N V Y A++   C  G++  A +LF  M     +P+
Sbjct: 404 GLIEQATMLIEQMSEHG----CEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPN 456

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TYTT+L GL  A+R+     LLA+M++    P+ V   V+V  + + G +  A    E
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 568 FLKE 571
            + E
Sbjct: 517 QMME 520



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 227/482 (47%), Gaps = 10/482 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C  L+  L ++G+              G   DV  Y  L+   C  G +  A  L
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M    + P    YT +I GLC+  ++ EA S+   M   G  P++ TY  L++  CK
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                +A+E   EM      PN+VT+ V+++G+C+ G +  A  F   ++ +G  P+   
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  ++ G C A    +   L +EM +    P+  T+++L++  C  G +E A  +L++M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G  AN    N +I+  CK+G ++ A    + M   G  P+ +++++++ G C+A   +
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EMV K+  P+ V F   I  L + G +++   L ++M E     ++ T ++L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G    GR+ +AL  F           C PN + Y  ++  LC   ++  A++L ++M  
Sbjct: 433 NGFCVQGRVDSALELFYSMP-------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            +  P+  T+  ++    +   M + + L+  M++ G  P+ +    ++ G  ++ + + 
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545

Query: 562 AF 563
           A 
Sbjct: 546 AL 547



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 223/454 (49%), Gaps = 10/454 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +++A     ++      P   +   +L GL    +++ V E +
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+    + + VT+ +L+   C  G V +A+ + ++M   G      +  I+I+ +C +
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A     +M   G  P+  +Y  ++ G C+      A E   EM+  N  PN VTF
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +  LC+ G +  A      M++ G   NI  YN L++G C  G +  A+ L   M  
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 452

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+  TY  L+ GLC   +L+ A  LL +M ++    NVVT+N L+  +C++G M++
Sbjct: 453 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  QM E G  PN++T+++L+DG  K  N + A+ L   +V   + PD+V ++++I 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LS++  ++E ++++  + +  + P     + ++  L K      A++FF      ++G 
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV--SNG- 627

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            C PN + Y  +I+ L  +  + +   L  ++ S
Sbjct: 628 -CMPNELTYITLIEGLANEDFLKETRDLLRELCS 660


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 217/405 (53%), Gaps = 4/405 (0%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           + L D M+ KG +P +V Y ++++GLC       A ++   M +  + P +  YN ++DG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   ++ AL  + EM    ++PNVVT+  L+  LC  G    A      M +  + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +F ++ LID   K G L EA  L  EM K  I P + TY+ LI G C   +L+ A+ + +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +    +VVTYN+LI G+CK   +E+ + V  +M+++G+  N VT++ LI G  +AG
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           + D A  ++ EMV   + P+++ +  L+DGL K+G +++ + +++ +  +K+ P+++T +
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +I G+ K G++ +  + F   + K       P+ V Y  +I   C  G   +A  LF +
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKG----VKPDVVAYNTMISGFCRKGSKEEADALFKE 356

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           M+ D   P++  Y T++R  LR         L+ +M   G   DA
Sbjct: 357 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 401



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 199/367 (54%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +     ++NGL K+G  D  +    +M    L   V+ Y  +ID  C    +  ALNL
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM  KGI P VV Y+ LI  LCN  +  +A  +   M E  + P+++T++AL+D + K
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  A + Y EM+  ++ P++VT+  L++G C    L  A   F  M     FP++  
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G CK   + E M +  EM +  +  +  TYNILI+GL   G  + A+ + ++M 
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G+  N++TYN+L+DG CK G +EKA+ V   +    +EP + T++ +I+G CKAG ++
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
               L+  + +K + PDVV +  +I G  + G+ +E   L+KEM E    P+    ++LI
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373

Query: 442 HGLFKNG 448
               ++G
Sbjct: 374 RARLRDG 380



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 214/387 (55%), Gaps = 6/387 (1%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            FN LN +E  K  P V  ++T+I    +  H+++AL +++++E   + P +   ++L++
Sbjct: 35  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 94

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L   G++        +M+   +  DV T+  LID    +G +++A  L+DEM+ + I+P
Sbjct: 95  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++V Y+ LI+G C  +++ EA+ MF  M      P++ TYN L+ G+CK   V   +E +
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            EM    L  N VT+ +L+ GL + G+   A   F  M   GV PNI  YN L+DG CK 
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L +AM +   +++ ++ P ++TYNI+I+G+C  G++E    L   +  +G+  +VV Y
Sbjct: 275 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 334

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++I G+C++G  E+A ++  +M E G  PN   +++LI  + + G+ +A+  L  EM  
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETL 419
                D      L+  +  DG + ++ 
Sbjct: 395 CGFAGDASTI-GLVTNMLHDGRLDKSF 420



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 216/424 (50%), Gaps = 7/424 (1%)

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + MV  G   D+VTYGV+++  C +GD   A NL ++M    +EP V+IY  +I GLC  
Sbjct: 5   DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M +A ++F+ M   G+ PN+ TY++L+   C     + A     +M+   + P+V TF
Sbjct: 65  KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+D   K G+L  A   +  M K  + P+I  Y+ LI+G C    L EA  +   M  
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDV TYN LIKG C   ++E    + ++M + G++ N VTYN LI G  + GD + 
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 244

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M   GV PN++T+++L+DG CK G ++ AM ++  +    + P +  +  +I+
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G+ K G +++   L+  +    + P V   +++I G  + G    A   F E   K DG 
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGT 362

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT---YTTMLRGLLRAKRM 524
              PN   Y  +I+A   DG    +++L  +MRS     D  T    T ML      K  
Sbjct: 363 L--PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 420

Query: 525 LDVM 528
           LD++
Sbjct: 421 LDML 424



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 217/423 (51%), Gaps = 24/423 (5%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P+L TY  +++G CK  D + A    ++M    L+P V+ +  ++DGLCK   +  A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            N F  M   G+ PN+  Y+ LI   C  G   +A  L S+M + +I+PDVFT++ LI  
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
               G+L  AE L  +M K  I  ++VTY+SLI+G+C    +++A  +   M  K   P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVT+++LI G CK   ++  M ++ EM  + LV + V +  LI GL + G+      ++K
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQ 481
           EM+   + P++ T ++L+ GL KNG++  A+  F  L+++         P    Y  +I+
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK------MEPTIYTYNIMIE 304

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            +C  G++     LF ++    ++PD   Y TM+ G  R     +   L  +M + G +P
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESR----IGSSET---------EGHTTRSFL 588
           ++     ++R    +GD +++   +E +KE R     G + T         +G   +SFL
Sbjct: 365 NSGCYNTLIRARLRDGDREAS---AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 421

Query: 589 GHL 591
             L
Sbjct: 422 DML 424



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 195/359 (54%), Gaps = 4/359 (1%)

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M+    QP++VT+GV+++GLCK G+   A N    M +  + P + +YN +IDG CK  
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           ++ +A++L  EME   I P+V TY+ LI  LC  G+   A  LL  M +  I  +V T++
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 125

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LID + KEG + +A  +  +M ++ ++P++VT+SSLI+G C    +D A  ++  MV K
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              PDVV +  LI G  K   ++E + +++EM +  +  +  T + LI GLF+ G    A
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              F E    +DG    PN + Y  ++  LC +G++ KA  +F  ++   + P   TY  
Sbjct: 246 QEIFKEMV--SDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           M+ G+ +A ++ D   L  ++   G+ PD V    M+ G+   G  + A    + +KE 
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           M+L   M      PD+ TY +++ GLC  G  + A  LL KM +  +   V+ YN++IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK   M+ AL++  +M  KG+ PNVVT+SSLI   C  G    A  L ++M+ + + PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  F+ALID   K+G + E  +LY EM++  I PS+ T SSLI+G   + R+  A   F 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               K    +C P+ V Y  +I+  C   ++ +  ++F +M    L  +  TY  +++GL
Sbjct: 181 FMVSK----HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +A        +  +M+  G+ P+ +    ++ G  +NG L+ A    E+L+ S++
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 248/498 (49%), Gaps = 8/498 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++TL+  +   G ++ A  +   + V P       ++ GL  +G+        ++M+  
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G    VVTY VL++  C      +A+ + DEM  KG  P +V Y ++I+G+C E ++ +A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 +   G  P+  +Y  ++ G C         E + EM+  N  PN VTF +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C+ G +  A      M+  G   N  + N +I+  CK G + +A    + M  +  SPD
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  ++KGLC   + E A+ LL++M ++    N VT+N+ I   C++G +E+A  +  
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           QM+E G E N+VT+++L++G C  G +D+A+ L+  M  K   P+ + +T L+ GL    
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 471

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +     L  EML+    P+V T + L+    + G +  A+    +  +      C+PN 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG----CTPNL 527

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           + Y  ++  +  D    +A +L   + S+ + PD  TY++++  L R  R+ + + +   
Sbjct: 528 ITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 587

Query: 534 MIKMGIVPDAVI-NQVMV 550
           +  +G+ P AVI N++++
Sbjct: 588 VQDLGMRPKAVIYNKILL 605



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 263/547 (48%), Gaps = 26/547 (4%)

Query: 54  VFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++ +I    + G + EAL      ++R  +  P++     LL  + K   F    E  +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ--PSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           EM   G   ++VTY V+I+  C +G V  A    + +   G +P  V YT ++ GLC   
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           +  + E +F  M E   +PN  T++ L+  +C+   V RA++   +M  H    N     
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           ++++ +CK G +  A  F  +M  +G  P+   Y  ++ G C+A    +A  L  EM + 
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+  T+N  I  LC  G +E A  L+++M + G   N+VTYN+L++G+C +G ++ A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L +   M  K   PN +T+++L+ G C A  +DAA  L  EM+ K   P+VV F  L+  
Sbjct: 445 LELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G M E + L ++M+E   TP++ T ++L+ G+  +     AL         ++G  
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV--SNG-- 557

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SP+ V Y++II  L  + ++ +A K+F  ++   +RP    Y  +L  L +       +
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE--TEGHTTRS 586
              A M+  G +P+ +    ++ G              +FLKE+R    E  + G   ++
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLAN----------EDFLKETRDLLRELCSRGVLNKN 667

Query: 587 FLGHLKP 593
            L   +P
Sbjct: 668 LLEEWRP 674



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 217/484 (44%), Gaps = 10/484 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA L  LI +          +     G   DV     LI   C +G    A  +      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G    V  Y  L+ G C   ++  A  +  SM    V P+ YTY  ++ G C    V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    +MLH   QP+VVT+ VL++ +CK      A      M   G  PNI  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+ G + +A    + +  +   PD  +Y  ++KGLC   + E  E L  +M ++  + 
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VT++ L+  +C+ G +E+A+ V  QM+  G   N    + +I+  CK G +D A    
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M      PD + +T ++ GL +    ++   L KEM+     P+  T ++ I  L + 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I  A     + ++      C  N V Y A++   C  G++  A +LF  M     +P+
Sbjct: 404 GLIEQATMLIEQMSEHG----CEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPN 456

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TYTT+L GL  A+R+     LLA+M++    P+ V   V+V  + + G +  A    E
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 568 FLKE 571
            + E
Sbjct: 517 QMME 520



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 226/482 (46%), Gaps = 10/482 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C  L+  L ++G+              G   DV  Y  L+   C  G +  A  L
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M    + P    YT +I GLC+  ++ EA S+   M   G  P++ TY  L++  CK
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                +A+E   EM      PN+VT+ V+++G+C+ G +  A  F   ++ +G  P+   
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  ++ G C A    +   L +EM +    P+  T+++L++  C  G +E A  +L++M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G  AN    N +I+  CK+G ++ A    + M   G  P+ +++++++ G C+A   +
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EMV K+  P+ V F   I  L + G +++   L ++M E     ++ T ++L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G    GR+ +AL  F           C PN + Y  ++  LC   ++  A++L ++M  
Sbjct: 433 NGFCVQGRVDSALELFYSMP-------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            +  P+  T+  ++    +   M + + L+  M++ G  P+ +    ++ G   + + + 
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545

Query: 562 AF 563
           A 
Sbjct: 546 AL 547



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 222/454 (48%), Gaps = 10/454 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +++A     ++      P   +   +L GL    +++ V E +
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+    + + VT+ +L+   C  G V +A+ + ++M   G      +  I+I+ +C +
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A     +M   G  P+  +Y  ++ G C+      A E   EM+  N  PN VTF
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +  LC+ G +  A      M++ G   NI  YN L++G C  G +  A+ L   M  
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 452

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+  TY  L+ GLC   +L+ A  LL +M ++    NVVT+N L+  +C++G M++
Sbjct: 453 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  QM E G  PN++T+++L+DG     N + A+ L   +V   + PD+V ++++I 
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LS++  ++E ++++  + +  + P     + ++  L K      A++FF      ++G 
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV--SNG- 627

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            C PN + Y  +I+ L  +  + +   L  ++ S
Sbjct: 628 -CMPNELTYITLIEGLANEDFLKETRDLLRELCS 660


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 237/479 (49%), Gaps = 5/479 (1%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           + GK         EM   GLV    T   ++D   G G V  A N+F EM  +G+ P  V
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            + +++   CN  +++EAE    +M E G + +  T   ++D +C+   VNR + ++ +M
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +   L PNV+ F  L++GLCK G ++ A      M + G  PN++ +  LIDG CK G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 276 FEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            +A  L  ++ + +   P+V TY  +I G C   +L  AE LL +M ++G++ N  TY +
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+CK G+  +A  +   M ++G  PN+ T++++IDG CK G++D A  L  ++ +  
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L  D V +T L+    +  +   +L  + +ML+   TP + + ++LI    +  ++  + 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F E           P    Y ++I   C  G    A KLF  M +    PD+ TY  +
Sbjct: 526 RLFEEAVSLG----LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           + GL +  ++ D   L   M+  G+ P  V    +   Y +  D  +A    + L++ +
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 239/465 (51%), Gaps = 8/465 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   +++ F+E G ++EA+ +  +++   ++ + Q  N +L+  +  G  +     + EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D V++ +++  CC  G V++A    + M+++G        T++I   C +  +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                 F  M E G+ PN+  + AL++G CK   + +A E   EM+    +PNV T   L
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 231 MDGLCKVGELRAAGNFFVHMAKF-GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G    A   F+ + +  G  PN+  Y  +I+G+CK   L  A  L S M++  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+  TY  LI G C VG    A  L+  M KEG   N+ TYN++IDG CK+G +++A 
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++++  G++ + VT++ L+   C+  + + ++  + +M+     PD+  +T LI   
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXF 515

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   MKE+ RL++E +   + P+  T +S+I G  + G  S A+  F   ++      C
Sbjct: 516 CRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG----C 571

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +P+ + Y A+I  LC + ++  A  L+  M    L P   T  T+
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 212/413 (51%), Gaps = 10/413 (2%)

Query: 57  TLII-AFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           TLII AF + G++   +   W   ++ + P +    AL+NGL K+G     +E  EEMV 
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMV 171
            G   +V T+  LID  C +G   KA  LF +++   G +P V  YT +I+G C E+K+ 
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +   M+E G+VPN  TY  L+DG+CKV +  RA E    M      PN+ T+  ++
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAII 442

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DGLCK G L  A      ++  G+  +   Y  L+  HC+  +   ++   ++M K   +
Sbjct: 443 DGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT 502

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ +Y  LI   C   Q++ +E L ++    G++    TY S+I GYC+ G+   A+ +
Sbjct: 503 PDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKL 562

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             +M+  G  P+ +T+ +LI G CK   +D A  LY  M+ K L P +V   T   +   
Sbjct: 563 FQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCK 622

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           KD +      L  + LE +    + TV++L+  L   G++  A  FF +  DK
Sbjct: 623 KDDSSTAINVL--DRLEKR--QWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 197/419 (47%), Gaps = 5/419 (1%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           +K +E    +   ++       K+ EA +M   M+  G+V +  T N ++D    +  V 
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVE 206

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + EM    + P+ V+F +++   C +G +  A  +   M + G   +      +I
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLII 266

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           D  C+ G +   +    +M +  ++P+V  +  LI GLC  G ++ A  LL++M + G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            NV T+ +LIDG CK+G  EKA  +  ++    G +PNV T++++I+G CK   ++ A  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L + M  + LVP+   +T LIDG  K GN      L   M +   +P+++T +++I GL 
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G +  A        +K        + V Y  ++   C      ++   F+ M      
Sbjct: 447 KKGSLDEAYRLL----NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT 502

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD  +YTT++    R K+M +   L  + + +G++P       M+ GY   G+   A +
Sbjct: 503 PDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 146/287 (50%), Gaps = 12/287 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N + ++TLI    ++G+   A   Y  ++++      P I   NA+++GL KKG  D  +
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRA---YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
               ++ + GL AD VTY +L+   C Q D  ++L  F++M+  G  P +  YT LI   
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXF 515

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + +M E+E +F      G++P   TY +++ GYC+  + + A++ +  M +H   P+ 
Sbjct: 516 CRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDS 575

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+G L+ GLCK  +L  A N +  M   G+ P       L   +CK  +   A+++   
Sbjct: 576 ITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDR 635

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           +EK +    + T N L++ LC  G+L+ A     K+  +    N VT
Sbjct: 636 LEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 12/209 (5%)

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A+ +  EM  + LV        ++D     G ++    ++ EM +  ++P   + 
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 438 SSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             ++      GR+  A   LN  +E+    D   C+        II A C  G + +   
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCT-------LIIDAFCQKGYVNRVVG 280

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F  M    L P+   +T ++ GL +   +     LL +M++ G  P+   +  ++ G  
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340

Query: 555 ENGDLKSAFRCSEFLKESRIGSSETEGHT 583
           + G  + AFR   FLK  R    +   HT
Sbjct: 341 KKGWTEKAFRL--FLKLVRSDGYKPNVHT 367


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 234/463 (50%), Gaps = 26/463 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I     +L  L+K   + +    + +M L G+ +++VT  +LI+C    G    + ++
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  ++ KG +P V+  T LI GLC +                       +Y  L++G CK
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLK----------------------VSYGTLINGLCK 155

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V     AL+    +    +QPNVV +  ++D +CKV  +  A + +  M   G+ P++  
Sbjct: 156 VGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVT 215

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G    G L +A+ L ++M    I PDV+T+NIL+ G C  G+++  + +   M 
Sbjct: 216 YSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 275

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+GI  NVVTY SL+DGYC    + KA S+ + M + GV P+  +++ +I+G CK   +D
Sbjct: 276 KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+ +M  K+++P+VV +T+LIDGL K G +   L+L  EM +  + P + T SS++
Sbjct: 336 EAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL----YAAIIQALCYDGQILKASKLFS 497
             L KN ++  A+    +  D+         + L    Y  +IQ  C  G   +A  L S
Sbjct: 396 DALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLS 455

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            M  +   PD  TY  ++  L +         LL +MI  G++
Sbjct: 456 KMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 226/442 (51%), Gaps = 24/442 (5%)

Query: 29  RKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQ 85
           +   H   S FN L   + P      F  ++ +  ++     A+ ++R++E   +   + 
Sbjct: 37  KNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLV 96

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT-------------YGVLIDCCCGQ 132
             N L+N   + G+    +  +  ++  G   +V+T             YG LI+  C  
Sbjct: 97  TLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKV 156

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G    AL L   +  K ++P VV+Y  +I  +C    + EA  ++  M   G+ P++ TY
Sbjct: 157 GQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTY 216

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           +AL+ G+  V  +  A++ +++M+  N++P+V TF +L+DG CK G+++     F  M K
Sbjct: 217 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 276

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN+  Y  L+DG+C    + +A S+ + M +  ++PD  +YNI+I G C + +++ 
Sbjct: 277 QGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDE 336

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L +KM+ + I+ NVVTY SLIDG CK G +  AL +  +M ++GV P+++T+SS++D
Sbjct: 337 AMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILD 396

Query: 373 GQCKAGNIDAAMGLYT--------EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             CK   +D A+ L T        ++ +K    DV  +T +I G    G   E L L  +
Sbjct: 397 ALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSK 456

Query: 425 MLEAKITPSVFTVSSLIHGLFK 446
           M +    P   T   +I  LFK
Sbjct: 457 MEDNGRIPDAKTYEIIILSLFK 478



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 217/424 (51%), Gaps = 25/424 (5%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K   P +  +  ++  L   N    A S+ R M   G+  NL T N L++ + ++     
Sbjct: 54  KNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPL 113

Query: 208 ALEFYHEMLHHNLQPNVVT-------------FGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +   +  +L     PNV+T             +G L++GLCKVG+ RAA      +    
Sbjct: 114 SFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKL 173

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V PN+ +YN +ID  CK   + EA  L SEM    ISPDV TY+ LI G   VG+L+ A 
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  KM  E I  +V T+N L+DG+CK+G M++  +V + M ++G++PNVVT+ SL+DG 
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C    ++ A  ++  M    + PD   +  +I+G  K   + E + L+K+M    I P+V
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA-- 492
            T +SLI GL K+G+IS AL    E  D+       P+ + Y++I+ ALC + Q+ KA  
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRG----VPPDIITYSSILDALCKNHQVDKAIA 409

Query: 493 ------SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
                  ++F D+       D   YT M++G        + + LL+ M   G +PDA   
Sbjct: 410 LLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469

Query: 547 QVMV 550
           ++++
Sbjct: 470 EIII 473



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 200/417 (47%), Gaps = 26/417 (6%)

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           IYT+    +   ++     S  R + +    P ++ +  ++    K+   + A+  + +M
Sbjct: 27  IYTLNYITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQM 86

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               +  N+VT  +L++   ++G+   + + F ++ K G  PN+     LI G C     
Sbjct: 87  ELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK--- 143

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
                               +Y  LI GLC VGQ   A  LL+++  + +  NVV YN++
Sbjct: 144 -------------------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTI 184

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ID  CK   + +A  + S+M  +G+ P+VVT+S+LI G    G +  A+ L+ +M+++++
Sbjct: 185 IDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENI 244

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            PDV  F  L+DG  KDG MKE   ++  M++  I P+V T  SL+ G     +++ A +
Sbjct: 245 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 304

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            F    +    G  +P+   Y  +I   C   ++ +A  LF  M   N+ P+  TYT+++
Sbjct: 305 IF----NTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            GL ++ ++   + L+ +M   G+ PD +    ++    +N  +  A      LK+ 
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 250/539 (46%), Gaps = 41/539 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           N  V +TL+    + G + EAL  +R +  +  P +    AL++ L K GKFD       
Sbjct: 43  NAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 102

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID--------------------- 147
           EM+  G   D VT+  LID  C  G   +A  + +++I                      
Sbjct: 103 EMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 162

Query: 148 ---------------KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                          KG  PTV+++ ++I+G C    +  A  +   M E G VPN++T+
Sbjct: 163 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 222

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+ G CK   V  A +   +M+     PNVVT+  +++GLCK G++  A   F  M +
Sbjct: 223 TILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 282

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               PN+  +N LIDG CKA  + EA  L   M +   +PD+ TYN LI GLC   Q++ 
Sbjct: 283 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 342

Query: 313 AEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L Q + + G+  AN VTY++L  GY   G M  A  + S + +KG  P++ T++SLI
Sbjct: 343 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
              CK       + L  EM  K   P V   +A++ GL +  + +  ++L+  M     T
Sbjct: 403 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 462

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
                 + ++ G+ +  + + AL    +  DK D  + +P+     A++++LC  G+   
Sbjct: 463 DDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF-NPSSSAVDALVESLCQVGRTDD 521

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-AVINQVM 549
           A +L   M          +Y  +L GL R +R  +   +   M+  G  P+ + +N V+
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 580



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 231/471 (49%), Gaps = 46/471 (9%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TYG+LI      GD+  A+ L +EM   G E   V++T L+ GLC+  ++VEA   FR+M
Sbjct: 11  TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70

Query: 181 -RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
            ++C   P++ TY AL+   CK    + A     EM+     P+ VTF  L+DGLCK G 
Sbjct: 71  AKDCA--PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128

Query: 240 ------------LRAAGN-------------------------FFVHMAKFGVFPNIFVY 262
                        R  GN                           V +AK G  P + ++
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK-GFTPTVLMF 187

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N +I+G CKA +L  A  L   M +    P+VFT+ ILI GLC   ++  A+ LL+KM  
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   NVVTY+++I+G CK+G ++ A  +   M  +   PNVVT + LIDG CKA  I+ 
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS-VFTVSSLI 441
           A  LY  M      PD++ + +LIDGL K   + E  +L++ + E+ ++ +   T S+L 
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HG    GR+++A   F    DK   G+ SP+   Y ++I   C   + ++  +L  +M S
Sbjct: 368 HGYAALGRMADACRIFSMLVDK---GF-SPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
               P   T + +L GL         + L   M   G   DA+I  ++V G
Sbjct: 424 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 474



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 194/383 (50%), Gaps = 11/383 (2%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +PN +TY  L+ G+    D++ A++   EM  +  + N V    LM GLC  G +  A  
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  MAK    P++  Y  L+   CKAG   EA  +  EM     +PD  T++ LI GLC
Sbjct: 66  HFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC-KEGDMEKALSVCSQMTEKGVEPNV 364
             G  E A  +L+ + + G+  +   + ++I   C K   +E A  V   +  KG  P V
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           + F+ +I+G CKA ++D+A  L   M+ K  VP+V  FT LI GL K   + E  +L ++
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQA 482
           M+    +P+V T S++I+GL K G++ +A   F  +E+ +      C PN V +  +I  
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVVTHNILIDG 298

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-VP 541
           LC   +I +A +L+  MR     PD  TY +++ GL ++ ++ +   L   + + G+   
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358

Query: 542 DAVINQVMVRGYQENGDLKSAFR 564
           +AV    +  GY   G +  A R
Sbjct: 359 NAVTYSTLFHGYAALGRMADACR 381



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PN  T+G+L+ G    G+L  A      M   G   N  V+  L+ G C AG + EA+  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M K + +PDV TY  L+  LC  G+ + A+G+L++M   G   + VT+++LIDG CK
Sbjct: 67  FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC-KAGNIDAAMGLYTEMVIKSLVPDVV 400
            G  E+A  V   + ++G+  +   F ++I   C K  +++ A  +   ++ K   P V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           +F  +I+G  K  ++    +L + M+E    P+VFT + LI GL K  R+  A       
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL--- 242

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            +K   G CSPN V Y+ +I  LC  GQ+  A +LF  M   N  P+  T+  ++ GL +
Sbjct: 243 -EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
           AKR+ +   L   M + G  PD +    ++ G  ++  +  AF+  + + ES + ++   
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 581 GHTT 584
            ++T
Sbjct: 362 TYST 365



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 214/474 (45%), Gaps = 19/474 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFD 101
           F P+V  F+ +I  F +   ++ A   Y+ +EV+      P +     L+ GL K  +  
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSA---YKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              +  E+MV  G   +VVTY  +I+  C QG V  A  LF  M  +   P VV + ILI
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC   ++ EA  ++  MRE G  P++ TYN+L+DG CK   V+ A + +  +    + 
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356

Query: 222 -PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N VT+  L  G   +G +  A   F  +   G  P++  Y  LI  +CK     E + 
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  EM      P V T + ++ GL      E A  L   M   G   + + YN +++G  
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476

Query: 341 KEGDMEKALSVCSQMTEK---GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           +     KAL+V  Q+ +K      P+     +L++  C+ G  D A  L  +M  +    
Sbjct: 477 RASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAA 536

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            V  +  L+ GLS+     E  ++++ M+ A   P + TV+ +I  L    ++ +A    
Sbjct: 537 AVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYE-L 595

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           +++  K     C P+      +I   C  G+   A KL  +M    L P++ T+
Sbjct: 596 VQRMSKLG---CCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 646



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 229/502 (45%), Gaps = 43/502 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N ++NG  K    DS ++  E M+  G V +V T+ +LI   C    V +A  L
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++M+  G  P VV Y+ +I+GLC + ++ +A  +F+ M      PN+ T+N L+DG CK
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIF 260
              +  A + YH M      P+++T+  L+DGLCK  ++  A   F  + + GV   N  
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ L  G+   G + +A  + S +     SPD+                          
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL-------------------------- 395

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                     TY SLI  YCK     + + +  +M  KG  P V T S+++ G  +  + 
Sbjct: 396 ---------ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA---KITPSVFTV 437
           + A+ L+  M  +    D +++  +++G+++     + L + +++++    K  PS   V
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAV 506

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            +L+  L + GR  +A     + +++      S  + L + + +   +D    +A+++F 
Sbjct: 507 DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWD----EATQVFE 562

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M S    P+  T   ++  L  A ++ D   L+  M K+G  PD      ++ GY ++G
Sbjct: 563 AMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 622

Query: 558 DLKSAFRCSEFLKESRIGSSET 579
               A +  E + E+ +  ++T
Sbjct: 623 RADLARKLLEEMTEAGLEPNDT 644


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 280/579 (48%), Gaps = 51/579 (8%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIK-KGKFD-- 101
           P  + ++F   + A+   G    AL V++K   +++ P +  CN LL GL++    F   
Sbjct: 127 PPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIA 186

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTIL 160
           S  E +++MV  G+  DV T+ VL++  C +G +  AL + + M+ +  + P  V Y  +
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +  +  + ++ + + +   M+  G+VPN  TYN L+ GYCK+  +  A +    M   N+
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            P++ T+ +L++G+C  G +R        M    + P++  YN LIDG  + G   EA  
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGY 339
           L  +ME   + P+  T+NI +K LC   + E     ++++ +  G   ++VTY++LI  Y
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            K GD+  AL +  +M +KG++ N +T ++++D  CK   +D A  L      +  + D 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  LI G  ++  +++   ++ EM   KITP+V T +SLI GL  +G+   A+    E
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM----E 542

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN----------- 508
           K D+       P+   + +II   C +G++ KA + +++    + +PDN           
Sbjct: 543 KFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602

Query: 509 -----------------------CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
                                   TY TM+    + K++ +   LL++M +  + PD   
Sbjct: 603 KEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFT 662

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE--SRIGSSETEGH 582
              ++    E+G L  A    E LK+   + GS +   H
Sbjct: 663 YNSIITSLMEDGKLSEA---DELLKKFSGKFGSMKRNLH 698



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 224/459 (48%), Gaps = 12/459 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLC---NENKMVEAESMFRSMRECGVVPNLYTYNA 194
           AL +F +MI   ++P ++    L+ GL    +   +  A  +F  M + GV  ++ T+N 
Sbjct: 150 ALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNV 209

Query: 195 LMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           L++GYC    +  AL     M+   N+ P+ VT+  ++  + K G L    +  + M + 
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRN 269

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ PN   YN L+ G+CK G+L EA  +   M++  I PD+ TYNILI G+C  G +   
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREG 329

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L+  M    +  +VVTYN+LIDG  + G   +A  +  QM   GV+PN VT +  +  
Sbjct: 330 LELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKW 389

Query: 374 QCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
            CK    +       E+V +    PD+V +  LI    K G++   L + +EM +  I  
Sbjct: 390 LCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T+++++  L K  ++  A N  L+   K   GY   + V Y  +I     + ++ KA
Sbjct: 450 NTITLNTILDALCKERKVDEAHNL-LDSAHKR--GYIV-DEVTYGTLIMGYFREEKVEKA 505

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +++ +M+   + P   T+ +++ GL    +    M    ++ + G++PD      ++ G
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           Y + G ++ AF   EF  ES   S + + +T    L  L
Sbjct: 566 YCKEGRVEKAF---EFYNESIKHSFKPDNYTCNILLNGL 601



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 170/349 (48%), Gaps = 18/349 (5%)

Query: 45  LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK 99
           +E+  F+P +  + TLI A+ ++G +  AL + R++    +       N +L+ L K+ K
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D      +     G + D VTYG LI     +  V KA  ++DEM    I PTV  +  
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI GLC+  K   A   F  + E G++P+  T+N+++ GYCK   V +A EFY+E + H+
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            +P+  T  +L++GLCK G    A NFF  +        +  YN +I   CK   L EA 
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTV-TYNTMISAFCKDKKLKEAY 645

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L SEME+  + PD FTYN +I  L   G+L  A+ LL+K            ++      
Sbjct: 646 DLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK------------FSGKFGSM 693

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
            +   +E   +  +  +++ ++   + +S +I+  C  G +      YT
Sbjct: 694 KRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLKEHSTSYT 742



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 12/202 (5%)

Query: 381 DAAMGLYTEMVIKSL----VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           DA++ L   ++  +L     P   +F   +      G     L+++++M+  K+ P++ T
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLT 168

Query: 437 VSSLIHGLFK---NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            ++L+ GL +   +  I++A   F    D    G  S +   +  ++   C +G++  A 
Sbjct: 169 CNTLLIGLVRYPSSFSIASAREVF---DDMVKIG-VSLDVKTFNVLVNGYCLEGKLEDAL 224

Query: 494 KLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +   M S+ N+ PDN TY T+L+ + +  R+ DV  LL DM + G+VP+ V    +V G
Sbjct: 225 GMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYG 284

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
           Y + G LK AF+  E +K++ I
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNI 306



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/248 (18%), Positives = 112/248 (45%), Gaps = 12/248 (4%)

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVE----PNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           SL+  Y +  D   +LS+C+ +    +     P+   F   +     AG    A+ ++ +
Sbjct: 99  SLLVSYIRTSDA--SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQK 156

Query: 390 MVIKSLVPDVVVFTALIDGLSK---DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           M+   L P+++    L+ GL +     ++     ++ +M++  ++  V T + L++G   
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCL 216

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G++ +AL        + +    +P++V Y  I++A+   G++     L  DM+ + L P
Sbjct: 217 EGKLEDALGMLERMVSEFN---VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVP 273

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +  TY  ++ G  +   + +   ++  M +  I+PD     +++ G    G ++      
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELM 333

Query: 567 EFLKESRI 574
           + +K  ++
Sbjct: 334 DVMKSLKL 341


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 275/554 (49%), Gaps = 45/554 (8%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
             P VFS   LI  FS+ G +++A  ++ K+E   ++P +   ++L+NGL K  + D   
Sbjct: 220 LGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAE 279

Query: 105 EFYEEMVLCGLVADVVTYGVLI-----------------------------------DCC 129
               +MV  G+  + +TY  LI                                      
Sbjct: 280 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL 339

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G + +A ++FD M+ KG +P V+ Y  L+HG      +   +++F  M   GVVP+ 
Sbjct: 340 CKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDR 399

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + +N L++ Y ++  ++++L  + +M    + P+++TF  ++   C++G L  A   F H
Sbjct: 400 HVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNH 459

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT-YNILIKGLCGVG 308
           M   GV P+  VY+CLI G C   +L +A  L S+M    I P     +  +I  LC  G
Sbjct: 460 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 519

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++   + ++  +   G   N++T+NSL+DGYC  G+M++A+ +   M   GVEP++ T++
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 579

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +L+DG CK G ID A+ L+ +M+ K +    V +  ++ GL +         ++ EM+E+
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            +  S+ T ++++ GL +N   ++  N  LEK    +  +   + + +  +I+A+   G+
Sbjct: 640 GMAVSIHTYATVLGGLCRNN-CTDEANMLLEKLFSMNVKF---DILTFNIVIRAMFKVGR 695

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
             +A +LF+ + +  L P   TY  M+  L++ +   D   L + M K    PD+ I   
Sbjct: 696 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 755

Query: 549 MVRGYQENGDLKSA 562
           ++R     G++  A
Sbjct: 756 IIRMLLNKGEVAKA 769



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 260/573 (45%), Gaps = 81/573 (14%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           E  P I   N L+N   +  + D     +  ++  GL  DV +Y  LID    +G+V KA
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            +LF +M ++GI P VV Y+ LI+GLC   +M +AE + R M   GV PN  TYN L+ G
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303

Query: 199 Y-----------------------------------CKVADVNRALEFYHEMLHHNLQPN 223
           Y                                   CK   +  A + +  M+    +P+
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+++G L+ G    G +    N F  M   GV P+  V+N LI+ + + G + +++ +  
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M K  ++PD+ T++ +I   C +G+L+ A      M   G+  +   Y+ LI G C   
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483

Query: 344 DMEKALSVCSQMTEKGV------------------------------------EPNVVTF 367
           D+ KA  + S M  KG+                                     PN++TF
Sbjct: 484 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 543

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +SL+DG C  GN+  A+GL   M    + PD+  +  L+DG  K G + + L L+++ML 
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 603

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            ++T +  + + ++HGLF+  R   A   F E     + G     H  YA ++  LC + 
Sbjct: 604 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHE---MIESGMAVSIHT-YATVLGGLCRNN 659

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
              +A+ L   + S N++ D  T+  ++R + +  R  +   L A +   G+VP  +  +
Sbjct: 660 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 719

Query: 548 VMV------RGYQENGDLKSAFRCSEFLKESRI 574
           VM+        +++  +L S+   S    +SRI
Sbjct: 720 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 196/385 (50%), Gaps = 2/385 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P     N L+N   + G  D     +E+M   G+  D++T+  +I   C  G +  A+
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 454

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-LYTYNALMDG 198
             F+ MID G+ P   +Y+ LI G CN   +V+A+ +   M   G+ P  +  + ++++ 
Sbjct: 455 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 514

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   V    +    ++H   +PN++TF  L+DG C VG ++ A      M   GV P+
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           I+ YN L+DG+CK G + +A++L  +M    ++    +YNI++ GL    +   A+ +  
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G+  ++ TY +++ G C+    ++A  +  ++    V+ +++TF+ +I    K G
Sbjct: 635 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 694

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
               A  L+  +    LVP ++ +  +I  L K+ + ++   L+  M ++  TP    ++
Sbjct: 695 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 754

Query: 439 SLIHGLFKNGRISNALNFFLEKTDK 463
            +I  L   G ++ A N +L K DK
Sbjct: 755 EIIRMLLNKGEVAKAGN-YLSKIDK 778



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 200/411 (48%), Gaps = 4/411 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+TLI A++ +G ++++L ++    K  V P I   + +++   + G+ D   E +  M
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV-IYTILIHGLCNENK 169
           +  G+  D   Y  LI   C + D++KA  L  +M+ KGI P  +  +T +I+ LC E +
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + E + +   +   G  PNL T+N+L+DGYC V ++  A+     M    ++P++ T+  
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG CK G +  A   F  M    V      YN ++ G  +A     A  +  EM +  
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 640

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++  + TY  ++ GLC     + A  LL+K++   +  +++T+N +I    K G  ++A 
Sbjct: 641 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 700

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + + ++  G+ P ++T+  +I    K  + + A  L++ M   S  PD  +   +I  L
Sbjct: 701 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 760

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
              G + +      ++ +  I P   T S LI+    NG+    +    EK
Sbjct: 761 LNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEK 811



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 5/252 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L+S+E     P +++  TL+  + + G I++AL ++R +    V     + N +L+GL +
Sbjct: 563 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 622

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             +     E + EM+  G+   + TY  ++   C      +A  L +++    ++  ++ 
Sbjct: 623 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 682

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           + I+I  +    +  EA+ +F ++   G+VP + TY  ++    K      A   +  M 
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  P+      ++  L   GE+  AGN+   + K G+ P     + LI      G   
Sbjct: 743 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 802

Query: 277 EAMSLCSEMEKF 288
           E + L  E  +F
Sbjct: 803 EYIKLLPEKYRF 814


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 255/549 (46%), Gaps = 11/549 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  +EA   L   R    +P++ A N +L  L KKGK D     +EEM
Sbjct: 203 AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM 262

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +  ++ TY ++I   C  G+V  A  + D M + G+ P V    I+I  LC   K+
Sbjct: 263 KRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKL 321

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+F  M      P+  T+ +L+DG  K   V+ A   Y  ML  +  PNVV +  L
Sbjct: 322 DEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSL 381

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +    K          +  M + G  P++ + N  +D   KAG   +  +L  E++    
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGF 441

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y+ILI  L   G       L   M  +G + +   YN++IDG+CK G + KA  
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 501

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   G  P VVT+ S++DG  K   +D A  L+ E     +  + V++++LIDG  
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K G + E   + +EM++  +TP+V+T + L+ GL K   I+ AL  F    D      C+
Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK----CT 617

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN + Y  +I  LC   +  KA   + +M+   L+P+  TYT M+ GL ++  +     L
Sbjct: 618 PNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSL 677

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
                  G +PD+     M+ G         A+   +  +E+R+        T  + L  
Sbjct: 678 FERFRASGGIPDSASYNAMIEGLSIANRALDAY---QLFEETRLKGCSIHTKTCVALLDA 734

Query: 591 LKPTVYKEQ 599
           L      EQ
Sbjct: 735 LHKAECLEQ 743



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 9/488 (1%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGL 94
           +F  +    +P  N   ++ +I    + G++E A  V    ++  + P ++  N +++ L
Sbjct: 258 IFEEMKRDAMP--NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRL 315

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K  K D     +E M       D  T+  LID    QG V  A  +++ M+D    P V
Sbjct: 316 CKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V+YT LI      ++  +   M++ M   G  P+L   N  MD   K  +  +    + E
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +      P+  ++ +L+  L K G  R     +  M   G   +   YN +IDG CK+G 
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +A  L  EM+     P V TY  ++ GL  + +L+ A  L ++    GI  N V Y+S
Sbjct: 496 VNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSS 555

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+ K G +++A  V  +M +KG+ PNV T++ L+DG  KA  I+ A+  +  M    
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK 615

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             P+ + +  LI+GL K     +    ++EM +  + P+  T +++I GL K+G ++ A 
Sbjct: 616 CTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQAS 675

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F  +  +  GG   P+   Y A+I+ L    + L A +LF + R         T   +
Sbjct: 676 SLF--ERFRASGGI--PDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVAL 731

Query: 515 LRGLLRAK 522
           L  L +A+
Sbjct: 732 LDALHKAE 739



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 37/558 (6%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
           L  + I  F P+ ++   L+ +  +   + EA   L + R  +  PA  A   L+  L +
Sbjct: 14  LGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSE 73

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+ D +   + +M   G   +V     LI     +G V  AL+L DEM     +  +V+
Sbjct: 74  VGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVL 133

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y + I       K+  A   F  M+  G+VP+  TY ++M   CK   ++ A+E + +M 
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            +   P    +  ++ G    G+   A +        G  P++  YNC++    K G   
Sbjct: 194 QNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD 253

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +  EM++ +  P++ TYNI+I  LC  G +E A  +   M + G+  NV T N +I
Sbjct: 254 KALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           D  CK   +++A S+   M  K   P+  TF SLIDG  K G +D A  +Y  M+    +
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+VVV+T+LI    K    ++  ++YKEM+ +  +P +  +++ +  +FK G        
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 457 FLEKTDK----------------TDGGYCSPNHVLYAA---------------IIQALCY 485
           F E   +                   G+    + LY A               +I   C 
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G++ KA +L  +M++    P   TY +++ GL +  R+ +  ML  +    GI  + VI
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 546 NQVMVRGYQENGDLKSAF 563
              ++ G+ + G +  A+
Sbjct: 553 YSSLIDGFGKVGRVDEAY 570



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 223/511 (43%), Gaps = 38/511 (7%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           +++   FD + +   EM + G      T   L+  C     +++A +L   M      P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
              YT LI  L    +     ++F  M+E G   N++    L+  + +   V+ AL    
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM  +    ++V + V +D   KVG++  A  FF  M   G+ P+   Y  ++   CKA 
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV--- 330
            L EA+ +  +ME+    P  + YN +I G    G+ + A  LL++   +G + +VV   
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240

Query: 331 -------------------------------TYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
                                          TYN +I   CK G++E A  V   M E G
Sbjct: 241 CILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + PNV T + +ID  CKA  +D A  ++  M  K   PD   F +LIDGL K G + +  
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAY 360

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           R+Y+ ML+A   P+V   +SLI   FK  R  +    + E         CSP+ +L    
Sbjct: 361 RIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG----CSPDLMLLNTY 416

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  +   G+  K   LF ++++    PD  +Y+ ++  L++A    +   L   M   G 
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           V D      ++ G+ ++G +  A++  E +K
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 3/321 (0%)

Query: 66  GHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G  E+   ++ +I+    LP  ++ + L++ L+K G     +E Y  M   G V D   Y
Sbjct: 424 GETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +ID  C  G V KA  L +EM   G  PTVV Y  ++ GL   +++ EA  +F   + 
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  N   Y++L+DG+ KV  V+ A     EM+   L PNV T+  L+DGL K  E+  
Sbjct: 544 NGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINE 603

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M      PN   Y  LI+G CK     +A     EM+K  + P+  TY  +I 
Sbjct: 604 ALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G +  A  L ++    G + +  +YN++I+G         A  +  +   KG   
Sbjct: 664 GLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI 723

Query: 363 NVVTFSSLIDGQCKAGNIDAA 383
           +  T  +L+D   KA  ++ A
Sbjct: 724 HTKTCVALLDALHKAECLEQA 744



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 9/309 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAI---QACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S LI +  + G   E   +Y  ++    +   +A N +++G  K GK +  ++  EEM 
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G    VVTYG ++D       + +A  LF+E    GIE   VIY+ LI G     ++ 
Sbjct: 508 TMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVD 567

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M + G+ PN+YT+N L+DG  K  ++N AL  +  M      PN +T+ +L+
Sbjct: 568 EAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILI 627

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLCKV +   A  F+  M K G+ PN   Y  +I G  K+GN+ +A SL    E+F  S
Sbjct: 628 NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSL---FERFRAS 684

Query: 292 ---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD  +YN +I+GL    +   A  L ++   +G   +  T  +L+D   K   +E+A
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744

Query: 349 LSVCSQMTE 357
             V + + E
Sbjct: 745 AIVGAVLRE 753



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 108/288 (37%), Gaps = 39/288 (13%)

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM      P  +T   L+       +L  A  LLQ M           Y +LI    + G
Sbjct: 16  EMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVG 75

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           + ++ L++ +QM E G E NV   ++LI    + G +DAA+ L  EM   +   D+V++ 
Sbjct: 76  ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYN 135

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             ID   K G +    + + EM                     NG +             
Sbjct: 136 VCIDCFGKVGKVDMAWKFFHEMK-------------------ANGLV------------- 163

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+ V Y +++  LC   ++ +A ++F  M  +   P    Y TM+ G   A +
Sbjct: 164 -------PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             +   LL      G +P  V    ++    + G    A R  E +K 
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR 264


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 268/599 (44%), Gaps = 91/599 (15%)

Query: 29  RKPHHVCYSVFNALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PA 83
           R   H   ++F+AL          + S F+ L+ A S  G   +A+  + +++     P 
Sbjct: 112 RLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPT 171

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
               N +L  L+  G        Y  MV  G   +  TY VL+D  C QG    AL +FD
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+D+GI P V IYT+L+  LCN  K+ EA  +  SM++ G +P+  TYNA + G CKV 
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291

Query: 204 DVNRALE-----------------------------------FYHEMLHHNLQPNVVTFG 228
            VN A +                                   +Y  ML  N+ P+VV + 
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++ G  + G +  A +F   M K G  P+ F YN ++   C  G+L  A +L SEM + 
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME-- 346
            +  D  T  I+I GLC  G ++ A  +  +M + G    V+TYN+LIDG+ +EG +E  
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471

Query: 347 ----------------------------------------------KALSVCSQMTEKGV 360
                                                         KA  +   + + GV
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+VVT+++LI+G CKA N+D A+ L+ E+ +K + PD + +  LIDGL +     + + 
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L++ +L++  +PS+   +S++  L +  ++S A+N +L+   K    Y  P      A  
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK---YNFPVESEVLANA 648

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
                DG +    +    +  +     +  YT  L GL + +R  D + +   + + GI
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 19/444 (4%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  ++      G ++ AL L++ M+  G  P    Y +L+ GLC +    +A  MF  M 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G++PN+  Y  L+   C    ++ A++    M      P+ VT+   + GLCKVG + 
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V +   G    +  Y+CLIDG  +A    E       M +  ISPDV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           +G    G++E A   L  M K+G + +   YN+++   C  GD+E+A ++ S+M +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            +  T + +I G CK G +D AM ++ EM      P V+ + ALIDG  ++G ++E   L
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 422 YKEMLEAKITPSVF--------------TVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           + +M E    PS+F              ++  L+H + ++G++  A        D     
Sbjct: 475 FHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG--- 530

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V Y  +I  LC    +  A +LF +++   + PD  TY T++ GLLRA R  D 
Sbjct: 531 -VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 528 MMLLADMIKMGIVPDAVINQVMVR 551
           MML  ++++ G  P   I   M+R
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMR 613



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 210/467 (44%), Gaps = 51/467 (10%)

Query: 141 LFDEMIDK---GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +FD + D    G+  +   +  L+    +  +  +A   F  M E    P  + YN ++ 
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILK 180

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
                  +  AL  Y+ M+     PN  T+ VLMDGLCK G    A   F  M   G+ P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA---- 313
           N+ +Y  L+   C AG + EA+ L   M+     PD  TYN  + GLC VG++  A    
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 314 -------------------EGLLQ-KMYKEG-----------ILANVVTYNSLIDGYCKE 342
                              +GL Q + + EG           I  +VV Y  +I G  + 
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +E ALS    M +KG  P+   +++++   C  G+++ A  L +EM+  +LV D    
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEK 460
           T +I GL K G + E ++++ EM E    P+V T ++LI G ++ GR+  A   F  +E 
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 461 TDK-------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            +        T G     +      ++  +C  GQ+LKA KL   +    + PD  TY T
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV----RGYQEN 556
           ++ GL +A+ +   + L  ++   GI PD +    ++    R ++EN
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 4/343 (1%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L  +   F  L+      G    A   F  M +F   P  FVYN ++     +G +  A+
Sbjct: 133 LPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLAL 192

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L + M     +P+  TYN+L+ GLC  G    A  +  +M   GI+ NV  Y  L+   
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G +++A+ +   M +KG  P+ VT+++ + G CK G ++ A      +        +
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             ++ LIDGL +     E    YK MLE  I+P V   + +I G  + GRI +AL+F   
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              K   G+  P+   Y  +++ LC  G + +A  L S+M  +NL  D+ T T M+ GL 
Sbjct: 373 MKKK---GFV-PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   + + M +  +M + G  P  +    ++ G+   G L+ A
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 4/304 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  L+  H  AG   +A+   S M++F+  P  F YN ++K L   G +  A  L  +M
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   N  TYN L+DG CK+G    AL +  +M ++G+ PNV  ++ L+   C AG I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L   M  K  +PD V + A + GL K G + E  +    + +      +   S L
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+  R      ++    ++      SP+ VLY  +I+     G+I  A      M+
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                PD   Y T+L+ L     +     L ++M++  +V D+    +M+ G  + G + 
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434

Query: 561 SAFR 564
            A +
Sbjct: 435 EAMQ 438



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 173/396 (43%), Gaps = 54/396 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I   +E G IE+AL    V +K   +P     N +L  L   G  +       EM
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   LV D  T  ++I   C +G V +A+ +FDEM + G +PTV+ Y  LI G   E ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 171 VEAESMFRSMRECGVVPNLY--------------TYNALMDGYCKVADVNRALEFYHEML 216
            EA  +F  M E G  P+L+              +   L+   C+   V +A +    ++
Sbjct: 469 EEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSII 527

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+VVT+  L++GLCK   L  A   F  +   G+ P+   Y  LIDG  +A    
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL----LQKMY----KEGILAN 328
           +AM L   + +   SP +  YN +++ LC + +L  A  L    L K Y    +  +LAN
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 329 V---VTYNSLIDG-------------------------YCKEGDMEKALSVCSQMTEKGV 360
               +   SL DG                          C+    + AL +   + E G+
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +      + LI+  C   N++AA+ +    + KS++
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 29/314 (9%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIEV-----------LPAIQACNA-----LLN 92
           +P+V  ++ LI  F   G +EEA  ++ K+E+           L A Q C++     L++
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            + + G+    ++    ++  G+V DVVTY  LI+  C   ++  A+ LF E+  KGI P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             + Y  LI GL   ++  +A  +F+++ + G  P+L  YN++M   C++  +++A+  +
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKV------GELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            + L     P    F V  + L         G L       + + +   + +   Y   +
Sbjct: 629 LDYL-----PKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWL 683

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C+     +A+ +   +++F I        +LI  LC    L  A  ++     + I+
Sbjct: 684 IGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743

Query: 327 ANVVTYNSLIDGYC 340
            +    N L+   C
Sbjct: 744 LSQPVGNRLLRWLC 757



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 55/300 (18%)

Query: 51  NPSVFSTLIIAFSEM----------------GHIEEALWVYRKI---EVLPAIQACNALL 91
           NPS+F  L +  +++                G + +A  + R I    V+P +   N L+
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL K    D     ++E+ L G+  D +TYG LID          A+ LF  ++  G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 152 PTVVIYTILIHGLC------------------------------NENKMVEAESMFRSMR 181
           P++ IY  ++  LC                              N +K +E  S+   +R
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 182 ECGVVPNLY------TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           E   +   Y       Y   + G C+V   + AL  +H +    +        +L++ LC
Sbjct: 663 ELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
               L AA +  ++     +  +  V N L+   C      +A +L   M       DV+
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A +  S    ++L+      GR ++A+  F     + D     P   +Y  I++AL   G
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRNADAVQAF----SRMDEFQSRPTAFVYNTILKALVDSG 186

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            IL A  L++ M +    P+  TY  ++ GL +     D + +  +M+  GI+P+  I  
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246

Query: 548 VMVRGYQENGDLKSAFR 564
           V++      G +  A +
Sbjct: 247 VLLSSLCNAGKIDEAVQ 263


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 216/377 (57%), Gaps = 1/377 (0%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLF 142
           +Q+   +++ L ++G+ +   E  +EMV  G+V  +V TY  L++   G+ D      + 
Sbjct: 216 VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL 275

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  + +  +V  Y+ILI    +   + EAE +F  MRE  +  ++Y Y++++    ++
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            ++ RA   + EM   ++ PN  T+G L+ G+CK G++ AA    + M   GV  N+ ++
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIF 395

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N  +DG+C+ G + EA+ L + MEK  I+ DVFTYNIL  GLC + + + A+ +L  M +
Sbjct: 396 NTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVE 455

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +G+  NVVT+   I+ YCKEG++ +A  +   M +KG  PN++T+++LID  CK   +  
Sbjct: 456 KGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQ 515

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  + +EM+ K L+PD+  +++LI G    G + E L+L+ EM    IT +V T +S+I 
Sbjct: 516 AHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMIS 575

Query: 443 GLFKNGRISNALNFFLE 459
           GL K GR   A   + E
Sbjct: 576 GLSKEGRADEAFKLYDE 592



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 246/491 (50%), Gaps = 42/491 (8%)

Query: 69  EEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG-LVADVVTYGV 124
           +E + VY  +E   ++   ++C  LL  L + G+ D    F+  MV        V +  +
Sbjct: 162 DETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTL 221

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +ID  C +G+V KA  L DEM+ KGI                                  
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGI---------------------------------- 247

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V PN++TYN L++ Y    D     E    M    +  +V T+ +L+      G++  A 
Sbjct: 248 VKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAE 307

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M +  +  +++VY+ +I    + GN+  A +L  EM + +I P+  TY  LI G+
Sbjct: 308 KIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGV 367

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  GQ+E AE LL +M  +G+  N+V +N+ +DGYC+ G M++AL + + M +KG+  +V
Sbjct: 368 CKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADV 427

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            T++ L +G CK    D A  +   MV K + P+VV FT  I+   K+GN+ E  RL+++
Sbjct: 428 FTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRD 487

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M +    P++ T ++LI    K  ++  A      K++  + G   P+   Y+++I   C
Sbjct: 488 MEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI---KSEMINKGLL-PDLYTYSSLIHGEC 543

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++ +A KLF++MR   +  +  TYT+M+ GL +  R  +   L  +M+K+G++PD  
Sbjct: 544 IVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDR 603

Query: 545 INQVMVRGYQE 555
           +   +V  + +
Sbjct: 604 VFTSLVGSFHK 614



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 239/484 (49%), Gaps = 32/484 (6%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +  I + P ++A   L++ L +  KF ++     + +L GLV D       I+C      
Sbjct: 84  HSNISLKPDLKAHLILISRLFEARKFATM-----KSILNGLVTDSD-----IEC-----P 128

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV-EAESMFRSMRECGVVPNLYTYN 193
           V   ++L DE     +E     +  ++  +C++N++  E   ++  + E G+V    +  
Sbjct: 129 VSSIVDLVDEFESHFVEK----FCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCF 184

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            L+    +  +V+  + F+H M+  N  +  V +  +++D LC+ GE+  A      M  
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244

Query: 253 FGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
            G+  PN+F YN L++ +    +      +   MEK ++   V TY+ILI+     G +E
Sbjct: 245 KGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIE 304

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            AE + ++M ++ I  +V  Y+S+I    + G+M++A ++  +M+++ + PN  T+ +LI
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CKAG ++AA  L  EM  K +  ++V+F   +DG  + G M E LRL   M +  I 
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGIN 424

Query: 432 PSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
             VFT + L +GL K  R   A   LN  +EK  K       PN V +   I+  C +G 
Sbjct: 425 ADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK-------PNVVTFTMFIEIYCKEGN 477

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A +LF DM      P+  TY T++    + +++     + ++MI  G++PD      
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537

Query: 549 MVRG 552
           ++ G
Sbjct: 538 LIHG 541



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 5/211 (2%)

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM-KETLRLYKE 424
           T  S+++G     +I+  +    ++V +     V  F  ++  +  D  +  ET+R+Y  
Sbjct: 111 TMKSILNGLVTDSDIECPVSSIVDLVDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDY 170

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           + E  +     +   L+  L + G +   + FF    +         +  L   +I  LC
Sbjct: 171 VEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTL---VIDVLC 227

Query: 485 YDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
             G++ KA +L  +M    + +P+  TY T+L   +  K    V  +L  M K  +V   
Sbjct: 228 RRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSV 287

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
               ++++ Y  +GD++ A +  E ++E  I
Sbjct: 288 ATYSILIQWYSSSGDIEEAEKIFEEMREKNI 318


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 243/514 (47%), Gaps = 39/514 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + + + ++NG   +G+ D  +  + EM+  G+  DVVTY  +ID  C      +A  +
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +MID G++P +  Y  LIHG  +  K  E   M   M   G  PN  TY +L++  CK
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A  F+  M+   ++P+V T+G+++ G    G L    +    M   G+ PN  +
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N     + K G + +AM + ++M +  +SPD  +Y  LI  LC +G+++ AE    +M 
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 322 KEGILANVVTYNSLIDG-----------------------------------YCKEGDME 346
            EG+  ++V ++SL+ G                                    CKEG + 
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +   +   +   GV P+V+++++LIDG C AG ID A  L   MV   L PD   +  L+
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G +      +++ML   ITP V T ++++HGLF+  R S A   +L   +    
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG-- 618

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
                +   Y  I+  LC    + +A K+F ++ S  L+ +  T+  M+  LL+  R  D
Sbjct: 619 --TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKED 676

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            M L A +   G+V + V  +++V    E G L+
Sbjct: 677 AMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 263/532 (49%), Gaps = 12/532 (2%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNAL 90
           Y++F  +    IP   P V  ++T+I    +    + A  V++++    V P I   N L
Sbjct: 223 YNLFLEMMDRGIP---PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCL 279

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G +  GK+  V    EEM   G   +  TYG L++  C  G   +A   FD MI KGI
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGI 339

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           +P+V  Y I++HG   +  + E   +   M   G+ PN + +N     Y K   +++A++
Sbjct: 340 KPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMD 399

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +++M    L P+ V++G L+D LCK+G +  A   F  M   GV P+I V++ L+ G C
Sbjct: 400 IFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLC 459

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
                 +   L  EM    I P++  +N ++  LC  G++   + L+  +   G+  +V+
Sbjct: 460 TVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVI 519

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +YN+LIDG+C  G +++A  +   M   G++P+  ++++L+ G CKAG ID+A   + +M
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKM 579

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +   + P VV +  ++ GL +     E   LY  M+ +     ++T + +++GL K+  +
Sbjct: 580 LSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCV 639

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A+  F     K        N + +  +I AL   G+   A  LF+ + ++ L  +  T
Sbjct: 640 DEAIKMFQNLCSKG----LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVT 695

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y  ++  L+    + +   L + M K G  P++ +   +VR     GD+  A
Sbjct: 696 YRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 242/519 (46%), Gaps = 31/519 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEAL----------WVYRKIEVLPAIQACNALLNGLIKKGKF 100
           N   +S LI  F  MGH+E             W    I +       N LLNGL    + 
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVI-------NQLLNGLCDGKRV 145

Query: 101 DSVWE-FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI---EPTVVI 156
               +   + M   G + D V+Y +L+   C +    +AL L   M D  +    P VV 
Sbjct: 146 GEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVS 205

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ +I+G   E ++ +  ++F  M + G+ P++ TY  ++DG CK    +RA   + +M+
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            + ++PN+ T+  L+ G   +G+ +        M+  G  PN   Y  L++  CK G   
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA      M    I P V TY I++ G    G L     LL  M   GI  N   +N   
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             Y K G ++KA+ + ++M ++G+ P+ V++ +LID  CK G +D A   + +M+ + + 
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD+VVF++L+ GL      ++   L+ EML   I P++   ++++  L K GR+      
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV------ 499

Query: 457 FLEKTDKTDGGYC---SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            +E     D   C    P+ + Y  +I   C  G I +ASKL   M S  L+PD+ +Y T
Sbjct: 500 -MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +L G  +A R+         M+  GI P  V    ++ G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 265/577 (45%), Gaps = 51/577 (8%)

Query: 31  PHHVCYSVF--------------NALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWV 74
           P+H  +++F              +  N +     +P   S   LI A  ++G +++A   
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435

Query: 75  YRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
           + ++    V P I   ++L+ GL    K++ V E + EM+  G+  ++V +  ++   C 
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 495

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           +G VM+   L D +   G+ P V+ Y  LI G C    + EA  +   M   G+ P+ ++
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YN L+ GYCK   ++ A   + +ML + + P VVT+  ++ GL +      A   +++M 
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G   +I+ YN +++G CK+  + EA+ +   +    +  ++ T+NI+I  L   G+ E
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L   +   G++ NVVTY  +++   +EG +E+  S+ S M + G  PN    ++L+
Sbjct: 676 DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD------------------- 412
                 G+I  A    +++  ++   +    + LI   S D                   
Sbjct: 736 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEA 795

Query: 413 ---------GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
                      + +   L++EML   +TP V T ++++HGLF+ GR S A   +L   + 
Sbjct: 796 NSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 855

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                   N   Y  I+  LC    + +A K+F  + S  L+ +  T+  M+  LL+  R
Sbjct: 856 R----TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGR 911

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             D M L A +   G+VPD V  +++     E G L+
Sbjct: 912 KEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLE 948



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 220/489 (44%), Gaps = 45/489 (9%)

Query: 121 TYGVLIDCCCGQGD----------------------VMKALN--------------LFDE 144
           TY +LI C C  G                       + + LN              L   
Sbjct: 96  TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQR 155

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV---PNLYTYNALMDGYCK 201
           M + G  P  V Y IL+ GLCNE +  EA  +   M +  V    PN+ +Y+ +++G+  
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V++    + EM+   + P+VVT+  ++DGLCK      A   F  M   GV PNI  
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YNCLI G+   G   E + +  EM      P+  TY  L+  LC  G+   A      M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +GI  +V TY  ++ GY  +G + +   + + M   G+ PN   F+       K G ID
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM ++ +M  + L PD V + ALID L K G + +    + +M+   +TP +   SSL+
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +GL    +       F E  +        PN V +  I+  LC +G++++  +L   +  
Sbjct: 456 YGLCTVDKWEKVEELFFEMLNVG----IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             +RPD  +Y T++ G   A  + +   LL  M+ +G+ PD+     ++ GY + G + S
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDS 571

Query: 562 AFRCSEFLK 570
           A+  S F K
Sbjct: 572 AY--SHFRK 578



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 237/510 (46%), Gaps = 26/510 (5%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P     N   +   K G  D   + + +M   GL  D V+YG LID  C  G V  A 
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
             F++MI++G+ P +V+++ L++GLC  +K  + E +F  M   G+ PN+  +N ++   
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V         +    ++P+V+++  L+DG C  G +  A      M   G+ P+ 
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN L+ G+CKAG +  A S   +M    I+P V TYN ++ GL    +   A+ L   
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G   ++ TYN +++G CK   +++A+ +   +  KG++ N++TF+ +I    K G 
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + AM L+  +    LV +VV +  +++ L ++G+++E   L+  M +    P+   +++
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG------------ 487
           L+  L   G IS A   +L K D+ +    +    +  +I  +  Y              
Sbjct: 734 LVRRLLHRGDISRA-GAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 792

Query: 488 -------------QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
                        +I  A  LF +M    L PD  TY T+L GL +  R  +   L   M
Sbjct: 793 NEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 852

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           I      +     +++ G  ++  +  AF+
Sbjct: 853 INSRTQMNIYTYNIILNGLCKSNCVDEAFK 882



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 238/515 (46%), Gaps = 14/515 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+T++    + G + E   +   IE   V P + + N L++G    G  D   +  
Sbjct: 482 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 541

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E MV  GL  D  +Y  L+   C  G +  A + F +M+  GI P VV Y  ++HGL   
Sbjct: 542 EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQT 601

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA+ ++ +M   G   ++YTYN +++G CK   V+ A++ +  +    LQ N++TF
Sbjct: 602 KRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITF 661

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +++  L K G    A + F  +   G+  N+  Y  +++   + G+L E  SL S MEK
Sbjct: 662 NIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEK 721

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +P+    N L++ L   G +  A   L K+ +        T + LI  +  +     
Sbjct: 722 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHH 781

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A S    + +K    N    S+LI    KA  ID A  L+ EM++K L PDVV +  ++ 
Sbjct: 782 AKS----LPKKYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL + G   E   LY  M+ ++   +++T + +++GL K+  +  A   F     K    
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG--- 891

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               N + +  +I AL   G+   A  LF+ + ++ L PD  TY  +   L+    + + 
Sbjct: 892 -LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             L   M K G   D+ +   +VR   + GD+  A
Sbjct: 951 DGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 211/457 (46%), Gaps = 36/457 (7%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN----ENKM 170
           ++AD    G L     G GD   AL LFDE++      +VV +  L+  +       +  
Sbjct: 18  VIADRARSGSL-----GLGD---ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTT 69

Query: 171 VEAE---SMF-RSMREC--GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            E+E   S+F R +R+C   V PN  TY+ L+  +C++  +      +  +L    + + 
Sbjct: 70  SESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDH 129

Query: 225 VTFGVLMDGLC---KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           +    L++GLC   +VGE  A       M + G  P+   YN L+ G C      EA+ L
Sbjct: 130 IVINQLLNGLCDGKRVGE--AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALEL 187

Query: 282 CSEMEKFEI---SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
              M   ++    P+V +Y+ +I G    GQ++    L  +M   GI  +VVTY ++IDG
Sbjct: 188 LHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDG 247

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            CK    ++A +V  QM + GV+PN+ T++ LI G    G     + +  EM      P+
Sbjct: 248 LCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPN 307

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS---NALN 455
              + +L++ L K+G  +E    +  M+   I PSV T   ++HG    G +S   + LN
Sbjct: 308 CCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             +           SPNH ++     A    G I KA  +F+ MR   L PD  +Y  ++
Sbjct: 368 LMVANG-------ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALI 420

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L +  R+ D  +    MI  G+ PD V+   +V G
Sbjct: 421 DALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 207/447 (46%), Gaps = 34/447 (7%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P  FS  TL+  + + G I+ A   +RK+    + P +   N +L+GL +  +F    E 
Sbjct: 551 PDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y  M+  G   D+ TY ++++  C    V +A+ +F  +  KG++  ++ + I+I  L  
Sbjct: 611 YLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLK 670

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +  +A  +F ++   G+V N+ TY  +++   +   +      +  M  +   PN   
Sbjct: 671 GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 730

Query: 227 FGVLMDGLCKVGELRAAG---------NFFVHMAKFGVFPNIFV--------------YN 263
              L+  L   G++  AG         NF V  +   +  +IF               Y 
Sbjct: 731 LNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR 790

Query: 264 CLIDGHC-----KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            L + +      KA  + +A SL  EM    ++PDV TYN ++ GL   G+   A+ L  
Sbjct: 791 ILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 850

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M       N+ TYN +++G CK   +++A  +   +  KG++ N++TF+ +I    K G
Sbjct: 851 SMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGG 910

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + AM L+  +    LVPDVV +  + + L ++G+++E   L+  M ++        ++
Sbjct: 911 RKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLN 970

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTD 465
           +L+  L + G IS A   +L K D+ +
Sbjct: 971 ALVRRLLQRGDISRA-GAYLSKLDEKN 996



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 31/354 (8%)

Query: 49   KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC---NALLNGLIKKGKFDSVWE 105
            + N   F+ +I A  + G  E+A+ ++  I     +Q       ++  LI++G  +    
Sbjct: 655  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714

Query: 106  FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI---- 161
             +  M   G   +      L+     +GD+ +A     ++ ++         ++LI    
Sbjct: 715  LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 774

Query: 162  --------------HGLCNE----------NKMVEAESMFRSMRECGVVPNLYTYNALMD 197
                          + + NE           ++ +A S+FR M   G+ P++ TYN ++ 
Sbjct: 775  SDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            G  +    + A E Y  M++   Q N+ T+ ++++GLCK   +  A   F  +   G+  
Sbjct: 835  GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            NI  +N +I    K G   +AM L + +    + PDV TY ++ + L   G LE  +GL 
Sbjct: 895  NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF 954

Query: 318  QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
              M K G   +    N+L+    + GD+ +A +  S++ EK       T S LI
Sbjct: 955  LTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 99/204 (48%)

Query: 138  ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            A +LF EM+ KG+ P VV Y  ++HGL    +  EA+ ++ SM       N+YTYN +++
Sbjct: 810  AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILN 869

Query: 198  GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            G CK   V+ A + +  +    LQ N++TF +++  L K G    A + F  +   G+ P
Sbjct: 870  GLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVP 929

Query: 258  NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            ++  Y  + +   + G+L E   L   MEK     D    N L++ L   G +  A   L
Sbjct: 930  DVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYL 989

Query: 318  QKMYKEGILANVVTYNSLIDGYCK 341
             K+ ++       T + LI  + +
Sbjct: 990  SKLDEKNFSLEASTTSELISLFSR 1013



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 123/300 (41%), Gaps = 18/300 (6%)

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG-------DMEKALSVCSQM 355
           G  G+G    A  L  ++      A+VV +N L+    +         + E  +S+ ++M
Sbjct: 26  GSLGLGD---ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRM 82

Query: 356 TEK---GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                  V PN  T+S LI   C+ G+++     +  ++      D +V   L++GL   
Sbjct: 83  VRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDG 142

Query: 413 GNMKETLR-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             + E +  L + M E    P   + + L+ GL    R   AL       D      C P
Sbjct: 143 KRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWS-CPP 201

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y+ +I     +GQ+ K   LF +M    + PD  TYTT++ GL +A+       + 
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             MI  G+ P+      ++ GY   G  K   R    L+E   G  +    T  S L +L
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR---MLEEMSAGGPKPNCCTYGSLLNYL 318


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 277/552 (50%), Gaps = 45/552 (8%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           P VFS   LI  FS+ G +++A  ++ K+E   ++P +   ++L+NGL K  + D     
Sbjct: 151 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERV 210

Query: 107 YEEMVLCGLVADVVTYGVLI-----------------------------DC------CCG 131
             +MV  G+  + +TY  LI                             +C       C 
Sbjct: 211 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G + +A ++FD M+ KG +P V+ Y  L+HG      +   +++F  M   GVVP+ + 
Sbjct: 271 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 330

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N L++ Y ++  ++++L  + +M    + P+++TF  ++   C++G L  A   F HM 
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT-YNILIKGLCGVGQL 310
             GV P+  VY+CLI G C   +L +A  L S+M    I P     +  +I  LC  G++
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
              + ++  +   G   N++T+NSL+DGYC  G+M++A+ +   M   GVEP++ T+++L
Sbjct: 451 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 510

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +DG CK G ID A+ L+ +M+ K +    V +  ++ GL +         ++ EM+E+ +
Sbjct: 511 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 570

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
             S+ T ++++ GL +N   ++  N  LEK    +  +   + + +  +I+A+   G+  
Sbjct: 571 AVSIHTYATVLGGLCRNN-CTDEANMLLEKLFSMNVKF---DILTFNIVIRAMFKVGRRQ 626

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF+ + +  L P   TY  M+  L++ +   D   L + M K    PD+ I   ++
Sbjct: 627 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686

Query: 551 RGYQENGDLKSA 562
           R     G++  A
Sbjct: 687 RMLLNKGEVAKA 698



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 260/573 (45%), Gaps = 81/573 (14%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           E  P I   N L+N   +  + D     +  ++  GL  DV +Y  LID    +G+V KA
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 172

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            +LF +M ++GI P VV Y+ LI+GLC   +M +AE + R M   GV PN  TYN L+ G
Sbjct: 173 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 232

Query: 199 Y-----------------------------------CKVADVNRALEFYHEMLHHNLQPN 223
           Y                                   CK   +  A + +  M+    +P+
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+++G L+ G    G +    N F  M   GV P+  V+N LI+ + + G + +++ +  
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M K  ++PD+ T++ +I   C +G+L+ A      M   G+  +   Y+ LI G C   
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412

Query: 344 DMEKALSVCSQMTEKGV------------------------------------EPNVVTF 367
           D+ KA  + S M  KG+                                     PN++TF
Sbjct: 413 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 472

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +SL+DG C  GN+  A+GL   M    + PD+  +  L+DG  K G + + L L+++ML 
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
            ++T +  + + ++HGLF+  R   A   F E     + G     H  YA ++  LC + 
Sbjct: 533 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHE---MIESGMAVSIHT-YATVLGGLCRNN 588

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
              +A+ L   + S N++ D  T+  ++R + +  R  +   L A +   G+VP  +  +
Sbjct: 589 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 648

Query: 548 VMV------RGYQENGDLKSAFRCSEFLKESRI 574
           VM+        +++  +L S+   S    +SRI
Sbjct: 649 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 196/385 (50%), Gaps = 2/385 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P     N L+N   + G  D     +E+M   G+  D++T+  +I   C  G +  A+
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 383

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-LYTYNALMDG 198
             F+ MID G+ P   +Y+ LI G CN   +V+A+ +   M   G+ P  +  + ++++ 
Sbjct: 384 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 443

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   V    +    ++H   +PN++TF  L+DG C VG ++ A      M   GV P+
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           I+ YN L+DG+CK G + +A++L  +M    ++    +YNI++ GL    +   A+ +  
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 563

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G+  ++ TY +++ G C+    ++A  +  ++    V+ +++TF+ +I    K G
Sbjct: 564 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 623

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
               A  L+  +    LVP ++ +  +I  L K+ + ++   L+  M ++  TP    ++
Sbjct: 624 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 683

Query: 439 SLIHGLFKNGRISNALNFFLEKTDK 463
            +I  L   G ++ A N +L K DK
Sbjct: 684 EIIRMLLNKGEVAKAGN-YLSKIDK 707



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 200/411 (48%), Gaps = 4/411 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+TLI A++ +G ++++L ++    K  V P I   + +++   + G+ D   E +  M
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV-IYTILIHGLCNENK 169
           +  G+  D   Y  LI   C + D++KA  L  +M+ KGI P  +  +T +I+ LC E +
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + E + +   +   G  PNL T+N+L+DGYC V ++  A+     M    ++P++ T+  
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG CK G +  A   F  M    V      YN ++ G  +A     A  +  EM +  
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 569

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++  + TY  ++ GLC     + A  LL+K++   +  +++T+N +I    K G  ++A 
Sbjct: 570 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 629

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + + ++  G+ P ++T+  +I    K  + + A  L++ M   S  PD  +   +I  L
Sbjct: 630 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 689

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
              G + +      ++ +  I P   T S LI+    NG+    +    EK
Sbjct: 690 LNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEK 740



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 5/252 (1%)

Query: 42  LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L+S+E     P +++  TL+  + + G I++AL ++R +    V     + N +L+GL +
Sbjct: 492 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 551

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             +     E + EM+  G+   + TY  ++   C      +A  L +++    ++  ++ 
Sbjct: 552 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 611

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           + I+I  +    +  EA+ +F ++   G+VP + TY  ++    K      A   +  M 
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
             +  P+      ++  L   GE+  AGN+   + K G+ P     + LI      G   
Sbjct: 672 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 731

Query: 277 EAMSLCSEMEKF 288
           E + L  E  +F
Sbjct: 732 EYIKLLPEKYRF 743


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/414 (34%), Positives = 221/414 (53%), Gaps = 10/414 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
              S +++LI AF + G+ ++AL VYR   +  + P     N L+N   K  + DSVW+ 
Sbjct: 87  LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +EEM       +V+TY +LID  C  G V KAL +F +M  +G  P +  YT +I GL  
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              + +A  +F  M   G+V     YN+L+ G  +    + A + + EML   LQP+ VT
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  L+ GL   G    A   F      G   ++ +YN LID  CK+  L EA  +  E+E
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  + PDV+T+N L+ GLC  G++  A  LL  M + G   +V  YN+LIDG  K G +E
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M   G EP+VVT+++LID  CK G I+ A+ L+ E+  K    + V +  ++
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTIL 445

Query: 407 DGLSKDGNMKETLRLY----KEMLEAKITPSVFTVSSLIHGLFKNG--RISNAL 454
           +GL   G + E  +L+    +E ++  I P   T ++L++G  + G   ++N+L
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 204/413 (49%), Gaps = 11/413 (2%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           C L A    Y  LID     G   KAL ++  M   G+ P    + +L++      ++  
Sbjct: 85  CALTASA--YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDS 142

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              +F  M+     PN+ TY+ L+D  CK   V +AL+ + +M     +PN+ T+  ++D
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GL K G +  A   F  M   G+     VYN LI G  ++G    A  L  EM    + P
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP 262

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  T+  L+ GL   G+   A  + Q+    G   +V  YN LID  CK   +++A  + 
Sbjct: 263 DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIF 322

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            ++ E G+ P+V TF++L+DG CK+G I  A  L  +M      PDV V+  LIDGL K 
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G ++E  +L  EM      P V T ++LI    K GRI +AL  F E + K   G+   N
Sbjct: 383 GRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK---GFA--N 437

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDN----LRPDNCTYTTMLRGLLRA 521
            V Y  I+  LC  G++ +A KLF+ M+ +     + PD  TYTT+L G  +A
Sbjct: 438 TVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQA 490



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 189/381 (49%), Gaps = 7/381 (1%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K VEA       R C +  +   YN+L+D + K     +AL  Y  M    L+P+  TF 
Sbjct: 72  KSVEALKRMEGHR-CALTAS--AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           VLM+   K   + +    F  M      PN+  Y+ LID  CK G + +A+ +  +M+  
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P++FTY  +I GL   G ++ A  L ++M  EG++A  V YNSLI G  + G  + A
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M  KG++P+ VTF+SL+ G   AG    A  ++ E        DV ++  LID 
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K   + E   ++ E+ E  + P V+T ++L+ GL K+GRI +A  F L    K  G  
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA--FILLGDMKRAG-- 364

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           C+P+  +Y  +I  L   G++ +A +L  +M+S    PD  TY T++    +  R+ D +
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424

Query: 529 MLLADMIKMGIVPDAVINQVM 549
            L  ++   G       N ++
Sbjct: 425 RLFEEISAKGFANTVTYNTIL 445



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 179/373 (47%), Gaps = 4/373 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  GY     + +++E    M  H        +  L+D   K G  + A   +  M + G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P+ + +N L++   KA  +     L  EM+    SP+V TY+ILI  +C  G +E A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +   M   G   N+ TY S+IDG  K G ++KA  +  +MT +G+    V ++SLI G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            ++G  DAA  L+ EM+ K L PD V FT+L+ GL   G   E  R+++E  +      V
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              + LI  L K+ R+  A   F E  +  DG    P+   + A++  LC  G+I  A  
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEE--DG--LVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  DM+     PD   Y T++ GL ++ R+ +   LL +M  +G  PD V    ++    
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415

Query: 555 ENGDLKSAFRCSE 567
           + G ++ A R  E
Sbjct: 416 KGGRIEDALRLFE 428


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 254/555 (45%), Gaps = 45/555 (8%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKI--- 78
           +LLK      V   V N L +++     P+    S ++ A+ + G +  AL +Y      
Sbjct: 104 SLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDI 163

Query: 79  -EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
              LP + ACNALLN LI++ K +   + YEEM             V  D C     V  
Sbjct: 164 HNYLPDVIACNALLNALIQQKKVEIARKVYEEM-------------VKRDGCWDNYSV-- 208

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
                                I++ GLC E K+ E   +       G +PN+  YN L+D
Sbjct: 209 --------------------CIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVD 248

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GY K  DV RA   + E+      P   T+G++++GLCK    +A     V M + GV  
Sbjct: 249 GYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDV 308

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ VYN ++D   K G   E       + +    PD+ TYN LI G C  G++  AE LL
Sbjct: 309 NVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +   K G+  N ++Y  LI  YCK+G   +A  +   MTEKG   ++V + +L+ G   A
Sbjct: 369 EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAA 428

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A+ +  +MV + ++PD  V+  L++GL K G +     L  EML   ++   F  
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++L+ G  ++G++  A   F    + T      P  V Y A+I+  C  G +  A     
Sbjct: 489 ATLVDGFIRHGKLDEAKKLF----ELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M+  +  PD  TY+T++ G ++   + + + L   M+K    P+ V    ++ G+   G
Sbjct: 545 RMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 558 DLKSAFRCSEFLKES 572
           D   A +  E ++ S
Sbjct: 605 DSSRAEKTFEEMRSS 619



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 245/519 (47%), Gaps = 21/519 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+  + + G +E A  +++++++   LP  +    ++NGL KK  F +V    
Sbjct: 239 NIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLL 298

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+  +V  Y  ++D     G  ++       + + G EP +  Y  LI G C +
Sbjct: 299 VEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRD 358

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EAE +     + G+ PN  +Y  L+  YCK     RA + +  M       ++V +
Sbjct: 359 GKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAY 418

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+ GL   GE+  A      M + GV P+  VYN L++G CK G L  A  L  EM  
Sbjct: 419 GALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLH 478

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +S D F    L+ G    G+L+ A+ L +    +G+   VV YN++I GYCK G M  
Sbjct: 479 QNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMND 538

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+   +M +    P+  T+S++IDG  K  ++  A+ L+ +MV +   P+VV +T+LI+
Sbjct: 539 ALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLIN 598

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  + G+     + ++EM  + + P+V T + LI    K G+IS A +FF    +     
Sbjct: 599 GFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFF----ELMLLN 654

Query: 468 YCSPNHVLYAAIIQAL-----------CYDGQILKAS---KLFSDMRSDNLRPDNCTYTT 513
            C PN V +  +I  L             +   +KAS     F  M SD        Y +
Sbjct: 655 RCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNS 714

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +L  L   K +   + L   M   GI PD V    +V G
Sbjct: 715 VLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYG 753



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 207/421 (49%), Gaps = 18/421 (4%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++G  + GK     E  E  +  GL  + ++Y  LI   C QG  ++A +L
Sbjct: 343 PDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDL 402

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M +KG    +V Y  L+HGL    ++  A ++   M E GV+P+   YN LM+G CK
Sbjct: 403 FIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCK 462

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ A     EMLH NL  +      L+DG  + G+L  A   F      G+ P +  
Sbjct: 463 KGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVG 522

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +I G+CK G + +A++    M+  + SPD FTY+ +I G      L  A  L  +M 
Sbjct: 523 YNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMV 582

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           K+    NVVTY SLI+G+C+ GD  +A     +M   G++PNVVT++ LI   CK G I 
Sbjct: 583 KQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKIS 642

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKD------GNMKETLRL--------YKEMLE 427
            A   +  M++   +P+ V F  LI+GL+ +          E+L +        ++ M+ 
Sbjct: 643 KACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMIS 702

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
                 V   +S++  L  +  ++ AL       DK  G    P+ V +AA++  LC +G
Sbjct: 703 DGWEQRVAAYNSVLICLCHHKMVNAALQL----RDKMTGKGIFPDPVSFAALVYGLCLEG 758

Query: 488 Q 488
           +
Sbjct: 759 R 759



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 21/323 (6%)

Query: 54  VFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           V +TL+  F   G ++EA     L + + ++  P +   NA++ G  K G  +      +
Sbjct: 487 VSATLVDGFIRHGKLDEAKKLFELTIAKGMD--PGVVGYNAMIKGYCKFGMMNDALTCVQ 544

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M       D  TY  +ID    Q D+  AL LF +M+ +  +P VV YT LI+G C   
Sbjct: 545 RMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
               AE  F  MR  G+ PN+ TY  L+  +CK   +++A  F+  ML +   PN VTF 
Sbjct: 605 DSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFN 664

Query: 229 VLMDGLC------------KVGELRAA--GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
            L++GL             +  E++A+   +FF  M   G    +  YN ++   C    
Sbjct: 665 YLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKM 724

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+ L  +M    I PD  ++  L+ GLC  G+ +  +  +     E  L   V Y+ 
Sbjct: 725 VNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQ 784

Query: 335 LIDGYCKEGDMEKALSVCSQMTE 357
            ++ +  +G   +A  V   + E
Sbjct: 785 KLNPFLPKGLTSEASKVFHTLLE 807



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 17/144 (11%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK--------- 96
           K N   ++ LI  F + G I +A   +  +     +P     N L+NGL           
Sbjct: 622 KPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNK 681

Query: 97  -----KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
                + K   + +F+  M+  G    V  Y  ++ C C    V  AL L D+M  KGI 
Sbjct: 682 ANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIF 741

Query: 152 PTVVIYTILIHGLCNENKMVEAES 175
           P  V +  L++GLC E +  E ++
Sbjct: 742 PDPVSFAALVYGLCLEGRSKEWKN 765


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 268/599 (44%), Gaps = 91/599 (15%)

Query: 29  RKPHHVCYSVFNALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PA 83
           R   H   ++F+AL          + S F+ L+ A S  G   +A+  + +++     P 
Sbjct: 112 RLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPT 171

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
               N +L  L+  G        Y  MV  G   +  TY VL+D  C QG    AL +FD
Sbjct: 172 AFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFD 231

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+D+GI P V IYT+L+  LCN  K+ EA  +  SM++ G +P+  TYNA + G CKV 
Sbjct: 232 EMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVG 291

Query: 204 DVNRALE-----------------------------------FYHEMLHHNLQPNVVTFG 228
            VN A +                                   +Y  ML  N+ P+VV + 
Sbjct: 292 RVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYT 351

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++ G  + G +  A +F   M K G  P+ F YN ++   C  G+L  A +L SEM + 
Sbjct: 352 IMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME-- 346
            +  D  T  I+I GLC  G ++ A  +  +M + G    V+TYN+LIDG+ +EG +E  
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471

Query: 347 ----------------------------------------------KALSVCSQMTEKGV 360
                                                         KA  +   + + GV
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+VVT+++LI+G CKA N+D A+ L+ E+ +K + PD + +  LIDGL +     + + 
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L++ +L++  +PS+   +S++  L +  ++S A+N +L+   K    Y  P      A  
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK---YNFPVESEVLANA 648

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
                DG +    +    +  +     +  YT  L GL + +R  D + +   + + GI
Sbjct: 649 HKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 19/444 (4%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  ++      G ++ AL L++ M+  G  P    Y +L+ GLC +    +A  MF  M 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G++PN+  Y  L+   C    ++ A++    M      P+ VT+   + GLCKVG + 
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    V +   G    +  Y+CLIDG  +A    E       M +  ISPDV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           +G    G++E A   L  M K+G + +   YN+++   C  GD+E+A ++ S+M +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            +  T + +I G CK G +D AM ++ EM      P V+ + ALIDG  ++G ++E   L
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 422 YKEMLEAKITPSVF--------------TVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           + +M E    PS+F              ++  L+H + ++G++  A        D     
Sbjct: 475 FHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG--- 530

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V Y  +I  LC    +  A +LF +++   + PD  TY T++ GLLRA R  D 
Sbjct: 531 -VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 528 MMLLADMIKMGIVPDAVINQVMVR 551
           MML  ++++ G  P   I   M+R
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMR 613



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 210/467 (44%), Gaps = 51/467 (10%)

Query: 141 LFDEMIDK---GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +FD + D    G+  +   +  L+    +  +  +A   F  M E    P  + YN ++ 
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILK 180

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
                  +  AL  Y+ M+     PN  T+ VLMDGLCK G    A   F  M   G+ P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA---- 313
           N+ +Y  L+   C AG + EA+ L   M+     PD  TYN  + GLC VG++  A    
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 314 -------------------EGLLQ-KMYKEG-----------ILANVVTYNSLIDGYCKE 342
                              +GL Q + + EG           I  +VV Y  +I G  + 
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G +E ALS    M +KG  P+   +++++   C  G+++ A  L +EM+  +LV D    
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEK 460
           T +I GL K G + E ++++ EM E    P+V T ++LI G ++ GR+  A   F  +E 
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480

Query: 461 TDK-------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            +        T G     +      ++  +C  GQ+LKA KL   +    + PD  TY T
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV----RGYQEN 556
           ++ GL +A+ +   + L  ++   GI PD +    ++    R ++EN
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 4/343 (1%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L  +   F  L+      G    A   F  M +F   P  FVYN ++     +G +  A+
Sbjct: 133 LPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLAL 192

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           +L + M     +P+  TYN+L+ GLC  G    A  +  +M   GI+ NV  Y  L+   
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G +++A+ +   M +KG  P+ VT+++ + G CK G ++ A      +        +
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             ++ LIDGL +     E    YK MLE  I+P V   + +I G  + GRI +AL+F   
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              K   G+  P+   Y  +++ LC  G + +A  L S+M  +NL  D+ T T M+ GL 
Sbjct: 373 MKKK---GFV-PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   + + M +  +M + G  P  +    ++ G+   G L+ A
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 4/304 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  L+  H  AG   +A+   S M++F+  P  F YN ++K L   G +  A  L  +M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   N  TYN L+DG CK+G    AL +  +M ++G+ PNV  ++ L+   C AG I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L   M  K  +PD V + A + GL K G + E  +    + +      +   S L
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GLF+  R      ++    ++      SP+ VLY  +I+     G+I  A      M+
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                PD   Y T+L+ L     +     L ++M++  +V D+    +M+ G  + G + 
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434

Query: 561 SAFR 564
            A +
Sbjct: 435 EAMQ 438



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 173/396 (43%), Gaps = 54/396 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALW---VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I   +E G IE+AL    V +K   +P     N +L  L   G  +       EM
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   LV D  T  ++I   C +G V +A+ +FDEM + G +PTV+ Y  LI G   E ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 171 VEAESMFRSMRECGVVPNLY--------------TYNALMDGYCKVADVNRALEFYHEML 216
            EA  +F  M E G  P+L+              +   L+   C+   V +A +    ++
Sbjct: 469 EEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSII 527

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+VVT+  L++GLCK   L  A   F  +   G+ P+   Y  LIDG  +A    
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL----LQKMY----KEGILAN 328
           +AM L   + +   SP +  YN +++ LC + +L  A  L    L K Y    +  +LAN
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 329 V---VTYNSLIDG-------------------------YCKEGDMEKALSVCSQMTEKGV 360
               +   SL DG                          C+    + AL +   + E G+
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +      + LI+  C   N++AA+ +    + KS++
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 29/314 (9%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIEV-----------LPAIQACNA-----LLN 92
           +P+V  ++ LI  F   G +EEA  ++ K+E+           L A Q C++     L++
Sbjct: 449 DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVH 508

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            + + G+    ++    ++  G+V DVVTY  LI+  C   ++  A+ LF E+  KGI P
Sbjct: 509 DMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             + Y  LI GL   ++  +A  +F+++ + G  P+L  YN++M   C++  +++A+  +
Sbjct: 569 DEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKV------GELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            + L     P    F V  + L         G L       + + +   + +   Y   +
Sbjct: 629 LDYL-----PKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWL 683

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C+     +A+ +   +++F I        +LI  LC    L  A  ++     + I+
Sbjct: 684 IGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743

Query: 327 ANVVTYNSLIDGYC 340
            +    N L+   C
Sbjct: 744 LSQPVGNRLLRWLC 757



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 55/300 (18%)

Query: 51  NPSVFSTLIIAFSEM----------------GHIEEALWVYRKI---EVLPAIQACNALL 91
           NPS+F  L +  +++                G + +A  + R I    V+P +   N L+
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NGL K    D     ++E+ L G+  D +TYG LID          A+ LF  ++  G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 152 PTVVIYTILIHGLC------------------------------NENKMVEAESMFRSMR 181
           P++ IY  ++  LC                              N +K +E  S+   +R
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 182 ECGVVPNLY------TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           E   +   Y       Y   + G C+V   + AL  +H +    +        +L++ LC
Sbjct: 663 ELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
               L AA +  ++     +  +  V N L+   C      +A +L   M       DV+
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A +  S    ++L+      GR ++A+  F     + D     P   +Y  I++AL   G
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAF----SRMDEFQSRPTAFVYNTILKALVDSG 186

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            IL A  L++ M +    P+  TY  ++ GL +     D + +  +M+  GI+P+  I  
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246

Query: 548 VMVRGYQENGDLKSAFR 564
           V++      G +  A +
Sbjct: 247 VLLSSLCNAGKIDEAVQ 263


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 269/523 (51%), Gaps = 14/523 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++  I A+ E  +++ A  +  ++E   V  +    N L+ GL K  +     E    M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ AD VTY  L+   C   ++  AL +  +MI  G  P+    + +I  L  +  +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   + + G+VPN++ YNAL+D  CK    + A   + EM    L+PN VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A   F  M   G+   ++ YN LI+G+CK G+L  A  L S M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P   +Y+ LI GLC  G L  A  L ++M + GI  N  T+ +LI+G+CK+  M++A  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +  V PN VTF+ +I+G C  GNI  A  LY +MV   L PD   + +LI GL 
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTDKTDGG 467
               + +      ++  +    + F++++L++GLF+ GR +   + + E   +  K D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD-- 617

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             S   ++YAA+ Q   +D +  K+  LF +M+   ++PD+  YT M+  L + + M+  
Sbjct: 618 LVSFTIIVYAALKQ---HDKE--KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRCSEFL 569
           +     M+  G  P+ V + V++    ++G L SA   C E L
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 232/465 (49%), Gaps = 4/465 (0%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
             + +L  L+K  +F    + +++M+  G+  D   Y   I   C   ++  A  L   M
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
             +G++ + V Y +L++GLC   ++ EA  +   M   GV  +  TY  L+ G+C++ ++
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             AL   H+M+     P+      ++D L K   +  A +    +   G+ PN+F YN L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ID  CK     +A  L  EM    + P+  TY ILI  LC  G +E A  L  KM  +GI
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
              V  YNSLI+GYCK+G +++A  + S M ++G+ P   ++S LI G C+ G++ +AM 
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L+ EM  + +  +   FTALI+G  KD  M E  RL+ +M+++ + P+  T + +I G  
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             G I  A   +    D+       P++  Y ++I  LC    + KA++  +D+ +    
Sbjct: 525 LVGNIRKAFQLY----DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            +N + T +L GL R  R  +   L  +M   G+  D V   ++V
Sbjct: 581 LNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 251/505 (49%), Gaps = 8/505 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  + G IE+AL ++ K+    +   +   N+L+NG  K+G  D      
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLL 431

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  GL     +Y  LI   C  GD+  A+ L  EM ++GI      +T LI+G C +
Sbjct: 432 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKD 491

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM EA  +F  M +  V+PN  T+N +++GYC V ++ +A + Y +M+   L+P+  T+
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC    +  A  F   +       N F    L+ G  + G   E   L  EM  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAV 611

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ ++ I++         E +  L ++M ++G+  + + Y  +ID   KE +M +
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+   QM   G  PN VT + LI+  CK+G + +A  L  EM+  +++P+   +   +D
Sbjct: 672 ALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             + +G+M++   L+  ML+  +  S+ + + LI GL K G+I  A++   +    T+ G
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRK---ITESG 787

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + Y+ II  LC  G I KA +L+++M    L+PD   Y   +R           
Sbjct: 788 F-SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
           + +  +MI+ G+ P+    + ++ G
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 244/484 (50%), Gaps = 5/484 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P + A NAL++ L K  +FD     ++EM   GL  + VTY +LI   C +G +  AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LFD+M DKGI+ TV  Y  LI+G C +  +  A  +   M + G+ P   +Y+ L+ G 
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  D++ A+E + EM    +  N  TF  L++G CK  ++  A   F  M    V PN 
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N +I+G+C  GN+ +A  L  +M +  + PD +TY  LI GLC    +  A   +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +     + N  +  +L+ G  +EG   +   +  +M  +GV+ ++V+F+ ++    K  +
Sbjct: 574 LENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + +  L+ EM  + + PD + +T +ID LSK+ NM + L  + +M+    +P+  T + 
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTV 693

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+ L K+G + +A     E       G   PN   Y   +     +G + KA  L S M
Sbjct: 694 LINNLCKSGYLGSAELLCKEML----AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              +L     ++  +++GL +A ++ + + L+  + + G  PD +    ++    + GD+
Sbjct: 750 LQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 560 KSAF 563
             AF
Sbjct: 809 NKAF 812



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 203/428 (47%), Gaps = 39/428 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S LI      G +  A+ ++R++    +        AL+NG  K  K D     +++M+
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC------ 165
              ++ + VT+ V+I+  C  G++ KA  L+D+M++ G++P    Y  LI GLC      
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 166 -----------------------------NENKMVEAESMFRSMRECGVVPNLYTYNALM 196
                                         E +  E   ++  M   GV  +L ++  ++
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
               K  D  ++   + EM    ++P+ + +  ++D L K   +  A N +  M   G  
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYS 685

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   +  LI+  CK+G L  A  LC EM    + P+ FTYN  +      G +E A+ L
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M  +G LA++V++N LI G CK G +++A+ +  ++TE G  P+ +++S++I   CK
Sbjct: 746 HSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCK 804

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+I+ A  L+ EM+ K L PDVV +   I   +  G   + L +Y  M+ + + P+  T
Sbjct: 805 MGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDT 864

Query: 437 VSSLIHGL 444
             +L+ G+
Sbjct: 865 YRALLSGI 872



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 39/399 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           +N   F+ LI  F +   ++EA  ++ K+    V+P     N ++ G    G     ++ 
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA---------------------------- 138
           Y++MV  GL  D  TY  LI   C    V KA                            
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFR 595

Query: 139 -------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                   +L+DEM  +G++  +V +TI+++    ++   ++  +FR M+E GV P+   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  ++D   K  ++ +AL  + +M+     PN VT  VL++ LCK G L +A      M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              V PN F YNC +D     G++ +A  L S M +  ++  + ++NILIKGLC  G+++
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQ 774

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L++K+ + G   + ++Y+++I   CK GD+ KA  + ++M  KG++P+VV ++  I
Sbjct: 775 EAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                 G  D A+G+YT M+   + P+   + AL+ G+S
Sbjct: 835 RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 192/415 (46%), Gaps = 39/415 (9%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +LFD+M+  G+     +YT  I   C    +  A  +   M   GV  +   YN LM 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CK   V  A+E  + M++  +  + VT+  L+ G C++ EL  A      M + G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    + +ID                E+ K E+  + F+        C +G L       
Sbjct: 302 SEANCSFMID----------------ELRKKELVEEAFSLA------CKLGDL------- 332

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
                 G++ NV  YN+LID  CK    + A  +  +M  +G+EPN VT++ LI   CK 
Sbjct: 333 ------GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I+ A+ L+ +M  K +   V  + +LI+G  K G++     L   M++  +TP+  + 
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S LI GL +NG +S+A+    E  ++      + N+  + A+I   C D ++ +A++LF 
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERG----IAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            M   N+ P+  T+  M+ G      +     L   M++MG+ PD    + ++ G
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 194/408 (47%), Gaps = 7/408 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+  N YT + ++    K+     A + + +ML   +  +   +   +   C+   L  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
               V M   GV  +   YN L+ G CK   + EA+ + + M    ++ D  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C + +LE A  +   M + G + +    + +ID   K+  +E+A S+  ++ + G+ PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           V  +++LID  CK    D A  L+ EM  + L P+ V +  LI  L K G +++ L L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M +  I  +V+  +SLI+G  K G +  A         +      +P    Y+ +I  L
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG----LTPTAASYSPLIAGL 453

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G +  A +L  +M    +  +N T+T ++ G  + K+M +   L   MI   ++P+ 
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           V   VM+ GY   G+++ AF+  + + E  +   + + +T RS +  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL---KPDNYTYRSLISGL 558


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 239/477 (50%), Gaps = 12/477 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN-----ALLNGLIKKGKFD 101
           +  P++  ++TL+ +F + G  +EA  + +++E      + N      +++ L ++G  +
Sbjct: 232 RVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLE 291

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           +  +  + M L    A   TY  LI     +G V KA  L  EM ++GI PTVV Y  +I
Sbjct: 292 NAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAII 350

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           HGL    +   A+  F  MR  G++P++ TYN+L++ YCK  ++  AL    ++    L 
Sbjct: 351 HGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLA 410

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P V+T+  L+DG C++G+L  A      M + G FP++  Y  L++G  K  NL  A   
Sbjct: 411 PTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREF 470

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    + PD F YN  I     +     A  L + M  +GI  + VTYN +IDG CK
Sbjct: 471 FDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCK 530

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G+++ A  + ++M   G++P+ +T++ LI   C+ G +  A  L   MV   L P VV 
Sbjct: 531 TGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVT 590

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+    + GN+      +++ML+  I P+  T + LIH L   GR   A   F E  
Sbjct: 591 YTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEML 650

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           ++      +PN   Y  +I   C +G    A +L+ +M  + + PD CT+  + +G 
Sbjct: 651 ERG----LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 242/513 (47%), Gaps = 42/513 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P ++ CN +L  L    ++D V   Y EM+   +   +VTY  L+D    +G   +A 
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 140 NLFDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L  EM  +G       V + ++I  L  E  +  A  +  SMR      + +TYN L+ 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS-FTYNPLIT 316

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
              +   V +A     EM +  + P VVT+  ++ GL K  +  AA   F  M   G+ P
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  YN L++ +CKAGNL EA+ L  ++ +  ++P V TYN LI G C +G L  A  L 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKA--------------------LSVCSQMTE 357
           ++M ++G   +V TY  L++G  K  ++  A                      +C+++T 
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496

Query: 358 ---------------KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
                          KG+ P+ VT++ +IDG CK GN+  A  L T+MV   L PD + +
Sbjct: 497 SSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITY 556

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LI    + G ++E  +L   M+   + PSV T + L+H   + G + +A  +F +  D
Sbjct: 557 TCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLD 616

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                   PN + Y  +I ALC  G+   A + F +M    L P+  TYT ++ G  R  
Sbjct: 617 VG----IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREG 672

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              D + L  +M + GI PD   +  + +G+ E
Sbjct: 673 NWADAIRLYFEMHQNGIPPDYCTHNALFKGFDE 705



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 212/440 (48%), Gaps = 45/440 (10%)

Query: 18  IKDVTENLLKS---RKPHHVCYSVFNALNSLEIPKFNPS-VFSTLIIAFSEMGHIEEALW 73
           + DVT N++ S   R+ H    +    ++S+ + K   S  ++ LI A  E G + +A  
Sbjct: 272 LNDVTFNVVISFLAREGH--LENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEA 329

Query: 74  VYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCC 130
           +  ++E   ++P +   NA+++GL+K  + ++    + EM   GL+ DV+TY  L++  C
Sbjct: 330 LQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYC 389

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
             G++ +AL L  ++   G+ PTV+ Y  LI G C    + EA  +   M E G  P++ 
Sbjct: 390 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVC 449

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPN--------------------------- 223
           TY  LM+G  KV ++  A EF+ EML   LQP+                           
Sbjct: 450 TYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVM 509

Query: 224 --------VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                    VT+ V++DGLCK G L+ A      M   G+ P+   Y CLI  HC+ G L
Sbjct: 510 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLL 569

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA  L + M    + P V TY IL+   C  G L  A G  +KM   GI  N +TYN L
Sbjct: 570 REARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 629

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C  G    A     +M E+G+ PN  T++ LIDG C+ GN   A+ LY EM    +
Sbjct: 630 IHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 689

Query: 396 VPDVVVFTALIDGLSKDGNM 415
            PD     AL  G   +G+M
Sbjct: 690 PPDYCTHNALFKGFD-EGHM 708



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 203/422 (48%), Gaps = 17/422 (4%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P V     ++  L +  +  +  +++  M +  V P + TYN L+D + K    + A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 209 LEFYHEMLHHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
                EM         N VTF V++  L + G L  A      M +     + F YN LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLI 315

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
               + G + +A +L  EME   I P V TYN +I GL    Q E A+    +M   G+L
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +V+TYNSL++ YCK G++++AL +   +   G+ P V+T+++LIDG C+ G++  A  L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EMV +   PDV  +T L++G  K  N+      + EML   + P  F  ++ I     
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
               S  + F L +     G Y  P+ V Y  II  LC  G +  A +L + M SD L+P
Sbjct: 496 LS--STPMAFQLREVMMLKGIY--PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP 551

Query: 507 DNCTYTTML-----RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           D  TYT ++     RGLLR  R      LL  M+  G+ P  V   ++V      G+L S
Sbjct: 552 DCITYTCLIHAHCERGLLREAR-----KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 562 AF 563
           A+
Sbjct: 607 AY 608



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 197/426 (46%), Gaps = 7/426 (1%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTYNALMDG 198
           ++ EM+   +EPT+V Y  L+     E +  EA  + + M  +  G   N  T+N ++  
Sbjct: 224 VYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISF 283

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
             +   +  A++    M   + + +  T+  L+  L + G +R A    + M   G+ P 
Sbjct: 284 LAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPT 342

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  YN +I G  K      A    +EM    + PDV TYN L+   C  G L+ A  LL 
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            + + G+   V+TYN+LIDGYC+ GD+ +A  +  +M E+G  P+V T++ L++G  K  
Sbjct: 403 DLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR 462

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           N+  A   + EM+ K L PD   +   I       +     +L + M+   I P   T +
Sbjct: 463 NLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYN 522

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +I GL K G + +A      KT     G   P+ + Y  +I A C  G + +A KL + 
Sbjct: 523 VIIDGLCKTGNLKDAKRL---KTKMVSDGL-QPDCITYTCLIHAHCERGLLREARKLLNG 578

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M SD L+P   TYT ++    R   +         M+ +GI P+ +   V++      G 
Sbjct: 579 MVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGR 638

Query: 559 LKSAFR 564
              AFR
Sbjct: 639 TPLAFR 644



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 7/252 (2%)

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G+  +V   N ++         +   +V  +M +  VEP +VT+++L+D   K G  D 
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDE 255

Query: 383 AMGLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           A  L  EM  +      + V F  +I  L+++G+++  ++L   M  +K   S FT + L
Sbjct: 256 ASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPL 314

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I  L + G +  A    +E  ++       P  V Y AII  L    Q   A   F++MR
Sbjct: 315 ITALLERGFVRKAEALQMEMENEG----IMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  L PD  TY ++L    +A  + + + LL D+ + G+ P  +    ++ GY   GDL 
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLA 430

Query: 561 SAFRCSEFLKES 572
            A R  E + E 
Sbjct: 431 EARRLKEEMVEQ 442


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 259/552 (46%), Gaps = 42/552 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  +  +++EA  V  ++E   + P +   ++++NG +K+G  D   E+ 
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G+  +VVTYG LID          AL ++ +M+ +G++    I   L++GL   
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA ++F+     G+  +   Y  L+DG  K  D+  A +F  E++  N+ P+ V +
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            V ++ LC +G+ + A +F   M   G+ P+   YN +I  HC+ G   +A+ L  EM+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG----------------------- 324
             I P++ TYN L+ GL G G +E A+ LL +M   G                       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 325 ------------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                       + A++  YN+L+   C  G   KA  V  +M   G+ P+ +TF++LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK+ ++D A   Y +M+ +++ P++  F  L+ GL   G + E   +  EM ++ + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T   L  G  K      A+  + E   K   G+  P    Y A+I      G + +A
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGK---GFV-PKVSTYNALISDFTKAGMMTQA 853

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +LF DM+   + P +CTY  ++ G  R +   +V   L DM + G  P       + R 
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 553 YQENGDLKSAFR 564
           + + G    A R
Sbjct: 914 FSKPGMTWQAQR 925



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 255/570 (44%), Gaps = 28/570 (4%)

Query: 7   NAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMG 66
           NA LY + R  +      LL+S +P  V Y++                   L+ A S+  
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSSRPTTVAYNI-------------------LLAALSDHA 117

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL- 125
           H    L    K  V       N LL GL + G+ D+           G+   + + G L 
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA--AALADRAGGITPWMSSAGTLS 175

Query: 126 -IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
            +D   G GD   AL++ D M  +G+   VV Y  L+ G C   ++  A  +   M+E G
Sbjct: 176 LLDIA-GFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V PN+ TY   +  YC+   V  A + Y  M+ + +  +VVT   L+ GLC+ G    A 
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M K G  PN   Y  LID   KAG   E +SL  EM    +  D+ TY  L+  L
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G+ +  +  L+    + +  N VTY  LID  CK  ++++A  V  +M EK + PNV
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VTFSS+I+G  K G +D A      M  + + P+VV +  LIDG  K       L +Y +
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML   +  + F V SL++GL +NG+I  A+  F + +    G   S +HV Y  +I  L 
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS----GSGLSLDHVNYTTLIDGLF 530

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G +  A K   ++   N+ PD   Y   +  L    +  +    L +M  MG+ PD  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQS 590

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRI 574
               M+  +   G+   A +    +K S I
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSI 620



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 232/482 (48%), Gaps = 4/482 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+ G  + G+ D+     + M   G+  +V TY   I   C    V +A +L++ M+ 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+   VV  + L+ GLC + +  EA ++FR M + G  PN  TY  L+D   K      
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
            L    EM+   +  ++VT+  LMD L K G+     +         + PN   Y  LID
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CKA N+ EA  +  EME+  ISP+V T++ +I G    G L+ A    + M + GI  
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           NVVTY +LIDG+ K    + AL V   M  +GV+ N     SL++G  + G I+ AM L+
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +     L  D V +T LIDGL K G+M    +  +E+++  + P     +  I+ L   
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G+   A +F  E  +        P+   Y  +I + C  G+  KA KL  +M+  +++P+
Sbjct: 568 GKFKEAKSFLTEMRNMG----LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TY T++ GL     +     LL +M+  G  P ++ ++ +++   ++  L       E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 568 FL 569
           ++
Sbjct: 684 WM 685



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 244/513 (47%), Gaps = 9/513 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPA----IQACNALLNGLIKKGKFDSVWEFYEE 109
             S L+      G   EA  ++R+++ + A    +  C  L++ L K G+   +     E
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT-LIDSLAKAGRGKELLSLLGE 334

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G+V D+VTY  L+D    QG   +  +     +   + P  V YT+LI  LC  + 
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EAE +   M E  + PN+ T++++++G+ K   +++A E+   M    + PNVVT+G 
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG  K     AA   +  M   GV  N F+ + L++G  + G + EAM+L  +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +S D   Y  LI GL   G +  A    Q++    +L + V YN  I+  C  G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           S  ++M   G++P+  T++++I   C+ G    A+ L  EM + S+ P+++ +  L+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G +++   L  EM+ A  +PS  T   ++    ++ R    L+  L+  +       
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR----LDVILDIHEWMMNAGL 690

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             +  +Y  ++Q LCY G   KA+ +  +M    + PD  T+  ++ G  ++  + +   
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             A M+   I P+      ++ G +  G +  A
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 240/516 (46%), Gaps = 7/516 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + ++  I+ +     +EEA  +Y  +    VL  +   +AL+ GL + G+F   +  +
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G   + VTY  LID     G   + L+L  EM+ +G+   +V YT L+  L  +
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  E +   R      + PN  TY  L+D  CK  +V+ A +   EM   ++ PNVVTF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++G  K G L  A  +   M + G+ PN+  Y  LIDG  K      A+ +  +M  
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  + L+ GL   G++E A  L +     G+  + V Y +LIDG  K GDM  
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A     ++ ++ + P+ V ++  I+  C  G    A    TEM    L PD   +  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              + G   + L+L  EM  + I P++ T ++L+ GLF  G +  A  + L   +    G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA-KYLLN--EMVSAG 654

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + +  ++QA     ++     +   M +  L  D   Y T+L+ L         
Sbjct: 655 F-SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            ++L +M+  GI PD +    ++ G+ ++  L +AF
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 254/507 (50%), Gaps = 47/507 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI------EVLPAIQACNALLNGLIKKGKFDS 102
           K + + ++ L++  S    ++E + +Y+++       V P +   N +LN   K G    
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207

Query: 103 VWEFYEEMVLCGLVADVVTY-----------------GV--------------LIDCCCG 131
              F+  ++ C    D+ TY                 GV              LI   C 
Sbjct: 208 ARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCE 267

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G + +AL  +  M + G  PTV  YT+L+  LC   + +EA S+F  MRE G  PN+YT
Sbjct: 268 AGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYT 327

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  L+D  CK   ++ AL+  +EM+   + P+VV F  L+   CK G +  A      M 
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              V PN+  YN LI G C+  ++  AM+L ++M + ++SPDV TYN LI GLC VG ++
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L + M ++G   +  T+N+ +   C+ G + +A  +   + EK V+ N   +++LI
Sbjct: 448 SASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CKAG I+ A  L+  M+ +  +P+ + F  +IDGL K+G +++ + L ++M +  + 
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVK 567

Query: 432 PSVFTVSSLIHGLFKN---GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           P++ T + L+  + K     R +  LN  +        GY  PN V Y A I+A C  G+
Sbjct: 568 PTLHTYNILVEEVLKEYDFDRANEILNRLI------SSGY-QPNVVTYTAFIKAYCSQGR 620

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTML 515
           + +A ++   ++++ +  D+  Y  ++
Sbjct: 621 LEEAEEMVIKIKNEGVLLDSFIYNLLI 647



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 255/537 (47%), Gaps = 17/537 (3%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           +P+ N   ++ LI    E G + EAL  + ++      P ++    L+  L + G+    
Sbjct: 250 MPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEA 309

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + EM   G   +V TY VLID  C +G + +AL + +EM++KG+ P+VV +  LI  
Sbjct: 310 LSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C    M +A  +   M    V PN+ TYN L+ G+C+   ++RA+   ++M+   L P+
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+  L+ GLC+VG + +A   F  M + G  P+ + +N  +   C+ G + EA  +  
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +++  +  +   Y  LI G C  G++E A  L ++M  E  L N +T+N +IDG  KEG
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A+ +   M +  V+P + T++ L++   K  + D A  +   ++     P+VV +T
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           A I      G ++E   +  ++    +    F  + LI+     G + +A         +
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL----RR 665

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS-DMRSDNLRPDNC-TYTTMLRGLLRA 521
             G  C P+++ Y+ +++ L  +    + S     D+   N+  DN   ++ +  G+   
Sbjct: 666 MFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI--- 722

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
                  +L   M + G VP+      ++ G  + G L  AF     ++E  I  SE
Sbjct: 723 -----TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE 774



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 236/535 (44%), Gaps = 65/535 (12%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  F+ LI ++ + G +E+A+ V   +E   V P ++  N L+ G  +    D     
Sbjct: 358 PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             +MV   L  DVVTY  LI   C  G V  A  LF  MI  G  P    +   +  LC 
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA  +  S++E  V  N + Y AL+DGYCK   +  A   +  ML     PN +T
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F V++DGL K G+++ A      MAKF V P +  YN L++   K  +   A  + + + 
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                P+V TY   IK  C  G+LE AE ++ K+  EG+L +   YN LI+ Y   G ++
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657

Query: 347 KALSVCSQMTEKGVEPNVVTFSSL-----IDGQCKAGN----IDAAMG------------ 385
            A  V  +M   G EP+ +T+S L     I+   K G+    +D ++             
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSK 717

Query: 386 --------LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
                   L+ +M     VP++  ++ LI+GL K G +     LY  M E  I+PS    
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777

Query: 438 SSLIHGLFKNGRISNALNFF-----------LEK-------------TDKTDGGYCSP-- 471
           +SL+    K G    A+              LE               +K +  +CS   
Sbjct: 778 NSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLR 837

Query: 472 -----NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                + V +  +I  L   G + + S+L + M  +  R    TY+ +++ L RA
Sbjct: 838 CGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 193/445 (43%), Gaps = 38/445 (8%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIK 96
           LN +   K +P V  ++TLI    E+G ++ A  ++R   +    P     NA +  L +
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            G+     +  E +    + A+   Y  LID  C  G +  A +LF  M+ +   P  + 
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           + ++I GL  E K+ +A  +   M +  V P L+TYN L++   K  D +RA E  + ++
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
               QPNVVT+   +   C  G L  A    + +   GV  + F+YN LI+ +   G L 
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG--------------------- 315
            A  +   M      P   TY+IL+K L  V +    EG                     
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHL--VIEKHKKEGSNPVGLDVSLTNISVDNTDIW 715

Query: 316 ----------LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
                     L +KM + G + N+ TY+ LI+G CK G +  A S+   M E G+ P+ +
Sbjct: 716 SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI 775

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             +SL+   CK G    A+ L   M+  S +  +  +  LI GL +  N ++   ++  +
Sbjct: 776 IHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSL 835

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRI 450
           L             LI GL K G +
Sbjct: 836 LRCGYNYDEVAWKVLIDGLAKTGYV 860



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 170/391 (43%), Gaps = 42/391 (10%)

Query: 208 ALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN-------- 258
           AL F+  +  HHN   ++ T   L+  L +   LRAA N    M K    P+        
Sbjct: 69  ALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNL 128

Query: 259 ----------------------IFVYNCLIDGHCKAGNLFEAMSLCSEM---EKFEISPD 293
                                 +  YN L+    +   + E +SL  EM       + P+
Sbjct: 129 LRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPN 188

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + T N ++   C +G +  A     ++ +     ++ TY SL+ GYC+  D+E+A  V  
Sbjct: 189 LITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFC 248

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M  +    N V++++LI G C+AG +  A+  +  M      P V  +T L+  L + G
Sbjct: 249 VMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESG 304

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
              E L L+ EM E    P+V+T + LI  L K GR+  AL    E  +K      +P+ 
Sbjct: 305 RELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG----VAPSV 360

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V + A+I + C  G +  A  +   M S  + P+  TY  ++ G  R K M   M LL  
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M++  + PD V    ++ G  E G + SA R
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 136/354 (38%), Gaps = 67/354 (18%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ +I    + G +++A+ +     K +V P +   N L+  ++K+  FD   E  
Sbjct: 534 NSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEIL 593

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKA----------------------------L 139
             ++  G   +VVTY   I   C QG + +A                            +
Sbjct: 594 NRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCM 653

Query: 140 NLFD-------EMIDKGIEPTVVIYTILIHGLCNENKMVEAES----------------- 175
            L D        M   G EP+ + Y+IL+  L  E    E  +                 
Sbjct: 654 GLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTD 713

Query: 176 ------------MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                       +F  M ECG VPNL TY+ L++G CKV  +N A   YH M    + P+
Sbjct: 714 IWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPS 773

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            +    L+   CK+G    A      M +     ++  Y  LI G  +  N  +A ++  
Sbjct: 774 EIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFC 833

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
            + +   + D   + +LI GL   G ++    LL  M K G   +  TY+ L+ 
Sbjct: 834 SLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 245/509 (48%), Gaps = 31/509 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVW 104
           K N   +S +I    +   +++AL +++ +      +P +   N+LL GL    +    +
Sbjct: 105 KLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAF 164

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             +E M   G   +V++Y  L+D  C  G + +A  L++EM++K   P +V YT  + GL
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGL 224

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTY-----------------NALMDGYCKVADVNR 207
           C  N++ EA    R M   G   +   +                 N +++  C+   ++ 
Sbjct: 225 CKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDE 284

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF---PNIFVYNC 264
           A + + EM+  N  P+   F  L+  +CK   L      F  M     F   PN+  YN 
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           ++D  CKA  L EA  L +EM  + +SPDV TY+ L+ GLC +G+L+ A  LL++M KEG
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +  T  S+++   K G ++ ALS    M  +G  P++VT+++L+DG CKAG ID A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
               +MV     PDV  +T +I  L + G       +++EM++  + P      SL+ GL
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +NG    AL     KT       C P+ V++  ++  LC  G+   A ++   M     
Sbjct: 525 ARNGLEDLALELL--KT-----SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGF 577

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             D  TY +++ GL +  ++     L+ D
Sbjct: 578 PADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 247/506 (48%), Gaps = 25/506 (4%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W+ R+     ++   N  L+ L K       +E +++M   G   D  TY +++   C  
Sbjct: 27  WLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKA 86

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYT 191
           G++ KA  L  ++ + G++  V+ Y+++I G C  +++ +A  +F++M    G VP++ T
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVT 146

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           +N+L+ G C    ++ A   +  M     +PNV+++  L+DGLCK G L  A   +  M 
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +    P++  Y   + G CKA  + EA   C +M       D   ++ +I  LC  G  E
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 312 GAE----------GLLQ---KMYKEGILAN----VVTYNSLIDGYCKEGDMEKALSVCSQ 354
            A+          G+L    K ++E I  N       +N+LI   CK   +   + +  +
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326

Query: 355 ---MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M E    PN+ T++ ++D  CKA  +D A  L  EM    L PDVV ++AL+DGL K
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +     L +EM +  + P  FT +S+++ L K G++  AL+    +T K  G   +P
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL--ETMKARGS--TP 442

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V Y  ++  LC  G+I +A    + M +    PD  +YT ++  L R+ +      + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENG 557
            +M+K G++PD V+   ++ G   NG
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNG 528



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 207/435 (47%), Gaps = 61/435 (14%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +STL+    + G ++EA  ++ ++     +P + A  + + GL K  +     +   +MV
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALN-----------------LFDEMIDKGIEPTV 154
             G  AD V +  +I   C +G   +A N                  F+EMI +   P+ 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301

Query: 155 VIYTILIHGLCNENKMVEAESMF---RSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
            ++  LIH +C   ++ +   +F   +SM+E    PNL TYN ++D  CK   ++ A E 
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV---------- 261
            +EM ++ L P+VVT+  L+DGLCK+G+L  A +    M+K GVFP+ F           
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 262 -------------------------YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                                    YN L+DG CKAG + EA++  ++M   + +PDVF+
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y I+I  LC  GQ  GA  + Q+M K G+L + V Y+SL+DG  + G  + AL +   + 
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LK 538

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
               +P+ V    ++DG CKAG  + A  +   M       D   + +++ GL K G + 
Sbjct: 539 TSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598

Query: 417 ETLRLYKEMLEAKIT 431
           +  +L  +  E   +
Sbjct: 599 KARQLVDDASETHTS 613



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 19/408 (4%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R+ G   +++TYN  +D   K      A E + +M      P+  T+ +++ GLCK GEL
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNI 299
             A      + + GV  N+  Y+ +IDG CKA  + +A+ +   M       PDV T+N 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+KGLC   ++  A  L + M K G   NV++Y++L+DG CK G +++A  +  +M EK 
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA--------------- 404
             P++V ++S + G CKA  +  A     +MV K    D V F+                
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 405 --LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             +I+ L + G + E  + ++EM+     PS    ++LIH + K+ R+ + +  F ++  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF-QRMK 328

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                YC PN   Y  ++  LC   Q+ +A +L ++M +  L PD  TY+ ++ GL +  
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++     LL +M K G+ PD+  +  ++    + G +  A    E +K
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 13/342 (3%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL- 81
           E+L +S      C + F  + S   P  +  +F+TLI A  +   + + + ++++++ + 
Sbjct: 274 EHLCRSGMLDEACKT-FEEMISRNHPP-SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 82  -----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
                P ++  N +++ L K  + D   E   EM   GL  DVVTY  L+D  C  G + 
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A +L +EM  +G+ P       +++ L    K+  A S   +M+  G  P+L TYN L+
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           DG CK   ++ A+ F  +M+     P+V ++ +++  LC+ G+   A   F  M K GV 
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-SPDVFTYNILIKGLCGVGQLEGAEG 315
           P+  +Y+ L+DG  + G   E ++L  E+ K  +  PD   + +++ GLC  G+ E A  
Sbjct: 512 PDTVLYHSLLDGLARNG--LEDLAL--ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACE 567

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           ++++M   G  A+  TY S++ G  K G ++KA  +    +E
Sbjct: 568 VVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 5/174 (2%)

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V  +   +D L+K    +     +++M      P  FT S ++ GL K G +  A     
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRPDNCTYTTMLRG 517
           +  +         N + Y+ +I   C   ++  A ++F  M S     PD  T+ ++L+G
Sbjct: 98  QLRESG----VKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKG 153

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           L   +RM +  +L   M K G  P+ +    ++ G  + G L  A R  E + E
Sbjct: 154 LCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 243/484 (50%), Gaps = 6/484 (1%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E G     L   R+  ++P + + N ++ G  +  + +   +   EM   G    +VT+G
Sbjct: 157 EFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWG 216

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID  C  G + +A+ L  EM  KG+E  +++YT LI G C+  ++   +++F  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P   TYN L+ G+CK+  +  A E +  M+   ++PNV T+  L+DGLC VG+ + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M +    PN+  YN +I+  CK   + +A+ +   M+K    PD  TYN L+ G
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396

Query: 304 LCGVGQLEGAEGLLQKMYKEGILA--NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           LC  G L+ A  LL  M K+      +V+++N+LI G CK   + +AL +   + EK   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            ++VT + L++   K+G+++ AM L+ ++    +VP+   +T +IDG  K G +     L
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M  +++ PSVF  + L+  L K G +  A   F E+  + D     P+ + +  +I 
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLF-EEMQRDDS---FPDVISFNIMID 572

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                G I  A  L   M    L PD  TY+ ++   L+   + + +     MI  G  P
Sbjct: 573 GSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632

Query: 542 DAVI 545
           DA I
Sbjct: 633 DAHI 636



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 250/485 (51%), Gaps = 8/485 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A N L+  L++    +  + FY +M+      + V+   L++C         A  +   M
Sbjct: 74  AGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALM 133

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           + +G    V  Y IL+ GLC   +  +A S+ R MR+  ++P++ +YN ++ G+C+  ++
Sbjct: 134 LKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKEL 193

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            +AL+  +EM       ++VT+G+L+D  CK G++  A      M   G+  ++ VY  L
Sbjct: 194 EKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSL 253

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G C  G L    +L  E+ +   SP   TYN LI+G C +G+L+ A  + + M + G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NV TY  LIDG C  G  ++AL + + M +K  EPNVVT++ +I+  CK   +  A+ 
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALE 373

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITPSVFTVSSLIHG 443
           +   M  +   PD + + +L+ GL   G++ E  +L   ML+  +   P V + ++LIHG
Sbjct: 374 IVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG 433

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K  R+  AL+ +    +K   G     ++L  + +++    G + KA +L+  + +  
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKS----GDVNKAMELWKQISNSK 489

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN-QVMVRGYQENGDLKSA 562
           + P++ TYTTM+ G  +   ML+V   L   +++  +P +V +   ++    + G L  A
Sbjct: 490 IVPNSDTYTTMIDGFCKTG-MLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQA 548

Query: 563 FRCSE 567
           +R  E
Sbjct: 549 WRLFE 553



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 199/419 (47%), Gaps = 44/419 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYE 108
           V+++LI  F + G ++    ++   EVL     P     N L+ G  K G+     E +E
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFD--EVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFE 306

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M+  G+  +V TY  LID  CG G   +AL L + M+ K  EP VV Y I+I+ LC ++
Sbjct: 307 FMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDS 366

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVT 226
            + +A  +   M++    P+  TYN+L+ G C   D++ A +  + ML  +    P+V++
Sbjct: 367 LVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426

Query: 227 FGVLMDGLCK-----------------------------------VGELRAAGNFFVHMA 251
           F  L+ GLCK                                    G++  A   +  ++
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              + PN   Y  +IDG CK G L  A  L  +M   E+ P VF YN L+  LC  G L+
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLD 546

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L ++M ++    +V+++N +IDG  K GD++ A S+   M+  G+ P++ T+S LI
Sbjct: 547 QAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLI 606

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +   K G +D A+  + +M+     PD  +  +++      G   +     K++++  +
Sbjct: 607 NRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 6/379 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI     +G  +EAL +     + +  P +   N ++N L K        E  
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--IEPTVVIYTILIHGLC 165
           E M       D +TY  L+   C +GD+ +A  L   M+      +P V+ +  LIHGLC
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLC 435

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             N++ +A  ++  + E     ++ T N L++   K  DVN+A+E + ++ +  + PN  
Sbjct: 436 KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSD 495

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++DG CK G L  A      M    + P++F YNCL+   CK G L +A  L  EM
Sbjct: 496 TYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++ +  PDV ++NI+I G    G ++ AE LL  M   G+  ++ TY+ LI+ + K G +
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A+S   +M + G EP+     S++      G  D       ++V K +V D  +   +
Sbjct: 616 DEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTV 675

Query: 406 IDGL-SKDGNMKETLRLYK 423
           +D + S  GNM    RL +
Sbjct: 676 MDYMCSSSGNMDIAKRLLR 694



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A G+L  M K G   NV  YN L+ G C+  +  KA+S+  +M +  + P+VV+++++I 
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C+   ++ A+ L  EM        +V +  LID   K G M E + L KEM    +  
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +   +SLI G    G +      F E  ++ D    SP  + Y  +I+  C  G++ +A
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLERGD----SPCAITYNTLIRGFCKLGRLKEA 301

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S++F  M    +RP+  TYT ++ GL    +  + + LL  M++    P+ V   +++  
Sbjct: 302 SEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINK 361

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             ++  +  A    E +K+ R   +  +  T  S LG L
Sbjct: 362 LCKDSLVADALEIVELMKKRR---TRPDNITYNSLLGGL 397


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 243/486 (50%), Gaps = 14/486 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           EI   N   +ST++        +E+A+   R  E   + P++ + N++++   K G  D 
Sbjct: 200 EIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDM 259

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              F+  ++ CGLV  V ++ +LI+  C  G + +AL L  +M   G+EP  V Y IL+ 
Sbjct: 260 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVK 319

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ- 221
           G      +  A  + + M + G+ P++ TY  L+ G C++ +++  L    +ML    + 
Sbjct: 320 GFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFEL 379

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            +++ + V++ GLCK G +  A + F  +  +G+ P++  Y+ +I G CK G    A+ +
Sbjct: 380 KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRV 439

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P+  T   ++ GLC  G L  A  LL  +   G   +++ YN +IDGY K
Sbjct: 440 YDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAK 499

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+AL +     E G+ PNV TF+SLI G CK  NI  A  +   + +  LVP VV 
Sbjct: 500 SGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVS 559

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK- 460
           +T L+D  +  G++K    L +EM    I P+  T S +  GL +  ++ N      E+ 
Sbjct: 560 YTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERI 619

Query: 461 --------TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
                    D    G  +P+ + Y  IIQ LC    + +A +LF  M+S NL P + TY 
Sbjct: 620 LEKFNHVLRDMESEG-ITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYN 678

Query: 513 TMLRGL 518
            ++  L
Sbjct: 679 ILIDSL 684



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 263/524 (50%), Gaps = 43/524 (8%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGK 99
           +I  F  S FSTL+++     HI      +++++V+         + C  L N   K   
Sbjct: 87  DIYGFRHSRFSTLLVS-----HIFAGQRRFKELQVILEQLLQEEGKLCELLSNSFRK--- 138

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
               WE        GLV D++ +            V ++L +  +M D+ +  +   Y  
Sbjct: 139 ----WES------TGLVWDMLLF-----LSSRLRMVDESLYILKKMKDRNLNVSTQSYNS 183

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +++     +KM +   +++ +++     N +TY+ ++DG C+   +  A+ F       +
Sbjct: 184 VLYNFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKD 236

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           + P+VV+F  +M   CK+G +  A +FF  + K G+ P+++ +N LI+G C  G++ EA+
Sbjct: 237 IGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 296

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L S+M K  + PD  TYNIL+KG   +G + GA  ++Q M  +G+  +V+TY  L+ G 
Sbjct: 297 ELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQ 356

Query: 340 CKEGDMEKALSVCSQMTEKGVE-PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           C+ G+++  L +   M  +G E  +++ +S ++ G CK G +D A+ L+ ++    L PD
Sbjct: 357 CQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +V ++ +I GL K G     +R+Y EM   +I P+  T+ +++ GL + G +  A +   
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLD 476

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                 D    + + +LY  +I      G I +A +LF       + P+  T+ +++ G 
Sbjct: 477 SLISSGD----TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGY 532

Query: 519 LRAKRMLDVMMLLADMIKM-GIVPDAVINQVMVRGYQENGDLKS 561
            + + + +   +L D+IK+ G+VP  V    ++  Y   G +KS
Sbjct: 533 CKTQNIAEARKIL-DVIKLYGLVPSVVSYTTLMDAYANCGSIKS 575



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 245/544 (45%), Gaps = 67/544 (12%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV+S   LI     +G I EAL +   +    V P     N L+ G    G      E 
Sbjct: 274 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEV 333

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE-PTVVIYTILIHGLC 165
            ++M+  GL  DV+TY +L+   C  G++   L L  +M+ +G E  +++ Y++++ GLC
Sbjct: 334 IQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLC 393

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ EA S+F  +   G+ P+L  Y+ ++ G CK+   + A+  Y EM +  + PN  
Sbjct: 394 KTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSR 453

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T G +M GLC+ G L  A +    +   G   +I +YN +IDG+ K+G + EA+ L    
Sbjct: 454 TLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVA 513

Query: 286 EKFEISPDVFTYNILIKGLCGV-----------------------------------GQL 310
            +  I+P+V T+N LI G C                                     G +
Sbjct: 514 IESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSI 573

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCK------------EGDMEKALSVCSQMTEK 358
           +  E L ++M  EGI    VTY+ +  G C+            E  +EK   V   M  +
Sbjct: 574 KSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESE 633

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ P+ +T++++I   C+  ++  A  L+ +M  ++L P    +  LID L   G +++ 
Sbjct: 634 GITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKA 693

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            R    + +  ++ S F  +++I      G    A+  F +  D+  G   S     Y+A
Sbjct: 694 DRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDR--GFNVSIRD--YSA 749

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC     +++   F  M S  + PD          L   + M+    LL+  IK G
Sbjct: 750 VINRLCRRHLAIESKYFFCLMLSRGISPD----------LDICEVMIKSDELLSWTIKWG 799

Query: 539 IVPD 542
           ++PD
Sbjct: 800 LLPD 803



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 212/426 (49%), Gaps = 22/426 (5%)

Query: 151 EPTVVIYTILIHGLCNENKMV-EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           E T +++ +L+  L +  +MV E+  + + M++  +  +  +YN+++  +    + ++  
Sbjct: 140 ESTGLVWDMLLF-LSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNF---RETDKMW 195

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + Y E+   N      T+  ++DGLC+  +L  A  F        + P++  +N ++  +
Sbjct: 196 DVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSY 251

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A S    + K  + P V+++NILI GLC VG +  A  L   M K G+  + 
Sbjct: 252 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 311

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYN L+ G+   G +  A  V   M +KG+ P+V+T++ L+ GQC+ GNID  + L  +
Sbjct: 312 VTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKD 371

Query: 390 MV-----IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           M+     +KS++P    ++ ++ GL K G + E L L+ ++    +TP +   S +IHGL
Sbjct: 372 MLSRGFELKSIIP----YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGL 427

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G+   A+  + E   K       PN     AI+  LC  G +L+A  L   + S   
Sbjct: 428 CKLGKFDMAVRVYDEMCYKR----ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD 483

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             D   Y  ++ G  ++  + + + L    I+ GI P+      ++ GY +  ++  A +
Sbjct: 484 TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARK 543

Query: 565 CSEFLK 570
             + +K
Sbjct: 544 ILDVIK 549



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 42/322 (13%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   Y+ ++DG C+   L +A+      E  +I P V ++N ++   C +G ++ A+   
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             + K G++ +V ++N LI+G C  G + +AL + S M + GVEP+ VT++ L+ G    
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  +  +M+ K L PDV+ +T L+ G  + GN+   L L K+ML        F +
Sbjct: 325 GMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRG-----FEL 379

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            S+I                                  Y+ ++  LC  G++ +A  LF 
Sbjct: 380 KSIIP---------------------------------YSVMLSGLCKTGRVDEALSLFY 406

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D+ +  L PD   Y+ ++ GL +  +    + +  +M    I+P++     ++ G  + G
Sbjct: 407 DLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKG 466

Query: 558 DLKSAFRCSEFLKESRIGSSET 579
            L  A      L +S I S +T
Sbjct: 467 MLLEA----RSLLDSLISSGDT 484



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 5/259 (1%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  +YKE    N  TY++++DG C++  +E A+        K + P+VV+F+S++   CK
Sbjct: 194 MWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCK 253

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   +  ++   LVP V     LI+GL   G++ E L L  +M +  + P   T
Sbjct: 254 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 313

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            + L+ G    G IS A     +  DK      SP+ + Y  ++   C  G I     L 
Sbjct: 314 YNILVKGFHLLGMISGAGEVIQDMLDKG----LSPDVITYTILLCGQCQLGNIDMGLILL 369

Query: 497 SDMRSDNLRPDNCT-YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            DM S      +   Y+ ML GL +  R+ + + L  D+   G+ PD V   +++ G  +
Sbjct: 370 KDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCK 429

Query: 556 NGDLKSAFRCSEFLKESRI 574
            G    A R  + +   RI
Sbjct: 430 LGKFDMAVRVYDEMCYKRI 448



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 15/268 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F++LI  + +  +I EA   L V +   ++P++ +   L++     G   S+ E  
Sbjct: 521 NVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELR 580

Query: 108 EEMVLCGLVADVVTYGVLIDCCCG-----------QGDVMKALN-LFDEMIDKGIEPTVV 155
            EM   G+    VTY V+    C            +  +++  N +  +M  +GI P  +
Sbjct: 581 REMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQI 640

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  +I  LC    +  A  +F+ M+   + P   TYN L+D  C    + +A  F + +
Sbjct: 641 TYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSL 700

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
              N+  +   +  ++   C  G+   A   F  +   G   +I  Y+ +I+  C+    
Sbjct: 701 QKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLA 760

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKG 303
            E+      M    ISPD+    ++IK 
Sbjct: 761 IESKYFFCLMLSRGISPDLDICEVMIKS 788


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 276/536 (51%), Gaps = 11/536 (2%)

Query: 43  NSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKK 97
           N ++I   NP +  F++++ AF E     EA   +   +     P +Q  N L+    KK
Sbjct: 103 NMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKK 162

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            +F+        M   GL  D+++YG LI+     G+++ A+ LFDEM  +G+ P V+ Y
Sbjct: 163 RQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCY 222

Query: 158 TILIHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
            ILI G   +   V+A  ++ R + E  V P++ TYN +++G CK+  ++ ++E ++ M 
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
            +   P++ TF  ++ GL K G   AA   F  M + G+ P++  YN ++ G  + G L 
Sbjct: 283 KNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLN 342

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +   L + M K     ++ +YN+LI+GL    ++E A    Q +++ G+ A+  TY  LI
Sbjct: 343 KCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLI 401

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +G CK G + KAL +  +   +G + +   +SS++ G CK G ++ A+ L  +M      
Sbjct: 402 NGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRK 461

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            +  VF +LI+G  +   ++E + + +EM      P+V + +++I+GL K  R S+A   
Sbjct: 462 LNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA--- 518

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           +L   +  + G   P+ + Y+ +I  LC   ++  A  L+    +  L+PD   +  ++ 
Sbjct: 519 YLSLKEMLEEGL-KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIH 577

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           GL  A+++   + +   M ++  VPD V +  ++ G  + GD   A +  + + E+
Sbjct: 578 GLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA 633



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 267/516 (51%), Gaps = 11/516 (2%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
            NP + S  TLI A ++ G++ +A+ ++ ++ V    P +   N L++G ++KG F    
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239

Query: 105 EFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           E ++ ++    +   V TY ++I+  C  G + +++ +++ M      P +  ++ +IHG
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           L        AE +F+ M E G+ P++ TYNA++ G  +   +N+  E ++ M  +N   N
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CN 358

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +V++ +L+ GL    ++  A  ++  + + G+  +   Y  LI+G CK G L +A+ +  
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E E      D F Y+ ++ GLC  G LE A  L+ +M K     N   +NSLI+GY +  
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+A+SV  +M  K   P VV+++++I+G CKA     A     EM+ + L PD++ ++
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYS 538

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDGL +   +   L L+ + +  ++ P +   + +IHGL    ++  AL  F +    
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C P+ V +  I++ L   G  ++A K++  +    L+PD  +Y    +GL    R
Sbjct: 599 N----CVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCAR 654

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           + D +  L D +  GI+P+A    V+VR   ++  L
Sbjct: 655 VSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 238/445 (53%), Gaps = 10/445 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++ +I    ++G ++E++ ++   +K E  P +   +++++GL K G F++  + 
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++EM+  GL  DV TY  ++      G + K   L++ M  K     +V Y +LI GL +
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIVSYNMLIQGLLD 371

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K+ +A   ++ + E G+  +  TY  L++G CK   +N+AL    E  +     +   
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFA 431

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++ GLCK G L  A      M K     N  V+N LI+G+ +A  L EA+S+  EM+
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             + +P V +YN +I GLC   +   A   L++M +EG+  +++TY+ LIDG C+   ++
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL++  Q   K ++P++   + +I G C A  +D A+ ++T+M   + VPD+V    ++
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           +GL K G+  E L+++  +LEA + P + + +    GL    R+S+A+ F  +  D+   
Sbjct: 612 EGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG-- 669

Query: 467 GYCSPNHVLYAAIIQALCYDGQILK 491
               PN   +  +++A+  D  +++
Sbjct: 670 --ILPNAPTWNVLVRAVVDDKPLME 692



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 220/477 (46%), Gaps = 44/477 (9%)

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMV 171
           C    DV    +     C   D  +ALNLF  M+D  G  P +  +  +++     N+  
Sbjct: 74  CTCSEDVALSAIKAYAKCSMPD--QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWR 131

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EAE  F   +  G+ PNL TYN L+   CK     +       M  + L P+++++G L+
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH---------------------- 269
           + L K G L  A   F  M+  GV P++  YN LIDG                       
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251

Query: 270 --------------CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
                         CK G L E+M + + M+K E SPD+FT++ +I GL   G    AE 
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           + Q+M + G+  +V TYN+++ G  + G + K   + + M++     N+V+++ LI G  
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLL 370

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
               ++ A+  +  +  + L  D   +  LI+GL K+G + + LR+ +E          F
Sbjct: 371 DNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTF 430

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             SS++HGL K G +  A    +E   +        N  ++ ++I       ++ +A  +
Sbjct: 431 AYSSMVHGLCKKGMLEQA----VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISV 486

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             +M+S +  P   +Y T++ GL +A+R  D  + L +M++ G+ PD +   +++ G
Sbjct: 487 LREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 7/380 (1%)

Query: 196 MDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +  Y K +  ++AL  +  M+      P + +F  +++   +  + R A  FF +    G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN+  YN LI   CK     +   L + M +  ++PD+ +Y  LI  L   G L  A 
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDG 373
            L  +M   G+  +V+ YN LIDG+ ++GD  KA  +  ++ TE  V P+V T++ +I+G
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +D +M ++  M      PD+  F+++I GLSK GN     ++++EM+E+ ++P 
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T ++++ GLF+ G+    LN   E  +      C  N V Y  +IQ L  + ++ +A 
Sbjct: 325 VRTYNAMLSGLFRTGK----LNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAI 379

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             +  +    L+ D+ TY  ++ GL +   +   + +L +    G   D      MV G 
Sbjct: 380 CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGL 439

Query: 554 QENGDLKSAFRCSEFLKESR 573
            + G L+ A      +K++R
Sbjct: 440 CKKGMLEQAVELIHQMKKNR 459


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 235/470 (50%), Gaps = 16/470 (3%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAI 84
           SRK      SVF ++   +    +  VF  L+  ++E G++ +A+  +R   K  +    
Sbjct: 138 SRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPF 197

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
             C  LL  +IK        EFY E++  G   +V T+ VL++  C +G V  A  +FDE
Sbjct: 198 NGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDE 257

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           +   G++PT V +  LI+G C    + E   +   M E  V P+++TY+AL+DG CK   
Sbjct: 258 IRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQ 317

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +  A   + EM    L PN VTF  L++G CK G +  A   +  M   G+  ++ +YN 
Sbjct: 318 LEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNT 377

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG CK G   EA     EM K  + PD FTY  L+ G C  G LE A  + ++M KEG
Sbjct: 378 LIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I  + V + ++I G C++G +  A     +M   G++P+  T++ ++DG CK G++    
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGF 497

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EM     +P V+ +  L++GL K G +K    L   ML   + P   T + L+ G 
Sbjct: 498 KLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGH 557

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            K+G++ +  N       KT+ G  S ++  Y +++  L       KASK
Sbjct: 558 CKHGKLGDFQNV------KTEMGLVS-DYASYRSLLHELS------KASK 594



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 208/368 (56%), Gaps = 10/368 (2%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L++   K++    ALEFY E+L     PNV TF VLM+ LCK G+++ A   F  + K G
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P    +N LI+G+CK+GNL E   L   ME+F + PDVFTY+ LI GLC   QLE A 
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN 322

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L ++M   G++ N VT+ +LI+G CK G ++ AL +  QM  KG++ ++V +++LIDG 
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G    A     EM  + L+PD   +T L+DG  K+G+++  L + KEM++  I    
Sbjct: 383 CKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN 442

Query: 435 FTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
              +++I GL ++G+I +A   L   L    K D G        Y  ++   C  G +  
Sbjct: 443 VAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDG-------TYTMVMDGFCKKGDVKM 495

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             KL  +M+SD   P   TY  ++ GL +  ++ +  MLL  M+ +G+VPD +   ++++
Sbjct: 496 GFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQ 555

Query: 552 GYQENGDL 559
           G+ ++G L
Sbjct: 556 GHCKHGKL 563



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 259/522 (49%), Gaps = 11/522 (2%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP 82
           +N+L S K HH   S+ N  N   +P  +   F   + ++    H  ++        +  
Sbjct: 66  KNILPSFKAHHFI-SLVNQ-NPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAH 123

Query: 83  AI-QACNALLNGLI-KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            + Q   +LL+ ++ +KGK  +   F   +   G ++    +  L+      G V  A+ 
Sbjct: 124 RMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQ 183

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            F       ++        L+  +   +  + A   +  + + G  PN+YT+N LM+  C
Sbjct: 184 CFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLC 243

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V  A   + E+    LQP  V+F  L++G CK G L       + M +F VFP++F
Sbjct: 244 KEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVF 303

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ LIDG CK   L +A  L  EM    + P+  T+  LI G C  G+++ A  + Q+M
Sbjct: 304 TYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQM 363

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           + +G+ A++V YN+LIDG CK G   +A     +MT++G+ P+  T+++L+DG CK G++
Sbjct: 364 FTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDL 423

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A+ +  EMV + +  D V FTA+I GL +DG + +  R  +EML A + P   T + +
Sbjct: 424 ELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMV 483

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G  K G +   + F L K  ++DG    P  + Y  ++  LC  GQ+  A  L + M 
Sbjct: 484 MDGFCKKGDVK--MGFKLLKEMQSDGHI--PGVITYNVLMNGLCKQGQVKNADMLLNAML 539

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +  + PD+ TY  +L+G  +  ++ D   +  +   MG+V D
Sbjct: 540 NLGVVPDDITYNILLQGHCKHGKLGDFQNVKTE---MGLVSD 578



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 215/406 (52%), Gaps = 9/406 (2%)

Query: 160 LIHGLCNENKMVEAESMFRSMREC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           L+H + +      A S+F S+ E  G + + + ++ALM  Y +   V+ A++ +     H
Sbjct: 132 LLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKH 191

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           NL+        L++ + K+     A  F++ +   G  PN++ +N L++  CK G + +A
Sbjct: 192 NLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDA 251

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--GILANVVTYNSLI 336
             +  E+ K  + P   ++N LI G C  G LE  EG   KM  E   +  +V TY++LI
Sbjct: 252 QLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLE--EGFRLKMVMEEFRVFPDVFTYSALI 309

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG CKE  +E A  +  +M ++G+ PN VTF++LI+GQCK G +D A+ +Y +M  K L 
Sbjct: 310 DGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLK 369

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D+V++  LIDGL K G  +E  +   EM +  + P  FT ++L+ G  K G +  AL  
Sbjct: 370 ADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE- 428

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            + K    +G     ++V + AII  LC DG+I+ A +   +M    L+PD+ TYT ++ 
Sbjct: 429 -MRKEMVKEG--IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMD 485

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           G  +   +     LL +M   G +P  +   V++ G  + G +K+A
Sbjct: 486 GFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNA 531


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 167/595 (28%), Positives = 284/595 (47%), Gaps = 48/595 (8%)

Query: 1   IFYVLANAKLYKNARC-LIKDVTENLLKSRKPHHVCYSVFNALNSLE-IPKFNPSV--FS 56
           + +V    +L K  +C   +DV   +LK+     +     +    +E I    P +  ++
Sbjct: 59  VVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYN 118

Query: 57  TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            L+ AF E   +E+A   L  +  + +LP +Q  N L+   +KK +F       + M   
Sbjct: 119 ALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSK 178

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            L  DV +YG +I+     GD++ AL +FDEM ++G+ P V+ Y I+I G       V+ 
Sbjct: 179 DLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQG 238

Query: 174 ESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           + ++ R ++   V PN+ TYN +++G CK+   + +LE +  M  +  + ++ T+  L+ 
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLIC 298

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GLC VG +  A   +  M K  V  ++  YN L++G C+AG + E+  L   M K E   
Sbjct: 299 GLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK-ENCH 357

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V +YNI I+GL    ++E A  + + + + G  A+  TY  LI G CK G + KAL + 
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKIL 417

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL-------------------------- 386
            +  + G + +   +SS++DG  K G +D A+G+                          
Sbjct: 418 KEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRA 477

Query: 387 ---------YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
                    + EM  K   P VV +  LI+GL K     +     KEMLE    P + T 
Sbjct: 478 SKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITY 537

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S L+ GL +  +I  ALN + +   K       P+  ++  ++  LC  G+I  A  L+S
Sbjct: 538 SLLMDGLCQGKKIDMALNLWRQVLVKG----LEPDVTMHNILMHGLCSAGKIEDALLLYS 593

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +M+  N  P+  T+ T++ GL +A+      ++ A M K G  PD +   + ++G
Sbjct: 594 NMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKG 648



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 269/525 (51%), Gaps = 42/525 (8%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W++ K ++ P + +   ++NG++K G   S  E ++EM   GLV DV+ Y ++ID    +
Sbjct: 174 WMWSK-DLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKR 232

Query: 133 GDVMKALNLFDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           GD ++   +++ ++ KG  + P VV Y ++I+GLC   +  E+  M+  M++     +L+
Sbjct: 233 GDYVQGKEIWERLV-KGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLF 291

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY++L+ G C V +V+ A+E Y EM+  ++  +VVT+  L++G C+ G+++ +   +V M
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMM 351

Query: 251 AKFG----VFPNIFV------------------------------YNCLIDGHCKAGNLF 276
            K      V  NIF+                              Y  LI G CK G+L 
Sbjct: 352 GKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLN 411

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+ +  E +      D F Y+ ++ GL   G+++ A G++ +M K G   +    N LI
Sbjct: 412 KALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLI 471

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +G+ +   +E+A+    +M  KG  P VV++++LI+G CKA     A     EM+ K   
Sbjct: 472 NGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWK 531

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD++ ++ L+DGL +   +   L L++++L   + P V   + L+HGL   G+I +AL  
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLL 591

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           +           C PN V +  ++  L    +   AS +++ M  +  +PD  +Y   L+
Sbjct: 592 YSNMKQSN----CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLK 647

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
           GL    R+ D + L  D +K GI+P ++   ++VR   + G L S
Sbjct: 648 GLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 264/529 (49%), Gaps = 10/529 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVW 104
           K    V  T++ A+++     EAL  ++K+E +    P I++ NALLN  I+    +   
Sbjct: 75  KCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAE 134

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
            F       G++ ++ TY +LI     +   ++A  L D M  K ++P V  Y  +I+G+
Sbjct: 135 SFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGM 194

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN-LQPN 223
                +V A  +F  M E G+VP++  YN ++DG+ K  D  +  E +  ++  + + PN
Sbjct: 195 VKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPN 254

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+ V+++GLCK+G    +   +  M K     ++F Y+ LI G C  GN+  A+ +  
Sbjct: 255 VVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYK 314

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM K  +  DV TYN L+ G C  G+++ +  L   M KE    NVV+YN  I G  +  
Sbjct: 315 EMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENR 373

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+A+SV   +  +G   +  T+  LI G CK G+++ A+ +  E        D   ++
Sbjct: 374 KVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYS 433

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +++DGLSK G + E L +  +M +     S    + LI+G  +  ++  A+ FF E   K
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK 493

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                CSP  V Y  +I  LC   +   A     +M   + +PD  TY+ ++ GL + K+
Sbjct: 494 G----CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +   + L   ++  G+ PD  ++ +++ G    G ++ A      +K+S
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQS 598



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 208/410 (50%), Gaps = 4/410 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I    +MG  +E+L ++   +K E    +   ++L+ GL   G  D   E Y
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVY 313

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EMV   +V DVVTY  L++  C  G + ++  L+  M+ K     VV Y I I GL   
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMMGKENCHNVVSYNIFIRGLFEN 372

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA S++  +R  G   +  TY  L+ G CK   +N+AL+   E      + +   +
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DGL K G +  A      M K+G   +  V N LI+G  +A  L EA+    EME 
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              SP V +YN LI GLC   +   A   +++M ++    +++TY+ L+DG C+   ++ 
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL++  Q+  KG+EP+V   + L+ G C AG I+ A+ LY+ M   + +P++V    L+D
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           GL K    +    ++  M +    P + + +  + GL   GRIS+ +  F
Sbjct: 613 GLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALF 662



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 207/406 (50%), Gaps = 12/406 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+LI    ++G+++ A+ VY+   K  V+  +   NALLNG  + GK    +E +   
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW--- 348

Query: 111 VLCGL--VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           V+ G     +VV+Y + I        V +A+++++ +  +G       Y +LIHGLC   
Sbjct: 349 VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVT 226
            + +A  + +  ++ G   + + Y++++DG  K   V+ AL   H+M  +   L P+V  
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L++G  +  +L  A  FF  M   G  P +  YN LI+G CKA    +A S   EM 
Sbjct: 469 --PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEML 526

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           + +  PD+ TY++L+ GLC   +++ A  L +++  +G+  +V  +N L+ G C  G +E
Sbjct: 527 EKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIE 586

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            AL + S M +    PN+VT ++L+DG  KA   + A  ++  M      PD++ +   +
Sbjct: 587 DALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITL 646

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            GL   G + + + L+ + L+  I P+  T   L+  + K G + +
Sbjct: 647 KGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 250/505 (49%), Gaps = 48/505 (9%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   F TLI  F + G ++ A  +++ +E   + P + A + L++G  K G      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + + +  G+  DVV +   ID     GD+  A  ++  M+ +GI P VV YTILI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + ++ EA  M+  + + G+ P++ TY++L+DG+CK  ++      Y +M+     P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +GVL+DGL K G +  A  F V M    +  N+ V+N LIDG C+     EA+ +   
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 285 MEKFEISPDVFTY-----------------------------------------NILIKG 303
           M  + I PDV T+                                         N++I  
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           L    ++E A      + +  +  ++VTYN++I GYC    +++A  +   +      PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            VT + LI   CK  ++D A+ +++ M  K   P+ V +  L+D  SK  +++ + +L++
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM E  I+PS+ + S +I GL K GR+  A N F +  D        P+ V YA +I+  
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK----LLPDVVAYAILIRGY 757

Query: 484 CYDGQILKASKLFSDMRSDNLRPDN 508
           C  G++++A+ L+  M  + ++PD+
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDD 782



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 272/585 (46%), Gaps = 52/585 (8%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLI 95
           FN L S+     +  V   L+      G +++AL ++    ++ V+    +   +LN LI
Sbjct: 133 FNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192

Query: 96  KKGKFDSVWEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALN-------------- 140
              + D + + ++++   G+  + V  +G ++D    +G+V KAL+              
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252

Query: 141 --------------------LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
                               L   ++D G  P VV +  LI+G C   +M  A  +F+ M
Sbjct: 253 VSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            + G+ P+L  Y+ L+DGY K   +    + + + LH  ++ +VV F   +D   K G+L
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   +  M   G+ PN+  Y  LI G C+ G ++EA  +  ++ K  + P + TY+ L
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I G C  G L     L + M K G   +VV Y  L+DG  K+G M  A+    +M  + +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI------DGLSKDGN 414
             NVV F+SLIDG C+    D A+ ++  M I  + PDV  FT ++      D   K  +
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK--H 550

Query: 415 MKET--LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           MK T  L+L+  M   KI+  +   + +IH LFK  RI +A  FF    +    G   P+
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE----GKMEPD 606

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I   C   ++ +A ++F  ++     P+  T T ++  L +   M   + + +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            M + G  P+AV    ++  + ++ D++ +F+  E ++E  I  S
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 239/521 (45%), Gaps = 46/521 (8%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            I +CN +L GL    + +        ++ CG   +VVT+  LI+  C +G++ +A +LF
Sbjct: 251 GIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  +GIEP ++ Y+ LI G      +     +F      GV  ++  +++ +D Y K 
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            D+  A   Y  ML   + PNVVT+ +L+ GLC+ G +  A   +  + K G+ P+I  Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + LIDG CK GNL    +L  +M K    PDV  Y +L+ GL   G +  A     KM  
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI------DGQCK 376
           + I  NVV +NSLIDG+C+    ++AL V   M   G++P+V TF++++      D  CK
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549

Query: 377 -----------------------------------AGNIDAAMGLYTEMVIKSLVPDVVV 401
                                                 I+ A   +  ++   + PD+V 
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  +I G      + E  R+++ +      P+  T++ LIH L KN  +  A+  F    
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           +K       PN V Y  ++        I  + KLF +M+   + P   +Y+ ++ GL + 
Sbjct: 670 EKGS----KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            R+ +   +    I   ++PD V   +++RGY + G L  A
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 265/596 (44%), Gaps = 66/596 (11%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKG 98
           FN L+S  +   N     T ++  S       AL  +R  E+     +   + + LI+ G
Sbjct: 55  FNLLDS-SVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNG 113

Query: 99  KFDSVWEFYEEMVLC--------------GLVADVVTYGVLIDCCCGQGDVMKALNL--- 141
            FD   + ++EM+                 L ADV  +  L++CCC  G V KAL +   
Sbjct: 114 MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVY 171

Query: 142 --------------------------------FDEMIDKGIEPT-VVIYTILIHGLCNEN 168
                                           FD++   GIEP+ V  +  ++  L  + 
Sbjct: 172 STQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG 231

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ +A    R + E G    + + N ++ G   V  +  A      +L     PNVVTF 
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L++G CK GE+  A + F  M + G+ P++  Y+ LIDG+ KAG L     L S+    
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            +  DV  ++  I      G L  A  + ++M  +GI  NVVTY  LI G C++G + +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  Q+ ++G+EP++VT+SSLIDG CK GN+ +   LY +M+     PDVV++  L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           LSK G M   +R   +ML   I  +V   +SLI G  +  R   AL  F     +  G Y
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-----RLMGIY 525

Query: 469 -CSPNHVLYAAIIQ------ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
              P+   +  +++      A C   +     +LF  M+ + +  D      ++  L + 
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
            R+ D      ++I+  + PD V    M+ GY     L  A R  E LK +  G +
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 57/106 (53%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L++   K    +  ++ +EEM   G+   +V+Y ++ID  C +G V +A N+F + ID  
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           + P VV Y ILI G C   ++VEA  ++  M   GV P+     AL
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 242/508 (47%), Gaps = 50/508 (9%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P     + ++  L +  K +  +  ++EM   G+  DV TY +LID  C  G + +A +
Sbjct: 285 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARS 344

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            FDEM   G    VV YT L+H      ++ +A  +F  M + G  PN  TY+AL+DG C
Sbjct: 345 WFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLC 404

Query: 201 KVADVNRALE---------------FYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAG 244
           K  ++ +A E               FY E  H + + PNVVT+G L+DGLCK  ++  A 
Sbjct: 405 KAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 464

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M   G  PN  +Y+ LIDG CK G +  A  +   M K    P V TY  LI  +
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
               +L+ A  +L +M +     NVVTY ++IDG C+ G+ +KAL + S M EKG  PNV
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+++LIDG  K+G +D ++ L+ +M  K   P+ V +  LI+     G + E   L  E
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644

Query: 425 M--------------------------------LEAKITPSVFTVSS-LIHGLFKNGRIS 451
           M                                LE+  T  +  V   LI    K GR+ 
Sbjct: 645 MKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLE 704

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL    E  + +     +    +Y ++IQALC   Q+ KA +L+S++    + P+   +
Sbjct: 705 EALELHKEMMELSSSLNITSKD-MYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVF 763

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGI 539
             +++GL++  +  + + L   +   G+
Sbjct: 764 VCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/533 (27%), Positives = 237/533 (44%), Gaps = 29/533 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           KF    F+    A  + G   +AL +  + +       C  +++GL++   FD    F  
Sbjct: 75  KFTVGCFAQ---ALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLH 131

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M     + +VVTY  L+     +  +     + + M+ +G  P   ++  L+H  CN  
Sbjct: 132 RMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNAR 191

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR------ALEFYHEMLHHNLQP 222
               A  + + M +CG  P    YN  +   C   ++        A + Y EML  +   
Sbjct: 192 DYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVL 251

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N V        LC +G+   A      M   G  P+   Y+ +I   C+A  + +A  L 
Sbjct: 252 NKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM+   ++PDV+TY ILI   C  G +E A     +M   G  ANVVTY +L+  Y K 
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV----------- 391
             + +A  + ++M + G  PN +T+S+L+DG CKAG I  A  +YT+++           
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFY 431

Query: 392 -----IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
                  S+ P+VV + ALIDGL K   + +   L   ML     P+     +LI G  K
Sbjct: 432 FEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G+I NA   FL     +  GY    H  Y ++I A+  D ++  A K+ S M   +  P
Sbjct: 492 VGKIDNAQEVFLR---MSKCGYLPTVHT-YTSLIDAMFKDRRLDLAMKVLSQMVESSCTP 547

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +  TYT M+ GL R       + LL+ M + G  P+ V    ++ G  ++G +
Sbjct: 548 NVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 231/548 (42%), Gaps = 66/548 (12%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+    NAL+  L   G+ D  +   +EM   G   D  T G      C +G    AL +
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            +    +  +   V+ T +I GL   +   EA S    MR    +PN+ TY  L+ G+ K
Sbjct: 98  IER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +       + M+     PN   F  L+   C   +   A      MA  G  P    
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214

Query: 262 YNCLIDGHCK------------AGNLFEAM-----------------SLCSEMEKFEIS- 291
           YN  I   C             A  ++E M                  LC  M KF+++ 
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCG-MGKFDMAF 273

Query: 292 ------------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
                       PD  TY+ +I  LC   ++E A  L Q+M   G+  +V TY  LID +
Sbjct: 274 QIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSF 333

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +E+A S   +M   G   NVVT+++L+    KA  +  A  ++  M+     P+ 
Sbjct: 334 CKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNT 393

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEML------------EAK----ITPSVFTVSSLIHG 443
           + ++AL+DGL K G +++   +Y +++            E K    I P+V T  +LI G
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDG 453

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K  ++ +A     E  D      C PNH++Y A+I   C  G+I  A ++F  M    
Sbjct: 454 LCKAHKVVDAQ----ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             P   TYT+++  + + +R+   M +L+ M++    P+ V    M+ G    G+ + A 
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 564 RCSEFLKE 571
           +    ++E
Sbjct: 570 KLLSMMEE 577



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 154/420 (36%), Gaps = 86/420 (20%)

Query: 240 LRAAGNFFVHMAK-----FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           LR A +   H A      FG  P+   YN L+     AG +     +  EM +     D 
Sbjct: 16  LRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDK 75

Query: 295 FTYNILIKGLCGVGQLEGA--------------------EGLLQ-KMYKEGI-------- 325
           FT     + LC  G+   A                     GL++  ++ E I        
Sbjct: 76  FTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRC 135

Query: 326 ---LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
              + NVVTY +L+ G+ K+  +     + + M ++G  PN   F+SL+   C A +   
Sbjct: 136 NSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPY 195

Query: 383 AMGL-----------------------------------------YTEMVIKSLVPDVVV 401
           A  L                                         Y EM+  S V + V 
Sbjct: 196 AYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVN 255

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
                  L   G      ++ K M+     P   T S +I  L +  ++  A   F E  
Sbjct: 256 TANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM- 314

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            K+ G   +P+   Y  +I + C  G I +A   F +MRS     +  TYT +L   L+A
Sbjct: 315 -KSVG--VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
           K++     +   MI  G  P+ +    +V G  + G+++ A  C  + K   IG+S+  G
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKA--CEVYTK--LIGTSDNVG 427


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/589 (28%), Positives = 281/589 (47%), Gaps = 49/589 (8%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLI 59
           F  +AN+ L+K+     + +   L    +   V Y     L  +++  F+ S  +F ++I
Sbjct: 63  FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY----LLQQMKLQGFHCSEDLFISVI 118

Query: 60  IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             + ++G  E A+ ++ +I+     P+++  N +L+ L+ + +   ++  Y +M   G  
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--------------------------- 149
            +V TY VL+   C    V  A  L  EM +KG                           
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238

Query: 150 ---IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
               EP V +Y  LI+GLC E+    A  + R M E G+ PN+ +Y+ L++  C    + 
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCL 265
            A  F  +ML     PN+ T   L+ G    G    A + +  M + FG+ PN+  YN L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           + G C  GN+ +A+S+ S ME+   SP++ TY  LI G    G L+GA  +  KM   G 
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVV Y ++++  C+    ++A S+   M+++   P+V TF++ I G C AG +D A  
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478

Query: 386 LYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           ++ +M  +    P++V +  L+DGL+K   ++E   L +E+    +  S  T ++L+HG 
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS--- 501
              G    AL   L      DG   SP+ +    II A C  G+  +A+++  D+ S   
Sbjct: 539 CNAGLPGIALQ--LVGKMMVDGK--SPDEITMNMIILAYCKQGKAERAAQML-DLVSCGR 593

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
              RPD  +YT ++ GL R+    D ++LL  MI  GIVP      V++
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 247/529 (46%), Gaps = 14/529 (2%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI--- 95
           F ++ +  + K  P  F  +I   +  G ++   ++ ++++ L        L   +I   
Sbjct: 63  FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK-LQGFHCSEDLFISVISVY 121

Query: 96  -KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            + G  +   E +  +   G    V  Y  ++D   G+  +     ++ +M   G EP V
Sbjct: 122 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y +L+  LC  NK+  A+ +   M   G  P+  +Y  ++   C+V  V    E    
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE---- 237

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
            L    +P V  +  L++GLCK  + + A      M + G+ PN+  Y+ LI+  C +G 
Sbjct: 238 -LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYN 333
           +  A S  ++M K    P+++T + L+KG    G    A  L  +M +  G+  NVV YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +L+ G+C  G++ KA+SV S M E G  PN+ T+ SLI+G  K G++D A+ ++ +M+  
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              P+VVV+T +++ L +    KE   L + M +    PSV T ++ I GL   GR+  A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              F +   +     C PN V Y  ++  L    +I +A  L  ++    +   + TY T
Sbjct: 477 EKVFRQMEQQHR---CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +L G   A      + L+  M+  G  PD +   +++  Y + G  + A
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 208/427 (48%), Gaps = 41/427 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++T+I +  E+G ++E   +  + E  P +   NAL+NGL K+  +   +E   EMV  G
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFE--PVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V++Y  LI+  C  G +  A +   +M+ +G  P +   + L+ G        +A 
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336

Query: 175 SMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            ++  M R  G+ PN+  YN L+ G+C   ++ +A+  +  M      PN+ T+G L++G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
             K G L  A   +  M   G  PN+ VY  +++  C+     EA SL   M K   +P 
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKALSVC 352
           V T+N  IKGLC  G+L+ AE + ++M ++     N+VTYN L+DG  K   +E+A  + 
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-------------------- 392
            ++  +GVE +  T+++L+ G C AG    A+ L  +M++                    
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576

Query: 393 -----------------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
                            +   PDV+ +T +I GL +    ++ + L + M+ A I PS+ 
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636

Query: 436 TVSSLIH 442
           T S LI+
Sbjct: 637 TWSVLIN 643



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 167/342 (48%), Gaps = 8/342 (2%)

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +VG    A   F  + +FG  P++ +YN ++D       +     +  +M++    P+VF
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN+L+K LC   +++GA+ LL +M  +G   + V+Y ++I   C+ G +++      ++
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----REL 238

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            E+  EP V  +++LI+G CK  +   A  L  EMV K + P+V+ ++ LI+ L   G +
Sbjct: 239 AER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +       +ML+    P+++T+SSL+ G F  G   +AL+ +        G    PN V 
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW---NQMIRGFGLQPNVVA 354

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++Q  C  G I+KA  +FS M      P+  TY +++ G  +   +   + +   M+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             G  P+ V+   MV     +   K A    E + +     S
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TL+  F   G+I +A+ V+  +E +   P I+   +L+NG  K+G  D     +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G   +VV Y  +++  C      +A +L + M  +   P+V  +   I GLC+ 
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470

Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            ++  AE +FR M ++    PN+ TYN L+DG  K   +  A     E+    ++ +  T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G C  G    A      M   G  P+    N +I  +CK G    A  +   + 
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590

Query: 287 --KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
             + +  PDV +Y  +I GLC     E    LL++M   GI+ ++ T++ LI+ +
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
           PSV  F+  I    + G ++ A  V+R++E      P I   N LL+GL K  + +  + 
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              E+ + G+     TY  L+   C  G    AL L  +M+  G  P  +   ++I   C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574

Query: 166 NENKMVEAESMFRSMRECG---VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            + K   A  M   +  CG     P++ +Y  ++ G C+       +     M+   + P
Sbjct: 575 KQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFV 248
           ++ T+ VL++       +RA   F +
Sbjct: 634 SIATWSVLINCFILDDIVRAHDQFTI 659



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 6/163 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+   ++   IEEA  + R+I    V  +    N LL+G    G      +  
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI--DKGIEPTVVIYTILIHGLC 165
            +M++ G   D +T  ++I   C QG   +A  + D +    +   P V+ YT +I GLC
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
             N   +   +   M   G+VP++ T++ L++ +  + D+ RA
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLINCFI-LDDIVRA 653


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 262/551 (47%), Gaps = 46/551 (8%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P V++T+I  F E+   E+AL  Y   +K+ V   +Q CN LL  L++  +       ++
Sbjct: 143 PQVYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKRLVEGNQIMYARSLFD 200

Query: 109 EMVLCGLVADVVTYGVLIDC-------------------------------------CCG 131
           +M   G   +V +Y VL+                                        C 
Sbjct: 201 DMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH 260

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
              V  A N    +  +G       +  +IHG C++ ++ +A  +F  M++CG VP++++
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHS 320

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y+ L+DG CK  DV        EM  + + PN+V++  L+ GLC+ G +  A   F  + 
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G   +  VY+ ++ G C+  +L     L ++M      PD + Y+ LI   C   QL+
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  + + M  +GI  NVVT   L+ G+  EG + +A     ++ + GV P++ T+  +I
Sbjct: 441 EALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVII 500

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK    +   G++ +M+ +  VPD V+++ +IDG  K  +++E  RLY +M++    
Sbjct: 501 HGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTK 560

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P++FT +SLI+GL  + ++   +  F        G   +P+ +LY ++I   C    +  
Sbjct: 561 PNIFTYTSLINGLCHDDKLPEVMTLFKHMI----GEGLAPDRILYTSLIACYCKRSNMKA 616

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A ++F +M ++ L  D+  YT ++ G  +   M    + + +M+  G+ P  V    ++ 
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIV 676

Query: 552 GYQENGDLKSA 562
           GY + GD K A
Sbjct: 677 GYFKIGDEKKA 687



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 228/461 (49%), Gaps = 9/461 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQAC-NALLNGLIKKGKFDSVWEF 106
           N + ++T +        ++ A W + ++      P    C NA+++G    G+     E 
Sbjct: 247 NAATYATYLYGLCHAKQVKSA-WNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEV 305

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           ++ M  CG V DV +Y +L+D  C QGDV+    +  EM   GI P +V Y+ L+HGLC 
Sbjct: 306 FDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCR 365

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++  A  +F+ +++ G   +   Y+ ++ G C+  D+    + +++M+HHN  P+   
Sbjct: 366 AGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYN 425

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+   C+  +L+ A   F  M   G+ PN+     L+ G    G + EA     ++ 
Sbjct: 426 YSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVR 485

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +F + P + TY ++I GLC V +     G+   M K G + + V Y+ +IDG+ K  D++
Sbjct: 486 QFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQ 545

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M ++G +PN+ T++SLI+G C    +   M L+  M+ + L PD +++T+LI
Sbjct: 546 EAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLI 605

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
               K  NMK  L +++EM    ++   F  + LI G  K   +  A  F  E  +K   
Sbjct: 606 ACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKG-- 663

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
              +P  V Y  +I      G   KA  +++ M    + PD
Sbjct: 664 --LTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 200/430 (46%), Gaps = 45/430 (10%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  + E    G+E  V     L+  L   N+++ A S+F  M+  G  PN+Y+Y+ LM 
Sbjct: 162 ALVTYVEAKKVGVELQVC--NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMS 219

Query: 198 GYCKVADVNRALEFYHEMLH--HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            Y   A +                ++PN  T+   + GLC   ++++A NF   + + G 
Sbjct: 220 MYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRG- 278

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
                 Y C                            + + +N +I G C  GQ+  A  
Sbjct: 279 ------YPC----------------------------NNYCFNAVIHGFCHDGQVHKAIE 304

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M K G + +V +Y+ L+DG CK+GD+     +  +M   G+ PN+V++SSL+ G C
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +AG ++ A  L+  +  +    D +V++ ++ G  +  +++    L+ +M+     P  +
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424

Query: 436 TVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             SSLI+   ++ ++  AL  F L  +D    G C PN V    ++     +G I +A  
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSD----GIC-PNVVTCTILVHGFSNEGLIGEAFL 479

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
               +R   + P  CTY  ++ GL +  +  D+  + ADMIK G VPD V+  +++ G+ 
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 555 ENGDLKSAFR 564
           +  DL+ AFR
Sbjct: 540 KALDLQEAFR 549



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 8/244 (3%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y ++I  + +    E AL    +  + GVE  V  F  L+    +   I  A  L+ +M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKRLVEGNQIMYARSLFDDM 202

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA--KITPSVFTVSSLIHGLFKNG 448
                 P+V  ++ L+   +    +     L          + P+  T ++ ++GL    
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           ++ +A NF      +   GY   N+  + A+I   C+DGQ+ KA ++F  M+     PD 
Sbjct: 263 QVKSAWNFLQMLCQR---GYPCNNYC-FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDV 318

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            +Y+ ++ GL +   +L    +L +M + GI P+ V    ++ G    G ++ AF   + 
Sbjct: 319 HSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKR 378

Query: 569 LKES 572
           LK+ 
Sbjct: 379 LKDQ 382


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 270/554 (48%), Gaps = 46/554 (8%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIK---KGKFD 101
           P  + ++F   + A+   G    AL +++K   +++ P +  CN LL GL++        
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTIL 160
           S  E +++MV  G+  +V T+ VL++  C +G +  AL + + M+ +  + P  V Y  +
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           +  +  + ++ + + +   M++ G+VPN  TYN L+ GYCK+  +  A +    M   N+
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            P++ T+ +L++GLC  G +R        M    + P++  YN LIDG  + G   EA  
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGY 339
           L  +ME   +  +  T+NI +K LC   + E     ++++    G   ++VTY++LI  Y
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            K GD+  AL +  +M +KG++ N +T ++++D  CK   +D A  L      +  + D 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V +  LI G  ++  +++ L ++ EM + KITP+V T +SLI GL  +G+   A+    E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM----E 542

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN----------- 508
           K D+       P+   + +II   C +G++ KA + +++    + +PDN           
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602

Query: 509 -----------------------CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
                                   TY TM+    + K++ +   LL++M + G+ PD   
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662

Query: 546 NQVMVRGYQENGDL 559
               +    E+G L
Sbjct: 663 YNSFISLLMEDGKL 676



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 225/490 (45%), Gaps = 64/490 (13%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+  + ++G ++EA  +    ++  VLP +   N L+NGL   G      E  
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M    L  DVVTY  LID C   G  ++A  L ++M + G++   V + I +  LC E
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE 393

Query: 168 NKMVEAESMFRSMREC----GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            K    E++ R ++E     G  P++ TY+ L+  Y KV D++ ALE   EM    ++ N
Sbjct: 394 EK---REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            +T   ++D LCK  +L  A N      K G   +   Y  LI G  +   + +A+ +  
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM+K +I+P V T+N LI GLC  G+ E A     ++ + G+L +  T+NS+I GYCKEG
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570

Query: 344 DMEKALS-----------------------VCSQ-MTEKGV----------EPNVVTFSS 369
            +EKA                         +C + MTEK +          E + VT+++
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I   CK   +  A  L +EM  K L PD   + + I  L +DG + ET  L K+     
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK----- 685

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH--VLYAAIIQALCYDG 487
                        G F  G +   L    EK   T       N   + Y+ +I  LC  G
Sbjct: 686 -----------FSGKF--GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732

Query: 488 QILKASKLFS 497
           ++ + S+ ++
Sbjct: 733 RLKEHSRSYT 742



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 18/344 (5%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F+P +  + TLI A+ ++G +  AL + R++    +       N +L+ L K+ K D   
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
                    G + D VTYG LI     +  V KAL ++DEM    I PTV  +  LI GL
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C+  K   A   F  + E G++P+  T+N+++ GYCK   V +A EFY+E + H+ +P+ 
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            T  +L++GLCK G    A NFF  + +      +  YN +I   CK   L EA  L SE
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSE 650

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME+  + PD FTYN  I  L   G+L   + LL+K            ++       ++  
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK------------FSGKFGSMKRDLQ 698

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           +E   +  +  +++ +    + +S +ID  C  G +      YT
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 11/314 (3%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ---LEGA 313
           P+  +++  +  +   G    A+ +  +M + ++ P++ T N L+ GL        +  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLID 372
             +   M K G+  NV T+N L++GYC EG +E AL +  +M +E  V P+ VT+++++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
              K G +     L  +M    LVP+ V +  L+ G  K G++KE  ++ + M +  + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD-GQILK 491
            + T + LI+GL   G +       LE  D        P+ V Y  +I   C++ G  L+
Sbjct: 309 DLCTYNILINGLCNAGSMREG----LELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLE 363

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM-GIVPDAVINQVMV 550
           A KL   M +D ++ +  T+   L+ L + ++   V   + +++ M G  PD V    ++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 551 RGYQENGDLKSAFR 564
           + Y + GDL  A  
Sbjct: 424 KAYLKVGDLSGALE 437



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 12/202 (5%)

Query: 381 DAAMGLYTEMVIKSL----VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           DA++ L   ++  +L     P   +F   +     +G     L+++++M+  K+ P++ T
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLT 168

Query: 437 VSSLIHGLFK---NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            ++L+ GL +   +  IS+A   F    D    G  S N   +  ++   C +G++  A 
Sbjct: 169 CNTLLIGLVRYPSSFSISSAREVF---DDMVKIG-VSLNVQTFNVLVNGYCLEGKLEDAL 224

Query: 494 KLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +   M S+  + PDN TY T+L+ + +  R+ D+  LL DM K G+VP+ V    +V G
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
           Y + G LK AF+  E +K++ +
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNV 306


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 257/541 (47%), Gaps = 36/541 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++TL+  +   GH++ A  +   + V P       L+  L  +G+        ++M+  
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   +VVTY VL++  C      +A+ + DEM  KG  P +V Y ++I+G+C E ++ +A
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +   +   G  P+  +Y  L+ G C     +   E + EM+  N  PN VTF +L+  
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C+ G +  A      M + G   N  + N +I+  CK G + +A  L ++M  +  +PD
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             +Y  ++KGLC   + + A+ LL +M +     N VT+N+ I   C++G +E+A+ +  
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412

Query: 354 QMTEKG--------------------------------VEPNVVTFSSLIDGQCKAGNID 381
           QM+E G                                 +PN +T+++L+ G C A  +D
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLD 472

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L  EM+     P+VV F  L+    + G ++E + L ++M+E   TP++ T ++L+
Sbjct: 473 GAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLL 532

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G+ K+    +AL        K      SP+ + +++II  L  + +I +A +LF  ++ 
Sbjct: 533 DGITKDCSSEDALELLHGLVSKG----VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQD 588

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             +RP    Y  +L GL +   + + +   A M+  G +P+     +++ G    G LK 
Sbjct: 589 IGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 648

Query: 562 A 562
           A
Sbjct: 649 A 649



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 229/450 (50%), Gaps = 10/450 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I      G +++A  +  ++      P   +   LL GL    ++D V E +
Sbjct: 212 NIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELF 271

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM+    + + VT+ +LI   C  G V +A+ + ++M + G      +  I+I+ +C +
Sbjct: 272 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQ 331

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A  +   M   G  P+  +Y  ++ G C+    + A E  +EM+ +N  PN VTF
Sbjct: 332 GRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              +  LC+ G +  A      M++ G    +  YN L++G C  G++  A+ L   M  
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP- 450

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+  TY  L+ GLC   +L+GA  L+ +M +     NVVT+N L+  +C++G +E+
Sbjct: 451 --CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  QM E G  PN++T+++L+DG  K  + + A+ L   +V K + PDV+ F+++I 
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            LSK+  ++E ++L+  + +  + P     + ++ GL K   I NA++FF          
Sbjct: 569 ILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNG--- 625

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFS 497
            C PN   Y  +I+ L ++G + +A  L S
Sbjct: 626 -CMPNESTYIILIEGLAHEGLLKEAQDLLS 654



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 224/506 (44%), Gaps = 11/506 (2%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-GLVADVVTYGVL 125
           H+        + E   A    +A L  LI +          E    C G   DV     L
Sbjct: 23  HLAAPAAATTRPESPNAPNPASAHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKL 82

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C +G    A  +       G    V  Y  L+ G C    +  A  +  SM    V
Sbjct: 83  IRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PV 139

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P+ YTY  L+   C    V  AL    +ML    QPNVVT+ VL++ +C+      A  
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M   G  PNI  YN +I+G C+ G + +A  L + +  +   PD  +Y  L+KGLC
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
              + +  E L  +M ++  + N VT++ LI  +C+ G +E+A+ V  QMTE G   N  
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             + +I+  CK G +D A  L  +M      PD + +T ++ GL +     +   L  EM
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +     P+  T ++ I  L + G I  A+    + ++      C+   V Y A++   C 
Sbjct: 380 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG----CTVGVVTYNALVNGFCV 435

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G I  A +LF   RS   +P+  TYTT+L GL  A+R+     L+A+M++    P+ V 
Sbjct: 436 QGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
             V+V  + + G L+ A    E + E
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMME 518



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 8/280 (2%)

Query: 301 IKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           ++ L     L GA  L+++    +G   +V     LI   C+ G    A  V       G
Sbjct: 47  LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
              +V  +++L+ G C+ G++DAA  L   M +    PD   +T LI  L   G + + L
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADAL 163

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L  +ML     P+V T + L+  + +N     A+       D+     C+PN V Y  I
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVL----DEMRAKGCTPNIVTYNVI 219

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  +C +G++  A +L + + S   +PD  +YTT+L+GL  +KR  DV  L A+M++   
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           +P+ V   +++R +   G ++ A +  E + E    ++ T
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 256/539 (47%), Gaps = 55/539 (10%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P +  C+++L G  + GK       + EM   GL  + V+Y  +I+     G VM+A 
Sbjct: 6   IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 65

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           NL  +M+ +GI   +V  T ++ GL    K  EAE +F ++ +  + PN  TY+AL+DGY
Sbjct: 66  NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 125

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+  +  A     +M   ++ PNV+TF  +++G  K G L  A +    M +  V PN 
Sbjct: 126 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 185

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            VY  LIDG+ KAG    A   C EM+   +      ++IL+  L  VG+++ A  L+  
Sbjct: 186 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 245

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           MY +GI  ++V Y SLIDGY KEG+   ALS+  +M EK +  +VV +++LI G  + G 
Sbjct: 246 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 305

Query: 380 IDA--------------------AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            D                     A+ +  EM    ++P+ V +  LI GL K G +++  
Sbjct: 306 YDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 365

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGR-----------ISNALNFFLEKTDKTDGGY 468
               EML  +  P+  T   L+    ++ +           +++ L   L   +     +
Sbjct: 366 SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVF 425

Query: 469 C--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           C                    S + V Y A+I+  C    + KA K +S M  D + P+ 
Sbjct: 426 CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNI 485

Query: 509 CTYTTMLRGL----LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            TY T+L GL    L  + M +   L+++M + G+VP+A    ++V GY   G+ K   
Sbjct: 486 TTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI 544



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 207/428 (48%), Gaps = 19/428 (4%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           MI  GI P VV  + +++G C   K+ EA  +FR M E G+ PN  +Y  +++   K   
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V  A     +M+   +  ++VT   +MDGL KVG+ + A   F  + K  + PN   Y+ 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DG+CK G +  A  +  +MEK  + P+V T++ +I G    G L  A  +L++M +  
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           ++ N + Y  LIDGY K G+ + A   C +M  + +E + V F  L++   + G +D A 
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  +M  K + PD+V + +LIDG  K+GN    L + +EM E  I   V   ++LI GL
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            + G+                     P +V    I   L  D +   A  + ++M+S  +
Sbjct: 301 LRLGKY-------------------DPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGI 341

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P+  TY  ++ GL +   +      L +M+ M  VP  + ++ +V+ Y  +       +
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401

Query: 565 CSEFLKES 572
             E L  S
Sbjct: 402 IHEKLVAS 409



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 240/499 (48%), Gaps = 37/499 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S L+  + ++G +E A  V +K+E   V P +   ++++NG  KKG      +  
Sbjct: 114 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 173

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV   ++ + + Y +LID     G+   A +   EM  + +E + VI+ IL++ L   
Sbjct: 174 REMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 233

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EA S+   M   G+ P++  Y +L+DGY K  +   AL    EM   N++ +VV +
Sbjct: 234 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 293

Query: 228 GVLMDGLCKVG--------------------ELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
             L+ GL ++G                    +   A +    M  +G+ PN   YN LI 
Sbjct: 294 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIG 353

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ---KMYKEG 324
           G CK G + +A S   EM   E  P   T+  L+K      + E A+ +LQ   K+   G
Sbjct: 354 GLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY---SRSEKADKILQIHEKLVASG 410

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  ++  YN+LI  +C+ G   KA  V  +M ++G+  ++VT+++LI G C   +++ A+
Sbjct: 411 LELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL 470

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDG----NMKETLRLYKEMLEAKITPSVFTVSSL 440
             Y++M +  + P++  +  L+ GLS  G     M+ET +L  EM E  + P+  T   L
Sbjct: 471 KTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDIL 530

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G    GR+ N     +   +    G+  P    Y  +I      G++++A +L +D+ 
Sbjct: 531 VSGY---GRVGNRKKTIILHIEMITKGFV-PTLKTYNVLISDYAKSGKMIEARELLNDLL 586

Query: 501 SDNLRPDNCTYTTMLRGLL 519
           +    P++ TY  +  G L
Sbjct: 587 TKGRIPNSFTYDILTCGWL 605



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 229/475 (48%), Gaps = 24/475 (5%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M++ G++ DVVT   ++   C  G + +A  LF EM + G++P  V Y  +I+ L    +
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           ++EA ++   M   G+  ++ T   +MDG  KV     A E +  +L  NL PN VT+  
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DG CK+G++  A      M K  V PN+  ++ +I+G+ K G L +A+ +  EM +  
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+   Y ILI G    G+ + A+   ++M    +  + V ++ L++   + G M++A 
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID-- 407
           S+   M  KG++P++V ++SLIDG  K GN  AA+ +  EM  K++  DVV + ALI   
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 408 ------------------GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
                             GL+ D   ++ L +  EM    I P+  T + LI GL K G 
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A +      D+       P  + +  +++A     +  K  ++   + +  L     
Sbjct: 361 VEKAESAL----DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLT 416

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            Y T++    R        ++L +M+K GI  D V    ++RGY     ++ A +
Sbjct: 417 VYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 471



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKG----KFDSVWEFY 107
           ++ LI  +    H+E+AL  Y ++    + P I   N LL GL   G      +   +  
Sbjct: 453 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 512

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GLV +  TY +L+      G+  K + L  EMI KG  PT+  Y +LI      
Sbjct: 513 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 572

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA---DVNRALEFYHEM 215
            KM+EA  +   +   G +PN +TY+ L  G+  ++   +++R+L+  +E+
Sbjct: 573 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEI 623


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 243/482 (50%), Gaps = 7/482 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   + LL  +++ G + +    + ++   G+   + T  +LI+C C Q  +  A +L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR-SMRECGVVPNLYTYNALMDGYC 200
              ++  G +P +V +  LI+G C  N MV     FR  +   G   + ++Y +L++G C
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFC-INGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K      AL+   +M    ++PN++T+  ++DGLCK   +  A   F  +   G+  ++ 
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LI G C  G   EA  L + M +  I+PD +T+NIL+  LC  G++  A+G+   M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K G   ++VTYN+L++G+C   ++ +A  + ++M ++G+EP+V+ ++ LI+G CK   +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D AM L+ E+  K+LVP++  + +LIDGL K G M     L  EM +   +P + T +  
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +    K+     A++ F +           P+  +Y  I++  C   ++  A +    + 
Sbjct: 412 LDAFCKSKPYEKAISLFRQIVQGI-----WPDFYMYDVIVENFCKGEKLKIAEEALQHLL 466

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                P+  TYT M+  L +     + M LL+ M      PDAV  + ++   QE  +  
Sbjct: 467 IHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETD 526

Query: 561 SA 562
            A
Sbjct: 527 KA 528



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 232/468 (49%), Gaps = 13/468 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALL 91
           S+F+ L+S  I    PS+   + LI  +    H+  A   L    K+   P +   N L+
Sbjct: 76  SLFSQLHSKGI---TPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLI 132

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           NG    G       F  +++  G   D  +YG LI+  C  G    AL L  +M +  + 
Sbjct: 133 NGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVR 192

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P ++ Y+ +I GLC +  + +A  +F  +   G++ ++  YN+L+ G C V     A   
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M+  N+ P+  TF +L+D LCK G +  A   F  M K G  P+I  YN L++G C 
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           + N+ EA  L + M K  + PDV  YN+LI G C +  ++ A  L +++  + ++ N+ T
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLAT 372

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YNSLIDG CK G M     +  +M ++G  P++VT++  +D  CK+   + A+ L+ + +
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ-I 431

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           ++ + PD  ++  +++   K   +K      + +L     P+V T + +I+ L K+    
Sbjct: 432 VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            A+   L K D  D   C P+ V +  II AL    +  KA KL  +M
Sbjct: 492 EAMT-LLSKMDDND---CPPDAVTFETIIGALQERNETDKAEKLRLEM 535



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 188/376 (50%), Gaps = 4/376 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           + +LI    + G   +AL + +K+E   V P +   + +++GL K          +  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G++ DVV Y  LI  CC  G   +A  L   M+   I P    + IL+  LC E ++V
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +F  M + G  P++ TYNALM+G+C   +V+ A E ++ M+   L+P+V+ + VL+
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G CK+  +  A   F  +    + PN+  YN LIDG CK G +     L  EM     S
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TYNI +   C     E A  L +++  +GI  +   Y+ +++ +CK   ++ A   
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +   G  PNV T++ +I+  CK  + D AM L ++M      PD V F  +I  L +
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQE 521

Query: 412 DGNMKETLRLYKEMLE 427
                +  +L  EM+E
Sbjct: 522 RNETDKAEKLRLEMIE 537



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 200/421 (47%), Gaps = 5/421 (1%)

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F+ M+ K   P + ++  L+  +        A S+F  +   G+ P++ T   L++ YC 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            A ++ A      +L    QPN+VTF  L++G C  G +  A  F + +   G   + F 
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI+G CK G   +A+ L  +ME+  + P++ TY+ +I GLC    +  A  L   + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GIL +VV YNSLI G C  G   +A  + + M    + P+  TF+ L+D  CK G I 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A G++  M+ +   PD+V + AL++G     N+ E   L+  M++  + P V   + LI
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  K   +  A+  F E   K       PN   Y ++I  LC  G++    +L  +M  
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKN----LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  TY   L    ++K     + L   +++ GI PD  +  V+V  + +   LK 
Sbjct: 399 RGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKI 457

Query: 562 A 562
           A
Sbjct: 458 A 458



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 188/356 (52%), Gaps = 4/356 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           ++ + N   +ST+I    +   I +AL ++  +    +L  + A N+L++G    G++  
Sbjct: 189 DLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWRE 248

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                  MV   +  D  T+ +L+D  C +G +++A  +F  M+ +G +P +V Y  L+ 
Sbjct: 249 ATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALME 308

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C  N + EA  +F  M + G+ P++  YN L++GYCK+  V+ A+  + E+   NL P
Sbjct: 309 GFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVP 368

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N+ T+  L+DGLCK+G +         M   G  P+I  YN  +D  CK+    +A+SL 
Sbjct: 369 NLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF 428

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            ++ +  I PD + Y+++++  C   +L+ AE  LQ +   G   NV TY  +I+  CK+
Sbjct: 429 RQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKD 487

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
              ++A+++ S+M +    P+ VTF ++I    +    D A  L  EM+ + LV D
Sbjct: 488 CSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   V+  L  ++ ML  +  P +  F  L+  + ++G    A + F  +   G+ P+I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
               LI+ +C   +L  A SL   + K    P++ T+N LI G C  G +  A      +
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +  +Y SLI+G CK G    AL +  +M E  V PN++T+S++IDG CK   I
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ L++ +  + ++ DVV + +LI G    G  +E  RL   M+   I P  +T + L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +  L K GRI  A   F     + +     P+ V Y A+++  C    + +A +LF+ M 
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGE----KPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              L PD   Y  ++ G  +   + + M+L  ++    +VP+      ++ G
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%)

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M  K   P +  F  L+    + G+   A+ L++++  K + P +   T LI+     
Sbjct: 44  NRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQ 103

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
            ++     L   +L+    P++ T ++LI+G   NG +S A+ F L+   K   GY   +
Sbjct: 104 AHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK---GY-PLD 159

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y ++I  LC +GQ   A +L   M  D +RP+  TY+T++ GL + + + D + L +
Sbjct: 160 EFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS 219

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +   GI+ D V    ++ G    G  + A R
Sbjct: 220 LVTSRGILVDVVAYNSLIHGCCSVGQWREATR 251


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 263/546 (48%), Gaps = 21/546 (3%)

Query: 40  NALNSLEIPKFNPSVFST----------LIIAFSEMGHIEEALWVYRKI---EVLPAIQA 86
           N  + L  P  + S FST           + +   +  ++ AL  Y K+   +  P ++ 
Sbjct: 21  NPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTMKPFPCVKD 80

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            N L   + K   + +     + M   G+  +V T+ ++I+C C     +   ++   M 
Sbjct: 81  FNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMF 140

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             G+EP++V +T +++GLC E  + +A      +++ G   + YT  A+++G CKV   +
Sbjct: 141 KIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSS 200

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            AL +  +M   N   +V  +  ++DGLCK G +  A + F  M   G+ P++F YNCLI
Sbjct: 201 AALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLI 260

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C      EA  L + M +  I PDV T+N++       G +  A+ +   M   GI 
Sbjct: 261 HGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIE 320

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +VVTY+S+I  +C    M+ A+ V   M  KG  PN+VT++SLI G C+  N++ AM  
Sbjct: 321 HDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYF 380

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EMV   L P++V +  LI G  K G       L+  M +    P + T + ++ GLFK
Sbjct: 381 LGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 440

Query: 447 NGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
               S A++ F  LEK +         + ++Y+ I+  +C  G++  A +LFS + S  +
Sbjct: 441 CHFHSEAMSLFRELEKMNS------DLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGV 494

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + D  TY  M+ GL +   + D   LL  M + G  PD     V V+G     ++  + +
Sbjct: 495 KIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTK 554

Query: 565 CSEFLK 570
              F+K
Sbjct: 555 YLMFMK 560



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 234/479 (48%), Gaps = 26/479 (5%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV------ 54
           +F ++A  K Y  A  LIK ++   +K   P H    V N L  L    F  SV      
Sbjct: 84  LFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNI--VINCLCRLNHTVFGFSVLGLMFK 141

Query: 55  ---------FSTLIIAFSEMGHIEEALWVYRKIEVLPAI------QACNALLNGLIKKGK 99
                    F+T++      G++ +A+   R ++ L  +          A++NGL K G 
Sbjct: 142 IGVEPSIVTFTTIVNGLCVEGNVAQAI---RFVDHLKDMGYESDRYTRGAIINGLCKVGH 198

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
             +   + ++M       DV  Y  ++D  C  G V +A +LF +M  KGI+P +  Y  
Sbjct: 199 SSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNC 258

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LIHGLCN ++  EA  +  +M   G++P++ T+N +   + K   ++RA   +  M H  
Sbjct: 259 LIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMG 318

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++ +VVT+  ++   C + +++ A   F  M + G  PNI  Y  LI G C+  N+ +AM
Sbjct: 319 IEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAM 378

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
               EM    + P++ T+N LI G C  G+   A+ L   M+K G L ++ T   ++DG 
Sbjct: 379 YFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGL 438

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            K     +A+S+  ++ +   + +++ +S +++G C +G ++ A+ L++ +  K +  DV
Sbjct: 439 FKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDV 498

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           V +  +I+GL K+G + +   L  +M E    P   T +  + GL +   IS +  + +
Sbjct: 499 VTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLM 557



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 202/437 (46%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ + +M+     P V  + +L   +        A S+ + M   GV PN+ T+N +++
Sbjct: 62  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C++            M    ++P++VTF  +++GLC  G +  A  F  H+   G   
Sbjct: 122 CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 181

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           + +    +I+G CK G+   A+S   +ME+   + DV  YN ++ GLC  G +  A  L 
Sbjct: 182 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLF 241

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYN LI G C     ++A  + + M  KG+ P+V TF+ +     K 
Sbjct: 242 SQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKT 301

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  +++ M    +  DVV ++++I        MK+ + ++  M+     P++ T 
Sbjct: 302 GMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTY 361

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SLIHG  +   ++ A+ F  E  +        PN V +  +I   C  G+ + A +LF 
Sbjct: 362 TSLIHGWCEIKNMNKAMYFLGEMVNNG----LDPNIVTWNTLIGGFCKAGKPVAAKELFF 417

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M      PD  T   +L GL +     + M L  ++ KM    D +I  +++ G   +G
Sbjct: 418 VMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSG 477

Query: 558 DLKSAFRCSEFLKESRI 574
            L  A     +L    +
Sbjct: 478 KLNDALELFSYLSSKGV 494



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 142/293 (48%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P +Q  N +    +K G        +  M   G+  DVVTY  +I   C    +  A+
Sbjct: 284 IMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAM 343

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +FD MI KG  P +V YT LIHG C    M +A      M   G+ PN+ T+N L+ G+
Sbjct: 344 EVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGF 403

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK      A E +  M  H   P++ T  +++DGL K      A + F  + K     +I
Sbjct: 404 CKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDI 463

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            +Y+ +++G C +G L +A+ L S +    +  DV TYNI+I GLC  G L+ AE LL K
Sbjct: 464 IIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMK 523

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           M + G   +  TYN  + G  +  ++ K+      M  KG   N  T   LI+
Sbjct: 524 MEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 576



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 51  NPSVFSTLIIAFSEMGH---IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  F + G     +E  +V  K   LP +Q C  +L+GL K          +
Sbjct: 392 NIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLF 451

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+       D++ Y ++++  C  G +  AL LF  +  KG++  VV Y I+I+GLC E
Sbjct: 452 RELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKE 511

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +AE +   M E G  P+  TYN  + G  +  +++++ ++   M     + N  T 
Sbjct: 512 GLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTT 571

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKF 253
            +L++      E RA   F V + KF
Sbjct: 572 KLLINYFSANKENRA---FQVFLQKF 594


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 270/549 (49%), Gaps = 48/549 (8%)

Query: 31  PHHVCYSVFNALNSLEIPKF--NPSV------FSTLIIAFSEMGHIEEALWVYRKIEVL- 81
           P  + +SV  +L++L+ P F  NPS+      F +   +F    ++++AL+ + ++  + 
Sbjct: 4   PTRLRFSV--SLSTLKFPSFLPNPSLPKLHSHFHSRPPSFE---NVDDALFQFHRMLCMR 58

Query: 82  --PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P I   N +L+   K   + +V      + L  +  D  T  +LI+C C  G +  A 
Sbjct: 59  HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           ++  +++  G +P  V  T LI GLC + ++ +A      +   G   +  +Y  L++G 
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+ +   A++    +     +PNVV +  ++D LCK   +  A N F  M+  G+  N+
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANV 238

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y+ +I G C  G L EA+   +EM    I+PDV+ YN L+  L   G+++ A+ +L  
Sbjct: 239 VTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAV 298

Query: 320 MYKEGILANVVTYNSLIDGY---------------------------CKEGDMEKALSVC 352
           + K  +  NV+TYN+LIDGY                           CK   +E+AL++ 
Sbjct: 299 IVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLY 358

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M +K + PN VT++SLIDG CK+G I  A  L  EM  +    +V+ + +LI+GL K+
Sbjct: 359 KEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKN 418

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF-KNGRISNALNFFLEKTDKTDGGYCSP 471
           G + + + L  +M +  I P ++T++ L+HGL  K  R+ NA   F    D  D GY  P
Sbjct: 419 GQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLF---QDLLDKGY-HP 474

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N   Y  II   C +G + +A  L S M      P+  T+  ++  LL          LL
Sbjct: 475 NVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLL 534

Query: 532 ADMIKMGIV 540
            +MI  G++
Sbjct: 535 CEMIARGLL 543



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 203/446 (45%), Gaps = 59/446 (13%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P +  +N ++D + K+      +     +    +QP+  T  +L++  C +G++  A +
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               + K+G  P+      LI G C  G + +A+    ++       D  +Y  LI G+C
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G+   A  LL+++       NVV YN++ID  CK   + +A ++ S+M+ KG+  NVV
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+S++I G C  G +  A+G   EMV+K++ PDV ++  L+D L K+G +KE   +   +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299

Query: 426 LEAKITPSVFTVSSLIHG---------------------------LFKNGRISNALNFFL 458
           ++  + P+V T ++LI G                           L K  R+  ALN + 
Sbjct: 300 VKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYK 359

Query: 459 EKTDKT-----------DGGYCSPNHVLYA--------------------AIIQALCYDG 487
           E   K              G C    + YA                    ++I  LC +G
Sbjct: 360 EMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNG 419

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVIN 546
           Q+ KA  L + M+   ++PD  T   +L GLL + KR+ +   L  D++  G  P+    
Sbjct: 420 QLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTY 479

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKES 572
            +++ G+ + G L  A+     +++S
Sbjct: 480 NIIIYGHCKEGLLDEAYALQSKMEDS 505


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 216/403 (53%), Gaps = 20/403 (4%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A + +++GL K G+ D      ++M   G+  + + Y  L+DC   Q D  +   + + M
Sbjct: 133 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 192

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            ++GIE TV  YTIL+  L     + + E++F  M+   VV ++Y Y A+++ YC+  ++
Sbjct: 193 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 252

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            RA +   E + + ++PN  T+GVL+ G CK+G++ AA      M   GV  N  ++N +
Sbjct: 253 RRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 312

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+ G + +A+ + + MEK  +  +++TYN L  GLC                + G+
Sbjct: 313 IDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLC----------------RMGV 356

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
           + N VTY +LI  +CK+GDM +A  +  +M EKG  P+V+T+S +I G  K G I  A  
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM  K  VPDV  + +L+ G   +G +   L+L++EM +    P+V   ++LI GL 
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           K GR   A   +    D    G   P+  LY+A++ +L  D +
Sbjct: 477 KEGRSEAAFQLY---DDMLKAGLI-PDDSLYSALVGSLHTDNR 515



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 206/393 (52%), Gaps = 20/393 (5%)

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           ++++ GLC   ++ +A  +   M   GV  N   YN+L+D Y +  D  R  E    M +
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++  V T+ +L+D L    ++      F  M    V  ++++Y  +I+ +C+AGN+  
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  E     + P+  TY +LIKG C +GQ+E AE LL  M  +G+  N + +N++ID
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           GYC++G ++ AL + + M + GVE N+ T+++L  G C+ G                +VP
Sbjct: 315 GYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMG----------------VVP 358

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           + V +T LI    KDG+M E  RL++EM E   TPSV T S +IHG  K GRI  A  F 
Sbjct: 359 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFR 418

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   K   G+  P+   YA+++   C +G++  A KLF +M+     P+   YT ++ G
Sbjct: 419 KEMEKK---GFV-PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 474

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           L +  R      L  DM+K G++PD  +   +V
Sbjct: 475 LAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 176/347 (50%), Gaps = 16/347 (4%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++E L +     +   +     L++ L        V   + EM    +V DV  Y  +
Sbjct: 183 GRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAV 242

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+  C  G++ +A  + DE +  G+EP    Y +LI G C   +M  AE +   M+  GV
Sbjct: 243 INAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGV 302

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             N   +N ++DGYC+   V+ AL+    M    ++ N+ T+  L  GLC++        
Sbjct: 303 GLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRM-------- 354

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
                   GV PN   Y  LI  HCK G++ EA  L  EM +   +P V TY+++I G  
Sbjct: 355 --------GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYA 406

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G++  AE   ++M K+G + +V TY SL+ G+C  G ++ AL +  +M ++G EPNVV
Sbjct: 407 KKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 466

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +++LI G  K G  +AA  LY +M+   L+PD  +++AL+  L  D
Sbjct: 467 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTD 513



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 20/343 (5%)

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           V++DGLCK G +  A      M + GV  N   YN L+D + +  +      +   ME  
Sbjct: 136 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 195

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I   V TY IL+  L     +   E L  +M    ++ +V  Y ++I+ YC+ G+M +A
Sbjct: 196 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 255

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V  +    GVEPN  T+  LI G CK G ++AA  L  +M  + +  + ++F  +IDG
Sbjct: 256 AKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 315

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             + G + + L++   M +  +  +++T ++L  GL + G +                  
Sbjct: 316 YCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVV------------------ 357

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN+V Y  +I   C DG +++A +LF +M      P   TY+ M+ G  +  R+ +  
Sbjct: 358 --PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAE 415

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
               +M K G VPD      +V G+  NG +  A +  E +K+
Sbjct: 416 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 458



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
            PSV  +S +I  +++ G I EA    +++E    +P +    +L++G    GK D   +
Sbjct: 392 TPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALK 451

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   G   +VV Y  LI     +G    A  L+D+M+  G+ P   +Y+ L+  L 
Sbjct: 452 LFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 511

Query: 166 NENK 169
            +N+
Sbjct: 512 TDNR 515


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 276/570 (48%), Gaps = 44/570 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K +  V++  I    ++   + A+ V  K+    + P     N++++ L+K G+ D    
Sbjct: 220 KPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALR 279

Query: 106 FYEEMVLC-GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             ++M+L  G   DV     L+   C  G++ KAL+LFDE +  G+ PT V YT+LI G 
Sbjct: 280 LKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGC 339

Query: 165 CNENKMVEAESMFRSMRECGV----------------------------------VPNLY 190
             E    E   + R M E G+                                  VP+++
Sbjct: 340 DAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVF 399

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY  L+    K   V+ A+  + +M    ++P++VT   L+ G C+ G +  A   +  M
Sbjct: 400 TYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM 459

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G  PN   Y  L+ G+ K     +A +L +EM +  +S   +TYNILI GLC V ++
Sbjct: 460 PGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRV 519

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
              + +L++   EG +   +TYNS+I+G+ K G M  AL++  QM EKG+ PN+VT++S 
Sbjct: 520 CEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSF 579

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           IDG C+    D A+ L   M    + PD+  + A I+   K GNM   L     +L+  +
Sbjct: 580 IDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGL 639

Query: 431 TPSVFTVSSLIHGLFKNGRI-SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           TP+V   +S + G +KN ++ + A  F+     +      + +  +Y  +I      G +
Sbjct: 640 TPNVTVYNSFVTG-YKNLKMMAEASKFYYSMIKQR----IAADTEIYTTLIDGFSKVGNV 694

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L+S+M +++  PD+ T+T +  GL R+  +     LL DM ++ + P+ V   ++
Sbjct: 695 AFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNML 754

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           +  +  +G L+ AF+  + +  S +   +T
Sbjct: 755 INAHIRDGKLQEAFQLHDKMLSSGVVPDDT 784



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 225/461 (48%), Gaps = 8/461 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI      G  +E   + R++    +LP+    N ++ GL++  +++     ++ +
Sbjct: 331 TYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLV 390

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G V DV TYG LI        V +A+NL+D+M + G++P++V    L+ G C +  M
Sbjct: 391 VDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCM 449

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  ++  M   G  PN  TY  LM GY K    ++A    +EM  + +     T+ +L
Sbjct: 450 DEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNIL 509

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLC V  +             G  P    YN +I+G  KAG +  A+++  +M +  I
Sbjct: 510 INGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGI 569

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P++ TY   I G C     + A  LL  M   GI  ++  YN+ I+ +CK+G+M  AL 
Sbjct: 570 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALH 629

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
               + + G+ PNV  ++S + G      +  A   Y  M+ + +  D  ++T LIDG S
Sbjct: 630 FLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFS 689

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K GN+   L LY EML     P   T ++L HGL ++G I  A        D T    C 
Sbjct: 690 KVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLL---DDMTRLDVC- 745

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           PN V Y  +I A   DG++ +A +L   M S  + PD+ TY
Sbjct: 746 PNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 229/552 (41%), Gaps = 83/552 (15%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK------------------ 148
           Y  MV  G+V D  +   L+           AL LFDEM  K                  
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 149 -----------------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                            G++P   +Y I I GLC       A  +   MRE G+ P  +T
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 192 YNALMDGYCKVADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           YN+++D   KV  ++ AL    +M L    + +V     LM G C  GE+  A + F   
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + GV P    Y  LI G    G   E   LC +M +  + P  + +N++IKGL    Q 
Sbjct: 321 VRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A  L   +   G+  +V TY  LI    K   + +A+++  +M E GV+P++VT  SL
Sbjct: 381 EDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSL 439

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G C+ G +D A+ LY+EM  K   P+ V +T L+ G  K     +   L  EM +  +
Sbjct: 440 LLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV 499

Query: 431 T-----------------------------------PSVFTVSSLIHGLFKNGRISNALN 455
           +                                   P+  T +S+I+G  K G + +AL 
Sbjct: 500 SCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALA 559

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            + +  +K      +PN V Y + I   C       A KL   MR + + PD   Y   +
Sbjct: 560 MYRQMCEKG----ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFI 615

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF---LKES 572
               +   M   +  L  ++K G+ P+  +    V GY+   +LK     S+F   + + 
Sbjct: 616 NMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYK---NLKMMAEASKFYYSMIKQ 672

Query: 573 RIGSSETEGHTT 584
           RI +++TE +TT
Sbjct: 673 RI-AADTEIYTT 683



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 172/377 (45%), Gaps = 40/377 (10%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQA 86
           HH  +   N  + ++     PS+ +  +L++ + E G ++EAL +Y ++      P    
Sbjct: 411 HHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVT 470

Query: 87  CNALLNGLIKKGKFDSVWEFYEEM----VLCG---------------------------- 114
              L+ G IKK  FD  +    EM    V CG                            
Sbjct: 471 YTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFV 530

Query: 115 ---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
               V   +TY  +I+     G +  AL ++ +M +KGI P +V YT  I G C  N   
Sbjct: 531 SEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCD 590

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  +   MR  G+ P++  YNA ++ +CK  +++ AL F   +L   L PNV  +   +
Sbjct: 591 LAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFV 650

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G   +  +  A  F+  M K  +  +  +Y  LIDG  K GN+  A+ L SEM      
Sbjct: 651 TGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNI 710

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  T+  L  GLC  G ++GA+ LL  M +  +  N VTYN LI+ + ++G +++A  +
Sbjct: 711 PDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQL 770

Query: 352 CSQMTEKGVEPNVVTFS 368
             +M   GV P+  T++
Sbjct: 771 HDKMLSSGVVPDDTTYN 787



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P+   ++++I  F + G +  AL +YR++    + P I    + ++G  +    D   
Sbjct: 534 FVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAV 593

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +    M   G+  D+  Y   I+  C QG++  AL+    ++  G+ P V +Y   + G 
Sbjct: 594 KLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
            N   M EA   + SM +  +  +   Y  L+DG+ KV +V  ALE Y EML ++  P+ 
Sbjct: 654 KNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDD 713

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF  L  GLC+ G++  A      M +  V PN   YN LI+ H + G L EA  L  +
Sbjct: 714 KTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDK 773

Query: 285 MEKFEISPDVFTYNIL 300
           M    + PD  TYNI 
Sbjct: 774 MLSSGVVPDDTTYNIF 789


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 237/456 (51%), Gaps = 14/456 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVT-ENLLKSRKPHHVCYSVFNALNSL-EIPKFNPSVFSTL 58
           + Y+L   K +K A   ++++  ++ L ++       SV ++L  + + P  N  V S L
Sbjct: 90  MLYILTKHKHFKTAHAFLENIAFKDFLSTQ-------SVLSSLVKIHDDPDVNSHVLSWL 142

Query: 59  IIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           +I +       EA+ V+  + V    P + AC  LLN L K    D+VW+ Y++MV  G+
Sbjct: 143 VIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGV 202

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           VA++  Y VL+  CC  GDV KA  +  EM  K + P +  Y  LI   C +    EA S
Sbjct: 203 VANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALS 262

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   M   G+ P+++TYN+L+ G+C+   +  A++ + ++   ++ PN VT+  L+DG C
Sbjct: 263 VQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYC 320

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +V +L  A      M++ G++P +  YN ++   C+ G L +A  L +EM + +I PD  
Sbjct: 321 RVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNV 380

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           T N LI   C +G +  A  +  KM   G+  +  TY +LI G+CK  +++KA  +   M
Sbjct: 381 TCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGM 440

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + G  P+  T+S L+D  CK  N +A + L  E+V + L  DV V+ ALI    K   +
Sbjct: 441 MDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKI 500

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
               R+   M +  I       +SL +G +K G+++
Sbjct: 501 DCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVN 536



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 204/411 (49%), Gaps = 8/411 (1%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D  +   V+ + ++++G  N     EA  +F  MR  G  P+L+    L++   K    +
Sbjct: 131 DPDVNSHVLSWLVIVYG--NSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTD 188

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
              + Y +M+   +  N+  + VL+   CK G++  A      M    VFP++F YN LI
Sbjct: 189 TVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLI 248

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
             +CK G  +EA+S+   ME   ISPD+FTYN LI G C  G++  A  L + +  + + 
Sbjct: 249 SLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVT 306

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VTY SLIDGYC+  D+++AL +   M+EKG+ P V+T++S++   C+ G +  A  L
Sbjct: 307 PNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANIL 366

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  + + PD V    LI+   K G+M+  L++  +M+ A +    FT  +LIHG  K
Sbjct: 367 LNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCK 426

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
              I  A           D G+ SP++  Y+ ++ + C         KL  ++    L  
Sbjct: 427 AKEIDKAKELLF---GMMDAGF-SPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCV 482

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           D   Y  ++R   + +++     +L  M   GI  D+V+   +  GY + G
Sbjct: 483 DVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVG 533



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 6/286 (2%)

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA+ +   M      P +    +L+  L      +    + +KM K G++AN+  YN L+
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLL 213

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              CK GD+EKA  V S+M  K V P++ T+++LI   CK G    A+ +   M +  + 
Sbjct: 214 HACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGIS 273

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD+  + +LI G  ++G M+E ++L++++ +  +TP+  T +SLI G  +   +  AL  
Sbjct: 274 PDIFTYNSLIYGFCREGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALR- 330

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            L++     G Y  P  + Y +I++ LC  G++  A+ L ++M    + PDN T  T++ 
Sbjct: 331 -LKEVMSEKGLY--PTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLIN 387

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +   M   + +   M+  G+  D    + ++ G+ +  ++  A
Sbjct: 388 AYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKA 433



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 12/298 (4%)

Query: 274 NLFEAMSLCSEMEKFEISPDV----FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           +     S+ S + K    PDV     ++ +++ G         A  + + M   G   ++
Sbjct: 114 DFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYG--NSKMTHEAIQVFEHMRVNGFRPHL 171

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
                L++   K+   +    +  +M + GV  N+  ++ L+   CK+G+++ A  + +E
Sbjct: 172 HACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSE 231

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M +K + PD+  +  LI    K G   E L +   M  A I+P +FT +SLI+G  + GR
Sbjct: 232 MELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGR 291

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A+  F +  D T      PNHV Y ++I   C    + +A +L   M    L P   
Sbjct: 292 MREAVQLFRDIKDVT------PNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVI 345

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           TY ++LR L    R+ D  +LL +M +  I PD V    ++  Y + GD++SA +  +
Sbjct: 346 TYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKD 403


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 230/461 (49%), Gaps = 8/461 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ T++ A+      ++AL +++  I    +P     N LL  LI+   FD  W  + E+
Sbjct: 91  LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +V D  ++G++I  CC  G  +K   L   + + G+ P VVIYT LI G C +  +
Sbjct: 151 K-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           + A+++F  M   G+VPN +TY+ LM+G+ K        + Y  M    + PN   +  L
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   C  G +  A   F  M + G+   +  YN LI G C+     EA+ L  ++ K  +
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TYNILI G C V +++ A  L  ++   G+   +VTYN+LI GY K  ++  AL 
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+ + P+ VT++ LID   +  + + A  +++ M    LVPDV  ++ L+ GL 
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             GNMKE  +L+K + E  + P+    +++IHG  K G    AL    E           
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSG----MV 505

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           PN   + + I  LC D +  +A  L   M +  L+P    Y
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 228/456 (50%), Gaps = 7/456 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + ++N  +     D    F   M+  G V    T+  L+          KA  +F+E+  
Sbjct: 93  DTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS 152

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K +      + I+I G C     V+   +   + E G+ PN+  Y  L+DG CK  +V  
Sbjct: 153 K-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVML 211

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L PN  T+ VLM+G  K G  R     + +M + G+ PN + YNCLI 
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +C  G + +A  + +EM +  I+  V TYNILI GLC   +   A  L+ K+ K G+  
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+VTYN LI+G+C    M+ A+ + +Q+   G+ P +VT+++LI G  K  N+  A+ L 
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + + P  V +T LID  ++  + ++   ++  M ++ + P V+T S L+HGL  +
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451

Query: 448 GRISNALNFFLEKTDKTDGG-YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           G +  A   F     K+ G  +  PN V+Y  +I   C +G   +A +L ++M    + P
Sbjct: 452 GNMKEASKLF-----KSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVP 506

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +  ++ + +  L R ++  +  +LL  MI  G+ P 
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 206/455 (45%), Gaps = 23/455 (5%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-------- 188
           KAL LF+    +G++ T    + +++ L +   + +A+S+   +   G +P+        
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLIS-GRIPSSLMLQLTQ 79

Query: 189 -------LYT--YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
                   YT  Y+ +++ Y      ++AL F H M+H    P   TF  L+  L +   
Sbjct: 80  AHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNY 139

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A   F  + K  V  + + +  +I G C+AG   +   L + +E+F +SP+V  Y  
Sbjct: 140 FDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G +  A+ L  KM + G++ N  TY+ L++G+ K+G   +   +   M   G
Sbjct: 199 LIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSG 258

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + PN   ++ LI   C  G +D A  ++ EM  K +   V+ +  LI GL +     E +
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           +L  ++ +  ++P++ T + LI+G     ++ +A+  F    ++      SP  V Y  +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLF----NQLKSSGLSPTLVTYNTL 374

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I        +  A  L  +M    + P   TYT ++    R         + + M K G+
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGL 434

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           VPD     V++ G   +G++K A +  + L E  +
Sbjct: 435 VPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHL 469



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 148/318 (46%), Gaps = 5/318 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y+ +++ +  + +  +A++    M      P   T+N L+  L      + A  +  ++
Sbjct: 91  LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  ++ +  ++  +I G C+ G   K   + + + E G+ PNVV +++LIDG CK GN+
Sbjct: 151 -KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L+ +M    LVP+   ++ L++G  K G  +E  ++Y+ M  + I P+ +  + L
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I     +G +  A   F E  +K  G  C    + Y  +I  LC   +  +A KL   + 
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREK--GIACGV--MTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L P+  TY  ++ G    ++M   + L   +   G+ P  V    ++ GY +  +L 
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 561 SAFRCSEFLKESRIGSSE 578
            A    + ++E  I  S+
Sbjct: 386 GALDLVKEMEERCIAPSK 403



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+ + P I   N L+NG     K DS    + ++   GL   +VTY  LI       ++ 
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL+L  EM ++ I P+ V YTILI      N   +A  M   M + G+VP++YTY+ L+
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 445

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C   ++  A + +  +   +LQPN V +  ++ G CK G    A      M + G+ 
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMV 505

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           PN+  +   I   C+     EA  L  +M    + P V  Y ++ K
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 259/543 (47%), Gaps = 31/543 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N S F+  + +    G  E+A  V R++     +P     + +L  L    K +  + 
Sbjct: 448 KINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL 504

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            +EEM   GLVADV TY +++D  C  G + +A   F+EM + G  P VV YT LIH   
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML--------- 216
              K+  A  +F +M   G +PN+ TY+AL+DG+CK   + +A + +  M          
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624

Query: 217 --------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
                    ++ +PNVV +G L+DG CK+  +  A      M+  G  PN  VY+ LIDG
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK G L EA  + +EM +      ++TY+ LI     V + + A  +L KM +     N
Sbjct: 685 LCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 744

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VV Y  +IDG CK G  ++A  +   M EKG +PNVVT++++IDG  + G I+  + L  
Sbjct: 745 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLE 804

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            M  K + P+ V +  LID   K+G +     L +EM +            +I G  K  
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF 864

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--SDNLRP 506
             S  L   L++  + D    +P   LY  ++  L    ++  A +L  ++   S  L  
Sbjct: 865 IESLGL---LDEIGQDDT---APFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVD 918

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
            + TY +++  L  A ++     L ++M K G++P+      +++G   N  +  A    
Sbjct: 919 YSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978

Query: 567 EFL 569
           +F+
Sbjct: 979 DFI 981



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 261/545 (47%), Gaps = 36/545 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVW--- 104
           +P +F++L+ A+   G    A  + +K+      P     N L+  +   G  DS+    
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC--GDKDSLSCHL 428

Query: 105 -----EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
                + Y EM+  G+V + +       C C  G   KA ++  EMI +G  P    Y+ 
Sbjct: 429 LELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++  LCN +KM  A  +F  M+  G+V ++YTY  ++D +CK   + +A ++++EM    
Sbjct: 489 VLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL---- 275
             PNVVT+  L+    K  ++  A   F  M   G  PNI  Y+ LIDGHCKAG +    
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608

Query: 276 --FEAMSLCSEMEKFEI-----------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             FE M    ++   ++            P+V  Y  L+ G C + ++E A  LL  M  
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSM 668

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           EG   N + Y++LIDG CK G +++A  V ++M+E G    + T+SSLID   K    D 
Sbjct: 669 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  + ++M+  S  P+VV++T +IDGL K G   E  +L + M E    P+V T +++I 
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  + G+I       LE  ++      +PN+V Y  +I   C +G +  A  L  +M+  
Sbjct: 789 GFGRIGKIETC----LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 844

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +       Y  ++ G    K  ++ + LL ++ +    P   + +++V    +   L+ A
Sbjct: 845 HWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMA 902

Query: 563 FRCSE 567
            R  E
Sbjct: 903 LRLLE 907



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/563 (29%), Positives = 253/563 (44%), Gaps = 38/563 (6%)

Query: 41  ALNSLEIPKFNP-SVFST-LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLI 95
           AL  +E   F P +VF T LI    E    EEA   L   R    LP +   + LL G +
Sbjct: 289 ALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            K +          M++ G       +  L+   C  GD   A  L  +M+  G  P  V
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYV 408

Query: 156 IYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +Y ILI  +C +   +       AE  +  M   GVV N    ++     C      +A 
Sbjct: 409 VYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM+     P+  T+  ++  LC   ++  A   F  M + G+  +++ Y  ++D  
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG + +A    +EM +   +P+V TY  LI       ++  A  L + M  EG L N+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQM-----------------TEKGVEPNVVTFSSLID 372
           VTY++LIDG+CK G MEKA  +  +M                  +    PNVV + +L+D
Sbjct: 589 VTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLD 648

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK   ++ A  L   M ++   P+ +V+ ALIDGL K G + E   +  EM E     
Sbjct: 649 GFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPA 708

Query: 433 SVFTVSSLIHGLFKNGR---ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +++T SSLI   FK  R    S  L+  LE +       C+PN V+Y  +I  LC  G+ 
Sbjct: 709 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------CAPNVVIYTEMIDGLCKVGKT 761

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A KL   M     +P+  TYT M+ G  R  ++   + LL  M   G+ P+ V  +V+
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821

Query: 550 VRGYQENGDLKSAFRCSEFLKES 572
           +    +NG L  A    E +K++
Sbjct: 822 IDHCCKNGALDVAHNLLEEMKQT 844



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 241/570 (42%), Gaps = 72/570 (12%)

Query: 60  IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
           IA  E+G +++  + +R     P+    N L+   +K    DS    + EM L  L  D 
Sbjct: 218 IALEELGRLKD--FRFR-----PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDG 270

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T        C  G   +AL L   M  +   P  V YT LI GLC  +   EA      
Sbjct: 271 FTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNR 327

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           MR    +PN+ TY+ L+ G      + R     + M+     P+   F  L+   C  G+
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDG----------H-------------------- 269
              A      M K G  P   VYN LI            H                    
Sbjct: 388 HSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLN 447

Query: 270 -----------CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
                      C AG   +A S+  EM      PD  TY+ ++  LC   ++E A  L +
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFE 507

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M + G++A+V TY  ++D +CK G +E+A    ++M E G  PNVVT+++LI    KA 
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT------- 431
            +  A  L+  M+ +  +P++V ++ALIDG  K G M++  ++++ M  +K         
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYF 627

Query: 432 ----------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
                     P+V    +L+ G  K  R+  A        D      C PN ++Y A+I 
Sbjct: 628 KQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLL----DAMSMEGCEPNQIVYDALID 683

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G++ +A ++ ++M          TY++++    + KR      +L+ M++    P
Sbjct: 684 GLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 743

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + VI   M+ G  + G    A++  + ++E
Sbjct: 744 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 773



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 136/578 (23%), Positives = 213/578 (36%), Gaps = 112/578 (19%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           IEVL  I+  +A+++  +  G+              G       Y  L+D      D   
Sbjct: 136 IEVLRLIERPSAVISFFVWAGR------------QIGYKHTSPVYNALVDLIVRDDDEKV 183

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
              L  ++ D   E       +L+   C       A      +++    P+  TYN L+ 
Sbjct: 184 PEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQ 243

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            + K   ++ A   + EM   NL+ +  T       LCKVG+ R A      M      P
Sbjct: 244 AFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREA---LTLMETENFVP 300

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +   Y  LI G C+A    EAM   + M      P+V TY+ L+ G     QL   + +L
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKAL-----------------------SVC-- 352
             M  EG   +   +NSL+  YC  GD   A                        S+C  
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGD 420

Query: 353 ----------------SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
                           S+M   GV  N +  SS     C AG  + A  +  EM+ +  +
Sbjct: 421 KDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 397 P-----------------------------------DVVVFTALIDGLSKDGNMKETLRL 421
           P                                   DV  +T ++D   K G +++  + 
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EM E   TP+V T ++LIH   K  ++S A   F  +T  ++G  C PN V Y+A+I 
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF--ETMLSEG--CLPNIVTYSALID 596

Query: 482 ALCYDGQILKASKLFSDM-----------------RSDNLRPDNCTYTTMLRGLLRAKRM 524
             C  GQ+ KA ++F  M                   ++ RP+   Y  +L G  +  R+
Sbjct: 597 GHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRV 656

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +   LL  M   G  P+ ++   ++ G  + G L  A
Sbjct: 657 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 694


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 261/552 (47%), Gaps = 42/552 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+T I AF + G +EEA+ ++ K+E   V+P +   N +++GL   G++D  + F E+M
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+   ++TY +L+        +  A  +  EM +KG  P V++Y  LI  L     +
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSL 373

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKV--ADV----------------------- 205
            +A  +   M   G+     TYN L+ GYCK   AD+                       
Sbjct: 374 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSV 433

Query: 206 ----------NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                     + AL F  EML  N+ P       L+ GLCK G+   A   ++     G 
Sbjct: 434 ICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF 493

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +    N L+ G C+AG L E   +  E+       D  +YN LI G CG  +L+ A  
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            + +M K+G+  +  TY+ LI G      +E+A+         G+ P+V T+S +IDG C
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCC 613

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA   +    L+ EM+  +L P+ VV+  LI    + G +   L L ++M    I+P+  
Sbjct: 614 KAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SLI G+    R+  A    LE+  + +G    PN   Y A+I      GQ++K   L
Sbjct: 674 TYTSLIKGMSIISRVEEA-KLLLEEM-RMEG--LEPNVFHYTALIDGYGKLGQMVKVECL 729

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S N+ P+  TYT M+ G  R   + +   LL +M + GIVPD++  +  + GY +
Sbjct: 730 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789

Query: 556 NGDLKSAFRCSE 567
            G +  AF+ S+
Sbjct: 790 QGGVLQAFKGSD 801



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 245/530 (46%), Gaps = 39/530 (7%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +      +N   K GK +   E + +M   G+V +VVTY  +ID     G   +A 
Sbjct: 248 VSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAF 307

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
              ++M+++G+EPT++ Y+IL+ GL    ++ +A  + + M E G  PN+  YN L+D  
Sbjct: 308 MFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSL 367

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV---- 255
            +   +N+A+E    M+   L     T+  L+ G CK G+   A      M   G     
Sbjct: 368 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQ 427

Query: 256 --FPNIFVYNC-----------------------------LIDGHCKAGNLFEAMSLCSE 284
             F ++    C                             LI G CK G   +A+ L  +
Sbjct: 428 GSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLK 487

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
                   D  T N L+ GLC  G+LE    + +++   G + + V+YN+LI G C    
Sbjct: 488 FLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKK 547

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A     +M +KG++P+  T+S LI G      ++ A+  + +     ++PDV  ++ 
Sbjct: 548 LDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +IDG  K    +E  +L+ EM+   + P+    + LI    ++GR+S AL     + D  
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL---REDMK 664

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G  SPN   Y ++I+ +    ++ +A  L  +MR + L P+   YT ++ G  +  +M
Sbjct: 665 HKG-ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQM 723

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + V  LL +M    + P+ +   VM+ GY  +G++  A R    ++E  I
Sbjct: 724 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGI 773



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 184/357 (51%), Gaps = 5/357 (1%)

Query: 32  HHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQA 86
           HH+  S    +  + +   +P   + +TLI    + G   +A+ ++ K      L   + 
Sbjct: 440 HHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKT 499

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            NALL+GL + GK +  +   +E++  G V D V+Y  LI  CCG   + +A    DEM+
Sbjct: 500 SNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMV 559

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            KG++P    Y+ILI GL N NK+ EA   +   +  G++P++YTY+ ++DG CK     
Sbjct: 560 KKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTE 619

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
              + + EM+ +NLQPN V +  L+   C+ G L  A      M   G+ PN   Y  LI
Sbjct: 620 EGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 679

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G      + EA  L  EM    + P+VF Y  LI G   +GQ+   E LL++M+ + + 
Sbjct: 680 KGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 739

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            N +TY  +I GY ++G++ +A  +  +M EKG+ P+ +T+   I G  K G +  A
Sbjct: 740 PNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 221/471 (46%), Gaps = 26/471 (5%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSL----------EIP------ 48
           L  AK   +A C++K++TE   K   P+ + Y+  N ++SL          EI       
Sbjct: 332 LTKAKRIGDAYCVLKEMTE---KGFPPNVIVYN--NLIDSLIEAGSLNKAIEIKDLMVSK 386

Query: 49  --KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSV 103
                 S ++TLI  + + G  + A  + +++  +       +  +++  L     FDS 
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSA 446

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
             F  EM+L  +         LI   C  G   KA+ L+ + ++KG          L+HG
Sbjct: 447 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHG 506

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC   K+ E   + + +   G V +  +YN L+ G C    ++ A  F  EM+   L+P+
Sbjct: 507 LCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPD 566

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
             T+ +L+ GL  + ++  A  F+    + G+ P+++ Y+ +IDG CKA    E   L  
Sbjct: 567 NYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFD 626

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    + P+   YN LI   C  G+L  A  L + M  +GI  N  TY SLI G     
Sbjct: 627 EMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 686

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +E+A  +  +M  +G+EPNV  +++LIDG  K G +     L  EM  K++ P+ + +T
Sbjct: 687 RVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 746

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            +I G ++DGN+ E  RL  EM E  I P   T    I+G  K G +  A 
Sbjct: 747 VMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAF 797


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 242/533 (45%), Gaps = 40/533 (7%)

Query: 59  IIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           I AF+  G  + AL  + +   L    P ++  N LL+ L+++    +V   Y+ M   G
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V TY +LI   C    V  A  + DEM  KG  P  V +  ++ G+C   ++ EA 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
                      VP   +YNA++   C    +       +EM+   LQPNVVT+  ++D  
Sbjct: 213 GFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 267

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  ELR A      M   G  PN+  +  L+ G  + G + +A+S+   M     +P  
Sbjct: 268 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 327

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +YN+LI+GLC +G L+GA      M +  +L N  TY++L+DG+   GD++ A+ + ++
Sbjct: 328 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G +PNVV ++++ID  CK    D A  L  +M++ +  P+ V F  LI  L   G 
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 447

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR-----------ISNALNFFLEKTDK 463
           +   L ++  M      P+  T + L+HGLF+ G            ++N     L   + 
Sbjct: 448 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 507

Query: 464 TDGGYC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
                C                     P+   + AII A C +G++  A+ L   M + N
Sbjct: 508 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 567

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              +   YT ++  L    ++ + M+ L  M+  GI P+     V+VR    N
Sbjct: 568 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 226/505 (44%), Gaps = 35/505 (6%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A +  L   G  D V    +EM L G+          I      G   +AL  F    D 
Sbjct: 56  ATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDL 115

Query: 149 GI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           G  +P V +Y  L+  L  EN +     ++ +MR+ GV PN+YTYN L+   C+   V+ 
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF-------------VH----- 249
           A +   EM      P+ V+ G ++ G+CK+G +  A  F              VH     
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 235

Query: 250 ------------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
                       M + G+ PN+  Y  ++D  CKA  L  A ++ + M     +P+V T+
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             L+KG    G++  A  +   M  EG   + ++YN LI G C  GD++ AL   + M  
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             + PN  T+S+L+DG   AG++D AM ++ EM      P+VVV+T +ID L K     +
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              L  +ML     P+  T ++LI  L   GR+  ALN F     + +G  C PN   Y 
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVF--HGMRRNG--CHPNDRTYN 471

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            ++  L  +G    A  +  +M ++       TY T++  L +       M+LL  M+  
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 531

Query: 538 GIVPDAVINQVMVRGYQENGDLKSA 562
           GI PDA     ++  Y + G +  A
Sbjct: 532 GIQPDAFTFNAIIHAYCKEGKVSIA 556



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           T++    ++G +EEA       E +P   + NA+++ L  + +   V+    EMV  GL 
Sbjct: 197 TIVSGMCKLGRVEEARGFL--AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 254

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +VVTY  ++D  C   ++  A  +   M+  G  P V+ +T L+ G   + K+ +A SM
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 314

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           +  M + G  P+  +YN L+ G C + D+  AL+F++ M  + L PN  T+  L+DG   
Sbjct: 315 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 374

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G+L  A   +  M   G  PN+ VY  +ID  CK     +A SL  +M      P+  T
Sbjct: 375 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 434

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N LI  LC  G++  A  +   M + G   N  TYN L+ G  +EG+ + A ++  +M 
Sbjct: 435 FNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEML 494

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G E ++VT++++I+  C+      AM L   M+++ + PD   F A+I    K+G + 
Sbjct: 495 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 554

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
               L  +M       +V   + LI  L   G++SNA+ + L+   +   G C PN   +
Sbjct: 555 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE---GIC-PNEATW 610

Query: 477 AAIIQAL 483
             +++A+
Sbjct: 611 NVLVRAI 617



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 187/399 (46%), Gaps = 9/399 (2%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNAL 90
           + VF+ +N +      P+V  ++T++ AF +   +  A  +  ++  +   P +    AL
Sbjct: 239 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 298

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  + GK       +  MV  G     ++Y VLI   C  GD+  AL+ F+ M    +
Sbjct: 299 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 358

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P    Y+ L+ G  N   +  A  ++  M+  G  PN+  Y  ++D  CK    ++A  
Sbjct: 359 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 418

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +ML  N  PN VTF  L+  LC  G +  A N F  M + G  PN   YN L+ G  
Sbjct: 419 LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 478

Query: 271 KAGNLFEAMSLCSEM--EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           + GN  +A ++  EM    FE+S  + TYN +I  LC +   + A  LL +M  +GI  +
Sbjct: 479 REGNHKDAFAMVIEMLNNGFELS--LVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 536

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
             T+N++I  YCKEG +  A  +  QM       NVV ++ LI   C  G +  AM    
Sbjct: 537 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 596

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +M+ + + P+   +  L+  +  +      + L+K ++E
Sbjct: 597 KMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVE 635



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 192/432 (44%), Gaps = 10/432 (2%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYT 191
           GDV        EM  +G+  T       I           A   F    + G   P +  
Sbjct: 65  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 124

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YN L+D   +   V   +  Y  M    + PNV T+ +L+  LC+   + AA      M+
Sbjct: 125 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 184

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G  P+   +  ++ G CK G + EA    +E    + S     YN ++  LCG  ++ 
Sbjct: 185 RKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQAS-----YNAVVHALCGEFRMW 239

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
               ++ +M + G+  NVVTY +++D +CK  ++  A ++ ++M   G  PNV+TF++L+
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G  + G +  A+ ++  MV +   P  + +  LI GL   G++K  L  +  M    + 
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 359

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T S+L+ G    G +  A+  + E   K+ G  C PN V+Y  +I  LC      +
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEM--KSSG--CKPNVVVYTNMIDVLCKKMMFDQ 415

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L   M  DN  P+  T+ T++  L    R+   + +   M + G  P+      ++ 
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 475

Query: 552 GYQENGDLKSAF 563
           G    G+ K AF
Sbjct: 476 GLFREGNHKDAF 487



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 9/281 (3%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V  YN L+  L     +     +   M K G+  NV TYN LI   C+   ++ A  +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M+ KG  P+ V+  +++ G CK G ++ A G   E V     P    + A++  L  
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCG 234

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +  M E   +  EM++  + P+V T ++++    K   +  A               C+P
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG----CTP 290

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + + A+++    DG++  A  ++  M  +   P   +Y  ++RGL     +   +   
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             M +  ++P+A     +V G+   GDL  A      +K S
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 391


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 246/502 (49%), Gaps = 53/502 (10%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I     +L  L+K   +  V   + +M   GL +++VT  +LI+C    G    + ++
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  ++ KG     +                                   T+  L+ G C 
Sbjct: 70  FANILKKGYGSDAI-----------------------------------TFTTLIKGLCL 94

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             ++++AL F+ +++    + N V++G L++GLCKVG+ RAA  F   +    V P++ +
Sbjct: 95  KGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVM 154

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +IDG CK   + +A +L  EM    I P V TYN LI GLC + QL+ A GLL KM 
Sbjct: 155 YNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMI 214

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC------ 375
            E I   V T++ LID +CKEG M++A +V + M ++ V+PN+VT++SL+DG        
Sbjct: 215 LEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVK 274

Query: 376 KAGNI--------DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           KA +I        D AM L+ EM  K + PD+V++ +LIDGL K G     L+   EM  
Sbjct: 275 KAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHY 334

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
               P +FT +SL+  L KN  +  A+    +  D+       P+   Y  +I  LC  G
Sbjct: 335 RGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQG----IQPSVCTYNILINGLCKSG 390

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
           ++  A K+F D+       D  TY  M++G  +     + + +++ M   G  PDA   +
Sbjct: 391 RLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCE 450

Query: 548 VMVRGYQENGDLKSAFRCSEFL 569
           +++R   + G+   A +  E +
Sbjct: 451 IIIRSLFDKGENDKAGKFREMI 472



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 18/362 (4%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   + TLI    ++G    AL   R+I+   V P +   N +++GL K    +  + 
Sbjct: 114 KLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFN 173

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y EMV   +   VVTY  LI   C    +  A+ L  +MI + I PTV  ++ILI   C
Sbjct: 174 LYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFC 233

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGY--------------CKVADVNRALEF 211
            E KM EA+++F  M +  V PN+ TYN+LMDG+                +  V+ A+  
Sbjct: 234 KEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNL 293

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           + EM    + P++V +  L+DGLCK G    A  F   M   G  P+IF YN L+D  CK
Sbjct: 294 FEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCK 353

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
             ++ +A+ L ++++   I P V TYNILI GLC  G+L+ AE + + +  +G   +V T
Sbjct: 354 NYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYT 413

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++I G+CK+G  ++ L++ S+M + G  P+      +I      G  D A G + EM+
Sbjct: 414 YNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA-GKFREMI 472

Query: 392 IK 393
           ++
Sbjct: 473 VR 474



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 176/401 (43%), Gaps = 46/401 (11%)

Query: 215 MLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +LHH N  P++  FG ++  L K        +    M   G+  N+   + LI+ + + G
Sbjct: 2   LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
               + S+ + + K     D  T+  LIKGLC  G++  A     K+  +G   N V+Y 
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LI+G CK G    AL    ++  K V+P+VV ++++IDG CK   ++ A  LY EMV K
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            + P VV +  LI GL     +K+ + L  +M+   I P+V+T S LI    K G++  A
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 454 LNFF--LEKTDKT----------DGGY--------------------------------- 468
            N F  + K D            DG +                                 
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V+Y ++I  LC  G+   A K   +M      PD  TY ++L  L +   +   +
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            LL  +   GI P      +++ G  ++G LK A +  E L
Sbjct: 362 ELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDL 402



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNG 93
           FN    +   +  PSV  ++TLI     M  +++A+ +  K+   ++ P +   + L++ 
Sbjct: 172 FNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDA 231

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA--------------L 139
             K+GK       +  M+   +  ++VTY  L+D       V KA              +
Sbjct: 232 FCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAM 291

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           NLF+EM  K I P +VIY  LI GLC   +   A      M   G  P+++TYN+L+D  
Sbjct: 292 NLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDAL 351

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK   V++A+E   ++    +QP+V T+ +L++GLCK G L+ A   F  +   G   ++
Sbjct: 352 CKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDV 411

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + YN +I G CK G   E +++ S+M+    SPD     I+I+ L   G+ + A G  ++
Sbjct: 412 YTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA-GKFRE 470

Query: 320 MYKEG 324
           M   G
Sbjct: 471 MIVRG 475


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 219/425 (51%), Gaps = 5/425 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  + N  L+ L K G  D  W F+ E  L     DV ++G+ I   C  G+V K   L
Sbjct: 71  PSSFSFNNALDLLAKSGNLDRTWGFFTE-YLGRTQFDVYSFGITIKAFCENGNVSKGFEL 129

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G+ P V IYTILI   C    + +A+ MF  M + G+  N Y Y  +++G+ K
Sbjct: 130 LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 189

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                   E Y +M    + PN+ T+  L+   C+ G+L  A   F  ++K GV  N   
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C+ G + +A  L   M++  I+P   T+N+L+ GLC  GQL+ A   L+K+ 
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+   +VTYN LI G+ K G+      +  +M ++G+ P+ VT++ L++   ++ +I+
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  M    LVPD   +  LI GL   GNM E  +LYK M+E  + P+    +++I
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  K      AL  FLE+  K      +PN   Y + IQ LC DG+ ++A +L  +M  
Sbjct: 430 NGYCKECNSYKALK-FLEEMVKNG---VTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 502 DNLRP 506
             L+P
Sbjct: 486 AGLKP 490



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 194/395 (49%), Gaps = 8/395 (2%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F+ M   G  P+ +++N  +D   K  +++R   F+ E L    Q +V +FG+ +   C+
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFGITIKAFCE 119

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +         M   GV PN+F+Y  LI+  C+ G++ +A  + S M+   ++ + + 
Sbjct: 120 NGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYI 179

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y I+I G    G  +    L QKM   G+L N+ TYNSLI  YC++G +  A  V  +++
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++GV  N VT++ LI G C+ G +  A GL   M    + P    F  L+DGL   G + 
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + L   +++    + P++ T + LI G  K G  S       E  D+      SP+ V Y
Sbjct: 300 KALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG----ISPSKVTY 355

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++        I KA ++F  M+   L PD  TY  ++ GL     M++   L   M++
Sbjct: 356 TILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M + P+ VI   M+ GY +  +   +++  +FL+E
Sbjct: 416 MHLQPNDVIYNTMINGYCKECN---SYKALKFLEE 447



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++Y++   +  +C+  +V++  E   +M    + PNV  + +L++  C+ G++  A   F
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M   G+  N ++Y  +I+G  K G   +   L  +M+   + P+++TYN LI   C  
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+L  A  +  ++ K G+  N VTYN LI G C++G + KA  +  +M    + P   TF
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + L+DG C  G +D A+    ++ +  L P +V +  LI G SK GN      L +EM +
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I+PS  T + L++   ++  I  A   F     K  G    P+   Y  +I  LC  G
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMF--HLMKRIG--LVPDQHTYGVLIHGLCIKG 401

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            +++ASKL+  M   +L+P++  Y TM+ G  +       +  L +M+K G+ P+
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 177/370 (47%), Gaps = 5/370 (1%)

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           +A+++   +   + ++L+ +  M+     P+  +F   +D L K G L     FF     
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
              F +++ +   I   C+ GN+ +   L ++ME   +SP+VF Y ILI+  C  G ++ 
Sbjct: 102 RTQF-DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A+ +  +M   G+ AN   Y  +I+G+ K+G  +    +  +M   GV PN+ T++SLI 
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             C+ G +  A  ++ E+  + +  + V +  LI GL + G + +   L + M  A I P
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T + L+ GL   G++  AL++ LEK      G C P  V Y  +I      G     
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSY-LEKLKLI--GLC-PTLVTYNILISGFSKVGNSSVV 336

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S+L  +M    + P   TYT ++   +R+  +     +   M ++G+VPD     V++ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396

Query: 553 YQENGDLKSA 562
               G++  A
Sbjct: 397 LCIKGNMVEA 406



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 23/245 (9%)

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           ++I+   ++  ++ ++  +  MV+K   P    F   +D L+K GN+  T   + E L  
Sbjct: 43  AVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL-G 101

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           +    V++    I    +NG +S       +   +T G   SPN  +Y  +I+A C +G 
Sbjct: 102 RTQFDVYSFGITIKAFCENGNVSKGFELLAQM--ETMG--VSPNVFIYTILIEACCRNGD 157

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           I +A  +FS M    L  +   YT M+ G  +     D   L   M  +G++P+      
Sbjct: 158 IDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNS 217

Query: 549 MVRGYQENGDLKSAFR-----------CSEFLKESRIGS-------SETEGHTTRSFLGH 590
           ++  Y  +G L  AF+           C+       IG        S+ EG   R    H
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH 277

Query: 591 LKPTV 595
           + PT 
Sbjct: 278 INPTT 282


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 258/540 (47%), Gaps = 13/540 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           PSV  ++ ++    +   +EEAL ++   K + +P +   N L++ L ++GK ++  E  
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIR 427

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M   GL  +V+T  ++ID  C    + +A ++F+ M DK   P  V ++ LI GL   
Sbjct: 428 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 487

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A S++  M +CG VP    Y +L+  + K        + Y EM+H    P++   
Sbjct: 488 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 547

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
              MD + K GE       F  +   G  P+   Y+ LI G  KAG   E   L   M++
Sbjct: 548 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 607

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                D   YN +I G C  G++  A  LL++M  +G    VVTY S+IDG  K   +++
Sbjct: 608 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 667

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +    G++ NVV +SSLIDG  K G ID A  +  E++ K L P+V  +  L+D
Sbjct: 668 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 727

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K   + E L  ++ M + K  P+  T S LI+GL +  + + A  F+ E        
Sbjct: 728 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG--- 784

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN + Y  +I  L   G IL+AS LFS  +++   PD+ +Y  M+ GL  A + +D 
Sbjct: 785 -LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
             L  +    G         V++    +   L+ A      LKE     +    H +RSF
Sbjct: 844 YALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE-----TAKSQHASRSF 898



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 248/566 (43%), Gaps = 41/566 (7%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKG 98
            +AL    +P+    V   L  A + + + +   W  ++ E +   +A N+LL  + +  
Sbjct: 83  LSALGEKPLPELVIGVLKRLKDANTAVNYFQ---WAEKQTEKVHCPEAYNSLLMVMARNT 139

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +FD +    EEM L G          L+  C     + +A ++   M      P    YT
Sbjct: 140 EFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYT 199

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI  L    +      +F  M+E G   N++ +  L+  + +   V+ AL    EM  +
Sbjct: 200 ILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 259

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           +L  ++V + V +D   K G++  +  FF  M   G+ P+   Y  +I   CKA  L EA
Sbjct: 260 SLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEA 319

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-------------- 324
           + L  ++E+    P  + YN +I G    G+ + A GLL++   +G              
Sbjct: 320 VELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTC 379

Query: 325 --------------------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
                                + NV TYN LID  C+EG +  AL +   M   G+ PNV
Sbjct: 380 LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 439

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           +T + +ID  CKA  ++ A  ++  M  K   P+ V F++LIDGL K G + +   LY++
Sbjct: 440 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEK 499

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML+    P     +SLI   FK GR  +    + E         CSP+  L    +  + 
Sbjct: 500 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG----CSPDLTLINTYMDCVF 555

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G+  K   LF ++ +    PD  +Y+ ++ GL++A    +   L   M + G V D  
Sbjct: 556 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 615

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLK 570
               ++ G+ ++G +  A++  E +K
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMK 641



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 3/199 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N  V+S+LI  F ++G I+EA  +  ++    + P +   N LL+ L+K  + +    
Sbjct: 681 KLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 740

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ M       + +TY +LI+  C      KA   + EM   G++P  + YT +I GL 
Sbjct: 741 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 800

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               ++EA  +F   +  G +P+  +YNA+++G         A   + E        +  
Sbjct: 801 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 860

Query: 226 TFGVLMDGLCKVGELRAAG 244
           T  VL+D L K   L  A 
Sbjct: 861 TCVVLLDALHKAECLEQAA 879



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 120/333 (36%), Gaps = 82/333 (24%)

Query: 250 MAKFGVFPNI---FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           ++ FG   NI    V NC+     K+  L EA  +   M KF+  P    Y ILI  L  
Sbjct: 153 LSGFGPSSNISIELVANCV-----KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSE 207

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
           V                                 +E D    L +  QM E G E NV  
Sbjct: 208 V---------------------------------REPD--PMLILFHQMQELGYEVNVHL 232

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           F++LI    + G +DAA+ L  EM   SL  D+V++   ID   K G +  + + + EM 
Sbjct: 233 FTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMK 292

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
                          HGL                          P+ V Y ++I  LC  
Sbjct: 293 S--------------HGLM-------------------------PDDVTYTSMIGVLCKA 313

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            ++ +A +LF  +  +   P    Y TM+ G   A +  +   LL      G +P  +  
Sbjct: 314 NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 373

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             ++    +   ++ A R  E +K   + +  T
Sbjct: 374 NCILTCLGKKRRVEEALRIFEEMKRDAVPNVPT 406


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 229/461 (49%), Gaps = 8/461 (1%)

Query: 54  VFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           ++ T++ A+      ++AL +++  I    +P     N L+  LI+   FD  W  + E+
Sbjct: 91  LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +V D  ++G++I  CC  G  +K   L   + + G+ P VVIYT LI G C    +
Sbjct: 151 K-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           + A+++F  M   G+VPN +TY+ LM+G+ K        + Y  M    + PN   +  L
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   C  G +  A   F  M + G+   +  YN LI G C+     EA+ L  ++ K  +
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP++ TYNILI G C VG+++ A  L  ++   G+   +VTYN+LI GY K  ++  AL 
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+ + P+ VT++ LID   +    + A  +++ M    LVPDV  ++ LI GL 
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             GNMKE  +L+K + E  + P+    +++IHG  K G    AL    E           
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG----MV 505

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           PN   + + I  LC D +  +A  L   M +  L+P    Y
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 228/456 (50%), Gaps = 7/456 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + ++N  +     D    F   M+  G V    T+  L+          KA  +F+E+  
Sbjct: 93  DTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKS 152

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K +      + I+I G C     V+   +   + E G+ PN+  Y  L+DG CK  +V  
Sbjct: 153 K-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVML 211

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L PN  T+ VLM+G  K G  R     + +M + G+ PN + YNCLI 
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +C  G + +A  + +EM +  I+  V TYNILI GLC   +   A  L+ K+ K G+  
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+VTYN LI+G+C  G M+ A+ + +Q+   G+ P +VT+++LI G  K  N+  A+ L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + + P  V +T LID  ++    ++   ++  M ++ + P V+T S LIHGL  +
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451

Query: 448 GRISNALNFFLEKTDKTDGG-YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           G +  A   F     K+ G  +  PN V+Y  +I   C +G   +A +L ++M    + P
Sbjct: 452 GNMKEASKLF-----KSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +  ++ + +  L R ++  +  +LL  MI  G+ P 
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 205/423 (48%), Gaps = 9/423 (2%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +++         +AL     MI +G  P    +  L+  L   N   +A  +F  ++
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              VV + Y++  ++ G C+     +       +    L PNVV +  L+DG CK G + 
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A N F  M + G+ PN   Y+ L++G  K G   E   +   M++  I P+ + YN LI
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
              C  G ++ A  +  +M ++GI   V+TYN LI G C+     +A+ +  ++ + G+ 
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN+VT++ LI+G C  G +D A+ L+ ++    L P +V +  LI G SK  N+   L L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNA--LNFFLEKTDKTDGGYCSPNHVLYAAI 479
            KEM E  I PS  T + LI    +      A  ++  +EK+         P+   Y+ +
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLV------PDVYTYSVL 444

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I  LC  G + +ASKLF  +   +L+P++  Y TM+ G  +       + LL +M+  G+
Sbjct: 445 IHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGM 504

Query: 540 VPD 542
           VP+
Sbjct: 505 VPN 507



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 206/455 (45%), Gaps = 23/455 (5%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN-------- 188
           KAL LF+    +G++ T    + +++ L +   + +A+S+   +   G +P+        
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLIS-GRIPSSLMLQLTQ 79

Query: 189 -------LYT--YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
                   YT  Y+ +++ Y      ++AL F H M+H    P   TF  LM  L +   
Sbjct: 80  AHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNY 139

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A   F  + K  V  + + +  +I G C+AG   +   L + +E+F +SP+V  Y  
Sbjct: 140 FDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C  G +  A+ L  KM + G++ N  TY+ L++G+ K+G   +   +   M   G
Sbjct: 199 LIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSG 258

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + PN   ++ LI   C  G +D A  ++ EM  K +   V+ +  LI GL +     E +
Sbjct: 259 IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           +L  ++ +  ++P++ T + LI+G    G++  A+  F    ++      SP  V Y  +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF----NQLKSSGLSPTLVTYNTL 374

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I        +  A  L  +M    + P   TYT ++    R         + + M K G+
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGL 434

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           VPD     V++ G   +G++K A +  + L E  +
Sbjct: 435 VPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHL 469



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+ + P I   N L+NG    GK D+    + ++   GL   +VTY  LI       ++ 
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL+L  EM ++ I P+ V YTILI      N   +A  M   M + G+VP++YTY+ L+
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C   ++  A + +  +   +LQPN V +  ++ G CK G    A      M   G+ 
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           PN+  +   I   C+     EA  L  +M    + P V  Y ++ K
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 251/513 (48%), Gaps = 42/513 (8%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S ++ ++ A  +   +++A  + R++    VLP     N+L+ G    G++       ++
Sbjct: 252 STYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKK 311

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G++ DVVT   L+   C  G +  A ++FD M  KG +  +  Y I+++G   +  
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +V+   +F  M   G+ P+ + +N L+  Y K   ++RA   ++EM    ++P+VVT+  
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++  LC++G++  A   F  M   GV P+I  Y+ LI G C  G+L +A  L  +M    
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + PD+  +N +I  LC +G++  A+ +       G+  NV+ YN+L+DGYC  G ME AL
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V   M   G++PNVV + +L++G CK G ID  + L+ E++ K + P   ++  ++ GL
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            + G        + EM E+ I    +T S ++ GLFKN                      
Sbjct: 612 FQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNS--------------------- 650

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
                         C D  IL    LF ++ + N++ D  T   M+ G+ + +R+ +   
Sbjct: 651 --------------CSDEAIL----LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           L A + + G+VP  V   +M+    + G ++ A
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 240/493 (48%), Gaps = 42/493 (8%)

Query: 96  KKGKFDSVWEFYEEM-VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           K G+ D +     E   +C  + + V Y  +ID    +GDV KA +LF+EM+ +GI P +
Sbjct: 194 KSGQADELLRMMAEGGAVC--LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDL 251

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  +++ LC    M +AE++ R M + GV+P+ +TYN+L+ GY        A+    +
Sbjct: 252 STYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKK 311

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA----------------------- 251
           M    + P+VVT   LM  LCK G+++ A + F  MA                       
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371

Query: 252 ------------KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                         G+ P+  ++N LI  + K G L  A  + +EM +  + PDV TY+ 
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC +G+++ A     +M  +G+  ++ TY+ LI G+C  GD+ KA  +  QM  KG
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P++  F+ +I+  CK G +  A  ++   +   L P+V+V+  L+DG    G M+  L
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           R++  M+ A I P+V    +L++G  K GRI   L+ F E   K       P+  LY  I
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG----IKPSTTLYNII 607

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  L   G+ + A   F +M    +  D  TY+ +L GL +     + ++L  ++  M +
Sbjct: 608 LHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV 667

Query: 540 VPDAVINQVMVRG 552
             D     +M+ G
Sbjct: 668 KIDITTLNIMIAG 680



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 235/489 (48%), Gaps = 10/489 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN- 140
           P +     L++   +  +      F+ +++  GL  D +    L+   C      +AL+ 
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--PNLYTYNALMDG 198
           L   M   G  P V  Y I++  LC++ K  +A+ + R M E G V  PN   YN ++DG
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           + K  DVN+A + ++EM+   + P++ T+  +++ LCK   +  A      M   GV P+
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
            + YN LI G+   G   EA+ +  +M    I PDV T N L+  LC  G+++ A  +  
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G   ++ +Y  +++GY  +G +     + + M   G+ P+   F+ LI    K G
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  ++ EM  + + PDVV ++ +I  L + G M + +  + +M++  + PS+ T  
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI G   +G +  A +  L+  +K       P+   +  II  LC  G+++ A  +F  
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKG----MRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             S  L P+   Y T++ G     +M + + +   M+  GI P+ V+   +V GY + G 
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581

Query: 559 LK---SAFR 564
           +    S FR
Sbjct: 582 IDEGLSLFR 590



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 244/507 (48%), Gaps = 42/507 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  +S  G  +EA+ V +K+    +LP +   N+L+  L K GK     + ++ M
Sbjct: 288 TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347

Query: 111 VLCGLVADVVTYGVLIDCCCGQG---DVMKALNL-------------------------- 141
            + G   D+ +Y ++++    +G   D+ +  NL                          
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407

Query: 142 ------FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
                 F+EM ++G+EP VV Y+ +I  LC   KM +A   F  M + GV P++ TY+ L
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G+C   D+ +A +   +M++  ++P++  F  +++ LCK+G +  A N F      G+
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+ VYN L+DG+C  G +  A+ +   M    I P+V  Y  L+ G C VG+++    
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L +++  +GI  +   YN ++ G  + G    A     +MTE G+  +  T+S ++ G  
Sbjct: 588 LFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLF 647

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K    D A+ L+ E+   ++  D+     +I G+ +   ++E   L+  +  + + PSV 
Sbjct: 648 KNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVV 707

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T S ++  L K G +  A + F   +   + G   PN  L   +++ L    +I++A   
Sbjct: 708 TYSIMMTNLIKEGLVEEADDMF---SSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTY 764

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAK 522
            S +   +   D+ T TT+L  L  +K
Sbjct: 765 LSKIDERSFSLDHST-TTLLIDLFSSK 790



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 34/377 (9%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L P + T+G+LMD   +    +    FF  + K G+  +  + + L+ G C+A    EA+
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 280 S-LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI--LANVVTYNSLI 336
             L   M      PDVF+Y I++K LC   +   A+ LL+ M + G   L N V YN++I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+ KEGD+ KA  + ++M ++G+ P++ T++ +++  CKA  +D A  +  +MV K ++
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD   + +LI G S  G  KE +R+ K+M    I P V T++SL+  L K+G+I +A + 
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 457 FLE---KTDKTD--------GGYCS--------------------PNHVLYAAIIQALCY 485
           F     K  KTD         GY +                    P+  ++  +I+A   
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK 403

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + +A+ +F++MR   + PD  TY+T++  L R  +M D +     MI  G+ P    
Sbjct: 404 CGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463

Query: 546 NQVMVRGYQENGDLKSA 562
              +++G+  +GDL  A
Sbjct: 464 YHFLIQGFCTHGDLLKA 480



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 9/212 (4%)

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           + P + T+  L+D   +A      +  + +++   L  D ++ + L+ GL +     E L
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 420 R-LYKEMLEAKITPSVFTVSSLIHGL---FKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
             L   M      P VF+   ++  L    K+G+    L    E      G  C PN V 
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE-----GGAVCLPNAVA 218

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I     +G + KA  LF++M    + PD  TY  ++  L +A+ M     +L  M+
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             G++PD      ++ GY   G  K A R S+
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSK 310



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 12/255 (4%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           VF+ + S  I + N  V+ TL+  + ++G I+E L ++R+I    + P+    N +L+GL
Sbjct: 553 VFDVMVSAGI-QPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            + G+       + EM   G+  D  TY +++          +A+ LF E+    ++  +
Sbjct: 612 FQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDI 671

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
               I+I G+    ++ EA+ +F S+   G+VP++ TY+ +M    K   V  A + +  
Sbjct: 672 TTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS 731

Query: 215 MLHHNL-QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           M +    QPN      ++  L +  E+  AG +   + +     +      LID      
Sbjct: 732 MENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLID------ 785

Query: 274 NLFEAMSLCSEMEKF 288
            LF +   C E  +F
Sbjct: 786 -LFSSKGTCREHIRF 799


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 248/498 (49%), Gaps = 9/498 (1%)

Query: 65  MGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD--V 119
           +G IEEA+ VY +++   +  +I ACN++L+G +K GK + ++EFY+EM+  G  +D   
Sbjct: 169 VGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANT 228

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T G LI   C  G V +   L ++ +  G++P    Y  LI G C          +  +
Sbjct: 229 ETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHT 288

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M     +P +YTY  +++G CK  +   A   ++++      P+ V +  ++ GLC++G 
Sbjct: 289 MIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGS 348

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A   +  M   G+ PN + YN ++ G  K+G+   A  L +EM          T N 
Sbjct: 349 FGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNK 408

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I  LC  G+ + A  + +KM + GI A+ +TYNSLI G+CKEG +++ +++ +++  + 
Sbjct: 409 IISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQD 468

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
            +P+V  +  LI   CK G+ +AA  L  +M  K L P+   +  ++ G  K G+ +   
Sbjct: 469 PQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVR 528

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            LY E        +  T + +I  L   G+   A   F +K  +T       + + Y ++
Sbjct: 529 ELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMF-KKMSETG---IKADAITYNSL 584

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I+  C +G++ K+  L +++ +  L+P   +Y +++  L +         L  DM+  GI
Sbjct: 585 IRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGI 644

Query: 540 VPDAVINQVMVRGYQENG 557
            P A + + ++ G  + G
Sbjct: 645 EPHANLREHLISGLCKQG 662



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 220/475 (46%), Gaps = 7/475 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIE---EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N      LI AF + G +    E L  + K  + P     N L+ G  +   + S+ E  
Sbjct: 227 NTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVL 286

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M+    +  + TY  +I+  C   + ++A  +F+++ D+G  P  V+YT +IHGLC  
Sbjct: 287 HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEM 346

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               EA  ++  M + G+ PN YTYN ++ G  K  D  RA E Y+EM +       VT 
Sbjct: 347 GSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTC 406

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC  G+   A   F  M++ G+  +   YN LI G CK G + E M+L +E+  
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +  P V  Y +LI   C  G  E A+ LL  M  +G+  N  TY++++ G  K GD E 
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
              + ++   KG      T + +I   C  G  D A  ++ +M    +  D + + +LI 
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIR 586

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K+G + +++ L  E++   + PS  + +SLI  L +NG   +A   + +   K    
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKG--- 643

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
              P+  L   +I  LC  G+  +       M  + ++P    +  +   L++++
Sbjct: 644 -IEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSE 697



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 220/490 (44%), Gaps = 41/490 (8%)

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV---------------- 155
           + G + D  +    + C CG G + +A+ ++ ++ + GI  ++V                
Sbjct: 149 IAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTE 208

Query: 156 ---------------------IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
                                    LI   C+  ++     +     + G+ P   TYN 
Sbjct: 209 LLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNK 268

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G+C+  +     E  H M+  N  P + T+  +++GLCK  E   A   F  +   G
Sbjct: 269 LIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG 328

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P+  +Y  +I G C+ G+  EA  L  EM    + P+ +TYN ++ G    G  E A 
Sbjct: 329 YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERAC 388

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  +M  +G     VT N +I   C  G  ++A  V  +M+E G++ + +T++SLI G 
Sbjct: 389 ELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGF 448

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D  M L  E+V +   P V ++  LI    KDG+ +   RL  +M    + P+ 
Sbjct: 449 CKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNA 508

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           +T  +++HG  K+G   +    + E  +K   GY +        II  LC  G+  +AS+
Sbjct: 509 YTYDTMLHGSLKSGDFEHVRELYNETCNK---GYGTTTATC-NKIISELCSRGKSDEASE 564

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +F  M    ++ D  TY +++RG  +  ++   M LL +++  G+ P A     ++    
Sbjct: 565 MFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLC 624

Query: 555 ENGDLKSAFR 564
           +NGD +SA R
Sbjct: 625 QNGDAESAKR 634



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 19/279 (6%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--GILANVVTYNSLIDGYCKEGDMEKA 348
           +PD  + N+L + L     +  A     KM ++  G + +  +    +   C  G +E+A
Sbjct: 121 TPDPISSNMLFEALLDAKAVRAA-----KMVRDIAGFIPDSASLEQYVKCLCGVGFIEEA 175

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA--LI 406
           + V  Q+ E G+  ++V  +S++ G  KAG  +     Y EM+      D    T   LI
Sbjct: 176 IEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLI 235

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL--FKN-GRISNALNFFLEKTDK 463
                 G +     L  + L+  + P   T + LI G    KN   +S  L+  + +   
Sbjct: 236 QAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHL 295

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P    Y  II  LC + + L+A ++F+D++     PD   YTTM+ GL     
Sbjct: 296 -------PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGS 348

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +   L  +M+  G+ P+A     M+ G  ++GD + A
Sbjct: 349 FGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 4/194 (2%)

Query: 380 IDAAMGLYTEMV--IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           +DA      +MV  I   +PD       +  L   G ++E + +Y ++ EA I  S+   
Sbjct: 135 LDAKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVAC 194

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S++ G  K G+      F+ E      G     N      +IQA C  GQ+ +  +L +
Sbjct: 195 NSILSGCLKAGKTELLFEFYQEMIKA--GTASDANTETVGCLIQAFCDSGQVARGYELLN 252

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
                 L P N TY  ++ G  +AK    +  +L  MI    +P     Q ++ G  +N 
Sbjct: 253 QFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNE 312

Query: 558 DLKSAFRCSEFLKE 571
           +   A+R    LK+
Sbjct: 313 ECLEAYRVFNDLKD 326


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 208/409 (50%), Gaps = 5/409 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T++   ++   I+EA+ +  KI      P I   NALLNGL K G+ +   +   ++
Sbjct: 36  TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G   DVVTY  LID    +    +A  LF EM  +G+    V YT LI GL    K+
Sbjct: 96  VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A S++++M   G VP++ T + ++DG CK   +  A+  +  M    L PN V +  L
Sbjct: 156 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 215

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK  ++  A      M K    P+   YN LIDG CK+G++  A +   EM +   
Sbjct: 216 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGC 275

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV+TYNILI G C  G  + A G+   M       NVVTY +LI G CK   + KA  
Sbjct: 276 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASL 335

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
               M E+G  P+   +SSL+DG CK+G ++    L+ EM  +S V +    T LI  L 
Sbjct: 336 YYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME-RSGVANSQTRTRLIFHLC 394

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           K   + E + L+  + +  + P  +  +S+I  L K+G+++     + E
Sbjct: 395 KANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQE 442



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 208/416 (50%), Gaps = 6/416 (1%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           I     +++ L K  K        E++   G    + TY  L++  C  G + +A++L  
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +++D G  P VV YT LI GL  + +  EA  +F+ M   G+  +   Y AL+ G  +  
Sbjct: 94  KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            + +A   Y  M      P+VVT   ++DGLCK G + AA   F  M   G+ PN  VY+
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 213

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LI G CKA  +  A+ + ++M+K   +PD  TYNILI GLC  G +  A     +M + 
Sbjct: 214 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA 273

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G   +V TYN LI G+CK G+ + A  V   M+     PNVVT+ +LI G CK   +  A
Sbjct: 274 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
              Y  M  +   PD  V+++L+DGL K G ++    L+ EM  + +  S  T + LI  
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFH 392

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L K  R+  A++ F     + +G    P+   Y +II AL   G++ +   ++ +M
Sbjct: 393 LCKANRVDEAVSLF--NAIRKEG---MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 218/435 (50%), Gaps = 6/435 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+NGL+K G         +E    G   D+ TY  ++D       + +A+ L +++   G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             PT+  Y  L++GLC   ++ EA  + R + + G  P++ TY +L+DG  K      A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + + EM    L  + V +  L+ GL + G++  A + +  M   G  P++   + +IDG 
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CKAG +  A+ +   ME   ++P+   Y+ LI GLC   +++ A  +L +M K     + 
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TYN LIDG CK GD+  A +   +M E G +P+V T++ LI G CKAGN DAA G++ +
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M      P+VV +  LI GL K   + +    Y+ M E    P  F  SSL+ GL K+G+
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +      F E            N      +I  LC   ++ +A  LF+ +R + + P   
Sbjct: 365 LEGGCMLFDEMERSG-----VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPY 418

Query: 510 TYTTMLRGLLRAKRM 524
            Y +++  L+++ ++
Sbjct: 419 AYNSIISALIKSGKV 433



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 5/376 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++ L+    +MG +EEA+ + RKI      P +    +L++GL KK +    ++ ++E
Sbjct: 70  ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL  D V Y  LI      G + +A +++  M  +G  P VV  + +I GLC   +
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  +F+SM   G+ PN   Y+AL+ G CK   ++ ALE   +M      P+ +T+ +
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DGLCK G++ AA  FF  M + G  P+++ YN LI G CKAGN   A  +  +M    
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            SP+V TY  LI GLC   QL  A    Q M + G   +   Y+SL+DG CK G +E   
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M   GV  N  T + LI   CKA  +D A+ L+   + K  +P    + ++I  L
Sbjct: 370 MLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNA-IRKEGMPHPYAYNSIISAL 427

Query: 410 SKDGNMKETLRLYKEM 425
            K G + E   +Y+EM
Sbjct: 428 IKSGKVNEGQAVYQEM 443



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 217/429 (50%), Gaps = 5/429 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T+ +LI+     G +++A +L  E    G    +  YT ++  L    K+ EA ++   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G  P + TYNAL++G CK+  +  A++   +++ +   P+VVT+  L+DGL K    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   F  MA  G+  +   Y  LI G  +AG + +A S+   M      PDV T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC  G++  A  + + M   G+  N V Y++LI G CK   M+ AL + +QM +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+ +T++ LIDG CK+G++ AA   + EM+     PDV  +  LI G  K GN      
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           ++ +M  ++ +P+V T  +LI GL K  +++ A  ++    ++     C P+  +Y++++
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG----CPPDSFVYSSLV 356

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC  G++     LF +M    +  ++ T T ++  L +A R+ + + L   + K G+ 
Sbjct: 357 DGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP 415

Query: 541 PDAVINQVM 549
                N ++
Sbjct: 416 HPYAYNSII 424



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 4/390 (1%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T++ L++G  K   + +A     E   +    ++ T+  ++D L K  +++ A      +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G  P I  YN L++G CK G L EA+ L  ++     +PDV TY  LI GL    + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A  L ++M   G+  + V Y +LI G  + G + +A SV   MT +G  P+VVT S++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           IDG CKAG I AA+ ++  M  + L P+ VV++ALI GL K   M   L +  +M +A  
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           TP   T + LI GL K+G ++ A  FF E  +      C P+   Y  +I   C  G   
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG----CKPDVYTYNILISGFCKAGNTD 296

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A  +F DM S    P+  TY T++ GL + +++    +    M + G  PD+ +   +V
Sbjct: 297 AACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSETE 580
            G  ++G L+      + ++ S + +S+T 
Sbjct: 357 DGLCKSGKLEGGCMLFDEMERSGVANSQTR 386


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 256/520 (49%), Gaps = 15/520 (2%)

Query: 58  LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL-C 113
           ++ AF+E G + EA   ++  R   +   ++  N +L   +  G F    + ++ MV   
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL+ D  ++  LI  CC  G + +   L   M  +G        T+++   C + +  + 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +FR M E G  PN+  Y A +DG CK A V +A     EM+   L+PNV T   L++G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 234 LCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           LCK+G    A   F+ + K   + PN+  Y  +I G+CK G L  A  L   M +  ++P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  TY  LI G C  G    A  L+ KM +EG   N+ TYN+LIDG CK+G +++A  V 
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                +G++ + VT++ +I   CK G+I  A+ L+  M      PD+  +T LI    + 
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             M+E+ +L+ + L  ++ P+  T +S+I G  K G+ ++AL  F    ++     C  +
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF----ERMVQNGCQAD 535

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + Y A+I  LC + ++ +A  L+  M    L P   T  T+     R ++ +  + +L 
Sbjct: 536 SITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILD 595

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
            + K     +  +N V+VR     G ++ A   S FLK++
Sbjct: 596 RLDKRR--KNHTVN-VLVRKLSAIGHVEDA---SLFLKKA 629



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 216/497 (43%), Gaps = 42/497 (8%)

Query: 81  LP-AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           LP A +A   ++    + G+     +   EM   GL   V T   ++      G    A 
Sbjct: 110 LPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYAR 169

Query: 140 NLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
            +FD M+ +G + P    +  LI G C + +M E +++   M+                G
Sbjct: 170 KVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQG--------------QG 215

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +C                      +  T  V++   C+ G  R     F  M + G  PN
Sbjct: 216 FCL---------------------DNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPN 254

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  Y   IDG CK   + +A  +  EM    + P+V+T+  LI GLC +G  E A  L  
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFL 314

Query: 319 KMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           K+ K      NV TY  +I GYCKEG + +A  +  +M E+G+ PN  T+++LI G CK 
Sbjct: 315 KLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKE 374

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G+ + A  L  +M  +   P++  + ALIDGL K G ++E  ++ +      +     T 
Sbjct: 375 GSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTY 434

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + +I    K G I+ AL+ F    ++     C P+   Y  +I   C   Q+ ++ KLF 
Sbjct: 435 TVMITEHCKQGHITYALDLF----NRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFD 490

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
              +  L P   TYT+M+ G  +  +    + +   M++ G   D++    ++ G  +  
Sbjct: 491 KCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKES 550

Query: 558 DLKSAFRCSEFLKESRI 574
            L+ A    E + + R+
Sbjct: 551 RLEEARALYEGMLDKRL 567



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 193/403 (47%), Gaps = 7/403 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++  I    +  ++++A +V  ++    + P +    +L+NGL K G  +  +  + +++
Sbjct: 258 YTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLI 317

Query: 112 LCG-LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  +V TY V+I   C +G + +A  L   M+++G+ P    YT LI G C E   
Sbjct: 318 KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSF 377

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +   MR  G  PN+YTYNAL+DG CK   +  A +      +  LQ + VT+ V+
Sbjct: 378 NCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVM 437

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK G +  A + F  MA+ G  P+I  Y  LI  +C+   + E+  L  +    E+
Sbjct: 438 ITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIEL 497

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P   TY  +I G C VG+   A  + ++M + G  A+ +TY +LI G CKE  +E+A +
Sbjct: 498 VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARA 557

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M +K + P  VT  +L    C+      A+ +   +  +     V V   L+  LS
Sbjct: 558 LYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNV---LVRKLS 614

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
             G++++     K+ L+  +       +S I+  + N + + A
Sbjct: 615 AIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYALA 657


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 242/533 (45%), Gaps = 40/533 (7%)

Query: 59  IIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           I AF+  G  + AL  + +   L    P ++  N LL+ L+++    +V   Y+ M   G
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V TY +LI   C    V  A  + DEM  KG  P  V +  ++ G+C   ++ EA 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
                      VP   +YNA++   C    +       +EM+   LQPNVVT+  ++D  
Sbjct: 160 GFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 214

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  ELR A      M   G  PN+  +  L+ G  + G + +A+S+   M     +P  
Sbjct: 215 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 274

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +YN+LI+GLC +G L+GA      M +  +L N  TY++L+DG+   GD++ A+ + ++
Sbjct: 275 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 334

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G +PNVV ++++ID  CK    D A  L  +M++ +  P+ V F  LI  L   G 
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 394

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR-----------ISNALNFFLEKTDK 463
           +   L ++  M      P+  T + L+HGLF+ G            ++N     L   + 
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 454

Query: 464 TDGGYC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
                C                     P+   + AII A C +G++  A+ L   M + N
Sbjct: 455 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 514

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              +   YT ++  L    ++ + M+ L  M+  GI P+     V+VR    N
Sbjct: 515 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 225/501 (44%), Gaps = 35/501 (6%)

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-E 151
           GL   G  D V    +EM L G+          I      G   +AL  F    D G  +
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P V +Y  L+  L  EN +     ++ +MR+ GV PN+YTYN L+   C+   V+ A + 
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF-------------VH--------- 249
             EM      P+ V+ G ++ G+CK+G +  A  F              VH         
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186

Query: 250 --------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                   M + G+ PN+  Y  ++D  CKA  L  A ++ + M     +P+V T+  L+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           KG    G++  A  +   M  EG   + ++YN LI G C  GD++ AL   + M    + 
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PN  T+S+L+DG   AG++D AM ++ EM      P+VVV+T +ID L K     +   L
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +ML     P+  T ++LI  L   GR+  ALN F     + +G  C PN   Y  ++ 
Sbjct: 367 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVF--HGMRRNG--CHPNDRTYNELLH 422

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L  +G    A  +  +M ++       TY T++  L +       M+LL  M+  GI P
Sbjct: 423 GLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQP 482

Query: 542 DAVINQVMVRGYQENGDLKSA 562
           DA     ++  Y + G +  A
Sbjct: 483 DAFTFNAIIHAYCKEGKVSIA 503



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 57  TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           T++    ++G +EEA       E +P   + NA+++ L  + +   V+    EMV  GL 
Sbjct: 144 TIVSGMCKLGRVEEARGFL--AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 201

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +VVTY  ++D  C   ++  A  +   M+  G  P V+ +T L+ G   + K+ +A SM
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           +  M + G  P+  +YN L+ G C + D+  AL+F++ M  + L PN  T+  L+DG   
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 321

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G+L  A   +  M   G  PN+ VY  +ID  CK     +A SL  +M      P+  T
Sbjct: 322 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 381

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N LI  LC  G++  A  +   M + G   N  TYN L+ G  +EG+ + A ++  +M 
Sbjct: 382 FNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEML 441

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G E ++VT++++I+  C+      AM L   M+++ + PD   F A+I    K+G + 
Sbjct: 442 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 501

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
               L  +M       +V   + LI  L   G++SNA+ + L+   +   G C PN   +
Sbjct: 502 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE---GIC-PNEATW 557

Query: 477 AAIIQAL 483
             +++A+
Sbjct: 558 NVLVRAI 564



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 187/399 (46%), Gaps = 9/399 (2%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNAL 90
           + VF+ +N +      P+V  ++T++ AF +   +  A  +  ++  +   P +    AL
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  + GK       +  MV  G     ++Y VLI   C  GD+  AL+ F+ M    +
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 305

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P    Y+ L+ G  N   +  A  ++  M+  G  PN+  Y  ++D  CK    ++A  
Sbjct: 306 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 365

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +ML  N  PN VTF  L+  LC  G +  A N F  M + G  PN   YN L+ G  
Sbjct: 366 LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 425

Query: 271 KAGNLFEAMSLCSEM--EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           + GN  +A ++  EM    FE+S  + TYN +I  LC +   + A  LL +M  +GI  +
Sbjct: 426 REGNHKDAFAMVIEMLNNGFELS--LVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 483

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
             T+N++I  YCKEG +  A  +  QM       NVV ++ LI   C  G +  AM    
Sbjct: 484 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 543

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +M+ + + P+   +  L+  +  +      + L+K ++E
Sbjct: 544 KMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVE 582



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 192/432 (44%), Gaps = 10/432 (2%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYT 191
           GDV        EM  +G+  T       I           A   F    + G   P +  
Sbjct: 12  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 71

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YN L+D   +   V   +  Y  M    + PNV T+ +L+  LC+   + AA      M+
Sbjct: 72  YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 131

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G  P+   +  ++ G CK G + EA    +E    + S     YN ++  LCG  ++ 
Sbjct: 132 RKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQAS-----YNAVVHALCGEFRMW 186

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
               ++ +M + G+  NVVTY +++D +CK  ++  A ++ ++M   G  PNV+TF++L+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G  + G +  A+ ++  MV +   P  + +  LI GL   G++K  L  +  M    + 
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T S+L+ G    G +  A+  + E   K+ G  C PN V+Y  +I  LC      +
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEM--KSSG--CKPNVVVYTNMIDVLCKKMMFDQ 362

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L   M  DN  P+  T+ T++  L    R+   + +   M + G  P+      ++ 
Sbjct: 363 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 422

Query: 552 GYQENGDLKSAF 563
           G    G+ K AF
Sbjct: 423 GLFREGNHKDAF 434



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 9/281 (3%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V  YN L+  L     +     +   M K G+  NV TYN LI   C+   ++ A  +
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M+ KG  P+ V+  +++ G CK G ++ A G   E V     P    + A++  L  
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCG 181

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +  M E   +  EM++  + P+V T ++++    K   +  A               C+P
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG----CTP 237

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N + + A+++    DG++  A  ++  M  +   P   +Y  ++RGL     +   +   
Sbjct: 238 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 297

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
             M +  ++P+A     +V G+   GDL  A      +K S
Sbjct: 298 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 338


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 264/530 (49%), Gaps = 12/530 (2%)

Query: 51   NPSVFSTLIIAFSEMGHIEEALW----VYRKIEVL-PAIQACNALLNGLIKKGKFDSVWE 105
            N  +++TLI  + + G+++EAL     +YR+  V  P I   NALL+   ++G       
Sbjct: 504  NDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIH--NALLHAFYREGMITEAEH 561

Query: 106  FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            F + M    +  D V++  +ID  C +G+++ A +++D+M+  G  P V  Y  L+ GLC
Sbjct: 562  FRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLC 621

Query: 166  NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                +V+A      + +     +  T+NAL+ G C+   ++ AL+   +M+ +N  P++ 
Sbjct: 622  QGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIH 681

Query: 226  TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            T+ +L+ G C+ G++  A      M + GV P+   Y CL++G    G +  A  +  E+
Sbjct: 682  TYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI 741

Query: 286  E-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
              K  +  D   YN L+ G      +   + ++  MY+  +  N  +YN L+ GY K G 
Sbjct: 742  ICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 801

Query: 345  MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
              K+L +   M  KG+ P+ VT+  LI G  + G ID A+    +MV++ + PD +VF  
Sbjct: 802  FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDI 861

Query: 405  LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            LI   S+   M   L+++  M    ++PS  T S++I+GL + G + ++     E     
Sbjct: 862  LITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG 921

Query: 465  DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                  PNH  Y A++ A C  G+I +A +L  +M++  + P     ++++RGL R  ++
Sbjct: 922  ----LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKL 977

Query: 525  LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             + +++ + M++ G+VP       ++    +   +  A      ++  R+
Sbjct: 978  EEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRL 1027



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 268/552 (48%), Gaps = 27/552 (4%)

Query: 35  CYSVFNALNSLEIPKFNPS---VFSTLIIAFSEMGHIEEALWVYRKIEVL--------PA 83
           C ++F +L    I +F+P+   VF  L+ A+ +   + +A      + VL         +
Sbjct: 137 CTAIFTSLLR-TISRFDPTNHVVFELLVKAYVKERKVLDA-----AVAVLFMDDCGFKAS 190

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
             +CN +LN L+++G+   VW F  E +       V T  +L++  C  G+  KA ++  
Sbjct: 191 PVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQ 250

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M    I  +V   TIL H    + +   A  +   M    V  ++YTYN ++D  C++ 
Sbjct: 251 KMKSCHISNSVTYNTIL-HWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIK 309

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
              RA      M   +L P+  T+  L++G  + G++  A   F HM +  + P++  Y 
Sbjct: 310 RSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYT 369

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +IDG+C+   + +A+S+ SEM+   + P   TY+ L+ G C V  L  A  L++ +   
Sbjct: 370 TMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSR 429

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           GI  N      LIDG+C+ G++ KA  +   M E G++P+V+T+S+LI+G C+   +   
Sbjct: 430 GITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHET 489

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             + + M    ++P+ V++T LI    K G +KE L+ + ++    +  +    ++L+H 
Sbjct: 490 KEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHA 549

Query: 444 LFKNGRISNALNF--FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            ++ G I+ A +F  ++ + +       S + V +  II + C+ G I+ A  ++ DM  
Sbjct: 550 FYREGMITEAEHFRQYMSRMN------ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVR 603

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               P+ CTY  +LRGL +   ++     ++ ++ +    D      ++ G    G L  
Sbjct: 604 YGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDE 663

Query: 562 AFR-CSEFLKES 572
           A   C + +K +
Sbjct: 664 ALDLCEKMIKNN 675



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 246/498 (49%), Gaps = 11/498 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           RK ++ P     N L+NG  ++GK +     +  M+   LV  V TY  +ID  C    +
Sbjct: 322 RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRI 381

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            KAL++  EM   G+ P+ + Y+ L++G C  + +  A  +   ++  G+  N      L
Sbjct: 382 DKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTIL 441

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DG+C+V ++++A +    M    + P+V+T+  L++G+C++ ++         M K G+
Sbjct: 442 IDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGI 501

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  LI  +CKAG + EA+    ++ +  +  +   +N L+      G +  AE 
Sbjct: 502 LPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEH 561

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
             Q M +  I  + V++N +ID YC  G++  A SV   M   G  PNV T+ +L+ G C
Sbjct: 562 FRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLC 621

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           + G++  A    + ++      D   F AL+ G+ + G + E L L ++M++    P + 
Sbjct: 622 QGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIH 681

Query: 436 TVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T + L+ G  + G+I  A   L   LEK          P+ V Y  ++  L  +GQ+  A
Sbjct: 682 TYTILLSGFCRKGKILPALVILQMMLEKG-------VVPDTVAYTCLLNGLINEGQVKAA 734

Query: 493 SKLFSDMR-SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           S +F ++   + L  D   Y +++ G L+++ +  +  +++DM +  + P++    +++ 
Sbjct: 735 SYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMH 794

Query: 552 GYQENGDLKSAFRCSEFL 569
           GY + G    +    +++
Sbjct: 795 GYVKRGQFSKSLYLYKYM 812



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 242/497 (48%), Gaps = 13/497 (2%)

Query: 75  YRKIE-VLPAIQAC--------NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +RK E +L  +++C        N +L+  +KKG+F +     E+M    + ADV TY ++
Sbjct: 242 FRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIM 301

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C      +A  L   M    + P    Y  LI+G   E K+  A  +F  M    +
Sbjct: 302 IDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNL 361

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           VP++ TY  ++DGYC+   +++AL    EM    + P+ +T+  L++G CKV  L  A  
Sbjct: 362 VPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIY 421

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               +   G+  N  +   LIDG C+ G + +A  +   M +  I PDV TY+ LI G+C
Sbjct: 422 LMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMC 481

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            + ++   + +L +M K GIL N V Y +LI  YCK G +++AL     +  +G+  N V
Sbjct: 482 RMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPV 541

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             ++L+    + G I  A      M   ++  D V F  +ID     GN+     +Y +M
Sbjct: 542 IHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDM 601

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +    +P+V T  +L+ GL + G +  A  F     D       + +   + A++  +C 
Sbjct: 602 VRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIP----FAIDEKTFNALLLGICR 657

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + +A  L   M  +N  PD  TYT +L G  R  ++L  +++L  M++ G+VPD V 
Sbjct: 658 YGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVA 717

Query: 546 NQVMVRGYQENGDLKSA 562
              ++ G    G +K+A
Sbjct: 718 YTCLLNGLINEGQVKAA 734



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 269/542 (49%), Gaps = 33/542 (6%)

Query: 50   FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLP-AI--QACNALLNGLIKKGKFDSVW 104
            ++P+V  +  L+    + GH+ +A      +  +P AI  +  NALL G+ + G  D   
Sbjct: 606  YSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEAL 665

Query: 105  EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
            +  E+M+    + D+ TY +L+   C +G ++ AL +   M++KG+ P  V YT L++GL
Sbjct: 666  DLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725

Query: 165  CNENKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
             NE ++  A  +F  +  +E G+  +   YN+LM+GY K  +VN       +M  + + P
Sbjct: 726  INEGQVKAASYVFHEIICKE-GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYP 784

Query: 223  NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
            N  ++ +LM G  K G+   +   + +M + G+ P+   Y  LI G  + G +  A+   
Sbjct: 785  NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 844

Query: 283  SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             +M    I PD   ++ILI       ++  A  +   M    +  +  T++++I+G  ++
Sbjct: 845  EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK 904

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
            G ++ +  V  +M + G++PN   + +L++ +C+ G ID A  L  EM    +VP  V  
Sbjct: 905  GYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAE 964

Query: 403  TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +++I GL + G ++E + ++  M+ + + P+V T ++L+H L K  +I++AL+       
Sbjct: 965  SSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHL------ 1018

Query: 463  KTDGGYCS--PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            K     C    + V Y  +I  LC D  I  A  L+ +M+S  L P+  TY T+   +  
Sbjct: 1019 KRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYS 1078

Query: 521  AKRMLDVMMLLADMIKMGIVP-------------DAVINQVMVRGYQENGDLKSAFRCSE 567
              R+ +   LL D+ + G++P             DA+I   M+R    N   +  FR  E
Sbjct: 1079 TGRVQNGEELLEDIEERGLIPAYKQPENLERRMEDAIIRLNMIR----NCRKEVPFRGVE 1134

Query: 568  FL 569
             L
Sbjct: 1135 LL 1136



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 233/467 (49%), Gaps = 9/467 (1%)

Query: 45   LEIP-KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
            L+IP   +   F+ L++     G ++EAL +  K+     LP I     LL+G  +KGK 
Sbjct: 637  LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI 696

Query: 101  DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTI 159
                   + M+  G+V D V Y  L++    +G V  A  +F E+I K G+    + Y  
Sbjct: 697  LPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNS 756

Query: 160  LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
            L++G      +   + M   M +  V PN  +YN LM GY K    +++L  Y  M+   
Sbjct: 757  LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 220  LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            ++P+ VT+ +L+ GL + G +  A  F   M   G+FP+  V++ LI    +   +  A+
Sbjct: 817  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 280  SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
             + + M+   +SP   T++ +I GL   G L+ +  +L +M + G+  N   Y +L++  
Sbjct: 877  QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 340  CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            C+ G++++A  +  +M   G+ P  V  SS+I G C+ G ++ A+ +++ M+   +VP V
Sbjct: 937  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996

Query: 400  VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
              FT L+  L K+  + + L L + M   ++   V + + LI GL K+  IS+AL+ + E
Sbjct: 997  ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGE 1056

Query: 460  KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
               K+ G +  PN   Y  +  A+   G++    +L  D+    L P
Sbjct: 1057 M--KSKGLW--PNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 211/426 (49%), Gaps = 6/426 (1%)

Query: 151 EPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +PT  V++ +L+     E K+++A      M +CG   +  + N +++   +  +     
Sbjct: 152 DPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVW 211

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
            F  E L       V T  +L++ LC  GE R A +    M    +  N   YN ++  +
Sbjct: 212 LFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHI-SNSVTYNTILHWY 270

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            K G    A+ +  +ME+  +  DV+TYNI+I  LC + +   A  LL++M K+ +  + 
Sbjct: 271 VKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDE 330

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            TYN+LI+G+ +EG +  A  V + M  + + P+V T++++IDG C+   ID A+ + +E
Sbjct: 331 CTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M I  ++P  + ++AL++G  K   +   + L +++    IT +    + LI G  + G 
Sbjct: 391 MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGE 450

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           IS A      K+   DG    P+ + Y+A+I  +C   ++ +  ++ S M+   + P++ 
Sbjct: 451 ISKAKQIL--KSMFEDG--IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 506

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            YTT++    +A  + + +    D+ + G+V + VI+  ++  +   G +  A    +++
Sbjct: 507 LYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYM 566

Query: 570 KESRIG 575
               I 
Sbjct: 567 SRMNIS 572



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 132/324 (40%), Gaps = 44/324 (13%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEK--FEISPDVFTYNILIKGLCGVGQLEGAEG 315
           N  V+  L+  + K   + +A      M+   F+ SP   + N ++  L   G+ +    
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASP--VSCNTILNALVEEGESKHVWL 212

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L++         V T N L++  C  G+  KA  +  +M    +  N VT+++++    
Sbjct: 213 FLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYV 271

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G   AA+ +  +M   S+  DV  +  +ID L +         L K M +  +TP   
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI+G            FF E                           G+I  A  +
Sbjct: 332 TYNTLING------------FFRE---------------------------GKINHARYV 352

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F+ M   NL P   TYTTM+ G  R +R+   + +L++M   G++P  +    ++ GY +
Sbjct: 353 FNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCK 412

Query: 556 NGDLKSAFRCSEFLKESRIGSSET 579
              L  A    E LK   I  ++T
Sbjct: 413 VSMLGPAIYLMEDLKSRGITINKT 436


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 254/549 (46%), Gaps = 47/549 (8%)

Query: 52  PSVFSTLII--AFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKGKFDSV 103
           P VFS  I+     +    +EAL +       R     P + +   ++NG  K+G  D  
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +  Y EM+   +  DVVTY  +I   C    + KA+ +   M+  G+ P  + Y  ++HG
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C+  +  EA    + MR  GV P++ TYN+LMD  CK      A + +  M    L+P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + T+  L+ G    G L         M + G+ P+  V+N LI  + K   + EAM + S
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY----------- 332
           +M +  ++P+V TY  +I  LC  G ++ A    ++M  EG+  N++ Y           
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 333 ------------------------NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
                                   NS+I  +CKEG + ++  +   M   GV+PNV+T+S
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LIDG C AG +D A  L + M    + PD V +  LI+G  +   M + L L+KEM+ +
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            ++P++ T + ++ GLF   R + A   ++  T        S     Y  I+  LC +  
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST----YNIILHGLCKNNL 631

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
             +A ++F ++   +L+ +  T+  M+  LL+  R  +   L A +   G+VPD     +
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691

Query: 549 MVRGYQENG 557
           M     E G
Sbjct: 692 MAENLIEQG 700



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 233/479 (48%), Gaps = 42/479 (8%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQG 133
           ++  +P + +C  LL GL  + +     E    M      G   DVV+Y  +I+    +G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D  KA + + EM+D+ I P VV Y+ +I  LC    M +A  +  +M + GV+PN  TYN
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           +++ GYC       A+ F  +M    ++P+VVT+  LMD LCK G    A   F  M K 
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P+I  Y  L+ G+   G L E  +L   M +  I PD   +NILI       +++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  KM + G+  NVVTY ++I   CK G ++ A+    QM ++G+ PN++ ++SLI  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C     D A  L  EM+ + +  + + F ++I    K+G + E+ +L+  M+   + P+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T S+LI G                                        C  G++ +A+
Sbjct: 511 VITYSTLIDG---------------------------------------YCLAGKMDEAT 531

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           KL S M S  ++PD  TY T++ G  R  RM D + L  +M+  G+ P+ +   ++++G
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 234/489 (47%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE------------ 151
           Y  M   G   +   V TYG+LI CCC  G +         ++ KG              
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 152 ------------------------PTVVIYTILIHGLCNENKMVEAESMFRSM---RECG 184
                                   P V   TIL+ GLC+EN+  EA  +   M   R  G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             P++ +Y  +++G+ K  D ++A   YHEML   + P+VVT+  ++  LCK   +  A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M K GV PN   YN ++ G+C +    EA+    +M    + PDV TYN L+  L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G+   A  +   M K G+  ++ TY +L+ GY  +G + +  ++   M   G+ P+ 
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             F+ LI    K   +D AM ++++M    L P+VV + A+I  L K G++ + +  +++
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  +TP++   +SLIH L    +   A    LE  D+   G C  N + + +II + C
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR---GIC-LNTIFFNSIIHSHC 487

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++P+  TY+T++ G   A +M +   LL+ M  +G+ PD V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 548 TYNTLINGY 556



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 257/526 (48%), Gaps = 23/526 (4%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           + +P V  +S++I A  +   +++A+ V     K  V+P     N++L+G     +    
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEA 285

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
             F ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G+EP +  Y  L+ G
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
              +  +VE  ++   M   G+ P+ + +N L+  Y K   V+ A+  + +M  H L PN
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+G ++  LCK G +  A  +F  M   G+ PNI VY  LI   C      +A  L  
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    I  +   +N +I   C  G++  +E L   M + G+  NV+TY++LIDGYC  G
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            M++A  + S M   G++P+ VT+++LI+G C+   +D A+ L+ EMV   + P+++ + 
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF------ 457
            ++ GL           LY  + ++     + T + ++HGL KN     AL  F      
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645

Query: 458 -LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            L+   +T           +  +I AL   G+  +A  LF+ + ++ L PD  TY+ M  
Sbjct: 646 DLQLETRT-----------FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L+    + ++  L   M + G   ++ +   +VR   + GD+  A
Sbjct: 695 NLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 73/390 (18%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+ LI A+++   ++EA+ V+ K+    + P +    A++  L K G  D    ++E+M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 111 VLCGLVADVVTYGVLIDCCC-----------------------------------GQGDV 135
           +  GL  +++ Y  LI   C                                    +G V
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +++  LFD M+  G++P V+ Y+ LI G C   KM EA  +  SM   G+ P+  TYN L
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           ++GYC+V+ ++ AL  + EM+   + PN++T+ +++ GL       AA   +V + K G 
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612

Query: 256 FPNIFVYNCLIDGHCK-----------------------------------AGNLFEAMS 280
              +  YN ++ G CK                                    G   EA  
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L + +    + PDV TY+++ + L   G LE  + L   M + G  AN    NS++    
Sbjct: 673 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 732

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + GD+ +A +  S + EK       T S L
Sbjct: 733 QRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 3/255 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +STLI  +   G ++EA   L     + + P     N L+NG  +  + D    
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EMV  G+  +++TY +++           A  L+  +   G +  +  Y I++HGLC
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             N   EA  MF+++    +     T+N ++    KV   + A + +  +  + L P+V 
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 687

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ ++ + L + G L    + F+ M + G   N  + N ++    + G++  A +  S +
Sbjct: 688 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMI 747

Query: 286 EKFEISPDVFTYNIL 300
           ++   S +  T ++L
Sbjct: 748 DEKHFSLEASTASLL 762



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 422 YKEMLEA---KITPSVFTVSSLIHGLFKNGRIS---NALNFFLEKTDKTDGGYCSPNHVL 475
           Y  M  A   K+TP+V T   LI    + GR+     AL   ++K  + +        + 
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEA-------IT 124

Query: 476 YAAIIQALCYDGQILKASKL-FSDMRSDNLRPDNCTYTTMLRGLL---RAKRMLDVMMLL 531
           +  +++ LC D +   A  +    M   +  PD  + T +L+GL    R++  L+++ ++
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           AD    G  PD V    ++ G+ + GD   A+     + + RI
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 280/631 (44%), Gaps = 106/631 (16%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI-----E 79
           +L   K H     + N + S  I K   S   +++  F++  HI++A   ++ +     E
Sbjct: 48  ILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPE 107

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P++   N LL   IK+ + + V   Y++MVLCG+     T+ +LI   C    V  A 
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167

Query: 140 NLFDEM------------------------IDKGIE-----------PTVVIYTILIHGL 164
            LFDEM                         DKG+E           P  VIY  ++   
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM-LHHNL--- 220
           C E +  ++E M   MRE G+VP++ T+N+ +   CK   V  A   + +M L   L   
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFF----------------------VHMAKF----- 253
           +PN +T+ +++ G CKVG L  A   F                      V   KF     
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 254 --------GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
                   G+ P+I+ YN L+DG CK G L +A ++   M++  + PD  TY  L+ G C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            VG+++ A+ LLQ+M +   L N  T N L+    K G + +A  +  +M EKG   + V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 366 TFSSLIDGQCKAGNIDAAMGL------------------YTEMVIKSLV-----PDVVVF 402
           T + ++DG C +G +D A+ +                  Y  +V  SL+     PD++ +
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + L++GL K G   E   L+ EM+  K+ P     +  IH   K G+IS+A     +   
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K     C  +   Y ++I  L    QI +   L  +M+   + P+ CTY T ++ L   +
Sbjct: 588 KG----CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           ++ D   LL +M++  I P+    + ++  +
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 229/473 (48%), Gaps = 31/473 (6%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V  Y +L++ C  +  V     L+ +M+  GI P    + +LI  LC+ + +  A  +F 
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFD 171

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M E G  PN +T+  L+ GYCK    ++ LE  + M    + PN V +  ++   C+ G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI----SPDV 294
               +      M + G+ P+I  +N  I   CK G + +A  + S+ME  E      P+ 
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN+++KG C VG LE A+ L + + +   LA++ +YN  + G  + G   +A +V  Q
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MT+KG+ P++ +++ L+DG CK G +  A  +   M    + PD V +  L+ G    G 
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +     L +EM+     P+ +T + L+H L+K GRIS A     +  +K   GY   + V
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK---GY-GLDTV 467

Query: 475 LYAAIIQALCYDGQILKASKLFSDMR-----------------------SDNLRPDNCTY 511
               I+  LC  G++ KA ++   MR                        +N  PD  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +T+L GL +A R  +   L A+M+   + PD+V   + +  + + G + SAFR
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 259/609 (42%), Gaps = 95/609 (15%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   F  L+  + + G  ++ L +   +E   VLP     N +++   ++G+ D   +
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGI---EPTVVIYTILI 161
             E+M   GLV D+VT+   I   C +G V+ A  +F +M +D+ +    P  + Y +++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    + +A+++F S+RE   + +L +YN  + G  +      A     +M    + 
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++ ++ +LMDGLCK+G L  A      M + GV P+   Y CL+ G+C  G +  A SL
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM +    P+ +T NIL+  L  +G++  AE LL+KM ++G   + VT N ++DG C 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 342 EGDMEKALSVCSQMTEKGVE-----------------------PNVVTFSSLIDGQCKAG 378
            G+++KA+ +   M   G                         P+++T+S+L++G CKAG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 379 NIDAAMGLYTEMVIKSLVPDVV-----------------------------------VFT 403
               A  L+ EM+ + L PD V                                    + 
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +LI GL     + E   L  EM E  I+P++ T ++ I  L +  ++ +A N   E   K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658

Query: 464 ------------------------------TDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
                                         T    C     LY+ +   L   GQ+LKA+
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L   +           Y  ++  L +   +     +L  MI  G   D      ++ G 
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778

Query: 554 QENGDLKSA 562
            + G+ K A
Sbjct: 779 GKMGNKKEA 787



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 198/408 (48%), Gaps = 13/408 (3%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++Y YN L++   K   V      Y +M+   + P   TF +L+  LC    + AA   
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + G  PN F +  L+ G+CKAG   + + L + ME F + P+   YN ++   C 
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV----EP 362
            G+ + +E +++KM +EG++ ++VT+NS I   CKEG +  A  + S M          P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N +T++ ++ G CK G ++ A  L+  +     +  +  +   + GL + G   E   + 
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQ 481
           K+M +  I PS+++ + L+ GL K G +S+A     L K +    G C P+ V Y  ++ 
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN----GVC-PDAVTYGCLLH 404

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G++  A  L  +M  +N  P+  T   +L  L +  R+ +   LL  M + G   
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
           D V   ++V G   +G+L  A    E +K  R+  S   G+   S++G
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAI---EIVKGMRVHGSAALGNLGNSYIG 509



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 213/542 (39%), Gaps = 140/542 (25%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
           L +P+ N   ++ ++  F ++G +E+A  ++  I   + L ++Q+ N  L GL++ GKF 
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343

Query: 102 SVWEFYEEMV-----------------LC------------------GLVADVVTYGVLI 126
                 ++M                  LC                  G+  D VTYG L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C  G V  A +L  EM+     P      IL+H L    ++ EAE + R M E G  
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHH-----------------------NLQPN 223
            +  T N ++DG C   ++++A+E    M  H                       N  P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++T+  L++GLCK G    A N F  M    + P+   YN  I   CK G +  A  +  
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583

Query: 284 EMEK-----------------------FEI------------SPDVFTYNILIKGLCGVG 308
           +MEK                       FEI            SP++ TYN  I+ LC   
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM-------EKALSVCSQ------- 354
           ++E A  LL +M ++ I  NV ++  LI+ +CK  D        E A+S+C Q       
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703

Query: 355 --------------------MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
                               + ++G E     +  L++  CK   ++ A G+  +M+ + 
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA--------KITPSVFTVSSLIHGLFK 446
              D      +IDGL K GN KE      +M+E         K+ P+   +    H   K
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHN--K 821

Query: 447 NG 448
           NG
Sbjct: 822 NG 823



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 128/274 (46%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           E  P V+ YN+L++      ++E    L + M   GI     T+N LI   C    ++ A
Sbjct: 107 ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M EKG +PN  TF  L+ G CKAG  D  + L   M    ++P+ V++  ++  
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             ++G   ++ ++ ++M E  + P + T +S I  L K G++ +A   F +       G 
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN + Y  +++  C  G +  A  LF  +R ++      +Y   L+GL+R  + ++  
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +L  M   GI P      +++ G  + G L  A
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 261/528 (49%), Gaps = 33/528 (6%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           L +AF+ +G I +       I   P ++   A      +K   D++          G   
Sbjct: 29  LNLAFAALGQIIKTGLRANAISFTPILRTLCA------EKRTSDAMNIVIRWTPKLGCTP 82

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAES 175
           DV +Y VL+   C +    +A++L   M + G    P VV YT +IHG   E+++ +A +
Sbjct: 83  DVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYT 142

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +F  M + G+ P++ T N+++DG CKV  +++A E   +M   ++ P+  T+  L+ G  
Sbjct: 143 LFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYL 202

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G+L+ A      M++ G  PN   Y+ LID  CK G   EA  + + M +   +P+V 
Sbjct: 203 SSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVA 262

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  L+ G    G L     L+  M + G+  +   +N  I  Y K G +++A+   ++M
Sbjct: 263 TYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKM 322

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            ++G+ P+++++ ++IDG CK G +DAAM  + +M+   L PD+VVFT LI G S  G  
Sbjct: 323 RQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKW 382

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++   L+ EM++  I P+V   +++I  LFK G+++ A   F    D        PN V 
Sbjct: 383 EKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF----DLMPIASVKPNVVS 438

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y AII      G++ +  KL  DM S  L+P+  T+ T                LL DM+
Sbjct: 439 YNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT----------------LLDDML 482

Query: 536 KMGIVPDAVINQVMVRGYQENG---DLKSAFRCSEFLKESRIGSSETE 580
            MG+ PD      ++    E+G   D+ + FR  E L ++    + TE
Sbjct: 483 SMGLKPDVATCNTLIDSCCEDGRIEDVLTLFR--EMLSKAAKTDTVTE 528



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 231/475 (48%), Gaps = 22/475 (4%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG--LVADVVTYGVLIDCCCGQGD 134
           K+   P + +   LL GL  + K +   +    M   G     +VV+Y  +I     + +
Sbjct: 77  KLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDE 136

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           V KA  LF EM+D+GI P VV    +I GLC    M +AE + R M +  ++P+  TYN+
Sbjct: 137 VGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNS 196

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ GY     +  A+    +M  H   PN VT+ +L+D LCK G    A      M +  
Sbjct: 197 LVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSR 256

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN+  Y  L+ G+   G+L E  +L   M +  + PD   +NI I      G+L+ A 
Sbjct: 257 GNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAM 316

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               KM ++G++ ++++Y ++IDG CK G ++ A+S   QM + G+ P++V F++LI G 
Sbjct: 317 LTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGF 376

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
              G  + A  L+ EM+ + + P VVVFT +ID L K+G + E   L+  M  A + P+V
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNV 436

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            + +++IHG F  G++   L       D    G   PN V +                + 
Sbjct: 437 VSYNAIIHGYFLAGKLDEVLKLL---DDMLSVGL-KPNAVTF----------------NT 476

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           L  DM S  L+PD  T  T++       R+ DV+ L  +M+      D V   ++
Sbjct: 477 LLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 213/449 (47%), Gaps = 7/449 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM-F 177
            VTY +LI CCC  G +  A     ++I  G+    + +T ++  LC E +  +A ++  
Sbjct: 13  TVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVI 72

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNVVTFGVLMDGLC 235
           R   + G  P++++Y  L+ G C       A++  H M     +  PNVV++  ++ G  
Sbjct: 73  RWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFF 132

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K  E+  A   F  M   G+ P++   N +IDG CK   + +A  +  +M    I PD  
Sbjct: 133 KEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCT 192

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN L+ G    GQL+ A  +L++M + G   N VTY+ LID  CK G   +A  + + M
Sbjct: 193 TYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSM 252

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            +    PNV T+  L+ G    G++     L   MV   + PD  +F   I    K G +
Sbjct: 253 IQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRL 312

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E +  + +M +  + P + +  ++I GL K GR+  A++ F +  D  DG   SP+ V+
Sbjct: 313 DEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMID--DG--LSPDIVV 368

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +  +I      G+  KA +LF +M    +RP    +TTM+  L +  ++ +   L   M 
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              + P+ V    ++ GY   G L    +
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLK 457



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 179/384 (46%), Gaps = 13/384 (3%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V P   TY  L+   C V  +N A     +++   L+ N ++F  ++  LC       A 
Sbjct: 9   VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68

Query: 245 NFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM--EKFEISPDVFTYNILI 301
           N  +    K G  P++F Y  L+ G C      EA+ L   M  +     P+V +Y  +I
Sbjct: 69  NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G     ++  A  L  +M   GI  +VVT NS+IDG CK   M+KA  V  QM +K + 
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+  T++SL+ G   +G +  A+ +  +M      P+ V ++ LID L K G   E   +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNG---RISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
              M++++  P+V T   L+HG    G    ++N ++  ++   +       P+H ++  
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVR-------PDHHIFNI 301

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            I A    G++ +A   F+ MR   L PD  +Y TM+ GL +  R+   M     MI  G
Sbjct: 302 QIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDG 361

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
           + PD V+   ++ G+   G  + A
Sbjct: 362 LSPDIVVFTNLIHGFSMYGKWEKA 385



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 42/313 (13%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN-------------------- 328
           +++P   TY ILI   C VG L  A   L ++ K G+ AN                    
Sbjct: 8   KVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDA 67

Query: 329 ----------------VVTYNSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNVVTFSSL 370
                           V +Y  L+ G C E   E+A+ +   M E G    PNVV+++++
Sbjct: 68  MNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTV 127

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G  K   +  A  L+ EM+ + + PDVV   ++IDGL K   M +   + ++M +  I
Sbjct: 128 IHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHI 187

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P   T +SL+HG   +G++  A+    + +         PN V Y+ +I  LC  G   
Sbjct: 188 MPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQ----PPNGVTYSMLIDCLCKFGGHT 243

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A ++ + M      P+  TY  +L G      ++++  L+  M++ G+ PD  I  + +
Sbjct: 244 EAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQI 303

Query: 551 RGYQENGDLKSAF 563
             Y + G L  A 
Sbjct: 304 YAYVKCGRLDEAM 316



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           K V P  VT++ LI   C  G ++ A     +++   L  + + FT ++  L  +    +
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 418 TLRLY-KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
            + +  +   +   TP VF+ + L+ GL    +   A++      +  DG +C PN V Y
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAE--DGDHCPPNVVSY 124

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I     + ++ KA  LF +M    + PD  T  +++ GL + + M     +L  M  
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFR 564
             I+PD      +V GY  +G LK A R
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVR 212


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 243/473 (51%), Gaps = 22/473 (4%)

Query: 12  KNARCLIKDVTENLLKSRKPHHVCYSVF--------------NALNSLEIPKFNPSV--F 55
           + AR L+ D++     + +P+ V Y+                  L S++       V  +
Sbjct: 102 RQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTY 161

Query: 56  STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
            TLI    +   ++ AL +  ++    V P +   + LL G  + G++  V + +E+M  
Sbjct: 162 GTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSR 221

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  DV+ +  LID  C +G   KA  + D M+ +G+EP VV Y +LI+ LC E  + E
Sbjct: 222 RGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVRE 281

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVL 230
           A ++ + M + GV P++ TYN L+ G   V +++ A+ F  EM+  +  ++P+VVTF  +
Sbjct: 282 ALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSV 341

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK+G +  A      MA+ G   N+  YN LI G  +   +  AM+L  E+    +
Sbjct: 342 IHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGL 401

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD FTY+ILI G   + +++ AE  L  M + GI A +  Y  L+   C++G ME+A+ 
Sbjct: 402 EPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMG 461

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M +K    + + +S++I G CK+G++     L  +M+ + L PD V ++ LI+  +
Sbjct: 462 LFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYA 520

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           K G+++E  R+ K+M  +   P V    SLI G    G+    L    E   K
Sbjct: 521 KLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 254/506 (50%), Gaps = 32/506 (6%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G  + A  + R++   P  +AC+ LL+ L                     V D V+Y  +
Sbjct: 50  GRADAAALLNRRLRGAPVTEACS-LLSALPD-------------------VRDAVSYNTV 89

Query: 126 IDCCCGQG--DVMKALNLFDEMIDKG---IEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           +   C +G   + +A +L  +M  +      P  V YT ++ GLC   +  EA ++ RSM
Sbjct: 90  LAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSM 149

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           +  GV  ++ TY  L+ G C  ++++ ALE   EM    +QPNVV +  L+ G C+ G  
Sbjct: 150 QASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRW 209

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
           +  G  F  M++ G+ P++ ++  LID  CK G   +A  +   M +  + P+V TYN+L
Sbjct: 210 QDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVL 269

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG- 359
           I  LC  G +  A  L ++M  +G+  +VVTYN+LI G     +M++A+S   +M +   
Sbjct: 270 INSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDT 329

Query: 360 -VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            VEP+VVTF+S+I G CK G +  A+ +   M  +  + ++V +  LI G  +   +K  
Sbjct: 330 VVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMA 389

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L  E+  + + P  FT S LI+G  K   +  A  F    T +  G      H  Y  
Sbjct: 390 MNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLC--TMRQRGIKAELFH--YIP 445

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++ A+C  G + +A  LF++M   N   D   Y+TM+ G  ++  M  V  L+ DM+  G
Sbjct: 446 LLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEG 504

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFR 564
           + PDAV   +++  Y + GDL+ A R
Sbjct: 505 LAPDAVTYSMLINMYAKLGDLEEAER 530



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 187/396 (47%), Gaps = 41/396 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+S L+  +   G  ++   V+  +    + P +     L++ L K+GK     +  
Sbjct: 192 NVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVK 251

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI------ 161
           + MV  GL  +VVTY VLI+  C +G V +AL L  EM DKG+ P VV Y  LI      
Sbjct: 252 DMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGV 311

Query: 162 -------------------------------HGLCNENKMVEAESMFRSMRECGVVPNLY 190
                                          HGLC   +M +A  +   M E G + NL 
Sbjct: 312 LEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLV 371

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+ G+ +V  V  A+    E+    L+P+  T+ +L++G  K+ E+  A  F   M
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G+   +F Y  L+   C+ G +  AM L +EM+K     D   Y+ +I G C  G +
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDM 490

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           +  + L+Q M  EG+  + VTY+ LI+ Y K GD+E+A  V  QMT  G  P+V  F SL
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           I G    G  D  + L  EM  K++  D  + + +I
Sbjct: 551 IKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 39/288 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
            ++TLI   S +  ++EA+    ++      V P +   N++++GL K G+     +  E
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M   G + ++VTY  LI        V  A+NL DE+   G+EP    Y+ILI+G     
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419

Query: 169 KMVEAESMFRSMRECGVVPNLY----------------------------------TYNA 194
           ++  AE    +MR+ G+   L+                                   Y+ 
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYST 479

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++ G CK  D+    +   +ML   L P+ VT+ +L++   K+G+L  A      M   G
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
             P++ V++ LI G+   G   + + L  EM    ++ D    + +I+
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 252/513 (49%), Gaps = 40/513 (7%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            A++  L K GK D+ +E   E+   GL   VVTY VL+D  C  G V +A  L   M  
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 284

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+ P+VV + ILI+GL    +  E   + + M + GV PN   YN L+  +C+    ++
Sbjct: 285 GGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQ 344

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF---------VH--------- 249
           AL  + EM+   ++P  VT+ ++   LCK GE+  A             VH         
Sbjct: 345 ALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVA 404

Query: 250 ------------------MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
                             M   G+ PN  +    +   CK G   EA+ +  +     + 
Sbjct: 405 WLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLG 464

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            ++ T N LI GLC    ++ A  ++Q M  +GI  + +TYN +I G CK+  ME+A+ +
Sbjct: 465 VNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL 524

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              MT +G +P++ TF++L+   C  G ++    L  +M  + L PD+V +  +IDG  K
Sbjct: 525 HGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 584

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             ++++      E+++  + P+VF  ++LI G  +NG IS A++    +T K++G    P
Sbjct: 585 AKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV--ETMKSNG--IQP 640

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
            +V Y +++  +C+ G + +A  +FS  R +N+      YT M++G  +  +M++ +   
Sbjct: 641 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 700

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +M   GI P+ +    ++  Y ++G+ + A +
Sbjct: 701 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 733



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 255/519 (49%), Gaps = 12/519 (2%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           F  L  L      P+V  ++ L+ A  + G +EEA  +  ++E   + P++     L+NG
Sbjct: 241 FEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILING 300

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L +  +F  V    +EM   G+  + V Y  LI   C +G   +AL LFDEM+ K ++PT
Sbjct: 301 LARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPT 360

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC-KVADVNRALEFY 212
            V Y ++   LC E +M  AE +   M   G+  +   +N ++     +   +   +   
Sbjct: 361 AVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSIT 420

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           +EM+   ++PN       M  LCK G+ + A   +      G+  N+   N LI G C+ 
Sbjct: 421 NEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEG 480

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + EA  +   M    I  D  TYNI+I+G C   ++E A  L   M + G   ++ T+
Sbjct: 481 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 540

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+L+  YC  G ME+   +  QM  +G++P++V++ ++IDG CKA +I  A    TE++ 
Sbjct: 541 NTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD 600

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + L P+V ++ ALI G  ++G++   +   + M    I P+  T  SL++ +   G +  
Sbjct: 601 RGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEE 660

Query: 453 ALNFFLE-KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
           A   F + + +  D G      + Y  +IQ  C  G++++A   F +MRS  + P+  TY
Sbjct: 661 AKTIFSQARENNVDLGV-----IGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTY 715

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           TT++    ++    +   L  +M+  G++PD +    ++
Sbjct: 716 TTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 231/494 (46%), Gaps = 39/494 (7%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I+ CNA L  L++ G+ D+  E ++EM     VA                     LN 
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVA---------------------LNE 221

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           +              YT +I  LC   K+     M   +   G+ P + TYN LMD  CK
Sbjct: 222 YS-------------YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCK 268

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V  A      M    + P+VVTFG+L++GL +       G     M + GV PN  +
Sbjct: 269 SGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI 328

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI  HC+ G+  +A+ L  EM   ++ P   TYN++ K LC  G++E AE +L+ M 
Sbjct: 329 YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDML 388

Query: 322 KEGILANVVTYNSLIDGYCKEG-DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             G+  +   +N+++    +    +E  +S+ ++M  +G+ PN    ++ +   CK G  
Sbjct: 389 SIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKH 448

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+G++ + + K L  ++    ALI GL +   MKE  ++ + ML   I     T + +
Sbjct: 449 QEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIM 508

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  K+ ++  A+       D T  G+  P+   +  ++ A C  G++ +   L   M+
Sbjct: 509 IRGCCKDSKMEEAIKLH---GDMTRRGF-KPDLFTFNTLLHAYCNLGKMEETFHLLDQMK 564

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           ++ L+PD  +Y T++ G  +AK +      L +++  G+ P+  I   ++ GY  NGD+ 
Sbjct: 565 TEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDIS 624

Query: 561 SAFRCSEFLKESRI 574
            A    E +K + I
Sbjct: 625 GAIDAVETMKSNGI 638



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 223/472 (47%), Gaps = 8/472 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++ LI      GH  +AL ++ ++   ++ P     N +   L K+G+ +      
Sbjct: 325 NEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL 384

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCN 166
           E+M+  G+      +  ++     +   ++++ ++ +EM+ +G+ P   + T  +  LC 
Sbjct: 385 EDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCK 444

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  EA  ++      G+  NL T NAL+ G C+   +  A +    ML+  ++ + +T
Sbjct: 445 GGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSIT 504

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +++ G CK  ++  A      M + G  P++F +N L+  +C  G + E   L  +M+
Sbjct: 505 YNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMK 564

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD+ +Y  +I G C    +  A+  L ++   G+  NV  YN+LI GY + GD+ 
Sbjct: 565 TEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDIS 624

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A+     M   G++P  VT+ SL+   C AG ++ A  ++++    ++   V+ +T +I
Sbjct: 625 GAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMI 684

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            G  K G M E +  ++EM    I+P+  T ++L++   K+G    A   F    D+  G
Sbjct: 685 QGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLF----DEMVG 740

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
               P+++ Y  +I        + K     +++ S  L  D+  Y  +  G+
Sbjct: 741 SGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGI 792



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 170/334 (50%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           +   NAL++GL +        +  + M+  G+  D +TY ++I  CC    + +A+ L  
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 526

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M  +G +P +  +  L+H  CN  KM E   +   M+  G+ P++ +Y  ++DG+CK  
Sbjct: 527 DMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK 586

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           D+ +A E+  E++   L+PNV  +  L+ G  + G++  A +    M   G+ P    Y 
Sbjct: 587 DIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+   C AG + EA ++ S+  +  +   V  Y I+I+G C +G++  A    ++M   
Sbjct: 647 SLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSR 706

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           GI  N +TY +L+  Y K G+ E+A  +  +M   GV P+ +T+ +LI    +  ++D  
Sbjct: 707 GISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKD 766

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G   E+   +L  D  ++  L +G++     KE
Sbjct: 767 IGHTAELSSGALTKDDRMYNILSNGINAPWCQKE 800



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 40/235 (17%)

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM----------- 390
           +G + +A      ++ +G  P++ T ++ ++   +AG +DAA  ++ EM           
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 391 ----VIKSLV---------------------PDVVVFTALIDGLSKDGNMKETLRLYKEM 425
               +IK+L                      P VV +  L+D L K G ++E  RL   M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            +  +TPSV T   LI+GL +  R    +   L++ ++      SPN V+Y  +I   C 
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGE-VGIVLQEMEQLG---VSPNEVIYNELIGWHCR 338

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            G   +A +LF +M    ++P   TY  + + L +   M     +L DM+ +G+ 
Sbjct: 339 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 393


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 271/593 (45%), Gaps = 72/593 (12%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEM--GHIEEALWVYRKIEVL---PAIQACN 88
           + +S F +  S ++P   P V+   ++  S +    ++   W+Y+ + V    P     N
Sbjct: 97  LAFSQFQSFRS-QVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLN 155

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L+ GL   G+F+   E +++M + G   +  ++G+L+   C  G  M+AL L D M   
Sbjct: 156 LLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSF 215

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G++P  VIY  LI   C E +  EAE +   MRE G+ P++ T+N+ +   C    +  A
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA 275

Query: 209 LEFYHEM-LHHNL---QPNVVTFGVLMDGLCKVGELRAA----------GNF-------- 246
              + +M +   L   +PN+ TF ++++G CK G L  A          GN         
Sbjct: 276 SRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNI 335

Query: 247 -----------------FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
                               M   G+ PNI+ +N ++DG CK G + +A  +   M    
Sbjct: 336 WLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSG 395

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PD  TY+ L+ G C  G++  A  +L +M + G   N  T N L+    KEG + +A 
Sbjct: 396 IGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAE 455

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI----------------- 392
            +  +M E+  + + VT + +IDG CK+G +D A+ +   M I                 
Sbjct: 456 KLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLV 515

Query: 393 ------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
                 K  +PD++ ++ +I+GL K G + E  + + EM+   + P      + IH   K
Sbjct: 516 DSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCK 575

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           +G+IS+A     +   +     C+ +   Y ++I  L    QI +   L  DM+   + P
Sbjct: 576 HGKISSAFRVLKDMEKRG----CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITP 631

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           + CTY  M+  L    R+ D   LL +M++ GI P+    +++++ + +  D 
Sbjct: 632 NICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDF 684



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 228/473 (48%), Gaps = 31/473 (6%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V  Y ++++    +  V     L+ +M+  G+ P      +LI GLC+  +  +A  +F 
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G  PN +++  L+ GYC+     RALE    M    +QPN V +  L+   C+ G
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREG 235

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE----ISPDV 294
               A      M + G+FP++  +N  I   C AG + EA  +  +M+  E      P++
Sbjct: 236 RNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNI 295

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N++++G C  G LE A+ L++ M + G L  + +YN  + G  + G + +A     +
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M +KG+EPN+ +F++++DG CK G I  A  +   M+   + PD V ++ L+ G    G 
Sbjct: 356 MVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + +   +  EM+    +P+ +T + L+H L+K GRI  A     +  +++       ++V
Sbjct: 416 VLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERS----YDLDNV 471

Query: 475 LYAAIIQALCYDGQILKASKLFSDM--------------------RSDNLR---PDNCTY 511
               +I  LC  G++ +A ++   M                     S N +   PD  TY
Sbjct: 472 TCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITY 531

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           + ++ GL +A R+ +      +M+   + PD++I    +  + ++G + SAFR
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFR 584



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 203/441 (46%), Gaps = 28/441 (6%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I + N +++GL K G           M+  G+  D VTY  L+  CC  G V+KA N+
Sbjct: 363 PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNI 422

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM+ +G  P      IL+H L  E ++ EAE + + M E     +  T N ++DG CK
Sbjct: 423 LHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCK 482

Query: 202 VADVNRALEFYHEMLHH------NLQ-----------------PNVVTFGVLMDGLCKVG 238
              ++ A+E    M  H      NL                  P+++T+ ++++GLCK G
Sbjct: 483 SGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAG 542

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            L  A   F+ M    + P+  +Y+  I   CK G +  A  +  +MEK   +  + TYN
Sbjct: 543 RLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYN 602

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI GL    Q+    GLL  M ++GI  N+ TYN++I   C+ G ++ A S+  +M +K
Sbjct: 603 SLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQK 662

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN+ +F  LI   CKA +      ++ E+ +        +++ + + L   G + E 
Sbjct: 663 GISPNISSFRLLIKAFCKASDFGVVKEVF-EIALSICGHKEALYSLMFNELLIGGEVSEA 721

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             L+   L+       F  + LI  L K+  + NA +   +  DK   GY   +   +  
Sbjct: 722 KELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDK---GY-RFDPASFMP 777

Query: 479 IIQALCYDGQILKASKLFSDM 499
           +I  L   G+   A +L   M
Sbjct: 778 VIDGLGKRGKKHDADELAERM 798



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 201/423 (47%), Gaps = 13/423 (3%)

Query: 173 AESMFRSMRE--CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           A S F+S R       P +Y YN +++   +   V+     Y +M+   + P   T  +L
Sbjct: 98  AFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLL 157

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLC  G    A   F  M   G  PN F +  L+ G+C+AG    A+ L   M  F +
Sbjct: 158 IAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGV 217

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+   YN LI   C  G+ E AE L+++M ++G+  +VVT+NS I   C  G + +A  
Sbjct: 218 QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASR 277

Query: 351 VCSQMT---EKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +   M    E G+  PN+ TF+ +++G CK G ++ A  L   M     + ++  +   +
Sbjct: 278 IFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWL 337

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GL ++G + E     KEM++  I P++++ ++++ GL KNG IS+A            G
Sbjct: 338 LGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIG 397

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ V Y+ ++   C  G++LKA+ +  +M      P+  T   +L  L +  R+ +
Sbjct: 398 ----PDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
              LL  M +     D V   +++ G  ++G L  A    E ++   I  S   G+   S
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV---EIVEGMWIHGSAALGNLGNS 510

Query: 587 FLG 589
           F+G
Sbjct: 511 FIG 513



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 25/293 (8%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP +   + ++NGL K G+ D   + + EMV   L  D + Y   I   C  G +  A  
Sbjct: 525 LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFR 584

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M  +G   ++  Y  LI GL ++N++ E   +   M+E G+ PN+ TYN ++   C
Sbjct: 585 VLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLC 644

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   +  A     EML   + PN+ +F +L+   CK  +             FGV   +F
Sbjct: 645 EGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD-------------FGVVKEVF 691

Query: 261 VYNCLIDGHCKA--GNLFEAMSLCSEM----EKFEISPDV------FTYNILIKGLCGVG 308
                I GH +A    +F  + +  E+    E F+ + D       F YN LI+ LC   
Sbjct: 692 EIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDE 751

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            LE A  +L KM  +G   +  ++  +IDG  K G    A  +  +M +   E
Sbjct: 752 MLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/523 (30%), Positives = 267/523 (51%), Gaps = 14/523 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++  I A+ E  +++ A  +  ++E   V  +    N L+ GL K  +     E    M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ AD VTY  L+   C   ++  AL +  +MI  G  P+    + +I  L  +  +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   + + G+VPN++ YNAL+D  CK    + A   + EM    L+PN VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A   F  M   G+   ++ YN LI+G+CK G+L  A  L S M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P   +Y+ LI GLC  G L     L ++M + GI  N  T+ +LI+G+CK+  M++A  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +  V PN VTF+ +I+G C  GNI  A  LY +MV   L PD   + +LI GL 
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTDKTDGG 467
               + +      ++  +    + F++++L++G F+ GR +   + + E   +  K D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD-- 617

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             S   ++YAA+ Q   +D +  K+  LF +M+   ++PD+  YT M+  L + + M+  
Sbjct: 618 LVSFTIIVYAALKQ---HDKE--KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRCSEFL 569
           +     M+  G  P+ V + V++    ++G L SA   C E L
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 245/484 (50%), Gaps = 5/484 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P + A NAL++ L K  +FD     ++EM   GL  + VTY +LI   C +G +  AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LFD+M DKGI+ TV  Y  LI+G C +  +  A  +   M + G+ P   +Y+ L+ G 
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  D++  +E + EM    +  N  TF  L++G CK  ++  A   F  M    V PN 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N +I+G+C  GN+ +A  L  +M +  + PD +TY  LI GLC    +  A   +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +     + N  +  +L+ G+ +EG   +   +  +M  +GV+ ++V+F+ ++    K  +
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + +  L+ EM  + + PD + +T +ID LSK+ NM + L  + +M+    +P+  T + 
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+ L K+G + +A     E       G   PN   Y   +     +G + KA  L S M
Sbjct: 694 LINNLCKSGYLGSAELLCKEML----AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              +L     ++  +++GL +A ++ + + L++ + + G  PD +    ++    + GD+
Sbjct: 750 LQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 560 KSAF 563
             AF
Sbjct: 809 NKAF 812



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 250/505 (49%), Gaps = 8/505 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  + G IE+AL ++ K+    +   +   N+L+NG  K+G  D      
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLL 431

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  GL     +Y  LI   C  GD+   + L  EM ++GI      +T LI+G C +
Sbjct: 432 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKD 491

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM EA  +F  M +  V+PN  T+N +++GYC V ++ +A + Y +M+   L+P+  T+
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC    +  A  F   +       N F    L+ G  + G   E   L  EM  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 611

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ ++ I++         E +  L ++M ++G+  + + Y  +ID   KE +M +
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+   QM   G  PN VT + LI+  CK+G + +A  L  EM+  +++P+   +   +D
Sbjct: 672 ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             + +G+M++   L+  ML+  +  S+ + + LI GL K G+I  A++     +  T+ G
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLM---SKITESG 787

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + Y+ II  LC  G I KA +L+++M    L+PD   Y   +R           
Sbjct: 788 F-SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
           + +  +MI+ G+ P+    + ++ G
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 230/463 (49%), Gaps = 4/463 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + +L  L+K  +F    + +++M+  G+  D   Y   I   C   ++  A  L   M  
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G++ + V Y +L++GLC   ++ EA  +   M   GV  +  TY  L+ G+C++ ++  
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL   H+M+     P+      ++D L K   +  A +    +   G+ PN+F YN LID
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CK     +A  L  EM    + P+  TY ILI  LC  G +E A  L  KM  +GI  
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V  YNSLI+GYCK+G +++A  + S M ++G+ P   ++S LI G C+ G++ + M L+
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + +  +   FTALI+G  KD  M E  RL+ +M+++ + P+  T + +I G    
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I  A   +    D+       P++  Y ++I  LC    + KA++  +D+ +     +
Sbjct: 527 GNIRKAFQLY----DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 582

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           N + T +L G  R  R  +   L  +M   G+  D V   ++V
Sbjct: 583 NFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 190/392 (48%), Gaps = 36/392 (9%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            AL+NG  K  K D     +++M+   ++ + VT+ V+I+  C  G++ KA  L+D+M++
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 148 KGIEPTVVIYTILIHGLC-----------------------------------NENKMVE 172
            G++P    Y  LI GLC                                    E +  E
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              ++  M   GV  +L ++  ++    K  D  ++   + EM    ++P+ + +  ++D
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            L K   +  A N +  M   G  PN   +  LI+  CK+G L  A  LC EM    + P
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 721

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           + FTYN  +      G +E A+ L   M  +G LA++V++N LI G CK G +++A+ + 
Sbjct: 722 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S++TE G  P+ +++S++I   CK G+I+ A  L+ EM+ K L PDVV +   I   +  
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           G   + L +Y  M+ + + P+  T  +L+ G+
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 39/399 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           +N   F+ LI  F +   ++EA  ++ K+    V+P     N ++ G    G     ++ 
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA---------------------------- 138
           Y++MV  GL  D  TY  LI   C    V KA                            
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 139 -------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                   +L+DEM  +G++  +V +TI+++    ++   ++  +FR M+E GV P+   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  ++D   K  ++ +AL  + +M+     PN VT  VL++ LCK G L +A      M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              V PN F YNC +D     G++ +A  L S M +  ++  + ++NILIKGLC  G+++
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQ 774

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L+ K+ + G   + ++Y+++I   CK GD+ KA  + ++M  KG++P+VV ++  I
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                 G  D A+G+YT M+   + P+   + AL+ G+S
Sbjct: 835 RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +LFD+M+  G+     +YT  I   C    +  A  +   M   GV  +   YN LM 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CK   V  A+E  + M++  +  + VT+  L+ G C++ EL  A      M + G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    + +ID                E+ K E+  + F+        C +G L       
Sbjct: 302 SEANCSFMID----------------ELRKKELVEEAFSL------ACKLGDL------- 332

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
                 G++ NV  YN+LID  CK    + A  +  +M  +G+EPN VT++ LI   CK 
Sbjct: 333 ------GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I+ A+ L+ +M  K +   V  + +LI+G  K G++     L   M++  +TP+  + 
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S LI GL +NG +S+ +    E  ++      + N+  + A+I   C D ++ +A++LF 
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERG----IAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            M   N+ P+  T+  M+ G      +     L   M++MG+ PD    + ++ G
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 7/408 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+  N YT + ++    K+     A + + +ML   +  +   +   +   C+   L  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
               V M   GV  +   YN L+ G CK   + EA+ + + M    ++ D  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C + +LE A  +   M + G + +    + +ID   K+  +E+A S+  ++ + G+ PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           V  +++LID  CK    D A  L+ EM  + L P+ V +  LI  L K G +++ L L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M +  I  +V+  +SLI+G  K G +  A         +      +P    Y+ +I  L
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG----LTPTAASYSPLIAGL 453

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G +    +L  +M    +  +N T+T ++ G  + K+M +   L   MI   ++P+ 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           V   VM+ GY   G+++ AF+  + + E  +   + + +T RS +  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL---KPDNYTYRSLISGL 558


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 228/469 (48%), Gaps = 47/469 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSL-EIPKFNPSVFSTLI 59
           + ++L   K  K A+ L++ +      S +      SV +AL  L + P  N  VFS L+
Sbjct: 84  MIHILTKFKHLKTAQSLLEKIAYRDFLSTQ------SVLSALVRLHDDPDINSHVFSWLV 137

Query: 60  IAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           I ++     +EA+ V+  + V    P + AC  LLN L K    D VW+ Y++M   G+ 
Sbjct: 138 IVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVE 197

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK---------------------------- 148
           A++  Y VLI  CC  GDV KA NL  EM  K                            
Sbjct: 198 ANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSV 257

Query: 149 -------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
                  GI+P +V Y  LIHG C E +M EA  +F+ +R+    PN  TY  L+DGYC+
Sbjct: 258 QDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTTLIDGYCR 315

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + D+++AL    EM    L P VVT+  ++  LC++G +R A      M++  + P+   
Sbjct: 316 LNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT 375

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N LI+ +CK G++  A+ + + M +  +  D FTY  LI G C + +++GA+ LL  M 
Sbjct: 376 CNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSML 435

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   +  TY+ L+DGYC + + E  L +  +   KG+  +   + +LI   CK   +D
Sbjct: 436 DAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVD 495

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
            A  +++ M  K  + D V++T+L     K G       L  EM + ++
Sbjct: 496 YAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRL 544



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 204/448 (45%), Gaps = 35/448 (7%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D  I   V  + ++++   N     EA  +F  M   G  P+L+    L++   K    +
Sbjct: 125 DPDINSHVFSWLVIVYA--NTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTD 182

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
              + Y +M    ++ N+  + VL+   CK G++  A N    M    VFP++F YN LI
Sbjct: 183 MVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLI 242

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
             +CK G  +EA+S+   ME+  I PD+ TYN LI G C  G++  A  L +++      
Sbjct: 243 SLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDAT 300

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VTY +LIDGYC+  D+++AL +  +M  +G+ P VVT++S++   C+ G I  A  L
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  K + PD V    LI+   K G+MK  L++   M+EA +    FT  +LIHG  K
Sbjct: 361 LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420

Query: 447 NGRISNALNFFLEKTDKTDG-----------GYCSPNH--------------------VL 475
              +  A    L   D               GYC+  +                     L
Sbjct: 421 IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y A+I+  C   Q+  A K+FS M+      D+  YT++     +  +      LL +M 
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAF 563
           K  ++    I + +   Y  +  + S F
Sbjct: 541 KRRLMITLKIYRALNASYAGDNSILSLF 568



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 19/413 (4%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K IE ++  Y    H L +   M+   + F+ ++    +     Y   +     ++ + R
Sbjct: 65  KWIESSIPNYK---HSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVR 121

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
                   LH +   N   F  L+         + A   F HM   G  P++     L++
Sbjct: 122 --------LHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLN 173

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              K         +  +M +  +  ++  YN+LI   C  G +E A+ LL +M  + +  
Sbjct: 174 SLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFP 233

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ TYN+LI  YCK+G   +ALSV  +M  +G++P++VT++SLI G CK G +  AM L+
Sbjct: 234 DLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLF 293

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E  I+   P+ V +T LIDG  +  ++ + LRL +EM    + P+V T +S++  L + 
Sbjct: 294 KE--IRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEI 351

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GRI +A     E ++K       P++V    +I A C  G +  A K+ + M    L+ D
Sbjct: 352 GRIRDANKLLNEMSEKK----IEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLD 407

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY--QENGD 558
             TY  ++ G  + + M     LL  M+  G  P       +V GY  Q+N +
Sbjct: 408 QFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEE 460



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 197/431 (45%), Gaps = 24/431 (5%)

Query: 4   VLANAKLYKNARCLIKDVTENLLKSRKPH-HVCYSVFNALNSLEIPKF------------ 50
           V AN K+ + A   I+     ++   +PH H C  + N+L    +               
Sbjct: 139 VYANTKMKQEA---IQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIG 195

Query: 51  ---NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
              N  V++ LI A  + G +E+A  +  ++E   V P +   N L++   KKG      
Sbjct: 196 VEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEAL 255

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              + M   G+  D+VTY  LI   C +G + +A+ LF E+ D    P  V YT LI G 
Sbjct: 256 SVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGY 313

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C  N + +A  +   M   G+ P + TYN+++   C++  +  A +  +EM    ++P+ 
Sbjct: 314 CRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDN 373

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           VT   L++  CK+G++++A      M + G+  + F Y  LI G CK   +  A  L   
Sbjct: 374 VTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLS 433

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     SP   TY+ L+ G C     E    L  +  ++G+  +   Y +LI  +CK   
Sbjct: 434 MLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQ 493

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A  + S M EKG   + V ++SL     K G  +AA  L  EM  + L+  + ++ A
Sbjct: 494 VDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRA 553

Query: 405 LIDGLSKDGNM 415
           L    + D ++
Sbjct: 554 LNASYAGDNSI 564



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 12/303 (3%)

Query: 274 NLFEAMSLCSEMEKFEISPD----VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           +     S+ S + +    PD    VF++ +++     + Q   A  + + M   G   ++
Sbjct: 108 DFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQ--EAIQVFEHMMVNGFRPHL 165

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
                L++   K+   +    V  +M   GVE N+  ++ LI   CK+G+++ A  L +E
Sbjct: 166 HACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSE 225

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K + PD+  +  LI    K G   E L +   M    I P + T +SLIHG  K GR
Sbjct: 226 MESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGR 285

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  A+  F E  D T      PNHV Y  +I   C    + +A +L  +M +  L P   
Sbjct: 286 MREAMRLFKEIRDAT------PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVV 339

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           TY ++LR L    R+ D   LL +M +  I PD V    ++  Y + GD+KSA +    +
Sbjct: 340 TYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRM 399

Query: 570 KES 572
            E+
Sbjct: 400 VEA 402



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 23/292 (7%)

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILA-----------------NVVTYNSLIDGYCKE 342
           +I  L     L+ A+ LL+K+     L+                 N   ++ L+  Y   
Sbjct: 84  MIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANT 143

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
              ++A+ V   M   G  P++   + L++   K    D    +Y +M    +  ++ V+
Sbjct: 144 KMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVY 203

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             LI    K G++++   L  EM    + P +FT ++LI    K G    AL+      D
Sbjct: 204 NVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSV----QD 259

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           + +     P+ V Y ++I   C +G++ +A +LF ++R  +  P++ TYTT++ G  R  
Sbjct: 260 RMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTLIDGYCRLN 317

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +   + L  +M   G+ P  V    ++R   E G ++ A +    + E +I
Sbjct: 318 DLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKI 369


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 255/537 (47%), Gaps = 32/537 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K +   F  LI  + +MG  ++A+  +   R  +  P +   N +L+ LI+K        
Sbjct: 123 KVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALT 182

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y  M+    + +V T+ +LID  C  G+V  AL+LFDEM  +GI P    Y ++I GLC
Sbjct: 183 VYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLC 242

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ +A  +F  M++ GV P+  T NAL++G+C +  V+ A              +V 
Sbjct: 243 RSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVR 302

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  L+ GL +          +  M +  V P++++Y  ++ G  +AG + +A+ L +EM
Sbjct: 303 GYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM 362

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  + PD   YN+LIKG C +G L  A  L  ++ +     NV TY+ LI G C+ G  
Sbjct: 363 TESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT 422

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + ++M + G  P+ VTF+SLIDG CK G ++ A  L+ +M I     +  +F  L
Sbjct: 423 RDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR---NPSLFLRL 479

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
             G S              +L++       ++  ++  L  +G I  A    ++  D  D
Sbjct: 480 SQGPS-------------HVLDSA------SLQKMVEQLCDSGLIHKAYRILMQLADSGD 520

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               +P    Y  ++   C  G    A KLF +M+   L PD  TY T++ GLLR +R  
Sbjct: 521 ----APGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREE 576

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR-IGSSETEG 581
           D   +   M K G  PDA + + M+       +L  AF  S +LK  R I S E E 
Sbjct: 577 DAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAF--SLWLKYLRNIRSQEDEA 631



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 182/423 (43%), Gaps = 50/423 (11%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S LI         E+   +YRK+    V P +     ++ GL + GK     E   EM 
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT 363

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+V D V Y VLI   C  G + +A +L  E+      P V  Y+ILI G+C      
Sbjct: 364 ESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTR 423

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM---------LHHNLQP 222
           +A+ +F  M + G  P+  T+N+L+DG CK   + +A   +++M         L  +  P
Sbjct: 424 DAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGP 483

Query: 223 NVV----TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           + V    +   +++ LC  G +  A    + +A  G  P I+ YN L++G CK GN   A
Sbjct: 484 SHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGA 543

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL--- 335
             L  EM+   +SPD  TY  LI GL    + E A  +  +M K G   +   Y ++   
Sbjct: 544 YKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603

Query: 336 -------------------------------IDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
                                          I+GY ++ ++EKA+    +M  K  + ++
Sbjct: 604 MCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDL 663

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             ++  + G C+   +  A+ ++  +    +V        LI  L K+G++   + ++  
Sbjct: 664 GPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLY 723

Query: 425 MLE 427
            +E
Sbjct: 724 TIE 726



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 4/256 (1%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ +   GI  +   +  LI  Y K G  +KA+     M +    P+V T++ ++D   +
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              +  A+ +YT M+  + +P+V  F+ LIDGL K GN+K+ L L+ EM +  I P  FT
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
              +I GL ++ R+ +A   F    DK       P+ V   A++   C   ++ +A  L 
Sbjct: 234 YCVVISGLCRSKRVDDAYRLF----DKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLL 289

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
                D    D   Y+ ++RGL RAKR  DV +L   MI+  + PD  +  +M++G  E 
Sbjct: 290 RLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349

Query: 557 GDLKSAFRCSEFLKES 572
           G ++ A      + ES
Sbjct: 350 GKVRDALELLNEMTES 365



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 171/406 (42%), Gaps = 74/406 (18%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           LA A   ++A  L+ ++TE+      P  VCY+V                   LI  F +
Sbjct: 346 LAEAGKVRDALELLNEMTES---GVVPDTVCYNV-------------------LIKGFCD 383

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           MG + EA  +  +I   +  P ++  + L++G+ + G      E + EM   G     VT
Sbjct: 384 MGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI--------------YTILIHGLCNE 167
           +  LID  C  G + KA  LF +M + G  P++ +                 ++  LC+ 
Sbjct: 444 FNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDS 502

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + +A  +   + + G  P +YTYN L++G+CK+ + N A + + EM    L P+ VT+
Sbjct: 503 GLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTY 562

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC----- 282
           G L++GL +      A   F  M K G  P+  VY  ++   C+   L  A SL      
Sbjct: 563 GTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLR 622

Query: 283 -------------------SEMEK---------FEISP-DVFTYNILIKGLCGVGQLEGA 313
                               E+EK         F+++  D+  Y I + GLC   ++  A
Sbjct: 623 NIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEA 682

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
             +   + +  ++        LI    KEGD+++A+ V     EKG
Sbjct: 683 LKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 12/163 (7%)

Query: 419 LRLYKEMLEA------KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           L LY + LEA      K+    F V  LI    K G    A+  F    D      C+P+
Sbjct: 107 LELYCQTLEALKNGGIKVHNDAFFV--LIKVYLKMGLTDKAMETFGSMRDFD----CTPD 160

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  I+  L     +L A  +++ M   N  P+  T++ ++ GL ++  + D + L  
Sbjct: 161 VYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFD 220

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
           +M + GI+PDA    V++ G   +  +  A+R  + +K+S +G
Sbjct: 221 EMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG 263


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 266/561 (47%), Gaps = 62/561 (11%)

Query: 37  SVFNALNSLE------IPKFNPSVFSTLII-AFSEMGHIEEALWVYRKIEVLPAIQACNA 89
           ++ +++N +E      +P  +PS+ + +I    + +      +W   K   L +  + N 
Sbjct: 38  TIIDSVNPIEPALESKVPFLSPSIVTYIIKNPPNSLLGFRFFIWA-SKFRRLRSWVSHNM 96

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +++ LIK   F+  W+  +E+  CG       + VLI        + KA+  F+ M D  
Sbjct: 97  IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD 156

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P V  Y  ++H +  +  ++ A  ++  M +   +PN+ T++ L+DG CK      AL
Sbjct: 157 CKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNAL 216

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + + EM    + PN +T+ +++ GLC+  +   A   F+ M   G  P+   YN L+ G 
Sbjct: 217 QMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGF 276

Query: 270 CKAGNLFEAMSLCSEMEK----------------------FE-------------ISPDV 294
           CK G + EA+ L    EK                      FE             I PDV
Sbjct: 277 CKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDV 336

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             Y I++KGL   G+ + A  LL +M + G++ +   YN+LI GYC  G +++A S+  +
Sbjct: 337 ILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLE 396

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +++     +  T++ LI G C++G +  A  ++ EM      P VV F ALIDG  K GN
Sbjct: 397 ISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGN 456

Query: 415 MKETLRLYKEMLEAKITPSVF--------------TVSSLIHGLFKNGRISNALNFFLEK 460
           +++   L+ +M E    PS+F              ++ +++  L  +G I  A N  ++ 
Sbjct: 457 IEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQ- 514

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
              TD G+ +PN + Y  +I   C  G I  A KLF +++   L PD+ TY T++ GLL 
Sbjct: 515 --LTDSGF-APNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571

Query: 521 AKRMLDVMMLLADMIKMGIVP 541
           A R  D   +L  ++K G  P
Sbjct: 572 ANREEDAFTVLDQILKNGCTP 592



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 231/491 (47%), Gaps = 86/491 (17%)

Query: 55  FSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI A+++M  IE+A+  +   +  +  P +   N +L+ +++K         Y  M+
Sbjct: 129 FTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRML 188

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
               + ++ T+ +LID  C  G    AL +FDEM  + I P  + YTI+I GLC   K  
Sbjct: 189 KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKAD 248

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE--------------------- 210
            A  +F +M++ G +P+  TYNAL+ G+CK+  V+ AL                      
Sbjct: 249 VAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLI 308

Query: 211 --------------FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
                         +Y +M  HN++P+V+ + ++M GL K G+ + A      M + G+ 
Sbjct: 309 DGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV 368

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN LI G+C  G L EA SL  E+ K +      TY ILI G+C  G +  A+ +
Sbjct: 369 PDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQI 428

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDME------------------------------ 346
             +M K G   +VVT+N+LIDG+CK G++E                              
Sbjct: 429 FNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLD 488

Query: 347 ------------------KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
                             KA ++  Q+T+ G  PN++T++ LI G CKAGNI+ A  L+ 
Sbjct: 489 TASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFK 548

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           E+ +K L PD V +  LI+GL      ++   +  ++L+   TP      S +    +  
Sbjct: 549 ELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRN 608

Query: 449 RISNALNFFLE 459
           +I+ A + +L+
Sbjct: 609 KITLAFSLWLK 619



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 20/326 (6%)

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK--FEISPDVFTYNILIK 302
            FF+  +KF    +   +N +ID   K         +  E+++  F IS D FT  +LI+
Sbjct: 77  RFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFT--VLIQ 134

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
               +  +E A    + M       +V TYN+++    ++  +  AL + ++M +    P
Sbjct: 135 AYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLP 194

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N+ TFS LIDG CK+G    A+ ++ EM  + ++P+ + +T +I GL +        RL+
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF--FLEKTDKTDGGYCSPNHVL----Y 476
             M +    P   T ++L+HG  K GR+  AL    + EK            +VL    Y
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKD----------RYVLDKQGY 304

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
           + +I  L    +   A   +  M   N++PD   YT M++GL +A +  D + LL +M +
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTE 364

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            G+VPD      +++GY + G L  A
Sbjct: 365 RGLVPDTHCYNALIKGYCDLGLLDEA 390



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 4/278 (1%)

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           KF       ++N++I  L      E    +L+++ + G   +   +  LI  Y K   +E
Sbjct: 84  KFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIE 143

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           KA+     M +   +P+V T+++++    +   +  A+G+Y  M+  + +P++  F+ LI
Sbjct: 144 KAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILI 203

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DG+ K G  +  L+++ EM + +I P+  T + +I GL +  +   A   F+   D    
Sbjct: 204 DGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHG-- 261

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C P+ V Y A++   C  G++ +A  L      D    D   Y+ ++ GL RA+R  D
Sbjct: 262 --CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFED 319

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +    M +  I PD ++  +M++G  + G  K A R
Sbjct: 320 AQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALR 357



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 162/433 (37%), Gaps = 89/433 (20%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S LI         E+A   YRK+    + P +     ++ GL K GKF        EM 
Sbjct: 304 YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GLV D   Y  LI   C  G + +A +L  E+       +   YTILI G+C    + 
Sbjct: 364 ERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVG 423

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA-LEFYHEMLHHN----------- 219
           +A+ +F  M + G  P++ T+NAL+DG+CK  ++ +A L FY   +  N           
Sbjct: 424 DAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGA 483

Query: 220 ------------------------------------LQPNVVTFGVLMDGLCKVGELRAA 243
                                                 PN++T+ +L+ G CK G +  A
Sbjct: 484 NRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA 543

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  +   G+ P+   Y  LI+G   A    +A ++  ++ K   +P    Y   +  
Sbjct: 544 FKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTW 603

Query: 304 LCGVGQL-----------------------------------EGAEGLLQKMYKEGILAN 328
            C   ++                                   E   GLL+  +K      
Sbjct: 604 SCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDF-Q 662

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           +  Y   + G C+ G +E+AL +   + E  V     +   LI    K GN+D A  ++ 
Sbjct: 663 LAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFL 722

Query: 389 EMVIKS--LVPDV 399
             + K   L+P +
Sbjct: 723 YTIDKGYMLMPRI 735



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 140/343 (40%), Gaps = 28/343 (8%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV-------LPAIQACNALLN 92
            N +E     PSV  F+ LI  F + G+IE+A  ++ K+E+       L   Q  N +L+
Sbjct: 429 FNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLD 488

Query: 93  G---------LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
                     L   G     +    ++   G   +++TY +LI   C  G++  A  LF 
Sbjct: 489 TASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFK 548

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           E+  KG+ P  V Y  LI+GL + N+  +A ++   + + G  P    Y + M   C+  
Sbjct: 549 ELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRN 608

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM----AKFGVFPNI 259
            +  A   + + L      +      + +   K GE+  A    + M      F + P  
Sbjct: 609 KITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLNDFQLAP-- 665

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y   + G C+AG L EA+ +   +E+  +     +   LI  L  VG L+ A  +   
Sbjct: 666 --YTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLY 723

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDME-KALSVCSQMTEKGVE 361
              +G +      N L+    +  D   +A  + S+M   G +
Sbjct: 724 TIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYD 766



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 4/172 (2%)

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           FT LI   +K   +++ +  ++ M +    P VFT ++++H + +   +  AL  +    
Sbjct: 129 FTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIY---- 184

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++     C PN   ++ +I  +C  G+   A ++F +M    + P+  TYT ++ GL +A
Sbjct: 185 NRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQA 244

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++      L   M   G +PD+V    ++ G+ + G +  A    ++ ++ R
Sbjct: 245 QKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDR 296



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%)

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +  +IQA      I KA + F  M+  + +PD  TY T+L  ++R + +L  + +   M+
Sbjct: 129 FTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRML 188

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           K+  +P+     +++ G  ++G  ++A +  + + + RI
Sbjct: 189 KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRI 227


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/523 (30%), Positives = 267/523 (51%), Gaps = 14/523 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++  I A+ E  +++ A  +  ++E   V  +    N L+ GL K  +     E    M
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 282

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ AD VTY  L+   C   ++  AL +  +MI  G  P+    + +I  L  +  +
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 342

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   + + G+VPN++ YNAL+D  CK    + A   + EM    L+PN VT+ +L
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A   F  M   G+   ++ YN LI+G+CK G+L  A  L S M K  +
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P   +Y+ LI GLC  G L     L ++M + GI  N  T+ +LI+G+CK+  M++A  
Sbjct: 463 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 522

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +  V PN VTF+ +I+G C  GNI  A  LY +MV   L PD   + +LI GL 
Sbjct: 523 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 582

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTDKTDGG 467
               + +      ++  +    + F++++L++G F+ GR +   + + E   +  K D  
Sbjct: 583 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD-- 640

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             S   ++YAA+ Q   +D +  K+  LF +M+   ++PD+  YT M+  L + + M+  
Sbjct: 641 LVSFTIIVYAALKQ---HDKE--KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 695

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRCSEFL 569
           +     M+  G  P+ V + V++    ++G L SA   C E L
Sbjct: 696 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 245/484 (50%), Gaps = 5/484 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P + A NAL++ L K  +FD     ++EM   GL  + VTY +LI   C +G +  AL
Sbjct: 357 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 416

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LFD+M DKGI+ TV  Y  LI+G C +  +  A  +   M + G+ P   +Y+ L+ G 
Sbjct: 417 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 476

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  D++  +E + EM    +  N  TF  L++G CK  ++  A   F  M    V PN 
Sbjct: 477 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N +I+G+C  GN+ +A  L  +M +  + PD +TY  LI GLC    +  A   +  
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 596

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +     + N  +  +L+ G+ +EG   +   +  +M  +GV+ ++V+F+ ++    K  +
Sbjct: 597 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 656

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + +  L+ EM  + + PD + +T +ID LSK+ NM + L  + +M+    +P+  T + 
Sbjct: 657 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 716

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+ L K+G + +A     E       G   PN   Y   +     +G + KA  L S M
Sbjct: 717 LINNLCKSGYLGSAELLCKEML----AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              +L     ++  +++GL +A ++ + + L++ + + G  PD +    ++    + GD+
Sbjct: 773 LQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 560 KSAF 563
             AF
Sbjct: 832 NKAF 835



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 250/505 (49%), Gaps = 8/505 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  + G IE+AL ++ K+    +   +   N+L+NG  K+G  D      
Sbjct: 395 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLL 454

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  GL     +Y  LI   C  GD+   + L  EM ++GI      +T LI+G C +
Sbjct: 455 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKD 514

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM EA  +F  M +  V+PN  T+N +++GYC V ++ +A + Y +M+   L+P+  T+
Sbjct: 515 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 574

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC    +  A  F   +       N F    L+ G  + G   E   L  EM  
Sbjct: 575 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 634

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ ++ I++         E +  L ++M ++G+  + + Y  +ID   KE +M +
Sbjct: 635 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 694

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+   QM   G  PN VT + LI+  CK+G + +A  L  EM+  +++P+   +   +D
Sbjct: 695 ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 754

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             + +G+M++   L+  ML+  +  S+ + + LI GL K G+I  A++     +  T+ G
Sbjct: 755 YFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLM---SKITESG 810

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + Y+ II  LC  G I KA +L+++M    L+PD   Y   +R           
Sbjct: 811 F-SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 869

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
           + +  +MI+ G+ P+    + ++ G
Sbjct: 870 LGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 229/461 (49%), Gaps = 4/461 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           +L  L+K  +F    + +++M+  G+  D   Y   I   C   ++  A  L   M  +G
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 251

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++ + V Y +L++GLC   ++ EA  +   M   GV  +  TY  L+ G+C++ ++  AL
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 311

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              H+M+     P+      ++D L K   +  A +    +   G+ PN+F YN LID  
Sbjct: 312 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 371

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK     +A  L  EM    + P+  TY ILI  LC  G +E A  L  KM  +GI   V
Sbjct: 372 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 431

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             YNSLI+GYCK+G +++A  + S M ++G+ P   ++S LI G C+ G++ + M L+ E
Sbjct: 432 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 491

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  + +  +   FTALI+G  KD  M E  RL+ +M+++ + P+  T + +I G    G 
Sbjct: 492 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 551

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           I  A   +    D+       P++  Y ++I  LC    + KA++  +D+ +     +N 
Sbjct: 552 IRKAFQLY----DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 607

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           + T +L G  R  R  +   L  +M   G+  D V   ++V
Sbjct: 608 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 648



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 203/428 (47%), Gaps = 39/428 (9%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +S LI      G +   + ++R++    +        AL+NG  K  K D     +++M+
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC------ 165
              ++ + VT+ V+I+  C  G++ KA  L+D+M++ G++P    Y  LI GLC      
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588

Query: 166 -----------------------------NENKMVEAESMFRSMRECGVVPNLYTYNALM 196
                                         E +  E   ++  M   GV  +L ++  ++
Sbjct: 589 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 648

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
               K  D  ++   + EM    ++P+ + +  ++D L K   +  A N +  M   G  
Sbjct: 649 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 708

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN   +  LI+  CK+G L  A  LC EM    + P+ FTYN  +      G +E A+ L
Sbjct: 709 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 768

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
              M  +G LA++V++N LI G CK G +++A+ + S++TE G  P+ +++S++I   CK
Sbjct: 769 HSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCK 827

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+I+ A  L+ EM+ K L PDVV +   I   +  G   + L +Y  M+ + + P+  T
Sbjct: 828 MGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDT 887

Query: 437 VSSLIHGL 444
             +L+ G+
Sbjct: 888 YRALLSGI 895



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 39/399 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           +N   F+ LI  F +   ++EA  ++ K+    V+P     N ++ G    G     ++ 
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA---------------------------- 138
           Y++MV  GL  D  TY  LI   C    V KA                            
Sbjct: 559 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 618

Query: 139 -------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                   +L+DEM  +G++  +V +TI+++    ++   ++  +FR M+E GV P+   
Sbjct: 619 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 678

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  ++D   K  ++ +AL  + +M+     PN VT  VL++ LCK G L +A      M 
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              V PN F YNC +D     G++ +A  L S M +  ++  + ++NILIKGLC  G+++
Sbjct: 739 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQ 797

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L+ K+ + G   + ++Y+++I   CK GD+ KA  + ++M  KG++P+VV ++  I
Sbjct: 798 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                 G  D A+G+YT M+   + P+   + AL+ G+S
Sbjct: 858 RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 896



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +LFD+M+  G+     +YT  I   C    +  A  +   M   GV  +   YN LM 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CK   V  A+E  + M++  +  + VT+  L+ G C++ EL  A      M + G  P
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 324

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    + +ID                E+ K E+  + F+        C +G L       
Sbjct: 325 SEANCSFMID----------------ELRKKELVEEAFSL------ACKLGDL------- 355

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
                 G++ NV  YN+LID  CK    + A  +  +M  +G+EPN VT++ LI   CK 
Sbjct: 356 ------GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I+ A+ L+ +M  K +   V  + +LI+G  K G++     L   M++  +TP+  + 
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S LI GL +NG +S+ +    E  ++      + N+  + A+I   C D ++ +A++LF 
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERG----IAWNNYTFTALINGFCKDKKMDEAARLFD 525

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            M   N+ P+  T+  M+ G      +     L   M++MG+ PD    + ++ G
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 7/408 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+  N YT + ++    K+     A + + +ML   +  +   +   +   C+   L  A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
               V M   GV  +   YN L+ G CK   + EA+ + + M    ++ D  TY  L+ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C + +LE A  +   M + G + +    + +ID   K+  +E+A S+  ++ + G+ PN
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           V  +++LID  CK    D A  L+ EM  + L P+ V +  LI  L K G +++ L L+ 
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M +  I  +V+  +SLI+G  K G +  A         +      +P    Y+ +I  L
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG----LTPTAASYSPLIAGL 476

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G +    +L  +M    +  +N T+T ++ G  + K+M +   L   MI   ++P+ 
Sbjct: 477 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           V   VM+ GY   G+++ AF+  + + E  +   + + +T RS +  L
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL---KPDNYTYRSLISGL 581



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L +I + N L+ GL K GK     +   ++   G   D ++Y  +I   C  GD+ KA  
Sbjct: 777 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 836

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L++EM+ KG++P VV Y I I       +  +A  ++ +M   GV PN  TY AL+ G  
Sbjct: 837 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 896

Query: 201 KVADVNRAL 209
            +    +AL
Sbjct: 897 LMVSKGQAL 905


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/523 (30%), Positives = 267/523 (51%), Gaps = 14/523 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++  I A+ E  +++ A  +  ++E   V  +    N L+ GL K  +     E    M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+ AD VTY  L+   C   ++  AL +  +MI  G  P+    + +I  L  +  +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   + + G+VPN++ YNAL+D  CK    + A   + EM    L+PN VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  LCK G +  A   F  M   G+   ++ YN LI+G+CK G+L  A  L S M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P   +Y+ LI GLC  G L     L ++M + GI  N  T+ +LI+G+CK+  M++A  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M +  V PN VTF+ +I+G C  GNI  A  LY +MV   L PD   + +LI GL 
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE---KTDKTDGG 467
               + +      ++  +    + F++++L++G F+ GR +   + + E   +  K D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD-- 617

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             S   ++YAA+ Q   +D +  K+  LF +M+   ++PD+  YT M+  L + + M+  
Sbjct: 618 LVSFTIIVYAALKQ---HDKE--KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRCSEFL 569
           +     M+  G  P+ V + V++    ++G L SA   C E L
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 245/484 (50%), Gaps = 5/484 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           ++P + A NAL++ L K  +FD     ++EM   GL  + VTY +LI   C +G +  AL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            LFD+M DKGI+ TV  Y  LI+G C +  +  A  +   M + G+ P   +Y+ L+ G 
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  D++  +E + EM    +  N  TF  L++G CK  ++  A   F  M    V PN 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N +I+G+C  GN+ +A  L  +M +  + PD +TY  LI GLC    +  A   +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           +     + N  +  +L+ G+ +EG   +   +  +M  +GV+ ++V+F+ ++    K  +
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + +  L+ EM  + + PD + +T +ID LSK+ NM + L  + +M+    +P+  T + 
Sbjct: 634 KEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+ L K+G + +A     E       G   PN   Y   +     +G + KA  L S M
Sbjct: 694 LINNLCKSGYLGSAELLCKEML----AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              +L     ++  +++GL +A ++ + + L++ + + G  PD +    ++    + GD+
Sbjct: 750 LQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 560 KSAF 563
             AF
Sbjct: 809 NKAF 812



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 250/505 (49%), Gaps = 8/505 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI A  + G IE+AL ++ K+    +   +   N+L+NG  K+G  D      
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLL 431

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             MV  GL     +Y  LI   C  GD+   + L  EM ++GI      +T LI+G C +
Sbjct: 432 SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKD 491

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM EA  +F  M +  V+PN  T+N +++GYC V ++ +A + Y +M+   L+P+  T+
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC    +  A  F   +       N F    L+ G  + G   E   L  EM  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 611

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D+ ++ I++         E +  L ++M ++G+  + + Y  +ID   KE +M +
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+   QM   G  PN VT + LI+  CK+G + +A  L  EM+  +++P+   +   +D
Sbjct: 672 ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
             + +G+M++   L+  ML+  +  S+ + + LI GL K G+I  A++     +  T+ G
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLM---SKITESG 787

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
           + SP+ + Y+ II  LC  G I KA +L+++M    L+PD   Y   +R           
Sbjct: 788 F-SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
           + +  +MI+ G+ P+    + ++ G
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 230/464 (49%), Gaps = 4/464 (0%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
            + +L  L+K  +F    + +++M+  G+  D   Y   I   C   ++  A  L   M 
Sbjct: 166 ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRME 225

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
            +G++ + V Y +L++GLC   ++ EA  +   M   GV  +  TY  L+ G+C++ ++ 
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            AL   H+M+     P+      ++D L K   +  A +    +   G+ PN+F YN LI
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           D  CK     +A  L  EM    + P+  TY ILI  LC  G +E A  L  KM  +GI 
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
             V  YNSLI+GYCK+G +++A  + S M ++G+ P   ++S LI G C+ G++ + M L
Sbjct: 406 VTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMEL 465

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           + EM  + +  +   FTALI+G  KD  M E  RL+ +M+++ + P+  T + +I G   
Sbjct: 466 HREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCL 525

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G I  A   + +  +        P++  Y ++I  LC    + KA++  +D+ +     
Sbjct: 526 VGNIRKAFQLYDQMVEMG----LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +N + T +L G  R  R  +   L  +M   G+  D V   ++V
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 190/392 (48%), Gaps = 36/392 (9%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
            AL+NG  K  K D     +++M+   ++ + VT+ V+I+  C  G++ KA  L+D+M++
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 148 KGIEPTVVIYTILIHGLC-----------------------------------NENKMVE 172
            G++P    Y  LI GLC                                    E +  E
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              ++  M   GV  +L ++  ++    K  D  ++   + EM    ++P+ + +  ++D
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            L K   +  A N +  M   G  PN   +  LI+  CK+G L  A  LC EM    + P
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLP 721

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           + FTYN  +      G +E A+ L   M  +G LA++V++N LI G CK G +++A+ + 
Sbjct: 722 NKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S++TE G  P+ +++S++I   CK G+I+ A  L+ EM+ K L PDVV +   I   +  
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           G   + L +Y  M+ + + P+  T  +L+ G+
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 39/399 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           +N   F+ LI  F +   ++EA  ++ K+    V+P     N ++ G    G     ++ 
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA---------------------------- 138
           Y++MV  GL  D  TY  LI   C    V KA                            
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 139 -------LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                   +L+DEM  +G++  +V +TI+++    ++   ++  +FR M+E GV P+   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  ++D   K  ++ +AL  + +M+     PN VT  VL++ LCK G L +A      M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              V PN F YNC +D     G++ +A  L S M +  ++  + ++NILIKGLC  G+++
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQ 774

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L+ K+ + G   + ++Y+++I   CK GD+ KA  + ++M  KG++P+VV ++  I
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                 G  D A+G+YT M+   + P+   + AL+ G+S
Sbjct: 835 RWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A +LFD+M+  G+     +YT  I   C    +  A  +   M   GV  +   YN LM 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G CK   V  A+E  + M++  +  + VT+  L+ G C++ EL  A      M + G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    + +ID                E+ K E+  + F+        C +G L       
Sbjct: 302 SEANCSFMID----------------ELRKKELVEEAFSL------ACKLGDL------- 332

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
                 G++ NV  YN+LID  CK    + A  +  +M  +G+EPN VT++ LI   CK 
Sbjct: 333 ------GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I+ A+ L+ +M  K +   V  + +LI+G  K G++     L   M++  +TP+  + 
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           S LI GL +NG +S+ +    E  ++      + N+  + A+I   C D ++ +A++LF 
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERG----IAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            M   N+ P+  T+  M+ G      +     L   M++MG+ PD    + ++ G
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 7/408 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+  N YT + ++    K+     A + + +ML   +  +   +   +   C+   L  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
               V M   GV  +   YN L+ G CK   + EA+ + + M    ++ D  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C + +LE A  +   M + G + +    + +ID   K+  +E+A S+  ++ + G+ PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           V  +++LID  CK    D A  L+ EM  + L P+ V +  LI  L K G +++ L L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M +  I  +V+  +SLI+G  K G +  A         +      +P    Y+ +I  L
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG----LTPTAASYSPLIAGL 453

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C +G +    +L  +M    +  +N T+T ++ G  + K+M +   L   MI   ++P+ 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
           V   VM+ GY   G+++ AF+  + + E  +   + + +T RS +  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL---KPDNYTYRSLISGL 558


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 219/412 (53%), Gaps = 4/412 (0%)

Query: 56  STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + LI  + +MG +E+AL ++ ++I     P     N  ++GL + G      +  + M+ 
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G   DV TY  +I+C    G++ +A  + ++M+D+G  P    +  LI  L ++N++ E
Sbjct: 331 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEE 390

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  + R +   G+ P++YT+N L++  CKV D +  +  + EM      P+ VT+ +L+D
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
            LC +G+L  A +    M   G   +   YN +ID  CK   + EA  +  +M+   IS 
Sbjct: 451 HLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
              T+N LI GLC   +++ A  L+++M KEG+  N +TYNS++  YCK+G+++KA  + 
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADIL 570

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT  G E +VVT+ +LI+G CKAG    A+ L   M IK + P    +  +I  L + 
Sbjct: 571 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 630

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDK 463
            N+++ L L++EM E    P   T   +   L +  G I  A +F +E  +K
Sbjct: 631 NNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 241/512 (47%), Gaps = 13/512 (2%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           SV+N +    I    P V   +TLI A      +  A+ +  ++    V P       L+
Sbjct: 183 SVYNEMTGRGI---QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLM 239

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G I++G  ++      +M+  G     VT  VLI+  C  G V  AL    + I  G E
Sbjct: 240 QGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE 299

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V Y   +HGLC    +  A  +   M + G  P+++TYN +++   K  +++ A   
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
            ++M+     P+  TF  L+  L     L  A +    +   G+ P+++ +N LI+  CK
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G+    + L  EM+    +PD  TYNILI  LC +G+L  A  LL +M   G   + VT
Sbjct: 420 VGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVT 479

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++ID  CK+  +E+A  V  QM  +G+  + VTF++LIDG CKA  ID A  L  +MV
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            + L P+ + + +++    K GN+K+   + + M        V T  +LI+GL K GR  
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            AL     +  +  G    P    Y  +IQ+L     +  A  LF +M      PD  TY
Sbjct: 600 VALKLL--RGMRIKG--IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655

Query: 512 TTMLRGLLRAKRML-DVMMLLADMIKMGIVPD 542
             + R L R    + +    L +M+  G +P+
Sbjct: 656 KIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 238/520 (45%), Gaps = 43/520 (8%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N LLN L++  K   +   Y EM   G+  DVVT   LI   C    V  A+ + +EM  
Sbjct: 166 NHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS 225

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+ P    +T L+ G   E  +  A  +   M E G  P   T N L++GYCK+  V  
Sbjct: 226 HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL +  + +    +P+ VT+   + GLC+ G +  A      M + G  P++F YN +I+
Sbjct: 286 ALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345

Query: 268 GHCKAGNLFEAMSLCSEM----------------------EKFE-------------ISP 292
              K G L EA  + ++M                       + E             +SP
Sbjct: 346 CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSP 405

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DV+T+NILI  LC VG       L ++M   G   + VTYN LID  C  G +  AL + 
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLL 465

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M   G   + VT++++ID  CK   I+ A  ++ +M  + +    V F  LIDGL K 
Sbjct: 466 NEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKA 525

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
             + +   L ++M++  + P+  T +S++    K G I  A +        T  G+   +
Sbjct: 526 KRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADIL---ETMTANGF-EID 581

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V Y  +I  LC  G+   A KL   MR   +RP    Y  +++ L R   + D + L  
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641

Query: 533 DMIKMGIVPDAVINQVMVRGY-QENGDLKSAFRCSEFLKE 571
           +M ++G  PDA+  +++ R   +  G +K AF   +FL E
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAF---DFLVE 678



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 218/452 (48%), Gaps = 6/452 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKAL-NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
           G+ AD V +  L++    +G  +K L ++++EM  +GI+P VV    LI  LC  +++  
Sbjct: 157 GVQADTVVFNHLLNVLV-EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  M   M   GV P+  T+  LM G+ +   +  AL    +M+     P  VT  VL++
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G CK+G +  A  +       G  P+   YN  + G C+ G++  A+ +   M +    P
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           DVFTYN +I  L   G+L+ A+G++ +M   G L +  T+N+LI     +  +E+AL + 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            ++T KG+ P+V TF+ LI+  CK G+    + L+ EM      PD V +  LID L   
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G +   L L  EM       S  T +++I  L K  RI  A   F    D+ D    S +
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF----DQMDAQGISRS 511

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V +  +I  LC   +I  A++L   M  + L+P+N TY ++L    +   +     +L 
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            M   G   D V    ++ G  + G  + A +
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRTQVALK 603



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 188/433 (43%), Gaps = 37/433 (8%)

Query: 132 QGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           Q D   AL + +  + +    P+  +Y  ++  L         E + R MR  G      
Sbjct: 66  QSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAV 125

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
              + ++ Y ++   + A++     L ++      TFGV  D +                
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQLDND------TFGVQADTV---------------- 163

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
                     V+N L++   +   L    S+ +EM    I PDV T N LIK LC   Q+
Sbjct: 164 ----------VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQV 213

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A  +L++M   G+  +  T+ +L+ G+ +EG +E AL V ++M E G  P  VT + L
Sbjct: 214 RTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+G CK G ++ A+G   + +     PD V +   + GL ++G++   L++   ML+   
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P VFT +++I+ L KNG +  A     +  D+     C P+   +  +I AL    ++ 
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG----CLPDTTTFNTLIVALSSQNRLE 389

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  L  ++    L PD  T+  ++  L +       + L  +M   G  PD V   +++
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449

Query: 551 RGYQENGDLKSAF 563
                 G L +A 
Sbjct: 450 DHLCSMGKLGNAL 462



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 166/377 (44%), Gaps = 14/377 (3%)

Query: 203 ADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           +D   AL   +  L   +  P+   +  ++  L   G           M + G      V
Sbjct: 67  SDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVV 126

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEM---EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
               ++ + +     +A+ L       + F +  D   +N L+  L    +L+  E +  
Sbjct: 127 VRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYN 186

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   GI  +VVT N+LI   C+   +  A+ +  +M+  GV P+  TF++L+ G  + G
Sbjct: 187 EMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEG 246

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           +I+AA+ +  +M+     P  V    LI+G  K G +++ L   ++ +     P   T +
Sbjct: 247 SIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYN 306

Query: 439 SLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           + +HGL +NG +S+AL   +  L++      G+  P+   Y  +I  L  +G++ +A  +
Sbjct: 307 TFVHGLCQNGHVSHALKVMDLMLQE------GH-DPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            + M      PD  T+ T++  L    R+ + + L  ++   G+ PD     +++    +
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419

Query: 556 NGDLKSAFRCSEFLKES 572
            GD     R  E +K S
Sbjct: 420 VGDPHLGIRLFEEMKSS 436


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 234/460 (50%), Gaps = 22/460 (4%)

Query: 99  KFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           K D     ++E VL GL A +  TY VLI   C  G + +A+++F +M   G+ P     
Sbjct: 5   KHDQALRLFKE-VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
             L+ GLC   +M  A  +FR M+    +P   ++N L+ G+       RA+EF+ EM  
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKA 120

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             ++P++ ++ +L+  L   G +  A   F  M      P+I  YN L+DG+CK G  +E
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYE 177

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A SL  E+ K    P+VFTY+I+I   C + ++E A  +  KM +   + N VT+N+LI 
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA-GNIDAAMGLYTEMVIKSLV 396
           G+CK G +E A+ + ++M + G +  +VT+++LID  CK  G +  A+ L+ ++    L 
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 297

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P +V + +LI G S+  N  + LRL   M      P V T + LI GL    R+ +A   
Sbjct: 298 PTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F       +G  C+PN   +  +I+ LC   ++ +A  +   M +    PD  T+ T++ 
Sbjct: 356 F-------NGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIIL 404

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              +A  M D   ++ DM+K G  P+      +  G Q +
Sbjct: 405 AFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSS 444



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 209/416 (50%), Gaps = 20/416 (4%)

Query: 33  HVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNA 89
           H   SVF+ + S  +   N S  +TL++   E+G +  AL ++R+++    LP   + N 
Sbjct: 42  HQAVSVFSDMKSSGLLP-NASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNI 100

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LL G    G+     EF++EM   G+  D+ +Y +L+      G + +A  LF  M    
Sbjct: 101 LLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT--- 154

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P ++ Y +L+ G C   +  EA+S+ + + + G  PN++TY+ +++ YCK+  V  A 
Sbjct: 155 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E + +M+  N  PN VTF  L+ G CK G L  A   F  M K G    I  YN LID  
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274

Query: 270 CKA-GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           CK  G ++ A+ L +++E   ++P + TYN LI+G       +G   LL  M+ EG   +
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN-DGLR-LLCHMHAEGCKPD 332

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V+TYN LI G C    +E A  + + M      PNV TF+ LI G C    ++ A  +  
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 389

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            M      PD+  F  +I    K G M +   + K+ML+    P+ +T  +L HG+
Sbjct: 390 RMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 16/265 (6%)

Query: 319 KMYKE---GILA-NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           +++KE   G+ A N  TYN LI G+CK G M +A+SV S M   G+ PN  T ++L+ G 
Sbjct: 11  RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL 70

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G + +A+ L+ EM     +P       L+ G    G     +  +KEM  + + P +
Sbjct: 71  CEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDL 127

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            +   L+  L  +GR++ A   F   T       CSP+ + Y  ++   C  GQ  +A  
Sbjct: 128 ESYHILLSALSDSGRMAEAHALFSAMT-------CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  ++      P+  TY+ ++    +  ++ +   +   MI+   VP+AV    ++ G+ 
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 555 ENGDLKSAFRCSEFLKESRIGSSET 579
           + G L+ A +   F +  +IG   T
Sbjct: 241 KAGMLEDAIKL--FAEMEKIGCKAT 263



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 39/74 (52%)

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF ++ +    P+  TY  ++RG  +  +M   + + +DM   G++P+A     ++
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 551 RGYQENGDLKSAFR 564
            G  E G + SA +
Sbjct: 68  LGLCEIGQMSSALK 81


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 270/560 (48%), Gaps = 47/560 (8%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFD 101
           L++ K N  VF  LI  F+    +E A +V+ + +   +   I +CN LL  L++  + D
Sbjct: 130 LDVEKSN-VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVD 188

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCC-GQG---DVMKALNLFDEMIDKGIEPTVVIY 157
            V   +E ++  G   ++ TY ++++  C G G   D+ +A  +  ++   G  P VV Y
Sbjct: 189 GVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTY 248

Query: 158 -----------------------------------TILIHGLCNENKMVEAESMFRSMRE 182
                                                +I+GLC    + EA  +F+ M+ 
Sbjct: 249 GTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKN 308

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G++P++Y+Y+ L+DG+C+   V++A E + EM +  + PN+ ++ +L+DG CK G +  
Sbjct: 309 SGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDK 368

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   F  M   G+ P+++ Y+ LIDG C+ G++  A+    EM     SP  F Y  LIK
Sbjct: 369 ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIK 428

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           G     Q   A    + M K G+  + +  N ++  YC++ D  KAL++  +  E GV  
Sbjct: 429 GYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHF 488

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N  +++  I   C+    + A+ L   M+ ++++PDVV ++ LI   +K  N ++ + L+
Sbjct: 489 NPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLF 548

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M +  IT +V T + LI+    + ++  A   F  K  K    Y  P+ + Y +++  
Sbjct: 549 IKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF--KGMKESRVY--PDQIAYTSLVAG 604

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G++ +A  LF +M  +   P+  TYT  +   L+  +      L   M + G+ PD
Sbjct: 605 FCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPD 664

Query: 543 AVINQVMVRGYQENGDLKSA 562
            ++  +++  +   G++  A
Sbjct: 665 QILYTMLIAAFCNTGEMNRA 684



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 253/500 (50%), Gaps = 16/500 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA++ GL + G  D   E ++EM   G++ DV +Y +LID  C +G V +A  +F EM +
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 343

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            GI P +  Y+ILI G C E ++ +A  +F  M+  G++P++Y+Y+ L+DG+C+  D++ 
Sbjct: 344 SGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDS 403

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A++F+ EM  +N  P+   +  L+ G  K  +   A   F  M K G++P+    N ++ 
Sbjct: 404 AIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILS 463

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +C+  +  +A++L  + ++  +  + ++YN  I  +C     E A  LL  M K  +L 
Sbjct: 464 IYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLP 523

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +VV Y++LI  + K  + EKA+ +  +MT+ G+  NV T++ LI+       +D A  L+
Sbjct: 524 DVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF 583

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M    + PD + +T+L+ G    G M     L+ EM     +P+V T +  I+   K 
Sbjct: 584 KGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKL 643

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-NLRP 506
            + + A   + EK  K  G Y  P+ +LY  +I A C  G++ +A  LF +M+ +    P
Sbjct: 644 NKNNQAHKLY-EKM-KERGVY--PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTP 699

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           +   YT ++   ++  +      L  +M   G          + R     G +  ++ C 
Sbjct: 700 NVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG----------LSRLCSSEGSVSESWCCR 749

Query: 567 -EFLKESRIGSSETEGHTTR 585
            + LK  ++G    +G   R
Sbjct: 750 HQVLKTGKLGGRAKQGLDWR 769



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 236/501 (47%), Gaps = 8/501 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +      + GL K G F   W   + +       +   +  +I   C  G + +A  +
Sbjct: 243 PNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEV 302

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM + GI P V  Y+ILI G C + ++ +A  +F+ MR  G++PN+Y+Y+ L+DG+CK
Sbjct: 303 FKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCK 362

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V++ALE + EM +  + P+V ++ +L+DG C+ G++ +A  F+  M      P+ F 
Sbjct: 363 EGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFN 422

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI G+ K+     A+     M+K  + PD    N ++   C       A  L +K  
Sbjct: 423 YCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQ 482

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G+  N  +YN  I   C+    EKAL +   M ++ V P+VV +S+LI    K  N +
Sbjct: 483 ENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSE 542

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ +M    +  +V  +T LI+    D  M    RL+K M E+++ P     +SL+
Sbjct: 543 KAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLV 602

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G    G ++ A   F    D+     CSPN V Y   I       +  +A KL+  M+ 
Sbjct: 603 AGFCNTGEMTRARALF----DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQENGDLK 560
             + PD   YT ++        M     L  +M + G   P+ V+   ++  Y +     
Sbjct: 659 RGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRD 718

Query: 561 SAFRCSEFLKE---SRIGSSE 578
            A +  E ++    SR+ SSE
Sbjct: 719 QAEKLYEEMRAKGLSRLCSSE 739



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 231/471 (49%), Gaps = 12/471 (2%)

Query: 112 LCGLVADV----VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           L  L+ DV    V + +LI        +  A  +F    D GIE  ++    L+  L  +
Sbjct: 125 LVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVED 184

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK----VADVNRALEFYHEMLHHNLQPN 223
           N++     +F  + + G  PN++TY  +M+ +C+      D+ RA E   ++      PN
Sbjct: 185 NRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPN 244

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+G  + GLCKVG    A     ++ +     N   +N +I G C+ G L EA  +  
Sbjct: 245 VVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFK 304

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM+   I PDV++Y+ILI G C  G+++ A  + ++M   GIL N+ +Y+ LIDG+CKEG
Sbjct: 305 EMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEG 364

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++KAL V  +M   G+ P+V ++S LIDG C+ G++D+A+  + EM   +  P    + 
Sbjct: 365 RVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYC 424

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +LI G  K       L+ ++ M +  + P     + ++    +    + AL   L +  +
Sbjct: 425 SLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALA--LSEKFQ 482

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            +G + +P    Y   I  +C      KA +L   M   N+ PD   Y+T++    +   
Sbjct: 483 ENGVHFNPYS--YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLN 540

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
               +ML   M K+GI  +     +++  +  +  +  A+R  + +KESR+
Sbjct: 541 SEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 253/552 (45%), Gaps = 29/552 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ +I    + G ++EA  V+++++   +LP + + + L++G  +KG+ D   E +
Sbjct: 279 NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVF 338

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM   G++ ++ +Y +LID  C +G V KAL +F+EM + GI P V  Y+ILI G C +
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             M  A   +  M      P+ + Y +L+ GY K      AL+ +  M    + P+ +  
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++   C+  +   A        + GV  N + YN  I   C+     +A+ L   M K
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PDV  Y+ LI         E A  L  KM K GI  NV TY  LI+ +  +  M+ 
Sbjct: 519 RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M E  V P+ + ++SL+ G C  G +  A  L+ EM  +   P+VV +T  I+
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
              K     +  +LY++M E  + P     + LI      G ++ A   F E   +   G
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE---G 695

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL-----------RPDNCTYTTMLR 516
            C+PN V+Y  +I +     +  +A KL+ +MR+  L               C +  +  
Sbjct: 696 RCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKT 755

Query: 517 GLL--RAKRMLDVMMLLADMIKMGIVPD------AVINQVMVRGYQENGDLKSAFRCSEF 568
           G L  RAK+ LD        +K  ++PD      A I+    R + +  ++ +     +F
Sbjct: 756 GKLGGRAKQGLDWRF----QVKYTLLPDSCGCAHAQIHDFYTRPFMQENNIFTISHVGKF 811

Query: 569 LKESRIGSSETE 580
           +      SS+++
Sbjct: 812 IFYENAKSSQSD 823


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 201/344 (58%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N L+ GL  KG+    + F++++V  G   D V+YG LI   C  G+   AL+L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              +  K ++   V+Y  +I+G+C +  + +A  ++  M   G+ PN+ TY+AL+ G+  
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  +  A++ +++++  N++P+  TF +L+DG CK  +++     F  M K G+ P++  
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+DG+     +  A S+ + M +  ++PD+ +YNILI G C + +++ A  L  +M+
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            + I+ NVVTYNSLIDG  K G +  AL +  QM ++GV PN++T++S+ID   K   +D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            A+ L T+   + + P +  +T LIDGL K G +K+   +++++
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 188/351 (53%), Gaps = 4/351 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P  +    LI GLC + ++ +A      +   G   +  +Y  L+ G CKV +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+    +    +Q N V +  ++ G+CK   +  A + +  M   G+ PN+  Y+ LI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
               G L +A+ L +++    I PD +T+NIL+ G C   +++  + +   M K+GI+ +
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVTYNSL+DGY    ++  A S+ + M + GV P++ +++ LI+G CK   +D AM L+ 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K+++P+VV + +LIDGLSK G +   L+L  +M +  + P++ T +S+I  LFK  
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           ++  A+    +  D+       P+   Y  +I  LC  G++  A  +F D+
Sbjct: 302 QVDKAIALITKFKDQG----IQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 188/344 (54%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   + +T   LI   C +G + +A    D+++  G     V Y  LIHGLC   +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             + + +    V  N   YN ++ G CK   VN A + Y EM+   + PNVVT+  L+ G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
              VG+L+ A + F  +    + P+ + +N L+DG CK   + E  ++ + M K  I PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V TYN L+ G   V ++  A+ +   M + G+  ++ +YN LI+G+CK   ++KA+++ +
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  K + PNVVT++SLIDG  K+G I  A+ L  +M  + + P+++ + ++ID L K  
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            + + + L  +  +  I PS++T + LI GL K GR+ +A N F
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 154/278 (55%), Gaps = 3/278 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDS 102
           ++ + N  +++T+I    +  H+ +A  +Y ++    + P +   +AL++G    GK   
Sbjct: 71  KLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKD 130

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
             + + +++L  +  D  T+ +L+D  C    + +   +F  M+ +GI P VV Y  L+ 
Sbjct: 131 AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVD 190

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G     ++  A+S+F +M + GV P++ +YN L++G+CK+  V++A+  ++EM   N+ P
Sbjct: 191 GYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP 250

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NVVT+  L+DGL K G +  A      M   GV PNI  YN +ID   K   + +A++L 
Sbjct: 251 NVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALI 310

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           ++ +   I P ++TY ILI GLC  G+L+ A  + + +
Sbjct: 311 TKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 4/349 (1%)

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PN +T   L+ GLC  G++  A  F   +   G   +   Y  LI G CK G    A+ 
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L   ++   +  +   YN +I G+C    +  A  L  +M  +GI  NVVTY++LI G+ 
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G ++ A+ + +++  + ++P+  TF+ L+DG CK   +     ++  M+ + ++PDVV
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            + +L+DG      +     ++  M +  + P + + + LI+G  K  ++  A+N F E 
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             K       PN V Y ++I  L   G+I  A +L   M    + P+  TY +++  L +
Sbjct: 244 HCKN----IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 299

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
             ++   + L+      GI P      +++ G  + G LK A    E L
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  PN +T ++LI G C  G I  A   + ++V      D V +  LI GL K G  +  
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L L + +    +  +    +++I+G+ K+  +++A + + E   K      SPN V Y+A
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG----ISPNVVTYSA 117

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I      G++  A  LF+ +  +N++PD  T+  ++ G  + ++M +   + A M+K G
Sbjct: 118 LISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 177

Query: 539 IVPDAVINQVMVRGYQ 554
           I+PD V    +V GY+
Sbjct: 178 IIPDVVTYNSLVDGYR 193


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 228/468 (48%), Gaps = 13/468 (2%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           W   + +    +   N     LI+ G+ +  +  ++E     L+ D +TYG+LI   C  
Sbjct: 79  WAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNF 138

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G +  A +L++EM+D+G+ P V+    L++ LC    +  A   F  M     +P   T+
Sbjct: 139 GKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM---SSIPCAATW 195

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             L+DG  +   V+ A  ++ EM H  + PN  T+ V+++GL K G++  A      M  
Sbjct: 196 TILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMP- 253

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               P +  Y  +I GHCKAG++ +A  L  +M++     D  TYN LI G C + +++ 
Sbjct: 254 ---VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDR 310

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLI 371
           A  LL++M     + ++ TY+ LI G C+   + +A  +   +  E    PNVV++++LI
Sbjct: 311 AYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLI 370

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG  KA  ++ A  L+ EMV     PDVV ++ LI GL   G   E     +EM+  KI 
Sbjct: 371 DGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKIL 430

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P V   SS+I GL + G +  A   F    D      C PN  +Y ++I  LC  G++  
Sbjct: 431 PKVPVYSSVISGLCRAGELDAASTVF----DSMVANGCQPNLAVYNSLIYGLCKTGRLCD 486

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           A     +M      PD  TY T++ GL R  R  +   L    ++ GI
Sbjct: 487 AKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 258/575 (44%), Gaps = 40/575 (6%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLP 82
           + L ++ +    CY  F  +    IP  N   ++ +I    + G + EA  V +++ V P
Sbjct: 200 DGLFRAIRVDEACY-YFEEMKHTAIP--NNWTYTVVINGLVKAGKVAEAERVLQEMPV-P 255

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            +    +++ G  K G     +   E+M   G   D +TY  LI   C   ++ +A  L 
Sbjct: 256 TLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELL 315

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCK 201
           +EM      P +  Y ILI GLC   ++ EA  +  ++R E    PN+ +YN L+DG+ K
Sbjct: 316 EEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSK 375

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
            A VN A + + EM+     P+VVT+  L+ GLC  G    A ++   M    + P + V
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV 435

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ +I G C+AG L  A ++   M      P++  YN LI GLC  G+L  A+  +++M 
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMT 495

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE-------------------- 361
           + G   + VTY +LI G C+    ++A  +  +  E+G+E                    
Sbjct: 496 ERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQ 555

Query: 362 ------------PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
                       P    ++++I+  CK  N+  A  L  +M+   + PD     AL+  +
Sbjct: 556 RVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAM 615

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +       +   +EM+     PSV T S+L++ LFK G+ S A          T    C
Sbjct: 616 CRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTS---C 672

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ + Y  +I A     Q+ +A  +  +++S         Y T+L+GL R + +  V  
Sbjct: 673 FPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYE 732

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LL +M +   V +     ++++G+   G    A R
Sbjct: 733 LLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVR 767



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 177/441 (40%), Gaps = 72/441 (16%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  FS+   + +A  ++ ++      P +   + L+ GL   G+      + EEMV
Sbjct: 366 YNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMV 425

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              ++  V  Y  +I   C  G++  A  +FD M+  G +P + +Y  LI+GLC   ++ 
Sbjct: 426 GKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLC 485

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ---------- 221
           +A+   + M E G  P+  TY  L+ G C+ +  + A + Y   L   ++          
Sbjct: 486 DAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI 545

Query: 222 ----------------------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
                                 P    +  +++ LCK   L  A      M   G+ P+ 
Sbjct: 546 ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDG 605

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG----------- 308
              + L+   C+      AM+   EM +    P V TY+ L+  L   G           
Sbjct: 606 STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRR 665

Query: 309 -------------------------QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
                                    Q+E A  +LQ++  +  + ++V YN+L+ G  +  
Sbjct: 666 LISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTR 725

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +++    +  +M       N  TF+ LI G C+ G  D A+ + +EM  K L P   +  
Sbjct: 726 NLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSAAIIK 784

Query: 404 ALIDGLSKDGNMKETLRLYKE 424
            L+D L++    +E+  L K 
Sbjct: 785 FLVDELARAEREQESKDLVKR 805



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 13/308 (4%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +  YNC  +   + G   EA  L  E    E+ PD  TY ILI+GLC  G+L+ A  L 
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M   G+   V+T   L++  CK G++E AL    +M+     P   T++ LIDG  +A
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRA 205

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +D A   + EM   + +P+   +T +I+GL K G + E  R+ +EM      P++   
Sbjct: 206 IRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANY 260

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +S+I G  K G +  A +      D    GY   N + Y  +I   C   +I +A +L  
Sbjct: 261 TSVIGGHCKAGDMGKAYHLL---EDMKRKGYQGDN-LTYNTLIHGHCRLQEIDRAYELLE 316

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI-KMGIVPDAVINQVMVRGYQEN 556
           +M+S++  PD  TY  ++ GL RAKR+ +   LL  +  +    P+ V    ++ G+ + 
Sbjct: 317 EMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKA 376

Query: 557 GDLKSAFR 564
             +  A++
Sbjct: 377 ARVNDAYQ 384



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 39/367 (10%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSV 103
           +PK    V+S++I      G ++ A  V+  +      P +   N+L+ GL K G+    
Sbjct: 430 LPKV--PVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE------------ 151
               +EM   G   D VTYG LI   C      +A +L+   +++GIE            
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547

Query: 152 --------------------PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                               PT   Y  +I  LC EN + EA  +   M   G+ P+  T
Sbjct: 548 LRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGST 607

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM- 250
            +AL+   C+      A+ F  EM+    +P+V T+  L++ L K G+   A      + 
Sbjct: 608 VDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
           +    FP+   Y  LI  +     + EA ++  E++       +  YN L+KGL     L
Sbjct: 668 SHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNL 727

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           +    LL++M +   + N  T+N LI G+C+ G  ++A+ V S+M +K + P+      L
Sbjct: 728 QMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFL 786

Query: 371 IDGQCKA 377
           +D   +A
Sbjct: 787 VDELARA 793



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 6/128 (4%)

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           V  ++H + KNG   +A+ FF     + D  +    H  Y    +AL   GQ  +A +LF
Sbjct: 60  VGVILH-MVKNG--ESAMVFFGWAGTRQD--FRHTVHT-YNCFYEALIRTGQCEEAYRLF 113

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +     L PD+ TY  ++RGL    ++     L  +M+  G+ P  +  + ++    ++
Sbjct: 114 KEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKS 173

Query: 557 GDLKSAFR 564
           G+L+ A R
Sbjct: 174 GNLELALR 181


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 269/570 (47%), Gaps = 65/570 (11%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           + N  VF+ L+    +   ++EA    LW   +    P + + N L+ G   + + +   
Sbjct: 227 RVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEAL 286

Query: 105 EFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           E    M          DVV+Y  +I+    +G V KA NLF +MID+GI P VV Y  +I
Sbjct: 287 ELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVI 346

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC    +  A+++F+ M + GV P+  TYN L+ GY         +    EM  H+L+
Sbjct: 347 DGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLE 406

Query: 222 PNVVTFGVLMDGLCKVGELRAAGN---------------------FFVHMAKFGVFPNIF 260
           P+   + +L+D LCK G    A N                      F  M + G+ PN+ 
Sbjct: 407 PDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVV 466

Query: 261 VYNCLIDGHCKAGNLFEAM-----------SLCSEMEKFE-------------ISPDVFT 296
            Y  LID  CK G + +A+            LC+ +EK+E             I  DV  
Sbjct: 467 NYGALIDALCKLGRVDDAILKFNQMINEVYGLCT-VEKWEKAEELVFEMLDQGIRLDVVV 525

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +N L+  LC  G++  A+ L++ M + G+  +V++YN+L+DG+C  G  ++A  +   M 
Sbjct: 526 FNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMV 585

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G++PN  T+++L+ G CKA  ID A  L  EM++    PDVV +  ++ GL + G   
Sbjct: 586 SIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFS 645

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN---H 473
           E   LY  M+ ++    ++T + +++GL KN  +  A   F           CS     H
Sbjct: 646 EAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMF--------QSLCSKGLQLH 697

Query: 474 VL-YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
           ++ +  +I AL   G+   A  LF+ + +  L PD  TY  +   L++   + ++ +L +
Sbjct: 698 IITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFS 757

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            M + G  P++ +   +VR +   GD+  A
Sbjct: 758 AMEENGTAPNSRMLNALVRRFLHRGDISRA 787



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 237/539 (43%), Gaps = 61/539 (11%)

Query: 83  AIQACNALLNGLIKKGKFDSVWE------FYEEMVL-CG--LVADVVTYGVLIDCCCGQG 133
           ++ A N LL  + +     S  E       ++ MV  C   +  D  TY +LI C C  G
Sbjct: 150 SVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMG 209

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTY 192
            +     +F  ++  G     +++  L+ GLC+  ++ EA + +   M E G  PN+ +Y
Sbjct: 210 RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSY 269

Query: 193 NALMDGYCKVADVNRALEFYHEMLHH---NLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           N L+ G+C       ALE  H M      +  P+VV++  +++G  + G++  A N F+ 
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+ P++  YN +IDG CKA  +  A ++  +M    + P   TYN LI G    G+
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD---------------------MEKA 348
            +    LL++M    +  +   Y  L+D  CK G                      +++A
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEA 449

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM-----------GLYT--------- 388
           + +  +M ++G+ PNVV + +LID  CK G +D A+           GL T         
Sbjct: 450 VCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEE 509

Query: 389 ---EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
              EM+ + +  DVVVF  L+  L ++G + E  RL + ML   + P V + ++L+ G  
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
             GR   A        D        PN   Y  ++   C   +I  A  L  +M  +   
Sbjct: 570 LTGRTDEAAKLL----DVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD  TY T+L GL +  R  +   L  +MI      D     +++ G  +N  +  AF+
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFK 684



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 219/479 (45%), Gaps = 53/479 (11%)

Query: 36  YSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNAL 90
           Y++F  +    IP   P V  ++T+I    +   ++ A  V++++    V P+    N L
Sbjct: 324 YNLFLQMIDRGIP---PDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCL 380

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G +  GK+  V    EEM    L  D   Y +L+D  C  G   +A N+FD +I KGI
Sbjct: 381 IHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGI 440

Query: 151 EP---------------------TVVIYTILI-----------------------HGLCN 166
           +P                      VV Y  LI                       +GLC 
Sbjct: 441 KPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCT 500

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             K  +AE +   M + G+  ++  +N LM   C+   V  A      ML   ++P+V++
Sbjct: 501 VEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVIS 560

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG C  G    A      M   G+ PN F YN L+ G+CKA  + +A SL  EM 
Sbjct: 561 YNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREML 620

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
               +PDV TYN ++ GL   G+   A+ L   M       ++ TYN +++G CK   ++
Sbjct: 621 MNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVD 680

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +   +  KG++ +++TF+ +I    K G  + AM L+  +    LVPDV  +  + 
Sbjct: 681 EAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIA 740

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           + L K+G+++E   L+  M E    P+   +++L+      G IS A   +L K D+ +
Sbjct: 741 ENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA-GAYLSKLDEKN 798



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 184/399 (46%), Gaps = 29/399 (7%)

Query: 90  LLNGLIKKG-KFDSVWE----FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD- 143
           + + +I+KG K D++ +     +++M   GL  +VV YG LID  C  G V  A+  F+ 
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 144 ----------------------EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
                                 EM+D+GI   VV++  L+  LC E +++EA+ +   M 
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             GV P++ +YN L+DG+C     + A +    M+   L+PN  T+  L+ G CK   + 
Sbjct: 551 RVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRID 610

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A +    M   G  P++  YN ++ G  + G   EA  L   M       D++TYNI++
Sbjct: 611 DAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC    ++ A  + Q +  +G+  +++T+N +I    K G  E A+ + + ++  G+ 
Sbjct: 671 NGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLV 730

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+V T+  + +   K G+++    L++ M      P+  +  AL+      G++      
Sbjct: 731 PDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAY 790

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
             ++ E   +    T S LI  L+  G          EK
Sbjct: 791 LSKLDEKNFSLEASTASMLI-SLYSRGEYQQLAKSLPEK 828



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 180/399 (45%), Gaps = 30/399 (7%)

Query: 3   YVLANAKLYKNARCL-IKDVTENLL-KSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTL 58
           Y L    L KN RC   +++ ++++ K  KP  +        + +     +P+V  +  L
Sbjct: 412 YALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGAL 471

Query: 59  IIAFSEMGHIEEALWVYRKI---------------------EVLPA-----IQACNALLN 92
           I A  ++G +++A+  + ++                     E+L       +   N L+ 
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L ++G+        E M+  G+  DV++Y  L+D  C  G   +A  L D M+  G++P
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  L+HG C   ++ +A S+ R M   G  P++ TYN ++ G  +    + A E Y
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELY 651

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M++   Q ++ T+ ++++GLCK   +  A   F  +   G+  +I  +N +I    K 
Sbjct: 652 LNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKG 711

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G   +AM L + +  + + PDV TY ++ + L   G LE    L   M + G   N    
Sbjct: 712 GKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRML 771

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           N+L+  +   GD+ +A +  S++ EK       T S LI
Sbjct: 772 NALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 3/291 (1%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VF+TL+      G + EA   + +  ++ V P + + N L++G    G+ D   +  + M
Sbjct: 525 VFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVM 584

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  GL  +  TY  L+   C    +  A +L  EM+  G  P VV Y  ++HGL    + 
Sbjct: 585 VSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRF 644

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA+ ++ +M       ++YTYN +++G CK   V+ A + +  +    LQ +++TF ++
Sbjct: 645 SEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIM 704

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  L K G+   A + F  ++ +G+ P++  Y  + +   K G+L E   L S ME+   
Sbjct: 705 IGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGT 764

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           +P+    N L++     G +  A   L K+ ++       T + LI  Y +
Sbjct: 765 APNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 11/251 (4%)

Query: 327 ANVVTYNSLIDGYCKEGDMEKAL------SVCSQMTEK---GVEPNVVTFSSLIDGQCKA 377
           A+V  +N L+    +       L      S+  +M  +    V P+  T+S LI   C+ 
Sbjct: 149 ASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRM 208

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR-LYKEMLEAKITPSVFT 436
           G ++    ++  ++      + +VF  L+ GL     + E    L   M E   TP+V +
Sbjct: 209 GRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVS 268

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++L+ G     R   AL       D   G  C P+ V Y  +I     +GQ+ KA  LF
Sbjct: 269 YNTLVKGFCNENRAEEALELLHVMADD-QGLSCPPDVVSYNTVINGFFREGQVDKAYNLF 327

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M    + PD  TY T++ GL +A+ +     +   M+  G+ P       ++ GY   
Sbjct: 328 LQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLST 387

Query: 557 GDLKSAFRCSE 567
           G  K   R  E
Sbjct: 388 GKWKEVVRLLE 398


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 258/540 (47%), Gaps = 54/540 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEE 109
            ++  I +F +      AL + R +  L     A+  C  ++ GL   G+ D   E ++E
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYC-TVVAGLYDSGEHDHARELFDE 206

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE-- 167
           M+   L  DVV +  L+   C +G V ++  L  +++ +G+ P +  + I + GLC E  
Sbjct: 207 MLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGA 266

Query: 168 -------NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK---VADVNR---------- 207
                  +++VEAE   R M   G  P+  TYN+++DGYCK   V D NR          
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGF 326

Query: 208 ----------------------ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
                                 A+  + + L   L+P++V +  L+ GL + G +  A  
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               MA+ G  PNI+ YN +I+G CK G + +A  L  +       PD+FTYN LI G C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
              +L+ A  ++ +M+ +G+  +V+TYN+L++G CK G  E+ + +   M EKG  PN++
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ ++D  CKA  ++ A+ L  EM  K L PDVV F  L  G  K G++    +L++ M
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 426 -LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
             +  +  +  T + ++    +   ++ A+  F     K  G  C P++  Y  +I   C
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF--SVMKNSG--CDPDNYTYRVVIDGFC 622

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G I +  K   +       P   T+  +L  L    ++ + + ++  M++ GIVP+ V
Sbjct: 623 KMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 259/551 (47%), Gaps = 52/551 (9%)

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G ++EA+  + +++     P++ + NA++N L++ G  +   + Y  M   G+ +D
Sbjct: 86  YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145

Query: 119 VVTYGVLIDCCC-----------------------------------GQGDVMKALNLFD 143
           V TY + I   C                                     G+   A  LFD
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM+ + + P VV +  L+H LC +  + E+E +   + + GV PNL+T+N  + G C+  
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREG 265

Query: 204 DVNRAL---------EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            ++RA+         E+  +M++   +P+ +T+  ++DG CK G ++ A          G
Sbjct: 266 ALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P+ F Y  LI+G CK G+   AM++  +     + P +  YN LIKGL   G +  A 
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+ +M + G L N+ TYN +I+G CK G +  A  +      KG  P++ T+++LIDG 
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   +D+A  +   M  + + PDV+ +  L++GL K G  +E + ++K M E   TP++
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + ++  L K  +++ A++   E   K       P+ V +  +    C  G I  A +
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKG----LKPDVVSFGTLFTGFCKIGDIDGAYQ 561

Query: 495 LFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           LF  M    ++     TY  ++        M   M L + M   G  PD    +V++ G+
Sbjct: 562 LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621

Query: 554 QENGDLKSAFR 564
            + G++   ++
Sbjct: 622 CKMGNITQGYK 632



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 253/544 (46%), Gaps = 25/544 (4%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI-- 95
           +FN+  S +  K   S +  ++      G  EE   +  ++         NALL G    
Sbjct: 26  MFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE----NVNNALLEGAYIE 81

Query: 96  ------KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
                 +KGK     + +E M        V ++  +++     G   +A  ++  M D+G
Sbjct: 82  AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++  V  YTI I   C   +   A  + R+M E G   N   Y  ++ G     + + A 
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E + EML   L P+VV F  L+  LCK G +  +      + K GV PN+F +N  + G 
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261

Query: 270 CKAGNLFEAM--SLCSEMEKF-------EISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           C+ G L  A+  S   E E++          PD  TYN +I G C  G ++ A  +L+  
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +  TY SLI+G+CK+GD ++A++V      KG+ P++V +++LI G  + G I
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A+ L  EM     +P++  +  +I+GL K G + +   L  + +     P +FT ++L
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  K  ++ +A     E  ++      +P+ + Y  ++  LC  G+  +  ++F  M 
Sbjct: 442 IDGYCKQLKLDSA----TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
                P+  TY  ++  L +AK++ + + LL +M   G+ PD V    +  G+ + GD+ 
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557

Query: 561 SAFR 564
            A++
Sbjct: 558 GAYQ 561



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 203/449 (45%), Gaps = 29/449 (6%)

Query: 132 QGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           Q D +KAL +F+    + G + T   Y  ++  L +  +  E E +   MRE        
Sbjct: 17  QTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE-------N 69

Query: 191 TYNALMDG--------YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
             NAL++G        Y +   V  A++ +  M  +N  P+V +   +M+ L + G    
Sbjct: 70  VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQ 129

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A   ++ M   GV  +++ Y   I   CK    + A+ L   M +     +   Y  ++ 
Sbjct: 130 AHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVA 189

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G+ + A  L  +M    +  +VV +N L+   CK+G + ++  +  ++ ++GV P
Sbjct: 190 GLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249

Query: 363 NVVTFSSLIDGQCKAGNIDAAMG---------LYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           N+ TF+  + G C+ G +D A+             +MV     PD + + ++IDG  K G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            +++  R+ K+ +     P  FT  SLI+G  K+G    A+  F +   K       P+ 
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG----LRPSI 365

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           VLY  +I+ L   G IL A +L ++M  +   P+  TY  ++ GL +   + D   L+ D
Sbjct: 366 VLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDD 425

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            I  G  PD      ++ GY +   L SA
Sbjct: 426 AIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 242/476 (50%), Gaps = 4/476 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +   ++NGL+++G+ D  +  ++EM+  G+  + +TY  L+   C  G   +A+ +
Sbjct: 204 PDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGI 263

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +M   G+EP VV Y  L+  LC   + +EA  +F SM + G  P+   Y  L+ GY  
Sbjct: 264 FRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYAT 323

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              + +  +    M+ +  QP+   F +L+    K G +  A   F  M + G+ PNI  
Sbjct: 324 EGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  ++D  C+ G + +AMS    +    ++P+   +  LI GLC   + + AE L  +M 
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMI 443

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI  N + +N+L++  CKEG + +A ++   M    V+ +V+T+++LIDG C  G +D
Sbjct: 444 GRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L   MV+  + P+ V +  +I+G  K+G +++   L+++M    + P +   S+++
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HGLF+  RI+ A   +L        G   P    Y  I+Q LC +     A ++F ++  
Sbjct: 564 HGLFQTRRIAAAKELYLW---MIKCGIKLPIGT-YNIILQGLCQNNCTDDALRMFHNLCL 619

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +    N T+  M+  LL+  R  +   L A ++  G+VP+ V   +M++   E G
Sbjct: 620 IDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 257/553 (46%), Gaps = 33/553 (5%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLI----------IAFSEMGHIEEALWVYRK 77
           +R+   V  S+FN      +P+ +   +S +I          +AF+ +G +    W  + 
Sbjct: 77  ARESPAVALSLFN-----RMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQA 131

Query: 78  IEVLPAIQACNALLNGLIK-KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           I   P       LL GL   K   D++      M   G   +  +Y +L+   C +    
Sbjct: 132 ITFSP-------LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQ 184

Query: 137 KALNLFDEMIDK----GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           +AL+L   M+      G  P VV YT +I+GL  E ++ +A  +F  M + G+ PN  TY
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITY 244

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L+ GYC       A+  + +M    ++P+VVT+  LM  LCK G    A   F  M K
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P+  +Y  L+ G+   G L +   L   M +    PD + +NILI      G ++ 
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDE 364

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A     KM ++G+  N+VTY +++D  C+ G ++ A+S   ++  +G+ PN V F +LI 
Sbjct: 365 AMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIH 424

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C     D A  L  EM+ + + P+ + F  L++ L K+G +     ++  M+   +  
Sbjct: 425 GLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQC 484

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            V T ++LI G   +G++  A           DG    PN V Y  II   C +G+I  A
Sbjct: 485 DVITYTTLIDGYCLDGKVDEATKLLEGMV--LDG--VKPNEVTYNTIINGYCKNGRIEDA 540

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-VPDAVINQVMVR 551
             LF  M S  + P    Y+T+L GL + +R+     L   MIK GI +P    N ++++
Sbjct: 541 CSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYN-IILQ 599

Query: 552 GYQENGDLKSAFR 564
           G  +N     A R
Sbjct: 600 GLCQNNCTDDALR 612



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 254/518 (49%), Gaps = 21/518 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I      G +++A  ++ ++    + P     N LL+G    GK       + +M 
Sbjct: 209 YTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMC 268

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  DVVTY  L+   C  G  M+A  +FD M+ KG +P   IY  L+HG   E  +V
Sbjct: 269 RDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLV 328

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   M   G  P+ Y +N L+  Y K   V+ A+  + +M    L PN+VT+G +M
Sbjct: 329 QMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVM 388

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LC+VG++  A + F  +   G+ PN  V+  LI G C      +A  L  EM    I 
Sbjct: 389 DALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC 448

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+   +N L+  LC  G +  A+ +   M +  +  +V+TY +LIDGYC +G +++A  +
Sbjct: 449 PNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL 508

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   GV+PN VT++++I+G CK G I+ A  L+ +M  K + P +V+++ ++ GL +
Sbjct: 509 LEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-------LEKTDKT 464
              +     LY  M++  I   + T + ++ GL +N    +AL  F           ++T
Sbjct: 569 TRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT 628

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                      +  +I AL   G+  +A  LF+ + +  L P+  TY  M++ L+    +
Sbjct: 629 -----------FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLL 677

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++  L   + K G   D+ +   +V    + G+++ A
Sbjct: 678 EELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 205/454 (45%), Gaps = 39/454 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K + S++ TL+  ++  G++    + L V  +    P     N L+    K G  D    
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAML 367

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M   GL  ++VTYG ++D  C  G V  A++ FD +I +G+ P  V++  LIHGLC
Sbjct: 368 AFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLC 427

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K  +AE +   M   G+ PN   +N L++  CK   V RA   +  M+  ++Q +V+
Sbjct: 428 ACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVI 487

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+DG C  G++  A      M   GV PN   YN +I+G+CK G + +A SL  +M
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQM 547

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC----- 340
               ++P +  Y+ ++ GL    ++  A+ L   M K GI   + TYN ++ G C     
Sbjct: 548 ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCT 607

Query: 341 ------------------------------KEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                                         K G  ++A  + + +  +G+ PNVVT+  +
Sbjct: 608 DDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 667

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +    + G ++    L+  +       D  +  AL+  L + G +++      ++ E   
Sbjct: 668 MKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNF 727

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +    T  SL+  L  +G+    +N   EK   T
Sbjct: 728 SLEASTAESLVF-LVSSGKYDQHINSIPEKYRPT 760



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 214/499 (42%), Gaps = 81/499 (16%)

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           AD+ TY ++I CC   G +  A      +I  G     + ++ L+ GLC++ +  +A  +
Sbjct: 94  ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDI 153

Query: 177 -FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
             R M   G  P                                   N  ++ +L+ GLC
Sbjct: 154 ALRRMPALGCTP-----------------------------------NAFSYNILLKGLC 178

Query: 236 KVGELRAAGNFFVHM----AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
                + A +    M     + G  P++  Y  +I+G  + G L +A  L  EM    +S
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  TYN L+ G C  G+ + A G+ +KM ++G+  +VVTYN+L+   CK G   +A  V
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M +KG +P+   + +L+ G    G +     L   MV     PD  +F  LI   +K
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E +  + +M +  + P++ T  +++  L + G++ +A++ F    D+      +P
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQF----DRLISEGLTP 414

Query: 472 NHVLYAAIIQALCY-----------------------------------DGQILKASKLF 496
           N V++  +I  LC                                    +G + +A  +F
Sbjct: 415 NGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIF 474

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
             M   +++ D  TYTT++ G     ++ +   LL  M+  G+ P+ V    ++ GY +N
Sbjct: 475 DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKN 534

Query: 557 GDLKSAFRCSEFLKESRIG 575
           G ++ A  CS F + +  G
Sbjct: 535 GRIEDA--CSLFRQMASKG 551


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 196/348 (56%), Gaps = 4/348 (1%)

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           EFY E+L +   PNV  F +LM G CK+G++  A   F  +++ G+ P++  +N LI G+
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C++ N+ E   L S ME   ISPDVFTY+ LI GLC   ++E A GL  +M + G++ N 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT+ +LIDG CK G ++ AL     M ++G+ P+++T+++LI+G C+ G++  A  L  E
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+     PD + FT L+DG  KDG+M   L +   M+E  I       ++LI GL ++GR
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           + +A        D    G+  P+   Y  +I   C  G +   +KL  +M+ D   P   
Sbjct: 452 VRDAERML---KDMLSAGH-KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVV 507

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           TY  ++ G  +  +M +  MLL  M+ M +VP+ +   +++ G+ ++G
Sbjct: 508 TYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 211/400 (52%), Gaps = 6/400 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIK-KGKFDSVWEFYE 108
           VF  LIIA+++   IE+A+   R ++     +P +  C+ LL  ++K   +    WEFY 
Sbjct: 157 VFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIP-VCGCDYLLRRVMKLNQQPGHCWEFYL 215

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E++  G   +V  + +L+   C  GDVM A  +FDE+  +G+ P+VV +  LI G C   
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + E   +   M    + P+++TY+AL++G CK + V  A   + EM    L PN VTF 
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+DG CK G++  A   F  M   G+ P++  YN LI+G C+ G+L EA  L +EM   
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD  T+  L+ G C  G ++ A  +  +M +EGI  + V + +LI G C++G +  A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   M   G +P+  T++ +ID  CK G++     L  EM     VP VV + AL++G
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
             K G MK    L   ML  ++ P+  T + L+ G  K+G
Sbjct: 516 FCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 155/288 (53%), Gaps = 7/288 (2%)

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E+  +   P+V+ +NIL+ G C +G +  A  +  ++ + G+  +VV++N+LI GYC+  
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++E+   + S M  + + P+V T+S+LI+G CK   ++ A GL+ EM    LVP+ V FT
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDG  K G +   LR ++ M +  I P + T ++LI+GL ++G +  A     E    
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI-- 393

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
             G    P+ + +  ++   C DG +  A ++   M  + +  D+  +T ++ GL R  R
Sbjct: 394 --GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           + D   +L DM+  G  PD     +++  + + GD+K     ++ LKE
Sbjct: 452 VRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMG---AKLLKE 496



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 163/311 (52%), Gaps = 11/311 (3%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++ V++ LI  +  +  + +A+     ++K   S  V   + L++    V +L    G  
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRR---VMKLNQQPGHC 210

Query: 318 QKMYKE----GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
            + Y E    G   NV  +N L+ G+CK GD+  A  V  +++ +G+ P+VV+F++LI G
Sbjct: 211 WEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISG 270

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C++ N++    L + M  + + PDV  ++ALI+GL K+  ++E   L+ EM E  + P+
Sbjct: 271 YCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T ++LI G  K+G+I  AL  F    D+       P+ + Y A+I  LC DG + +A 
Sbjct: 331 GVTFTTLIDGQCKHGKIDLALRNFEIMKDRG----IRPDLITYNALINGLCRDGDLKEAR 386

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           KL ++M  +  +PD  T+TT++ G  +   M   + +   M++ GI  D V    ++ G 
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446

Query: 554 QENGDLKSAFR 564
             +G ++ A R
Sbjct: 447 CRDGRVRDAER 457



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 4/221 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ + G  PNV  F+ L+ G CK G++  A  ++ E+  + L P VV F  LI G  +  
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           N++E   L   M   +I+P VFT S+LI+GL K  R+  A   F E  +        PN 
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG----LVPNG 331

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C  G+I  A + F  M+   +RPD  TY  ++ GL R   + +   LL +
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           MI  G  PD +    ++ G  ++GD+ SA    + + E  I
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 248/521 (47%), Gaps = 14/521 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWV-YRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
            FS L+ A  +     EA+ +  R++ VL   P + +   LL GL  + +          
Sbjct: 128 TFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHT 187

Query: 110 MVLC-----GLVADVVTYGVLIDCCCGQGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHG 163
           M++      G   DVV+Y  +I+    +G  +  A +LFD+M+D+G+ P VV Y  +I  
Sbjct: 188 MMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISA 247

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           L     M +A  +   M + G +PN  T+N+L+ GYC     N A+  +  M    ++P+
Sbjct: 248 LSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPD 307

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+  LM  LCK G    A   F  M K G  PN   Y  L+ G+   G+L +   L  
Sbjct: 308 VFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLD 367

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M +  I PD + +NILI      G+++ A  L  KM ++G+  + VTY  ++D  C  G
Sbjct: 368 MMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVG 427

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A++   ++  +G+ P+ V F +LI G C     D A  L  EM+ + + P+ + F 
Sbjct: 428 KVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFN 487

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L++ L K+G +     ++  M+   +   V T ++LI G   +G++  A          
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV-- 545

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
            DG    PN V Y  +I   C +G+I  A  LF  M S  + P   TY+T+L+GL +A+R
Sbjct: 546 LDG--VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARR 603

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                 L   MIK GI  D     +++ G  +N     A R
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALR 644



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 240/494 (48%), Gaps = 11/494 (2%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           + +V P +   + +++   + G  D  +     ++  G  A+ +T+  L+   C +    
Sbjct: 84  RPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTS 143

Query: 137 KALNL-FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-----RECGVVPNLY 190
           +A+++    M   G  P V  YTIL+ GLC+EN+  +A  +  +M        G  P++ 
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203

Query: 191 TYNALMDGYCKVA-DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           +YN +++G  +    ++ A   + +ML   L P+VVT+  ++  L K   +  A    V 
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M K G  PN   +N L+ G+C +G   +A+ +   M +  + PDVFTYN L+  LC  G+
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A  +   M K G   N  TY +L+ GY  EG + K   +   M   G++P+   F+ 
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI    K G +D AM L+++M  + L PD V +  ++D L   G + + +  +  ++   
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           +TP      +LIHGL    +   A    +E   +   G C PN++ +  ++  LC +G +
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGR---GIC-PNNIFFNTLLNHLCKEGMV 499

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A  +F  M   +++ D  TY T++ G     ++ +   LL  M+  G+ P+ V    M
Sbjct: 500 ARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTM 559

Query: 550 VRGYQENGDLKSAF 563
           + GY +NG ++ AF
Sbjct: 560 INGYCKNGRIEDAF 573



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 266/550 (48%), Gaps = 18/550 (3%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI 78
           V   LL+  +     Y +F+ +        +P V  ++++I A S+   +++A  V  ++
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLD---QGLSPDVVTYNSIISALSKARAMDKAAVVLVRM 264

Query: 79  ---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
                +P     N+LL+G    GK +     ++ M   G+  DV TY  L+   C  G  
Sbjct: 265 VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           M+A  +FD M+ +G +P    Y  L+HG   E  +V+   +   M   G+ P+ Y +N L
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +  Y K   V+ A+  + +M    L P+ VT+G++MD LC VG++  A   F  +   G+
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL 444

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+  V+  LI G C      +A  L  EM    I P+   +N L+  LC  G +  A+ 
Sbjct: 445 TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M +  +  +V+TYN+LIDGYC  G +++A  +   M   GV+PN VT++++I+G C
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G I+ A  L+ +M  K + P +V ++ ++ GL +         LY  M+++ I   + 
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV---LYAAIIQALCYDGQILKA 492
           T + ++ GL +N    +AL  F          Y    H+    +  +I AL   G+  +A
Sbjct: 625 TYNIILLGLCQNNCTDDALRIF-------QNLYLIDFHLENRTFNIMIDALLKGGRHDEA 677

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             LF+ + +  L P+  TY  M++ L+    + ++  L   + K G   ++ +   +V  
Sbjct: 678 KDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGK 737

Query: 553 YQENGDLKSA 562
             + G+++ A
Sbjct: 738 LLQKGEVRKA 747



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 203/450 (45%), Gaps = 39/450 (8%)

Query: 49  KFNPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N + + TL+  ++  G +      L +  +  + P     N L+    K GK D    
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAML 399

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M   GL  D VTYG+++D  C  G V  A+  F  +I +G+ P  V++  LIHGLC
Sbjct: 400 LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLC 459

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +K  +AE +   M   G+ PN   +N L++  CK   V RA   +  M+  ++Q +V+
Sbjct: 460 ARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVI 519

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+DG C  G++  A      M   GV PN   YN +I+G+CK G + +A SL  +M
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM 579

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC----- 340
               ++P + TY+ +++GL    +   A+ L   M K GI  ++ TYN ++ G C     
Sbjct: 580 ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCT 639

Query: 341 ------------------------------KEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                                         K G  ++A  + + +  +G+ PNVVT+  +
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +    + G ++    L+  +       +  +  AL+  L + G +++      ++ E   
Sbjct: 700 MKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNF 759

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           +    T  SL+  L  +G+    +N   EK
Sbjct: 760 SLEASTAESLVL-LVSSGKYDQHINAIPEK 788



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 13/385 (3%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF- 246
           NL       +      D + A   + E+LH     ++V     +    +     A   F 
Sbjct: 18  NLMKLQGRQEAAAAGTDSHHAHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAISLFR 77

Query: 247 -FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
             V +A+  V PN+  Y+ +ID   + G+L  A +    + +   + +  T++ L+K LC
Sbjct: 78  RMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC 137

Query: 306 GVGQL-EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-----TEKG 359
              +  E  +  L++M   G   NV +Y  L+ G C E   ++AL +   M     T  G
Sbjct: 138 DKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGG 197

Query: 360 VEPNVVTFSSLIDGQCKAG-NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
             P+VV+++++I+G  + G  +D A  L+ +M+ + L PDVV + ++I  LSK   M + 
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
             +   M++    P+  T +SL+HG   +G+ ++A+  F  K    DG    P+   Y  
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVF--KRMCRDG--VEPDVFTYNT 313

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++  LC +G+ ++A K+F  M     +P++ TY T+L G      ++ +  LL  M++ G
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG 373

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           I PD  I  +++  Y ++G +  A 
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAM 398


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 208/428 (48%), Gaps = 5/428 (1%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
            V+P     N + +G  K G+ + V E Y+ MV  G       YG+LI C C  G+  +A
Sbjct: 5   RVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             L   M  K  +   + Y+ +I+ LC  N++ EA  +   M      P+  TY  +++ 
Sbjct: 65  YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVER 123

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   ++ AL    EM    ++P+   +  ++ GLC+  ++  A   F  M K  + PN
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  YN LI+G CKA  +  A  L  EM      P   +YN LI G C    L  A+ +  
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM +   + NVVTY +LIDG  K G ++ A  V   M +KGV PNV T+S LIDG CK  
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  L  +MV + + P VV +  L++ L +   +++  +L++ M + +  P+V T +
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 363

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +L+  L  + ++  A   + E   K     C P+ + Y  +   L   G++ +A +L   
Sbjct: 364 TLLRALCHHKQLDGAHRLYAEMIAKG----CPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 499 MRSDNLRP 506
           M+     P
Sbjct: 420 MKLTKRNP 427



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 217/425 (51%), Gaps = 5/425 (1%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M L  ++    T+  + D     G + +   ++  M++ G       Y ILI  LC    
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             EA  +  +MR          Y+ +++  CK+  V  A E   +M  +   P+ +T+G 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGP 119

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++ LCK   +  A      MA  G+ P+ F+YN ++ G C+   + EA  L  +M K  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I+P+V TYN LI GLC   ++E A  L ++M  +G +   V+YN+LIDG+CK+ D+  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V  +M      PNVVT+++LIDG  K+G + AA  +   MV K + P+V  ++ LIDG 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   + E  +L ++M+   I P+V T + L++ L +  ++ +A   F     +     C
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR----C 355

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P  V Y  +++ALC+  Q+  A +L+++M +    PD  TY T+  GL RA ++ +   
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415

Query: 530 LLADM 534
           L+  M
Sbjct: 416 LMEKM 420



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 194/386 (50%), Gaps = 4/386 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
              S +  LI    ++G+ +EA   L   R         A + ++N L K  + +   E 
Sbjct: 43  LRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL 102

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E+M       D +TYG +++  C    +  AL   +EM  +GI+P   IY  ++ GLC 
Sbjct: 103 IEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ 161

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EA  +F  M +  + PN+ TYN L++G CK   +  A E + EM      P  V+
Sbjct: 162 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 221

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+DG CK  +L AA + F  M +    PN+  Y  LIDG  K+G +  A  +   M 
Sbjct: 222 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 281

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           K  ++P+V TY+ LI G C V +++ A  LL++M  +GI   VVTYN L++  C+   +E
Sbjct: 282 KKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 341

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   M ++   P VVT+++L+   C    +D A  LY EM+ K   PD + +  L 
Sbjct: 342 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLA 401

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITP 432
            GL++ G + E   L ++M   K  P
Sbjct: 402 WGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 210/429 (48%), Gaps = 5/429 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M  + + P    +  +  G     ++ + + +++ M E G       Y  L+   CKV +
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            + A +  H M     +   + +  +++ LCK+  +  A      MA++   P+   Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGP 119

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +++  CK   + +A++   EM    I PD F YN ++ GLC   ++E A  L +KM K+ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I  NVVTYN+LI+G CK   +E A  +  +M  KG  P  V++++LIDG CK  ++ AA 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +MV  + VP+VV +T LIDGLSK G ++    +   M++  +TP+V T S LI G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K  R+  A     +    T G   +P  V Y  ++ +LC   ++  A KLF  M     
Sbjct: 300 CKVRRVDEAHKLLEQMV--TQG--IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            P   TY T+LR L   K++     L A+MI  G  PDA+    +  G    G +  A  
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415

Query: 565 CSEFLKESR 573
             E +K ++
Sbjct: 416 LMEKMKLTK 424



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 168/371 (45%), Gaps = 5/371 (1%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P   TF  + DG  K G L      +  M + G       Y  LI   CK GN  EA  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M           Y+ +I  LC + ++E A  L++KM +     + +TY  +++  CK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCK 126

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              ++ AL+   +M  +G++P+   ++ ++ G C+   ++ A  L+ +MV + + P+VV 
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  LI+GL K   ++    L+KEM      P+  + ++LI G  K   +  A + F    
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF---- 242

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           DK     C PN V Y  +I  L   G++  A+++   M    + P+  TY+ ++ G  + 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
           +R+ +   LL  M+  GI P  V   +++        L+ AF+    + + R   +    
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 582 HTTRSFLGHLK 592
           +T    L H K
Sbjct: 363 NTLLRALCHHK 373


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 226/441 (51%), Gaps = 4/441 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I     L + L++   + +V    ++M + G+  DV++  +LI+C C    V    +
Sbjct: 88  LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  ++I  G+EP V+ ++ LI+G C E K+  A  +F  M   G  PN+++Y+ ++ G C
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +V      ++    M     +P+VV +  ++D LCK   +  A + F  M   G+ P + 
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LI G    G   EA  L +EM+   I PD+  +++LI  +C  G++  A  +L+ M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  +V TYN+L++GYC   ++ +A  V   M  KG  P+V +FS L++G CKA  I
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A  L+ EM  + L+PD V +  LI GL +     E   L+K+M      P++ T S L
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           +  L K G +  A+  F       +     P+ V Y  +I  +C  G+   A +LF+++ 
Sbjct: 448 LDCLSKQGYLDQAMGLF----RAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503

Query: 501 SDNLRPDNCTYTTMLRGLLRA 521
              L+P+N   T  + G+ + 
Sbjct: 504 VKGLQPNNWVCTPTIDGVCKG 524



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 216/406 (53%), Gaps = 6/406 (1%)

Query: 33  HVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQAC 87
           HV Y  F+ L  +      P+V  FSTLI  F   G I  A+ ++  +      P + + 
Sbjct: 141 HVDYG-FSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSY 199

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + ++ GL + GK   V +  E M + G   DVV Y  ++D  C    V +A+++F +M  
Sbjct: 200 SIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKG 259

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            GI PTVV YT LIHGL N  +  EA  +   M+   ++P+L  ++ L+D  CK  +V+ 
Sbjct: 260 TGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSE 319

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A      M    ++P+V T+  LM+G C   E+  A   F  M   G  P++F ++ L++
Sbjct: 320 ARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVN 379

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CKA  + EA  L  EM    + PD  +YN LI GLC   +   AE L + M+  G   
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+VTY+ L+D   K+G +++A+ +   M   G++P++VT++ +IDG CK G    A  L+
Sbjct: 440 NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF 499

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            E+ +K L P+  V T  IDG+ K G + E  + +++M +   +P+
Sbjct: 500 AELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 213/422 (50%), Gaps = 11/422 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            + LI  F  + H++    V  KI  L   P +   + L+NG   +GK     E ++ MV
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +V +Y ++I   C  G   + + L + M   G EP VVIY  ++  LC +  + 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F  M+  G++P + TY +L+ G   +     A    +EM   N+ P++V F VL+
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D +CK GE+  A      M + GV P++  YN L++G+C    + EA  +   M      
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDVF+++IL+ G C   +++ A+ L  +M   G++ + V+YN+LI G C+     +A  +
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G  PN+VT+S L+D   K G +D AMGL+  M    L PD+V +  +IDG+ K
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK 488

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYC 469
            G  K+   L+ E+    + P+ +  +  I G+ K G +  A   F  +EK D      C
Sbjct: 489 YGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD------C 542

Query: 470 SP 471
           SP
Sbjct: 543 SP 544



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 203/429 (47%), Gaps = 4/429 (0%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           ++  AL+ F+ M++    P++V +  L   L          S+ + M   G+  ++ +  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L++ +C++  V+       +++   L+PNV+TF  L++G C  G++  A   F  M   
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  PN+  Y+ +I G C+ G   E + L   M+     PDV  YN ++  LC    +  A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  KM   GIL  VVTY SLI G    G  ++A  + ++M    + P++V FS LID 
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +  A  +   M    + PDV  +  L++G      + E  ++++ M+     P 
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           VF+ S L++G  K  RI  A   F E T +       P+ V Y  +I  LC   + L+A 
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRG----LIPDTVSYNTLISGLCQARRPLEAE 426

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF DM S+   P+  TY+ +L  L +   +   M L   M   G+ PD V   +M+ G 
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486

Query: 554 QENGDLKSA 562
            + G  K A
Sbjct: 487 CKYGKFKDA 495



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 4/220 (1%)

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++  ALS  + M      P++V F  L     +  +    + L  +M +  +  DV+  T
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI+   +  ++     +  ++++  + P+V T S+LI+G    G+I  A+  F     +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              GY  PN   Y+ II+ LC  G+  +  KL   M+     PD   Y T++  L + + 
Sbjct: 191 ---GY-KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + + + +   M   GI+P  V    ++ G +  G  K AF
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAF 286


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 242/502 (48%), Gaps = 13/502 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV-TYGVLIDCCCGQGD 134
           R+  V P+ ++ N +L+ L +          Y  MV    V     T+GV     C  G 
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
             +AL L   M   G  P  V+Y  +IH LC++  + EA ++   M   G   ++ T++ 
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++ G C +  V  A      M+     P V+T+G L+ GLC+V +   A       A  G
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA------RAMLG 304

Query: 255 VFP--NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             P  N+ ++N +I G    G L EA  L   M      PD  TY+IL+ GLC +G++  
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISS 364

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  LL++M K+G   NVVTY  ++  +CK G  +   ++  +M+ KG+  N   ++ +I 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK G +D AMGL  EM  +   PD+  +  +I  L  +  M+E   +++ +LE  +  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T +++IH L ++GR  +A+    E         CS + V Y  +I+A+C DG + ++
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHG----CSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  +M    ++P+N +Y  ++  L + +R+ D + L   M+  G+ PD V    ++ G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
             + G + +A    E L    +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENV 622



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 236/504 (46%), Gaps = 25/504 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F     A   +G   EAL + R +     +P       +++ L  +G          EM
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G  ADV T+  ++   CG G V +A  L D M+ KG  P V+ Y  L+ GLC   + 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 171 VEAESMFRSMRECGVVP--NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            EA +M       G VP  N+  +N ++ G      +  A E Y  M     QP+  T+ 
Sbjct: 297 DEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 350

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +LM GLCK+G + +A      M K G  PN+  Y  ++   CK G   +  +L  EM   
Sbjct: 351 ILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            ++ +   YN +I  LC  G+++ A GL+Q+M  +G   ++ +YN++I   C    ME+A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   + E+GV  N +T++++I    + G    A+ L  EM++     DVV +  LI  
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           + KDGN+  +L L +EM E  I P+  + + LI  L K  R+ +AL    +  ++     
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG---- 586

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ V Y  +I  LC  G +  A  L   + ++N+ PD  TY  ++    + + + D  
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646

Query: 529 MLL----------ADMIKMGIVPD 542
           MLL           D   M I+PD
Sbjct: 647 MLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 230/485 (47%), Gaps = 12/485 (2%)

Query: 70  EALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +AL +YR++     V P           L + G+ +        M   G V D V Y  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTV 216

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C QG V +A  L +EM+  G    V  +  ++ G+C   ++ EA  +   M   G 
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +P + TY  L+ G C+V   + A      ML    + NVV F  ++ G    G+L  A  
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATE 332

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            +  M   G  P+   Y+ L+ G CK G +  A+ L  EMEK   +P+V TY I++   C
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFC 392

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G  +    LL++M  +G+  N   YN +I   CK+G M++A+ +  +M  +G  P++ 
Sbjct: 393 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           +++++I   C    ++ A  ++  ++ + +V + + +  +I  L +DG  ++ +RL KEM
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +    +  V + + LI  + K+G +  +L    E  +K       PN+V Y  +I  LC 
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG----IKPNNVSYNILISELCK 568

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           + ++  A +L   M +  L PD  TY T++ GL +   M   + LL  +    + PD + 
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 546 NQVMV 550
             +++
Sbjct: 629 YNILI 633



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 4/366 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDS 102
            +P+ N  +F+T+I      G + EA  +Y  + +    P     + L++GL K G+  S
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISS 364

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                 EM   G   +VVTY +++   C  G       L +EM  KG+      Y  +I+
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC + +M EA  + + MR  G  P++ +YN ++   C    +  A   +  +L   +  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N +T+  ++  L + G  + A      M   G   ++  YN LI   CK GN+  ++ L 
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM +  I P+  +YNILI  LC   ++  A  L ++M  +G+  ++VTYN+LI+G CK 
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI-DAAMGLYTEMVIKSLVPDVVV 401
           G M  AL++  ++  + V P+++T++ LI   CK   + DAAM L   M     V D  +
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRI 664

Query: 402 FTALID 407
              L D
Sbjct: 665 MQILPD 670


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 240/465 (51%), Gaps = 17/465 (3%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGL 94
           +V +    +E     P +F  S LI  +  +G +  A  V+ KI           L  GL
Sbjct: 85  TVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKI-----------LKMGL 133

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
              GK +    F++ ++  G   + VTYG+LI+  C  G    AL +  ++  K +   V
Sbjct: 134 CLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNV 193

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V+Y+ +I GLC +  + +A  ++  M    + P + T+++L+ G+C V     A   ++E
Sbjct: 194 VMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNE 253

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+  N+ P+  TF +L+D LCK G+++ A N    M K GV P +  YN L+DG+C    
Sbjct: 254 MVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +A  + S + +  ++P+  +YNI+I G C +  ++ A  L  +M   GI  + VTYNS
Sbjct: 314 VGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG CK G +  A  +  +M    +  ++VT++SLID  CK  ++D A+ L  ++    
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P++  +  LIDGL K G +K    +++++L      + +T + +I+GL K G    A 
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA- 492

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
              L K +  D G   P+ V Y  IIQAL +  +  KA KL  +M
Sbjct: 493 EVLLSKME--DNGII-PDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 172/557 (30%), Positives = 270/557 (48%), Gaps = 44/557 (7%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIK-KGKFDSV 103
           L IP  N  V    +++F+ M          R+I   P+I   N +L  LIK K  + +V
Sbjct: 39  LSIP--NGFVVDNAVLSFNRM----------RQIRQTPSIVEFNKILTYLIKTKNHYPTV 86

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCC--GQ-------------------GDVMKALNLF 142
                +M   G+  D+ T  +LI+C C  GQ                   G V +AL   
Sbjct: 87  LSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFH 146

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           D ++  G     V Y ILI+GLC   +   A  + R +    V  N+  Y+ ++DG CK 
Sbjct: 147 DHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKD 206

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V  A   Y EM+   + P VVTF  L+ G C VG+ + A   F  M    + P+ + +
Sbjct: 207 KLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTF 266

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N L+D  CK G + EA ++ + M K  + P V TYN L+ G C V ++  A+ +L  + +
Sbjct: 267 NILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR 326

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
             +  N  +YN +I+G+CK   +++AL +  +M  +G+ P+ VT++SLIDG CKAG I  
Sbjct: 327 MRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPY 386

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L  EM    +  D+V + +LID   K+ ++ + + L K++ E  I P++ T + LI 
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL K G++ NA + F    D    GY + N   Y  +I  LC +G   +A  L S M  +
Sbjct: 447 GLCKGGQLKNAQDVF---QDLLIKGY-NVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDN 502

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA------VINQVMVRGYQEN 556
            + PD  TY T+++ L           LL +M+  G+V  A      ++ + +  G    
Sbjct: 503 GIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGMNLI 562

Query: 557 GDLKSAFRCSEFLKESR 573
             L SA  C  F +E++
Sbjct: 563 SLLFSALECFSFGEETK 579



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/439 (32%), Positives = 211/439 (48%), Gaps = 15/439 (3%)

Query: 8   AKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGH 67
           AK+ K   CL   V E LL      HV    F+          N   +  LI    +MG 
Sbjct: 126 AKILKMGLCLNGKVNEALLFH---DHVLALGFH---------LNHVTYGILINGLCKMGQ 173

Query: 68  IEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
              AL V R+IE   V   +   + +++GL K       +  Y EM++  +   VVT+  
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI   C  G    A  LF+EM+ K I P    + IL+  LC E K+ EA+++   M + G
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           V P + TYN LMDGYC V +V +A      +    + PN  ++ ++++G CK+  +  A 
Sbjct: 294 VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEAL 353

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M   G+ P+   YN LIDG CKAG +  A  L  EM    I  D+ TYN LI   
Sbjct: 354 CLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVF 413

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C    ++ A  L++K+ + GI  N+ TYN LIDG CK G ++ A  V   +  KG   N 
Sbjct: 414 CKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNA 473

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
            T++ +I+G CK G  D A  L ++M    ++PD V +  +I  L      ++  +L +E
Sbjct: 474 WTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLRE 533

Query: 425 MLEAKITPSVFTVSSLIHG 443
           M+   +    F +   + G
Sbjct: 534 MVIKGVVVYAFEIRRTLVG 552



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 188/402 (46%), Gaps = 25/402 (6%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVAD-VNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           F  MR+    P++  +N ++    K  +     L    +M    ++P++ T  +L++  C
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
            +G++  A + F  + K G+              C  G + EA+     +       +  
Sbjct: 114 HLGQMTFAFSVFAKILKMGL--------------CLNGKVNEALLFHDHVLALGFHLNHV 159

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY ILI GLC +GQ   A  +L+++  + +  NVV Y+++IDG CK+  +  A  + S+M
Sbjct: 160 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEM 219

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             K + P VVTFSSLI G C  G    A  L+ EMV+K++ PD   F  L+D L K+G +
Sbjct: 220 IVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKI 279

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHG---LFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           KE   +   M++  + P+V T ++L+ G   + + G+  + L+              +PN
Sbjct: 280 KEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR-------VAPN 332

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  +I   C    + +A  LF +M    + P   TY +++ GL +A R+     L+ 
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVD 392

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +M    I  D V    ++  + +N  +  A    + +KE  I
Sbjct: 393 EMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 258/548 (47%), Gaps = 44/548 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE-VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           V++T+I  F E+   E+AL  Y + + V   +Q CN LL  L+++ +       +++M  
Sbjct: 143 VYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKS 202

Query: 113 CGLVADVVTYGVLIDCCCGQGD---VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            G   +V +Y VL+      GD   + +A  L  EM  KG++P    Y   ++GL    +
Sbjct: 203 SGPSPNVYSYSVLMSAYT-HGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A +  + + + G   N Y +NA++ G+C+   V  A+E +  M    L P+  ++ +
Sbjct: 262 VASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSI 321

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK-- 287
           L+DGLCK G++    +  V MA+ G+ P +  Y+ L+ G C+AG +  A  L   +E+  
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 288 ---------------------------------FEISPDVFTYNILIKGLCGVGQLEGAE 314
                                                PD + Y  LI   C    L  A 
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDAL 441

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           G+ + M   G+  NVVT   L+DG+ KE  +++A     ++ + G+ PN+  +  +I+G 
Sbjct: 442 GVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGL 501

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK    D   G++ +M+ +  VPD VV++ +ID   K   + E  RL+ +ML+    P+V
Sbjct: 502 CKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNV 561

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT +SLI+GL  + R+   +  F  K    +G   +P+ +LY ++I   C    +  A +
Sbjct: 562 FTYTSLINGLCHDDRLPEVVTLF--KHMIWEG--LTPDRILYTSLIVCYCKRSNMKAALE 617

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +F  M    L  D   YT ++ G  +   M     L+ +M   G+ P  V    ++ GY 
Sbjct: 618 IFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYF 677

Query: 555 ENGDLKSA 562
           + GD + A
Sbjct: 678 KIGDERKA 685



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 243/525 (46%), Gaps = 46/525 (8%)

Query: 39  FNALNSLEIP--KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQAC-NALLN 92
           F  L+ +E+   K N + + T +   S    +  A W + ++      P    C NA++ 
Sbjct: 231 FELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASA-WNFLQMLCQRGNPCNTYCFNAVIQ 289

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           G  ++G+     E ++ M   GLV D  +Y +L+D  C QGDV+   +L  EM   GI P
Sbjct: 290 GFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAP 349

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           T+V Y+ L+HGLC   K+  A  +FR + E G   +   Y+ +++G C+  ++    + +
Sbjct: 350 TLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLW 409

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           ++M+HHN  P+   +  L+   C+   L  A   F  M   GV PN+     L+DG  K 
Sbjct: 410 NDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKE 469

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + EA     ++ +F I P++  Y ++I GLC V + +   G+   M K G + + V Y
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           + +ID + K   + +A  +  +M ++G +PNV T++SLI+G C    +   + L+  M+ 
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           + L PD +++T+LI    K  NMK  L +++ M +  ++   F  + LI G         
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGG--------- 640

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
                  K    DG  C                         L  +M +  L P   TYT
Sbjct: 641 -----FSKVLAMDGAQC-------------------------LMEEMTNKGLTPSVVTYT 670

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            ++ G  +        M    M++ GI PDA ++ ++  G   +G
Sbjct: 671 NLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCILGFGNDADG 715



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 232/460 (50%), Gaps = 37/460 (8%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  + E    G+E  + +   L+  L   N+++ A S+F  M+  G  PN+Y+Y+ LM 
Sbjct: 160 ALLTYTEAKKVGVE--LQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMS 217

Query: 198 GYCKVADV--NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
            Y     +    A E   EM    ++PN  T+G  + GL +  ++ +A NF   + + G 
Sbjct: 218 AYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGN 277

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             N + +N +I G C+ G + EA+ +   M+K  + PD  +Y+IL+ GLC  G +     
Sbjct: 278 PCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYD 337

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL +M + GI   +V+Y+SL+ G C+ G +E A  +  ++ E+G + + + +S +++G C
Sbjct: 338 LLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCC 397

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           +  NI+    L+ +MV  + VPD   +T+LI    +  N+ + L +++ ML++ ++P+V 
Sbjct: 398 QHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVV 457

Query: 436 TVSSLIHGLFKNGRISNALNFF---------------------LEKTDKTDG-------- 466
           T + L+ G  K   I  A  F                      L K +K+D         
Sbjct: 458 TCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADM 517

Query: 467 ---GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              GY  P+ V+Y+ II +     ++ +A +LF  M  +  +P+  TYT+++ GL    R
Sbjct: 518 IKRGYV-PDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDR 576

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + +V+ L   MI  G+ PD ++   ++  Y +  ++K+A 
Sbjct: 577 LPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAAL 616



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 8/280 (2%)

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD---MEKALSVCSQ 354
           N L+K L    Q+  A  L   M   G   NV +Y+ L+  Y   GD   + +A  + S+
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAY-THGDRLYLAEAFELLSE 236

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  KGV+PN  T+ + + G  +   + +A      +  +    +   F A+I G  ++G 
Sbjct: 237 MEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQ 296

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           ++E + ++  M +  + P   + S L+ GL K G +    +  +E          +P  V
Sbjct: 297 VQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG----IAPTLV 352

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y++++  LC  G++  A +LF  +     + D+  Y+ +L G  +   +  V  L  DM
Sbjct: 353 SYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDM 412

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +    VPDA     ++  +  + +L  A    E + +S +
Sbjct: 413 VHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGV 452



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 8/250 (3%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G +  +  Y ++I  + +    E AL   ++  + GVE  +  F  L+    +   I  A
Sbjct: 136 GSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNF--LLKCLVERNQIIYA 193

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM--KETLRLYKEMLEAKITPSVFTVSSLI 441
             L+ +M      P+V  ++ L+   +    +   E   L  EM    + P+  T  + +
Sbjct: 194 RSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYL 253

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +GL +  ++++A NF      +  G  C  N   + A+IQ  C +GQ+ +A ++F  M+ 
Sbjct: 254 YGLSRTRQVASAWNFLQMLCQR--GNPC--NTYCFNAVIQGFCREGQVQEAIEVFDAMKK 309

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             L PD  +Y+ ++ GL +   +L    LL +M + GI P  V    ++ G    G ++ 
Sbjct: 310 GGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVEL 369

Query: 562 AFRCSEFLKE 571
           AF     L+E
Sbjct: 370 AFELFRRLEE 379


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 252/494 (51%), Gaps = 22/494 (4%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           A++  L K GK D+ +E   E+   GL   VVTY VL+D  C  G V +A  L   M   
Sbjct: 16  AMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQG 75

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+ P+VV + ILI+GL    +  E   + + M + GV PN   YN L+  +C+    ++A
Sbjct: 76  GMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQA 135

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L  + EM+   ++P  VT+ ++   LCK GE+  A      M   G+  +  ++N ++  
Sbjct: 136 LRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAW 195

Query: 269 HCKAGNLFEA-MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL----------- 316
             +     E+ +S+ +EM    + P+       ++ LC  G+ + A G+           
Sbjct: 196 LLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYM 255

Query: 317 ------LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
                 +Q M  +GI  + +TYN +I G CK+  ME+A+ +   MT +G +P++ TF++L
Sbjct: 256 KEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 315

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +   C  G ++    L  +M  + L PD+V +  +IDG  K  ++++      E+++  +
Sbjct: 316 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 375

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+VF  ++LI G  +NG IS A++    +T K++G    P +V Y +++  +C+ G + 
Sbjct: 376 KPNVFIYNALIGGYGRNGDISGAIDAV--ETMKSNG--IQPTNVTYGSLMYWMCHAGLVE 431

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A  +FS  R +N+      YT M++G  +  +M++ +    +M   GI P+ +    ++
Sbjct: 432 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 491

Query: 551 RGYQENGDLKSAFR 564
             Y ++G+ + A +
Sbjct: 492 YAYSKSGNSEEASK 505



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 241/500 (48%), Gaps = 27/500 (5%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           F  L  L      P+V  ++ L+ A  + G +EEA  +  ++E   + P++     L+NG
Sbjct: 31  FEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILING 90

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L +  +F  V    +EM   G+  + V Y  LI   C +G   +AL LFDEM+ K ++PT
Sbjct: 91  LARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPT 150

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC-KVADVNRALEFY 212
            V Y ++   LC E +M  AE +   M   G+  +   +N ++     +   +   +   
Sbjct: 151 AVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSIT 210

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGE-----------------LRAAGNFFVHMAKFGV 255
           +EM+   ++PN       M  LCK G+                 ++ A      M   G+
Sbjct: 211 NEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGI 270

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +   YN +I G CK   + EA+ L  +M +    PD+FT+N L+   C +G++E    
Sbjct: 271 ELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFH 330

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL +M  EG+  ++V+Y ++IDG+CK  D+ KA    +++ ++G++PNV  +++LI G  
Sbjct: 331 LLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYG 390

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           + G+I  A+     M    + P  V + +L+  +   G ++E   ++ +  E  +   V 
Sbjct: 391 RNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVI 450

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             + +I G  K G++  A+ +F E   +      SPN + Y  ++ A    G   +ASKL
Sbjct: 451 GYTIMIQGYCKLGKMVEAVAYFEEMRSRG----ISPNKLTYTTLMYAYSKSGNSEEASKL 506

Query: 496 FSDMRSDNLRPDNCTYTTML 515
           F +M    + PDN TY T++
Sbjct: 507 FDEMVGSGVIPDNITYGTLI 526



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 199/408 (48%), Gaps = 25/408 (6%)

Query: 29  RKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVYRKIEVLPAIQA 86
           RK H  C       + + + K  P+  +  +IA    + G +E A  +   +  +     
Sbjct: 128 RKGH--CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH 185

Query: 87  C---NALLNGLIKKGK-FDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCG---------- 131
           C   N ++  L+++ +  +SV     EMV  G+   D +    + + C G          
Sbjct: 186 CGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIW 245

Query: 132 -----QGDVMK-ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
                +G  MK A  +   M++KGIE   + Y I+I G C ++KM EA  +   M   G 
Sbjct: 246 FKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGF 305

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            P+L+T+N L+  YC +  +        +M    LQP++V++G ++DG CK  ++R A  
Sbjct: 306 KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 365

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           +   +   G+ PN+F+YN LI G+ + G++  A+     M+   I P   TY  L+  +C
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A+ +  +  +  +   V+ Y  +I GYCK G M +A++   +M  +G+ PN +
Sbjct: 426 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKL 485

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           T+++L+    K+GN + A  L+ EMV   ++PD + +  LI   S+ G
Sbjct: 486 TYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 23/414 (5%)

Query: 180 MREC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           MRE   V  N Y+Y A++   CK   V+   E   E+    LQP VVT+ VLMD LCK G
Sbjct: 1   MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A      M + G+ P++  +  LI+G  +     E   +  EME+  +SP+   YN
Sbjct: 61  RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 120

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI   C  G    A  L  +M  + +    VTYN +    CKEG+ME+A  +   M   
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180

Query: 359 GVEPNVVTFSSLIDGQC-KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN--- 414
           G+  +   F++++     +   +++ + +  EMV + + P+  + TA +  L K G    
Sbjct: 181 GMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQE 240

Query: 415 --------------MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
                         MKE  ++ + ML   I     T + +I G  K+ ++  A+      
Sbjct: 241 AVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH--- 297

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D T  G+  P+   +  ++ A C  G++ +   L   M+++ L+PD  +Y T++ G  +
Sbjct: 298 GDMTRRGF-KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 356

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           AK +      L +++  G+ P+  I   ++ GY  NGD+  A    E +K + I
Sbjct: 357 AKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 410


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 247/498 (49%), Gaps = 8/498 (1%)

Query: 70  EALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
           EA+ VYR++ +    P++Q  ++L+ GL K+   DSV    +EM   GL  +V T+ + I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 G + +A  +   M D+G  P VV YT+LI  LC   K+  A+ +F  M+     
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  TY  L+D +    D++   +F+ EM      P+VVTF +L+D LCK G    A + 
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M   G+ PN+  YN LI G  +   L +A+ L   ME   + P  +TY + I     
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G    A    +KM  +GI  N+V  N+ +    K G   +A  +   + + G+ P+ VT
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ ++    K G ID A+ L +EM+     PDV+V  +LI+ L K   + E  +++  M 
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E K+ P+V T ++L+ GL KNG+I  A+  F     K     C PN + +  +   LC +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG----CPPNTITFNTLFDCLCKN 621

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            ++  A K+   M      PD  TY T++ GL++  ++ + M     M K+ + PD V  
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTL 680

Query: 547 QVMVRGYQENGDLKSAFR 564
             ++ G  +   ++ A++
Sbjct: 681 CTLLPGVVKASLIEDAYK 698



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 244/521 (46%), Gaps = 9/521 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFD 101
            I K + + + T+  + S  G +++A +  RK+     VL A  + N L++ L+K     
Sbjct: 147 RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY-SYNGLIHLLLKSRFCT 205

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              E Y  M+L G    + TY  L+     + D+   + L  EM   G++P V  +TI I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             L    K+ EA  + + M + G  P++ TY  L+D  C    ++ A E + +M     +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+ VT+  L+D      +L +   F+  M K G  P++  +  L+D  CKAGN  EA   
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              M    I P++ TYN LI GL  V +L+ A  L   M   G+     TY   ID Y K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            GD   AL    +M  KG+ PN+V  ++ +    KAG    A  ++  +    LVPD V 
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  ++   SK G + E ++L  EM+E    P V  V+SLI+ L+K  R+  A   F+   
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           +        P  V Y  ++  L  +G+I +A +LF  M      P+  T+ T+   L + 
Sbjct: 566 EMK----LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +   + +L  M+ MG VPD      ++ G  +NG +K A
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 168/647 (25%), Positives = 285/647 (44%), Gaps = 93/647 (14%)

Query: 19  KDVTENLLKSR-KPHHVCY--------------SVFNALNSLEIPKFNPSV--FSTLIIA 61
           K+V E +   R KP  V Y              SV    + +E     P V  F+ L+ A
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372

Query: 62  FSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
             + G+  EA   L V R   +LP +   N L+ GL++  + D   E +  M   G+   
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
             TY V ID     GD + AL  F++M  KGI P +V     ++ L    +  EA+ +F 
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            +++ G+VP+  TYN +M  Y KV +++ A++   EM+ +  +P+V+    L++ L K  
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A   F+ M +  + P +  YN L+ G  K G + EA+ L   M +    P+  T+N
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L   LC   ++  A  +L KM   G + +V TYN++I G  K G +++A+    QM +K
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KK 671

Query: 359 GVEPNVVTFSSLIDGQCKAGNI---------------DAAMGLYTEMVIKSLVPDVVVFT 403
            V P+ VT  +L+ G  KA  I               D    L+ E +I S++ +  +  
Sbjct: 672 LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDN 731

Query: 404 A-------LIDGLSKDG---------------NMKETLRLYKEML-EAKITPSVFTVSSL 440
           A       + +G+ +DG               N+     L+++   +  + P + T + L
Sbjct: 732 AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791

Query: 441 IHGLFKNGRISNALNFFLE---------------------KTDKTDGGY----------C 469
           I GL +   I  A + FL+                     K+ K D  +          C
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVM 528
             N + +  +I  L   G +  A  L+ D+ SD +  P  CTY  ++ GL ++ R+ +  
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
            L   M+  G  P+  I  +++ G+ + G+  +A  C+ F +  + G
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA--CALFKRMVKEG 956



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 266/615 (43%), Gaps = 87/615 (14%)

Query: 38   VFNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            +F  + SL +    P+ ++ ++    + + G    AL  + K++   + P I ACNA L 
Sbjct: 420  LFGNMESLGV---KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476

Query: 93   GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
             L K G+     + +  +   GLV D VTY +++ C    G++ +A+ L  EM++ G EP
Sbjct: 477  SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536

Query: 153  TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V++   LI+ L   +++ EA  MF  M+E  + P + TYN L+ G  K   +  A+E +
Sbjct: 537  DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 213  HEMLHHNLQPNVVTFGVLMDGLCKV----------------------------------- 237
              M+     PN +TF  L D LCK                                    
Sbjct: 597  EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656

Query: 238  GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA---------------------GNLF 276
            G+++ A  FF  M K  V+P+      L+ G  KA                      NLF
Sbjct: 657  GQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715

Query: 277  EAMSLCSEMEKFEISPDV-FTYNILIKGLCGVG---------------QLEGAEGLLQKM 320
                + S + +  I   V F+  ++  G+C  G                + GA  L +K 
Sbjct: 716  WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775

Query: 321  YKE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
             K+ G+   + TYN LI G  +   +E A  V  Q+   G  P+V T++ L+D   K+G 
Sbjct: 776  TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835

Query: 380  IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVS 438
            ID    LY EM       + +    +I GL K GN+ + L LY +++  +  +P+  T  
Sbjct: 836  IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895

Query: 439  SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
             LI GL K+GR+  A   F    D      C PN  +Y  +I      G+   A  LF  
Sbjct: 896  PLIDGLSKSGRLYEAKQLFEGMLDYG----CRPNCAIYNILINGFGKAGEADAACALFKR 951

Query: 499  MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            M  + +RPD  TY+ ++  L    R+ + +    ++ + G+ PD V   +++ G  ++  
Sbjct: 952  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011

Query: 559  LKSAFRCSEFLKESR 573
            L+ A      +K SR
Sbjct: 1012 LEEALVLFNEMKTSR 1026



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 260/588 (44%), Gaps = 83/588 (14%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
             ++ ++  +S++G I+EA+ +  ++      P +   N+L+N L K  + D  W+ +  M
Sbjct: 505  TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                L   VVTY  L+      G + +A+ LF+ M+ KG  P  + +  L   LC  +++
Sbjct: 565  KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              A  M   M + G VP+++TYN ++ G  K   V  A+ F+H+M    + P+ VT   L
Sbjct: 625  TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTL 683

Query: 231  MDGLCKVGELRAA---------------GNFFVH------MAKFGV-----FPNIFVYN- 263
            + G+ K   +  A                N F        +A+ G+     F    V N 
Sbjct: 684  LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743

Query: 264  ----------CLIDGHCKAGNLFEAMSLCSEMEK-FEISPDVFTYNILIKGLCGVGQLEG 312
                       +I   CK  N+  A +L  +  K   + P + TYN+LI GL     +E 
Sbjct: 744  ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803

Query: 313  AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            A+ +  ++   G + +V TYN L+D Y K G +++   +  +M+    E N +T + +I 
Sbjct: 804  AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863

Query: 373  GQCKAGNIDAAMGLYTE-MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G  KAGN+D A+ LY + M  +   P    +  LIDGLSK G + E  +L++ ML+    
Sbjct: 864  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923

Query: 432  PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            P+    + LI+G  K G    A   F     +       P+   Y+ ++  LC  G++ +
Sbjct: 924  PNCAIYNILINGFGKAGEADAACALFKRMVKEG----VRPDLKTYSVLVDCLCMVGRVDE 979

Query: 492  ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM-IKMGIVPD-------- 542
                F +++   L PD   Y  ++ GL ++ R+ + ++L  +M    GI PD        
Sbjct: 980  GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039

Query: 543  -------------AVINQV--------------MVRGYQENGDLKSAF 563
                          + N++              ++RGY  +G  + A+
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 237/509 (46%), Gaps = 5/509 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           P + +   +  GL      DS + +++ +     LV    T   +++     G + +   
Sbjct: 80  PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +FD M  + I+     Y  +   L  +  + +A    R MRE G V N Y+YN L+    
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K      A+E Y  M+    +P++ T+  LM GL K  ++ +       M   G+ PN++
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +   I    +AG + EA  +   M+     PDV TY +LI  LC   +L+ A+ + +KM
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
                  + VTY +L+D +    D++      S+M + G  P+VVTF+ L+D  CKAGN 
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A      M  + ++P++  +  LI GL +   + + L L+  M    + P+ +T    
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I    K+G   +AL  F EK  KT G   +PN V   A + +L   G+  +A ++F  ++
Sbjct: 440 IDYYGKSGDSVSALETF-EKM-KTKG--IAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L PD+ TY  M++   +   + + + LL++M++ G  PD ++   ++    +   + 
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555

Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLG 589
            A++    +KE ++  +    +T  + LG
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 7/328 (2%)

Query: 48   PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
            PK     ++ LI    E   IE A  V+ +++    +P +   N LL+   K GK D ++
Sbjct: 783  PKL--PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840

Query: 105  EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF-DEMIDKGIEPTVVIYTILIHG 163
            E Y+EM      A+ +T+ ++I      G+V  AL+L+ D M D+   PT   Y  LI G
Sbjct: 841  ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900

Query: 164  LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            L    ++ EA+ +F  M + G  PN   YN L++G+ K  + + A   +  M+   ++P+
Sbjct: 901  LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960

Query: 224  VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            + T+ VL+D LC VG +    ++F  + + G+ P++  YN +I+G  K+  L EA+ L +
Sbjct: 961  LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020

Query: 284  EMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM+    I+PD++TYN LI  L   G +E A  +  ++ + G+  NV T+N+LI GY   
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            G  E A +V   M   G  PN  T+  L
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 242/567 (42%), Gaps = 81/567 (14%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI    +   ++EA  ++   +++++ P +   N LL GL K GK     E +E M
Sbjct: 540  VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599

Query: 111  VLCGLVADVVTYGVLIDCCCGQ-----------------------------------GDV 135
            V  G   + +T+  L DC C                                     G V
Sbjct: 600  VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659

Query: 136  MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS-MRECGVVPNLYTYNA 194
             +A+  F +M  K + P  V    L+ G+   + + +A  +  + +  C   P    +  
Sbjct: 660  KEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWED 718

Query: 195  LMDGYCKVADVNRALEFYHEML---------------------HHNL------------- 220
            L+      A ++ A+ F   ++                     H+N+             
Sbjct: 719  LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778

Query: 221  ---QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
               QP + T+ +L+ GL +   +  A + F+ +   G  P++  YN L+D + K+G + E
Sbjct: 779  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838

Query: 278  AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILANVVTYNSLI 336
               L  EM   E   +  T+NI+I GL   G ++ A  L    M          TY  LI
Sbjct: 839  LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898

Query: 337  DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            DG  K G + +A  +   M + G  PN   ++ LI+G  KAG  DAA  L+  MV + + 
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 397  PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            PD+  ++ L+D L   G + E L  +KE+ E+ + P V   + +I+GL K+ R+  AL  
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018

Query: 457  FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            F E   KT  G  +P+   Y ++I  L   G + +A K++++++   L P+  T+  ++R
Sbjct: 1019 FNEM--KTSRG-ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 517  GLLRAKRMLDVMMLLADMIKMGIVPDA 543
            G   + +      +   M+  G  P+ 
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNT 1102



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 220/472 (46%), Gaps = 13/472 (2%)

Query: 52   PSVFS--TLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
            P VF+  T+I    + G ++EA+  + +++  V P       LL G++K    +  ++  
Sbjct: 641  PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700

Query: 108  EEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLC 165
               +  C      + +  LI     +  +  A++  + ++  GI      I   +I   C
Sbjct: 701  TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760

Query: 166  NENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
              N +  A ++F    ++ GV P L TYN L+ G  +   +  A + + ++      P+V
Sbjct: 761  KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820

Query: 225  VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             T+  L+D   K G++      +  M+      N   +N +I G  KAGN+ +A+ L  +
Sbjct: 821  ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880

Query: 285  -MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
             M   + SP   TY  LI GL   G+L  A+ L + M   G   N   YN LI+G+ K G
Sbjct: 881  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940

Query: 344  DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + + A ++  +M ++GV P++ T+S L+D  C  G +D  +  + E+    L PDVV + 
Sbjct: 941  EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000

Query: 404  ALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             +I+GL K   ++E L L+ EM  ++ ITP ++T +SLI  L   G +  A   +    +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY----N 1056

Query: 463  KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            +       PN   + A+I+     G+   A  ++  M +    P+  TY  +
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 206/377 (54%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            +Q+   +++ L ++G+     E   EM   G+V  V TY  L++ C  + D      + 
Sbjct: 181 GVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEIL 240

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  +G+  ++V YTILI    +  ++ EAE ++  M E  V  ++Y Y +++   C+ 
Sbjct: 241 GLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRA 300

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            +V RA   + EM+   + PN  TFG L+ G+CK G++ AA      M   GV  N+ ++
Sbjct: 301 GNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIF 360

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N ++DG+CK G + EA  L   ME+     DVFTYNIL  GLC + + E A+ +L  M +
Sbjct: 361 NTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVE 420

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +G+  NVVT  + I+ YC+EG++ +       + ++GV PN+VT+++LID   K   +  
Sbjct: 421 KGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQ 480

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L  EMV K L+PDV  +T+LI G      + E L+L+ EML   I  +V T +++I 
Sbjct: 481 AHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIIS 540

Query: 443 GLFKNGRISNALNFFLE 459
           GL K GR   AL  + E
Sbjct: 541 GLSKEGRADEALKLYDE 557



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 227/442 (51%), Gaps = 7/442 (1%)

Query: 139 LNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +  F  M++ G ++  V   TI++  LC   ++  A+ +   M   GVVP ++TYN L++
Sbjct: 166 VRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLN 225

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
                 D     E    M    +  ++VT+ +L++       +  A   +  M +  V  
Sbjct: 226 ACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEM 285

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +++VY  +I  +C+AGN+  A +L  EM    I P+  T+  LI G+C  GQ+E AE LL
Sbjct: 286 DVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILL 345

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           ++M  +G+  NVV +N+++DGYCK G M++A  +   M  KG E +V T++ L  G CK 
Sbjct: 346 EEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKL 405

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
              + A  +   MV K + P+VV     I+   ++GN+ E  R  + + +  + P++ T 
Sbjct: 406 HRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTY 465

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI    KN ++  A     E  +K       P+   Y ++I   C   ++ +A KLF+
Sbjct: 466 NTLIDAYSKNEKVKQAHXLKAEMVEKG----LLPDVFTYTSLIHGECIVDKVDEALKLFN 521

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M    +R +  TYT ++ GL +  R  + + L  +M++MG++PD  + + +V G     
Sbjct: 522 EMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV-GSLHKP 580

Query: 558 DLKSAFRCSEFLKESRIGSSET 579
              +A + +E+  E +I +S+T
Sbjct: 581 SSHAALKQNEY-GELKINTSDT 601


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 222/437 (50%), Gaps = 5/437 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           +LP+    N ++ GL++  ++       + +V  G V DV TYG LI   C    + +A+
Sbjct: 357 LLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAV 415

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           NL+D+M + G++P++V Y  L+ G C + +M EA  ++  M + G  PN  TY  LM GY
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K    + A    +EM  + +     T+ +L++GL  V  +             G  P  
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN +I+G  KAG +  A  +  +M K  I+P++ TY   I G C     + A  LL  
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + ++GI  ++  YN+ ID +CK+G+M +AL     + + G+ P+V  ++S + G      
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A   Y  M+ + +V D  ++T LIDG SK GN+   L LY EM+   + P   T ++
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA 715

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L HGL ++G I  A    L+   + D    SPN V Y  +I A   DG++ +A +L  +M
Sbjct: 716 LTHGLCRSGDIDGA-KRLLDDMRRLD---VSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771

Query: 500 RSDNLRPDNCTYTTMLR 516
            S  + PD+ TY  + R
Sbjct: 772 LSSGVVPDDTTYDILPR 788



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 273/535 (51%), Gaps = 19/535 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY--------RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            +S+++    ++  ++EAL +         +K++V+ A      L++G    G+     +
Sbjct: 257 TYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATM----LMHGYCLNGEVGKALD 312

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++E+V  G+    VTYGVLI  C  +G   +   L  +MI++G+ P+   + ++I GL 
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 372

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +  +A  + + + + G VP+++TY  L+   CK   ++ A+  + +M    ++P++V
Sbjct: 373 RDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L+ G C+ G +  A   +  M   G  PN   Y  L+ G+ K      A +L +EM
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +  +S   +TYNILI GL  V ++   + +L++   EG +   +TYNS+I+G+ K G M
Sbjct: 492 RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  +  QM +KG+ PN+VT++S IDG C+    D A+ L   +    + PD+  + A 
Sbjct: 552 GSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAF 611

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR-ISNALNFFLEKTDKT 464
           ID   K GNM   L     +L+  +TP V   +S + G +KN + ++ A  F+     + 
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG-YKNLKMMAEASKFYYSMIKQR 670

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                  +  +Y  +I      G +  A +L+S+M ++++ PD+ T+T +  GL R+  +
Sbjct: 671 ----VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDI 726

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
                LL DM ++ + P+ V   +++     +G L+ AF+  + +  S +   +T
Sbjct: 727 DGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDT 781



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 231/518 (44%), Gaps = 48/518 (9%)

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++EM   G  AD   Y V+I  C   G    A+ LFDEM   G++P   +Y I I GLC
Sbjct: 172 LFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLC 231

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNA------------------------------- 194
                  A  +   MRE G  P   TY++                               
Sbjct: 232 KLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDV 291

Query: 195 -----LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
                LM GYC   +V +AL+ + E++   + P  VT+GVL+ G    G           
Sbjct: 292 VLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQ 351

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M + G+ P+ + +N +I G  +     +A+ L   +    + PDVFTY  LI  LC   +
Sbjct: 352 MIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQK 410

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L  A  L  KM + G+  ++VTY+SL+ GYC++G M++AL + S+M +KG  PN VT+++
Sbjct: 411 LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTT 470

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+ G  K    D A  L  EM    +      +  LI+GL     + E   + K  L   
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEG 530

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  T +S+I+G  K G + +A   + +   K      +PN V Y + I   C     
Sbjct: 531 FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG----ITPNIVTYTSFIDGYCRTNCC 586

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A KL   +R D ++PD   Y   +    +   M   +  L  ++K G+ PD  +    
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 550 VRGYQENGDLKSAFRCSEF---LKESRIGSSETEGHTT 584
           V GY+   +LK     S+F   + + R+  ++TE +TT
Sbjct: 647 VTGYK---NLKMMAEASKFYYSMIKQRV-VADTEIYTT 680



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 170/364 (46%), Gaps = 6/364 (1%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           +  M   GVVP+  +   L+      A    AL  + EM       +   + V++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G    A   F  MA  GV P+  VY   I G CK  +   A+ +  +M +    P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 297 YNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           Y+ ++  L  V +++ A  L  +M    G   +VV    L+ GYC  G++ KAL +  ++
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              GV P  VT+  LI G    G  D    L  +M+ + L+P    F  +I GL +D   
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           K+ + L K +++  + P VFT   LIH L K+ ++  A+N +    DK       P+ V 
Sbjct: 378 KDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW----DKMKEAGVKPSIVT 432

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +++   C  G++ +A KL+S+M      P+  TYTT+++G ++ K   +   LL +M 
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492

Query: 536 KMGI 539
           + G+
Sbjct: 493 QNGV 496



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 127/269 (47%)

Query: 67  HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
            ++E L  +     +P     N+++NG +K G   S +  Y +M   G+  ++VTY   I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
           D  C       A+ L   +   GI+P +  Y   I   C +  M  A      + + G+ 
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLT 637

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++  YN+ + GY  +  +  A +FY+ M+   +  +   +  L+DG  KVG +  A   
Sbjct: 638 PDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL 697

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           +  M    V P+   +  L  G C++G++  A  L  +M + ++SP++ TYN+LI     
Sbjct: 698 YSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            G+L+ A  L  +M   G++ +  TY+ L
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 13/251 (5%)

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M   G++ +  +   L+           AL++  +M  KG   +   +  +I    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G    A+ L+ EM    + PD  V+   I GL K  +    L++  +M EA   P   T 
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 438 SSLIHGLFKNGRISNALNF----FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           SS++  L K  R+  AL       L    K D        VL   ++   C +G++ KA 
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMD-------VVLATMLMHGYCLNGEVGKAL 311

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD-VMMLLADMIKMGIVPDAVINQVMVRG 552
            LF ++ SD + P N TY  +++G   A+ M D    L   MI+ G++P      ++++G
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKG 370

Query: 553 YQENGDLKSAF 563
              +   K A 
Sbjct: 371 LLRDKRWKDAI 381


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 219/440 (49%), Gaps = 5/440 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N +++GL ++G+       + EM+  G+V DVVTY  +ID  C    + KA  +
Sbjct: 225 PNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELV 284

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +MI  G +P  V Y  +IHG     +  E   MFR M   G++PN+ T N+ M   CK
Sbjct: 285 LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A EF+  M     +PN+VT+ VL+ G    G      N F  M   G+  +  V
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRV 404

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N +ID + K G + E M + ++M++  + PD  TY I+I     +G+L  A     +M 
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNI 380
             G+    + Y+SLI G+C  G++ KA  + S+M  +G+  PN+V F+S+I+  CK G +
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  ++  ++     PDV+ F +LIDG    G +++   +   M+ A I P V + ++L
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G  +NGRI + L  F E   K       P  + Y  I+  L  DG+ + A K+  +M 
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKG----VKPTTITYGIILHGLFNDGRTVGAKKMCHEMI 640

Query: 501 SDNLRPDNCTYTTMLRGLLR 520
                 D  T   +L GL R
Sbjct: 641 ESGTTMDISTCGIILGGLCR 660



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 227/449 (50%), Gaps = 8/449 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES-MF 177
           V TY +L+DCCC          LF   +  G++  V++ +IL+  L +  +  +  + + 
Sbjct: 119 VCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLL 178

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLC 235
             M E GV P+  +YN ++   C+ +   RAL+  H M+  +    PNVVT+  ++ GL 
Sbjct: 179 HRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLF 238

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + GE+  A N F  M + GV P++  Y  +ID  CKA  + +A  +  +M      P+  
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKV 298

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN +I G    GQ +   G+ ++M  +G++ N+VT NS +   CK G  ++A      M
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             KG +PN+VT+S L+ G    G     + L+  M    +V D  VF  +ID   K G M
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            ET+ ++ +M E  + P   T   +I    + GR+++A++ F    ++       P  ++
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKF----NQMIAMGLKPEGIV 474

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           Y ++IQ  C  G ++KA +L S+M S  + RP+   + +++  L +  R+++   +   +
Sbjct: 475 YHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFV 534

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           I +G  PD +    ++ GY   G ++ AF
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKIEKAF 563



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 227/487 (46%), Gaps = 6/487 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R    LP +   N L++   +  +    +  +   +  GL  DV+   +L+ C       
Sbjct: 111 RPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRS 170

Query: 136 MKALN-LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTY 192
              +N L   M + G+EP  + Y  ++  LC +++   A  +  +M  +  G  PN+ TY
Sbjct: 171 DDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTY 230

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N ++ G  +  +V++A   +HEM+   + P+VVT+  ++D LCK   +  A      M  
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN   YNC+I G+  +G   E   +  EM    + P++ T N  +  LC  G+ + 
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A      M  +G   N+VTY+ L+ GY  EG     L++ + M   G+  +   F+ +ID
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
              K G +D  M ++T+M  + ++PD   +  +I   S+ G + + +  + +M+   + P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
                 SLI G   +G +  A     E   +   G   PN V + +II +LC +G++++A
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSR---GIPRPNIVFFNSIINSLCKEGRVVEA 527

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             +F  +     RPD  T+ +++ G     ++     +L  MI  GI PD V    ++ G
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587

Query: 553 YQENGDL 559
           Y  NG +
Sbjct: 588 YCRNGRI 594



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 221/452 (48%), Gaps = 8/452 (1%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +S L+  ++  G   + L ++  +E   ++   +  N +++   K+G  D    
Sbjct: 364 KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETML 423

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M   G++ D  TYG++I      G +  A++ F++MI  G++P  ++Y  LI G C
Sbjct: 424 IFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFC 483

Query: 166 NENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               +V+A+ +   M   G+  PN+  +N++++  CK   V  A + +  ++H   +P+V
Sbjct: 484 MHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDV 543

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +TF  L+DG   VG++  A      M   G+ P++  YN LIDG+C+ G + + + L  E
Sbjct: 544 ITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGE 603

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    + P   TY I++ GL   G+  GA+ +  +M + G   ++ T   ++ G C+   
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            ++A+++  ++    V+ N+   +++ID   K    + A  L+  +    LVP+   +  
Sbjct: 664 DDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGV 723

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I  L K+G+++E   ++  M ++   PS   ++ +I  L + G I  A N+      K 
Sbjct: 724 MIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMF----KV 779

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           DG   S      + ++     +G+  +  KL 
Sbjct: 780 DGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 180/380 (47%), Gaps = 7/380 (1%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +P + TYN LMD  C+          +   L   L+ +V+   +L+  L          N
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 246 FFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILIK 302
             +H M + GV P+   YN ++   C+      A+ L   M K     SP+V TYN +I 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           GL   G++  A  L  +M ++G++ +VVTY S+ID  CK   M+KA  V  QM   G +P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N VT++ +I G   +G      G++ EM  + L+P++V   + +  L K G  KE    +
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M      P++ T S L+HG    G   + LN F    +  +G     +  ++  +I A
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLF----NSMEGNGIVADQRVFNIVIDA 411

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
               G + +   +F+ M+   + PD CTY  ++    R  R+ D M     MI MG+ P+
Sbjct: 412 YGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE 471

Query: 543 AVINQVMVRGYQENGDLKSA 562
            ++   +++G+  +G+L  A
Sbjct: 472 GIVYHSLIQGFCMHGNLVKA 491



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 206/443 (46%), Gaps = 20/443 (4%)

Query: 27  KSRKPHHVCYSVF--------------NALNSLEIPKF--NPSVFSTLIIAFSEMGHIEE 70
           K  KP+ V YSV               N  NS+E      +  VF+ +I A+ + G ++E
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDE 420

Query: 71  ALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
            + ++ +++   V+P       ++    + G+     + + +M+  GL  + + Y  LI 
Sbjct: 421 TMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQ 480

Query: 128 CCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
             C  G+++KA  L  EM+ +GI  P +V +  +I+ LC E ++VEA  +F  +   G  
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ T+N+L+DGY  V  + +A      M+   ++P+VV++  L+DG C+ G +      
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M   GV P    Y  ++ G    G    A  +C EM +   + D+ T  I++ GLC 
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
               + A  + +K+    +  N+   N++ID   K    E+A  +   ++  G+ PN  T
Sbjct: 661 NNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAST 720

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +  +I    K G+++ A  +++ M      P   +   +I  L + G + +      ++ 
Sbjct: 721 YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVD 780

Query: 427 EAKITPSVFTVSSLIHGLFKNGR 449
             +I+    TVS L+    + G+
Sbjct: 781 GKRISLEASTVSLLMALFSREGK 803



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 160/323 (49%), Gaps = 10/323 (3%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEV 80
           NL+K+++       + + + S  IP+ N   F+++I +  + G + EA  ++     I  
Sbjct: 487 NLVKAKE-------LVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGE 539

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
            P +   N+L++G    GK +  +   + M+  G+  DVV+Y  LID  C  G +   L 
Sbjct: 540 RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLI 599

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF EM+ KG++PT + Y I++HGL N+ + V A+ M   M E G   ++ T   ++ G C
Sbjct: 600 LFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +    + A+  + ++   N++ N+     ++D + KV +   A   F  ++  G+ PN  
Sbjct: 660 RNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAS 719

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  +I    K G++ EA ++ S MEK   +P     N +I+ L   G++  A   + K+
Sbjct: 720 TYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKV 779

Query: 321 YKEGILANVVTYNSLIDGYCKEG 343
             + I     T + L+  + +EG
Sbjct: 780 DGKRISLEASTVSLLMALFSREG 802


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 170/620 (27%), Positives = 275/620 (44%), Gaps = 106/620 (17%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI-----E 79
           +L   K H     + N + S  I K   S   +++  F++  HI++A   ++ +     E
Sbjct: 48  ILVRAKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPE 107

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P I   N LL   I++ + + V   Y++MVLCG+  +  T+ +LI   C    V  A 
Sbjct: 108 NKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAR 167

Query: 140 NLFDEM------------------------IDKGIE-----------PTVVIYTILIHGL 164
            LFDEM                         DKG+E           P  V+Y  ++   
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSF 227

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM-LHHNL--- 220
           C E +  ++E +   MRE G+VP++ T+N+ +   CK   V  A   + +M L   L   
Sbjct: 228 CREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFF----------------------VHMAKF----- 253
           +PN +T+ +++ G CKVG L  A   F                      V   KF     
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAET 347

Query: 254 --------GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
                   G+ P+I+ YN L+DG CK G L +A ++   M++  +SPD  TY  L+ G C
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            VG+++ A+ LLQ+M +   L N  T N L+      G + +A  +  +M EKG   + V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467

Query: 366 TFSSLIDGQCKAGNIDAAMGL------------------YTEMVIKSLV-----PDVVVF 402
           T + ++DG C +G +D A+ +                  Y  +V  SL+     PD++ +
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + L++GL K G   E   L+ EM+  K+ P     +  IH   K G+IS+A     +   
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K     C  +   Y ++I  L    QI +   L  +MR   + P+ CTY T ++ L    
Sbjct: 588 KG----CHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGG 643

Query: 523 RMLDVMMLLADMIKMGIVPD 542
           ++ D   LL +M++  I P+
Sbjct: 644 KVEDATNLLDEMMQKNIAPN 663



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 226/473 (47%), Gaps = 31/473 (6%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           +  Y VL++ C  +  V     L+ +M+  GI P    + +LI  LC+ + +  A  +F 
Sbjct: 112 IYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFD 171

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M E G  PN +T+  L+ GYCK    ++ LE  + M    + PN V +  ++   C+ G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREG 231

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI----SPDV 294
               +      M + G+ P+I  +N  I   CK G + +A  + S+ME  E      P+ 
Sbjct: 232 RNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN+++KG C VG LE A+ L + + +   L ++ +YN  + G  + G   +A +V  Q
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M +KG+ P++ +++ L+DG CK G +  A  +   M    + PD V +  L+ G    G 
Sbjct: 352 MIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGK 411

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +     L +EM+     P+ +T + L+H L+  GRIS A     +  +K   GY   + V
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEK---GY-GLDTV 467

Query: 475 LYAAIIQALCYDGQILKASKLFSDMR-----------------------SDNLRPDNCTY 511
               I+  LC  G++ KA ++   MR                        +N  PD  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +T+L GL +A R  +   L A+M+   + PD++   + +  + + G + SAFR
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 153/618 (24%), Positives = 264/618 (42%), Gaps = 95/618 (15%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   F  L+  + + G  ++ L +   +E   VLP     N +++   ++G+ D   +
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEK 238

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGI---EPTVVIYTILI 161
             E+M   GLV D+VT+   I   C +G V+ A  +F +M +D+ +    P  + Y +++
Sbjct: 239 LVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G C    + +A+++F S+RE   + +L +YN  + G  +      A     +M+   + 
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++ ++ +LMDGLCK+G L  A      M + GV P+   Y CL+ G+C  G +  A SL
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM +    P+ +T NIL+  L  +G++  AE LL+KM ++G   + VT N ++DG C 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 342 EGDMEKALSVCSQMTEKGVE-----------------------PNVVTFSSLIDGQCKAG 378
            G+++KA+ +   M   G                         P+++T+S+L++G CKAG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK--------------- 423
               A  L+ EM+ + L PD + +   I    K G +    R+ K               
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 424 --------------------EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
                               EM E  I+P++ T ++ I  L + G++ +A N   E   K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK 658

Query: 464 ------------------------------TDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
                                         T    C     LY+ +   L   GQ+LKA+
Sbjct: 659 NIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L   +           Y  ++  L +   +     +L  MI  G   D      ++ G 
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGL 778

Query: 554 QENGDLKSAFRCSEFLKE 571
            + G+ K A   +E + E
Sbjct: 779 GKMGNKKEANNFAEKMME 796



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 11/407 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P +Y YN L++   +   V      Y +M+   + P   TF +L+  LC    + AA   
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M + G  PN F +  L+ G+CKAG   + + L + ME F + P+   YN ++   C 
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV----EP 362
            G+ + +E L++KM +EG++ ++VT+NS I   CKEG +  A  + S M          P
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N +T++ ++ G CK G ++ A  L+  +     +  +  +   + GL + G   E   + 
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           K+M++  I PS+++ + L+ GL K G +S+A         K +G   SP+ V Y  ++  
Sbjct: 350 KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV--GLMKRNG--VSPDAVTYGCLLHG 405

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G++  A  L  +M  +N  P+  T   +L  L    R+ +   LL  M + G   D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
            V   ++V G   +G+L  A    E +K  R+  S   G+   S++G
Sbjct: 466 TVTCNIIVDGLCGSGELDKAI---EIVKGMRVHGSAALGNLGNSYIG 509



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 215/549 (39%), Gaps = 138/549 (25%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
           L +P+ N   ++ ++  F ++G +E+A  ++  I   + L ++Q+ N  L GL++ GKF 
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFI 343

Query: 102 SVWEFYEEMV-----------------LC------------------GLVADVVTYGVLI 126
                 ++M+                 LC                  G+  D VTYG L+
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C  G V  A +L  EM+     P      IL+H L N  ++ EAE + R M E G  
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHH-----------------------NLQPN 223
            +  T N ++DG C   ++++A+E    M  H                       N  P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++T+  L++GLCK G    A   F  M    + P+   YN  I   CK G +  A  +  
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLK 583

Query: 284 EMEK-----------------------FEI------------SPDVFTYNILIKGLCGVG 308
           +MEK                       FEI            SP++ TYN  I+ LC  G
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGG 643

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM-------EKALSVCSQ------- 354
           ++E A  LL +M ++ I  NV ++  LI  +CK  D        E A+S+C Q       
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703

Query: 355 --------------------MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
                               + ++G E     +  L+   CK   ++ A G+  +M+ K 
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKG 763

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA--------KITPSVFTVSSLIHGLFK 446
              D      +IDGL K GN KE     ++M+E         K+ P+   +    H  + 
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNATDIHQKKHNKYS 823

Query: 447 NGRISNALN 455
                N L+
Sbjct: 824 GNNWQNILH 832



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 129/274 (47%)

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           E  P ++ YN+L++      ++E    L + M   GI     T+N LI   C    ++ A
Sbjct: 107 ENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAA 166

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  +M EKG +PN  TF  L+ G CKAG  D  + L   M    ++P+ VV+  ++  
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSS 226

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             ++G   ++ +L ++M E  + P + T +S I  L K G++ +A   F +       G 
Sbjct: 227 FCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             PN + Y  +++  C  G +  A  LF  +R ++      +Y   L+GL+R  + ++  
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAE 346

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +L  MI  GI P      +++ G  + G L  A
Sbjct: 347 TVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 230/461 (49%), Gaps = 23/461 (4%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  GL   V+T+  LI+  C +G V++A  L ++M+ KG+   VV Y  +++G+C    
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
              A ++   M E  + P++  Y+A++D  CK    + A   + EML   + PNV T+  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++DG C  G    A      M +  + P++  +N LI    K G LFEA  LC EM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           I PD  TYN +I G C   + + A+ +   M       +VVT+N++ID YC+   +++ +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +++ +G+  N  T+++LI G C+  N++AA  L+ EM+   + PD +    L+ G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            ++  ++E L L++ +  +KI       + +IHG+ K  ++  A + F           C
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-----------C 345

Query: 470 S-------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           S       P+   Y  +I   C    I  A+ LF  M+ +   PDN TY T++RG L+A 
Sbjct: 346 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 405

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +   + L+++M   G   DA   + MV     +G L  +F
Sbjct: 406 EIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 445



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 227/448 (50%), Gaps = 9/448 (2%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           +I + P +   N L+NGL  +G+         +MV  GL  DVVTYG +++  C  GD  
Sbjct: 3   EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 62

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            ALNL  +M +  I+P VVIY+ +I  LC +    +A+ +F  M E G+ PN++TYN ++
Sbjct: 63  SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           DG+C     + A     +M+   + P+V+TF  L+    K G+L  A      M    +F
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN +I G CK     +A  +   M     SPDV T+N +I   C   +++    L
Sbjct: 183 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQL 238

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+++ + G++AN  TYN+LI G+C+  ++  A  +  +M   GV P+ +T + L+ G C+
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
              ++ A+ L+  + +  +  D V +  +I G+ K   + E   L+  +    + P V T
Sbjct: 299 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 358

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            + +I G      IS+A N    K    D G+  P++  Y  +I+     G+I K+ +L 
Sbjct: 359 YNVMISGFCGKSAISDA-NVLFHKM--KDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELI 414

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           S+MRS+    D  T   M+  L+   R+
Sbjct: 415 SEMRSNGFSGDAFT-IKMVADLITDGRL 441



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 166/325 (51%), Gaps = 8/325 (2%)

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M + G+ P +  +N LI+G C  G + EA +L ++M    +  DV TY  ++ G+C +G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            + A  LL KM +  I  +VV Y+++ID  CK+G    A  + S+M EKG+ PNV T++ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +IDG C  G    A  L  +M+ + + PDV+ F ALI    K+G + E  +L  EML   
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I P   T +S+I+G  K+ R  +A + F            SP+ V +  II   C   ++
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIIDVYCRAKRV 232

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +  +L  ++    L  +  TY T++ G      +     L  +MI  G+ PD +   ++
Sbjct: 233 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292

Query: 550 VRGYQENGDLKSAFRCSEFLKESRI 574
           + G+ EN  L+ A    E ++ S+I
Sbjct: 293 LYGFCENEKLEEALELFEVIQMSKI 317



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 2/258 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++++I  F +    ++A  ++  +   P +   N +++   +  + D   +   E+   
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GLVA+  TY  LI   C   ++  A +LF EMI  G+ P  +   IL++G C   K+ EA
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  ++   +  +   YN ++ G CK + V+ A + +  +  H ++P+V T+ V++ G
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C    +  A   F  M   G  P+   YN LI G  KAG + +++ L SEM     S D
Sbjct: 366 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425

Query: 294 VFTYNILIKGLCGVGQLE 311
            FT   ++  L   G+L+
Sbjct: 426 AFTIK-MVADLITDGRLD 442


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/425 (32%), Positives = 218/425 (51%), Gaps = 5/425 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  + N  L+ L K G  D  W F+ E  L     DV ++ + I   C  G+V K   L
Sbjct: 71  PSSFSFNNALDLLAKSGNLDRTWGFFTE-YLGRTQFDVYSFWITIKAFCENGNVSKGFEL 129

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G+ P V IYTILI   C    + +A+ MF  M + G+  N Y Y  +++G+ K
Sbjct: 130 LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 189

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                   E Y +M    + PN+ T+  L+   C+ G+L  A   F  ++K GV  N   
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C+ G + +A  L   M++  I+P   T+N+L+ GLC  GQL+ A   L+K+ 
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+   +VTYN LI G+ K G+      +  +M ++G+ P+ VT++ L++   ++ +I+
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  M    LVPD   +  LI GL   GNM E  +LYK M+E  + P+    +++I
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           +G  K      AL  FLE+  K      +PN   Y + IQ LC DG+ ++A +L  +M  
Sbjct: 430 NGYCKECNSYKALK-FLEEMVKNG---VTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 502 DNLRP 506
             L+P
Sbjct: 486 AGLKP 490



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 215/454 (47%), Gaps = 5/454 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +A++N  ++    +   + ++ MVL G      ++   +D     G++ +    F E + 
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +  +  V  + I I   C    + +   +   M   GV PN++ Y  L++  C+  D+++
Sbjct: 102 R-TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   +  M    L  N   + ++++G  K G  +     +  M   GV PN++ YN LI 
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +C+ G L  A  +  E+ K  ++ +  TYNILI GLC  GQ+  AEGLL++M +  I  
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
              T+N L+DG C  G ++KALS   ++   G+ P +VT++ LI G  K GN      L 
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + + P  V +T L++   +  ++++   ++  M    + P   T   LIHGL   
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G +  A   +    +     +  PN V+Y  +I   C +    KA K   +M  + + P+
Sbjct: 401 GNMVEASKLYKSMVEM----HLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             +Y + ++ L +  + ++   LL +M + G+ P
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 193/395 (48%), Gaps = 8/395 (2%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F+ M   G  P+ +++N  +D   K  +++R   F+ E L    Q +V +F + +   C+
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFWITIKAFCE 119

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +         M   GV PN+F+Y  LI+  C+ G++ +A  + S M+   ++ + + 
Sbjct: 120 NGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYI 179

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y I+I G    G  +    L QKM   G+L N+ TYNSLI  YC++G +  A  V  +++
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++GV  N VT++ LI G C+ G +  A GL   M    + P    F  L+DGL   G + 
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + L   +++    + P++ T + LI G  K G  S       E  D+      SP+ V Y
Sbjct: 300 KALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG----ISPSKVTY 355

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++        I KA ++F  M+   L PD  TY  ++ GL     M++   L   M++
Sbjct: 356 TILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M + P+ VI   M+ GY +  +   +++  +FL+E
Sbjct: 416 MHLQPNDVIYNTMINGYCKECN---SYKALKFLEE 447



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++Y++   +  +C+  +V++  E   +M    + PNV  + +L++  C+ G++  A   F
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M   G+  N ++Y  +I+G  K G   +   L  +M+   + P+++TYN LI   C  
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+L  A  +  ++ K G+  N VTYN LI G C++G + KA  +  +M    + P   TF
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           + L+DG C  G +D A+    ++ +  L P +V +  LI G SK GN      L +EM +
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I+PS  T + L++   ++  I  A   F     K  G    P+   Y  +I  LC  G
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMF--HLMKRIG--LVPDQHTYGVLIHGLCIKG 401

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            +++ASKL+  M   +L+P++  Y TM+ G  +       +  L +M+K G+ P+
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 177/370 (47%), Gaps = 5/370 (1%)

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           +A+++   +   + ++L+ +  M+     P+  +F   +D L K G L     FF     
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
              F +++ +   I   C+ GN+ +   L ++ME   +SP+VF Y ILI+  C  G ++ 
Sbjct: 102 RTQF-DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A+ +  +M   G+ AN   Y  +I+G+ K+G  +    +  +M   GV PN+ T++SLI 
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             C+ G +  A  ++ E+  + +  + V +  LI GL + G + +   L + M  A I P
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T + L+ GL   G++  AL++ LEK      G C P  V Y  +I      G     
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSY-LEKLKLI--GLC-PTLVTYNILISGFSKVGNSSVV 336

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S+L  +M    + P   TYT ++   +R+  +     +   M ++G+VPD     V++ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396

Query: 553 YQENGDLKSA 562
               G++  A
Sbjct: 397 LCIKGNMVEA 406



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 23/245 (9%)

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           ++I+   ++  ++ ++  +  MV+K   P    F   +D L+K GN+  T   + E L  
Sbjct: 43  AVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL-G 101

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
           +    V++    I    +NG +S       +   +T G   SPN  +Y  +I+A C +G 
Sbjct: 102 RTQFDVYSFWITIKAFCENGNVSKGFELLAQM--ETMG--VSPNVFIYTILIEACCRNGD 157

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           I +A  +FS M    L  +   YT M+ G  +     D   L   M  +G++P+      
Sbjct: 158 IDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNS 217

Query: 549 MVRGYQENGDLKSAFR-----------CSEFLKESRIGS-------SETEGHTTRSFLGH 590
           ++  Y  +G L  AF+           C+       IG        S+ EG   R    H
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH 277

Query: 591 LKPTV 595
           + PT 
Sbjct: 278 INPTT 282


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 253/497 (50%), Gaps = 23/497 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + + LANAK Y   R  +     N        H  +S+F+A++  +    N  +   L++
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRN-----GSDHQVHSIFHAISMCDNVCVNSIIADMLVL 161

Query: 61  AFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A++     E     +++        +  +C  L+  L+K+ +   V   Y+EM+   +  
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQP 221

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---ENKMVEAE 174
           +V T+ V+I+  C  G + KA ++ ++M   G  P VV Y  LI G C      KM +A+
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           ++ + M E  V PNL T+N L+DG+ K  ++  +L+ + EML  ++ PNV+T+  L++GL
Sbjct: 282 AVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGL 341

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C  G++  A      M   GV PN+  Y+ LI+G CK G + EA+ +   ++     P  
Sbjct: 342 CNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             YN+LI   C +G+++    L ++M +EGI+ +V TYN LI G C+ G++E A  +  Q
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +T KG+ P++VTF  L++G C  G    A  L  EM    L P  + +  ++ G  K+GN
Sbjct: 462 LTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGN 520

Query: 415 MKETLRLYKEM-LEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCS 470
           +K    +  +M  E ++  +V + + L+ G  + G++ +A   LN  LEK          
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG-------LV 573

Query: 471 PNHVLYAAIIQALCYDG 487
           PN + Y  + + +   G
Sbjct: 574 PNRITYEIVKEEMVDKG 590



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 233/466 (50%), Gaps = 10/466 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + L+G ++ G    V   +  + +C  V  + +   +L+               F     
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G + + +    L+  L  +N+  + E +++ M    + PN++T+N +++  CK   +N+
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG---ELRAAGNFFVHMAKFGVFPNIFVYNC 264
           A +   +M  +   PNVV++  L+DG CK+G   ++  A      M +  V PN+  +N 
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG  K  NL  ++ +  EM   ++ P+V TYN LI GLC  G++  A G+  KM   G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  N++TY+SLI+G+CK G M++AL +   +  +G  P    ++ LID  CK G ID   
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EM  + +VPDV  +  LI GL ++GN++   +L+ + L  K  P + T   L+ G 
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTNKGLPDLVTFHILMEGY 480

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN- 503
              G    A     E +         P H+ Y  +++  C +G +  A+ + + M  +  
Sbjct: 481 CSRGESRKAAMLLKEMSKMG----LKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           LR +  +Y  +L+G  +  ++ D  MLL +M++ G+VP+ +  +++
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 211/408 (51%), Gaps = 10/408 (2%)

Query: 172 EAESMFRSMREC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           +  S+F ++  C  V  N    + L+  Y   +      E +    ++  + + ++   L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPL 194

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           M  L K          +  M +  + PN+F +N +I+  CK G + +A  +  +M+ +  
Sbjct: 195 MVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGY 254

Query: 291 SPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           SP+V +YN LI G C   G G++  A+ +L++M +  +  N+ T+N LIDG+ K+ ++  
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPG 314

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           +L V  +M ++ V PNV+T++SLI+G C  G I+ A+G+  +MV   + P+++ + +LI+
Sbjct: 315 SLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLIN 374

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K+G MKE L ++  +      P+    + LI    K G+I +   F L++  + +G 
Sbjct: 375 GFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDG--FALKEEMEREG- 431

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+   Y  +I  LC +G I  A KLF  + +  L PD  T+  ++ G          
Sbjct: 432 -IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKA 489

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLKESRI 574
            MLL +M KMG+ P  +   +M++GY + G+LK+A    ++  KE R+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL 537



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 150/306 (49%), Gaps = 40/306 (13%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ LI  F +  ++  +L V++++   +V+P +   N+L+NGL   GK +      
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMR 354

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  G+  +++TY  LI+  C  G + +AL++FD +  +G  PT  +Y +LI   C  
Sbjct: 355 DKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL 414

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ +  ++   M   G+VP++ TYN L+ G C+  ++  A + + ++ +  L P++VTF
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTF 473

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFP------------------------------ 257
            +LM+G C  GE R A      M+K G+ P                              
Sbjct: 474 HILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533

Query: 258 ------NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
                 N+  YN L+ G+ + G L +A  L +EM +  + P+  TY I+ + +   G + 
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVP 593

Query: 312 GAEGLL 317
             EG L
Sbjct: 594 DIEGHL 599


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 264/560 (47%), Gaps = 47/560 (8%)

Query: 50  FNPSVFSTLIIAFSEM------------GHIEEALWVYRK-IEVLPAIQ-ACNALLNGLI 95
            NP V+S L+ AFSE               ++ A+ V+++ ++   ++  A N L+  L+
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLV 83

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           +    +  + FY +M+      + V+   L++C         A  +   M+ +G    V 
Sbjct: 84  RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            + IL+ GLC   +  +A S+ R MR   ++P++++YN ++ G+C+  ++ +ALE  +EM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                  ++VT+G+L+D  CK G++  A  F   M   G+  ++ VY  LI G C  G L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
               +L  E+ +   SP   TYN LI+G C +GQL+ A  + + M + G+  NV TY  L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDG C  G  ++AL + + M EK  EPN VT++ +I+  CK G +  A+ +   M  +  
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITPSVFTVSSLIHGLFKNGRISNA 453
            PD + +  L+ GL   G++ E  +L   ML+  +   P V + ++LIHGL K  R+  A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 454 LNFFLEKTDKTDGGYCSPNHVL-------------------------------YAAIIQA 482
           L+ +    +K   G     ++L                               Y A+I  
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G +  A  L   MR   L+P    Y  +L  L +   +     L  +M +    PD
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 543 AVINQVMVRGYQENGDLKSA 562
            V   +M+ G  + GD+KSA
Sbjct: 564 VVSFNIMIDGSLKAGDIKSA 583



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 243/497 (48%), Gaps = 46/497 (9%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E G     L   R+  ++P + + N ++ G  +  + +   E   EM   G    +VT+G
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID  C  G + +A+    EM   G+E  +V+YT LI G C+  ++   +++F  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P   TYN L+ G+CK+  +  A E +  M+   ++PNV T+  L+DGLC VG+ + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M +    PN   YN +I+  CK G + +A+ +   M+K    PD  TYNIL+ G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 304 LCGVGQLEGAEGLLQKMYKEGILAN--VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           LC  G L+ A  LL  M K+    +  V++YN+LI G CKE  + +AL +   + EK   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            + VT + L++   KAG+++ AM L+ ++    +V +   +TA+IDG  K G +     L
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M  +++ PSVF                                        Y  ++ 
Sbjct: 517 LCKMRVSELQPSVFD---------------------------------------YNCLLS 537

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           +LC +G + +A +LF +M+ DN  PD  ++  M+ G L+A  +     LL  M + G+ P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 542 D-----AVINQVMVRGY 553
           D      +IN+ +  GY
Sbjct: 598 DLFTYSKLINRFLKLGY 614



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 234/495 (47%), Gaps = 51/495 (10%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE--- 79
           LLK    +  C    + L  +      P VFS  T+I  F E   +E+AL +  +++   
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID--CCCGQGDVMK 137
              ++     L++   K GK D    F +EM   GL AD+V Y  LI   C CG+ D  K
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  FDE++++G  P  + Y  LI G C   ++ EA  +F  M E GV PN+YTY  L+D
Sbjct: 268 AL--FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C V     AL+  + M+  + +PN VT+ ++++ LCK G +  A      M K    P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCG--------- 306
           +   YN L+ G C  G+L EA  L   M K      PDV +YN LI GLC          
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 307 --------------------------VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
                                      G +  A  L +++    I+ N  TY ++IDG+C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K G +  A  +  +M    ++P+V  ++ L+   CK G++D A  L+ EM   +  PDVV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            F  +IDG  K G++K    L   M  A ++P +FT S LI+   K G +  A++FF   
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF--- 622

Query: 461 TDK-TDGGYCSPNHV 474
            DK  D G+    H+
Sbjct: 623 -DKMVDSGFEPDAHI 636



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 197/419 (47%), Gaps = 44/419 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYE 108
           V+++LI  F + G ++    ++   EVL     P     N L+ G  K G+     E +E
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFD--EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M+  G+  +V TY  LID  CG G   +AL L + MI+K  EP  V Y I+I+ LC + 
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 169 KMVEAESMFRSMRE-----------------CG--------------------VVPNLYT 191
            + +A  +   M++                 C                       P++ +
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YNAL+ G CK   +++AL+ Y  ++      + VT  +L++   K G++  A   +  ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              +  N   Y  +IDG CK G L  A  L  +M   E+ P VF YN L+  LC  G L+
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L ++M ++    +VV++N +IDG  K GD++ A S+   M+  G+ P++ T+S LI
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +   K G +D A+  + +MV     PD  +  +++      G   +   L K++++  I
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A G+L  M K G   NV  +N L+ G C+  +  KA+S+  +M    + P+V +++++I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C+   ++ A+ L  EM        +V +  LID   K G M E +   KEM    +  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +   +SLI G    G +      F E  ++ D    SP  + Y  +I+  C  GQ+ +A
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGD----SPCAITYNTLIRGFCKLGQLKEA 301

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S++F  M    +RP+  TYT ++ GL    +  + + LL  MI+    P+AV   +++  
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361

Query: 553 YQENGDLKSAFRCSEFLKESR 573
             ++G +  A    E +K+ R
Sbjct: 362 LCKDGLVADAVEIVELMKKRR 382



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 5/263 (1%)

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           QL+ A  + Q+    G  +     N+L+    +  + E A S   +M E     N V+ S
Sbjct: 53  QLKNAVSVFQQAVDSGS-SLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L++   +      A G+   M+ +    +V     L+ GL ++    + + L +EM   
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P VF+ +++I G  +   +  AL    E  ++  G  CS + V +  +I A C  G+
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKAL----ELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A     +M+   L  D   YT+++RG      +     L  ++++ G  P A+    
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 549 MVRGYQENGDLKSAFRCSEFLKE 571
           ++RG+ + G LK A    EF+ E
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIE 310


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 276/587 (47%), Gaps = 43/587 (7%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  ++  +  +G  E A  +   ++V    P +     L+ G  K+G+ +   +  
Sbjct: 198 NLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVV 257

Query: 108 EEMVLC-GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +E+     +V D V YG LI+  C +G +  A  + DEMID G++  + +Y  +I+G C 
Sbjct: 258 KEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCK 317

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +M E E + ++    GV  + Y+YN L+DGYC+   + +A E    M+ +      +T
Sbjct: 318 LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLT 377

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L++G C  G +  A   +  M K GV PN    + L+DG  KAG   +A++L  E  
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              ++ +V T N +I GLC   ++  AE L  +M +     + +TY +LIDGYCK GD+ 
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  +  +M   G  P+V  F+S I G   A        +  EM  K L P+ V + ALI
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD- 465
            G  K+GN+ +   LY EM+E  + P++F  S L+   ++ G++  A N  L+K   TD 
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA-NLVLQKLADTDM 616

Query: 466 ----------------------GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
                                 GG      +++  +I  LC  G++  A  LF D++   
Sbjct: 617 IQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKG 676

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLAD-MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             PDN TY++++ G   A   +D+   L D M+   + P+ V    ++ G  ++ ++  A
Sbjct: 677 FIPDNFTYSSLIHG-CSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRA 735

Query: 563 FRCSEFLKESRIGSSE-----------TEGHTTRSFLGHLKPTVYKE 598
                 L+   I  +             +G+TT +F   LK  + KE
Sbjct: 736 VSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAF--KLKQKMIKE 780



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 264/538 (49%), Gaps = 13/538 (2%)

Query: 32  HHVCYSVFNALNSLEIPK---FNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQ 85
           H V  ++F  L  +E+ K   F+ + F  L+ A ++ G +++AL+V+    K      ++
Sbjct: 73  HSVAPTLFPDL--VEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLR 130

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           +CN LLN L++ G   +    +++M   G + D  T  ++    C  G V  A +   EM
Sbjct: 131 SCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEM 190

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
            + G++  +V Y  ++ G C   +   A  +  S++  G+ PN+ TY  L+ GYCK   +
Sbjct: 191 EEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRM 250

Query: 206 NRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
             A +   E+  +  +  + V +G L++G C+ G +  A      M   GV  N+FVYN 
Sbjct: 251 EEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNT 310

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+G+CK G + E   L    E   ++ D ++YN L+ G C  G +  A      M + G
Sbjct: 311 MINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG 370

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
                +TYN+L++G+C  G ++ AL +   M ++GV PN ++ S+L+DG  KAG  + A+
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+ E + + L  +VV    +I+GL K+  M E   L+  M E        T  +LI G 
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G +  A    +E  +    G+  P+  ++ + I  L    Q  K + +  +M +  L
Sbjct: 491 CKLGDLGRATQIRIEMENL---GFV-PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGL 546

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            P+  TY  ++ G  +   + D  +L  +M++ G+ P+  I  V+V  +   G +  A
Sbjct: 547 SPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 236/474 (49%), Gaps = 13/474 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N LLNG   +G  D   + +  M+  G+V + ++   L+D     G   +ALNL+ E + 
Sbjct: 379 NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLA 438

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+   VV    +I+GLC   +M EAE +F  M+E     +  TY  L+DGYCK+ D+ R
Sbjct: 439 RGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGR 498

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +   EM +    P+V  F   + GL    +     +  V M+  G+ PN   Y  LI 
Sbjct: 499 ATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIA 558

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK GNL +A  L  EM +  + P++F  ++L+      G+++ A  +LQK+    ++ 
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQ 618

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
                    D      ++ K   +   +     +   + ++ +I G CK G +  A  L+
Sbjct: 619 ---------DCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            ++ +K  +PD   +++LI G S  G++     L  EML A++TP++ T +SLI+GL K+
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKS 729

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             +S A++ F    +K      SPN + Y  +I   C DG   +A KL   M  + ++P 
Sbjct: 730 CNVSRAVSLF----NKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT 785

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             TYT ++ GL     M + + LL  MI+  + P+ +    +++GY   G++K+
Sbjct: 786 VFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKA 839



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 267/600 (44%), Gaps = 71/600 (11%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ----ACNALLNGLI 95
           L+SL++   +P+V  ++ L+  + + G +EEA  V ++I+    I     A  AL+NG  
Sbjct: 222 LHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYC 281

Query: 96  KKGKFDSVWEFYEEMVLCGLVA-----------------------------------DVV 120
           ++G+ +      +EM+  G+                                     D  
Sbjct: 282 QRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEY 341

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           +Y  L+D  C +G + KA    D M+  G   T + Y  L++G C+   + +A  ++  M
Sbjct: 342 SYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLM 401

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            + GVVPN  + + L+DG+ K     +AL  + E L   L  NVVT   +++GLCK   +
Sbjct: 402 LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRM 461

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   F  M ++    +   Y  LIDG+CK G+L  A  +  EME     P V  +N  
Sbjct: 462 TEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSF 521

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GL    Q      +  +M  +G+  N VTY +LI G+CKEG++  A  +  +M EKG+
Sbjct: 522 ITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGL 581

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV--------------------- 399
           +PN+   S L+    + G +D A  +  ++    ++ D                      
Sbjct: 582 KPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGN 641

Query: 400 -----VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
                +++  +I GL K G + +   L++++      P  FT SSLIHG   +G I  A 
Sbjct: 642 HQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAF 701

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                  D+      +PN V Y ++I  LC    + +A  LF+ ++S  + P+  TY T+
Sbjct: 702 GL----RDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + G  +     +   L   MIK GI P      +++ G    G ++ A +  + + E+ +
Sbjct: 758 IDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNV 817



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 211/433 (48%), Gaps = 29/433 (6%)

Query: 56  STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           STL+  F + G  E+AL ++++     +   +   N ++NGL K  +     E +  M  
Sbjct: 414 STLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKE 473

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
                D +TY  LID  C  GD+ +A  +  EM + G  P+V ++   I GL    +  +
Sbjct: 474 WSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGK 533

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              +   M   G+ PN  TY AL+ G+CK  +++ A   Y EM+   L+PN+    VL+ 
Sbjct: 534 VNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVS 593

Query: 233 GLCKVGELRAAGNFFVHMA-------------KFGVFPNIF-------------VYNCLI 266
              + G++  A      +A               G   +I              ++N +I
Sbjct: 594 CFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVI 653

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G CK G + +A +L  +++     PD FTY+ LI G    G ++ A GL  +M    + 
Sbjct: 654 LGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLT 713

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N+VTYNSLI G CK  ++ +A+S+ +++  KG+ PN +T+++LIDG CK GN   A  L
Sbjct: 714 PNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKL 773

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M+ + + P V  +T LI GL   G M+E ++L  +M+E  + P+  T  +LI G  +
Sbjct: 774 KQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYAR 833

Query: 447 NGRISNALNFFLE 459
            G +      + E
Sbjct: 834 CGNMKAITKLYNE 846



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 215/422 (50%), Gaps = 14/422 (3%)

Query: 18  IKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK 77
           I  V   L K+R+       +F+ +     P  +   + TLI  + ++G +  A  +  +
Sbjct: 448 INTVINGLCKNRRMTEA-EELFHRMKEWSCP-CDSLTYRTLIDGYCKLGDLGRATQIRIE 505

Query: 78  IEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +E L   P+++  N+ + GL    +   V +   EM   GL  + VTYG LI   C +G+
Sbjct: 506 MENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGN 565

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A  L+ EM++KG++P + I ++L+     E K+ EA  + + + +  ++        
Sbjct: 566 LHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI-------- 617

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
             D      ++ +       +   N Q   + + +++ GLCK+G +  A N F  +   G
Sbjct: 618 -QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKG 676

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P+ F Y+ LI G   +G++  A  L  EM    ++P++ TYN LI GLC    +  A 
Sbjct: 677 FIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAV 736

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L  K+  +GI  N +TYN+LIDG+CK+G+  +A  +  +M ++G++P V T++ LI G 
Sbjct: 737 SLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL 796

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G ++ A+ L  +M+  ++ P+ + +  LI G ++ GNMK   +LY EM    + P+ 
Sbjct: 797 CTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPAN 856

Query: 435 FT 436
           +T
Sbjct: 857 WT 858



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 171/342 (50%), Gaps = 5/342 (1%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +  +F +L+      G+L+ A   F  M K G    +   N L++   +AG++  A+++ 
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +M      PD FT  I+ K  C  G++  A   L++M + G+  N+V Y++++DGYC+ 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVV 401
           G  E A  +   +  KG+ PNVVT++ L+ G CK G ++ A  +  E+   + +V D V 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           + ALI+G  + G M++  R+  EM++A +  ++F  +++I+G  K GR+         + 
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL--QA 330

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           ++  G   + +   Y  ++   C  G + KA +    M  +       TY T+L G    
Sbjct: 331 NEYRG--VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             + D + L   M+K G+VP+ +    ++ G+ + G  + A 
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 31/281 (11%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA------------------ 89
             P++F  S L+  F   G ++EA  V +K+     IQ C+A                  
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640

Query: 90  -----------LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
                      ++ GL K G+       +E++ + G + D  TY  LI  C   G +  A
Sbjct: 641 NHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA 700

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             L DEM+   + P +V Y  LI+GLC    +  A S+F  ++  G+ PN  TYN L+DG
Sbjct: 701 FGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG 760

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           +CK  +   A +   +M+   +QP V T+ +L+ GLC  G +  A      M +  V PN
Sbjct: 761 HCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPN 820

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              Y  LI G+ + GN+     L +EM    + P  +T ++
Sbjct: 821 FITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWTGHV 861



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 21/196 (10%)

Query: 391 VIKSLVPDVV-----------VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           V  +L PD+V            F  L+   +  G +K+ L ++ EM +A    ++ + + 
Sbjct: 75  VAPTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNR 134

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCS---PNHVLYAAIIQALCYDGQILKASKLF 496
           L++ L + G I  A+  F +         C+   P+    A + +A C DG++  A+   
Sbjct: 135 LLNQLVQAGDIGTAVAVFQQMR-------CAGTLPDDFTVAIMAKAYCRDGRVAHAADFL 187

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M    L  +   Y  ++ G  R  +      LL  +   G+ P+ V   ++V+GY + 
Sbjct: 188 KEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKE 247

Query: 557 GDLKSAFRCSEFLKES 572
           G ++ A +  + +KE+
Sbjct: 248 GRMEEAEKVVKEIKEN 263


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 270/578 (46%), Gaps = 62/578 (10%)

Query: 50  FNPSVFSTLIIAFSEMG-HIEEALWVYRKIEV---LPA-IQACNALLNGLIKKGKFDSVW 104
           F  S+FS   I  + +G +  E +W++ K  +    P  +  CN +LN L  +GK     
Sbjct: 191 FKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAE 250

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++M  C L  + VTY  +++    +G    AL + D+M   GIE  +  Y I+I  L
Sbjct: 251 SMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +   A  + + MRE  + P+  +YN L+ G+     +N A+  +++ML  +L+P+V
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP--------------------------- 257
            T+  L+DG C+ G    A      M   GV P                           
Sbjct: 370 ATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSA 429

Query: 258 ------------------------NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
                                   ++  +NC+ID +C+ GN+ EA S+   M +    PD
Sbjct: 430 LINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 489

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TY  L++GLC  G L  A+  +  + ++    +  T N+L+ G CK G +++AL +C 
Sbjct: 490 ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 549

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  + + P+  T++ L+DG CK G +  A+ L   M+ K LVPD + +T L++GL  +G
Sbjct: 550 KMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 609

Query: 414 NMKETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
            +K    +++E++ +  +       +S+++G  K G+I N +   +    + +     P+
Sbjct: 610 QVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI-NEIERLMRNMHENE---VYPS 665

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y  ++      GQ+ +   L+ DM  + ++PDN TY  ++ GL     +   +  L 
Sbjct: 666 SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 725

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            M+  G+ PD +   ++++ + E   + +A +   ++K
Sbjct: 726 KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 763



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 256/524 (48%), Gaps = 29/524 (5%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG-- 133
           R++ + P   + N L++G   +GK +     + +M+   L   V TY  LID  C  G  
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 134 ------------------DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
                             +V KA  +   M+  GI+P V+ Y+ LI    NE  + EAE 
Sbjct: 386 DEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQ 441

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
             + M    +  ++ ++N ++D YC+  +V  A   Y  M+ H   P++ T+G L+ GLC
Sbjct: 442 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 501

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G L  A  F V++ +     +    N L+ G CK G L EA+ LC +M    I PD +
Sbjct: 502 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 561

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY IL+ G C  G++  A  LLQ M ++G++ + + Y  L++G   EG ++ A  +  ++
Sbjct: 562 TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 621

Query: 356 T-EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
             ++G+  + + ++S+++G  K G I+    L   M    + P    +  L+ G  K G 
Sbjct: 622 ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 681

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +  TL LY++M++  I P   T   LI GL + G I  A+ F LEK    +G +  P+++
Sbjct: 682 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF-LEKM-VLEGVF--PDNL 737

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            +  +I+A     ++  A +LFS M+  ++ P + TY  M+ GL+R   +     +L DM
Sbjct: 738 AFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDM 797

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           ++ G+ P       ++      GD+  AF   E +K   +  SE
Sbjct: 798 VESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSE 841



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 263/551 (47%), Gaps = 26/551 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVY--------RKIEVLPAIQACNALL 91
            N +      PSV  ++ LI  +   G  +EA  V         R  EV  A Q    +L
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCML 416

Query: 92  -----------NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
                      + LI +G      +F + M    +  DV ++  +ID  C +G+V++A +
Sbjct: 417 ADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFS 476

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           ++D M+  G  P +  Y  L+ GLC    +V+A+     + E     +  T N L+ G C
Sbjct: 477 VYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGIC 536

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   ++ AL+   +M+  N+ P+  T+ +L+DG CK G++  A      M + G+ P+  
Sbjct: 537 KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTI 596

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            Y CL++G    G +  A  +  E+  K  +  D   YN ++ G    GQ+   E L++ 
Sbjct: 597 AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 656

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M++  +  +  +YN L+ GY K+G + + L +   M ++G++P+ VT+  LI G C+ G 
Sbjct: 657 MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 716

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I+ A+    +MV++ + PD + F  LI   S+   M   L+L+  M    ++PS  T  +
Sbjct: 717 IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVA 776

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +++GL +   +  +        D  + G   P H  Y A+I A C  G I  A +L  DM
Sbjct: 777 MVNGLIRKNWLQQSYEIL---HDMVESGL-QPKHTHYIALINAKCRVGDIDGAFELKEDM 832

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           ++  + P     ++++RGL +  ++ + +++ + +++ G+VP       ++ G  +   +
Sbjct: 833 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 892

Query: 560 KSAFRCSEFLK 570
             AF   + ++
Sbjct: 893 DDAFHLKQLME 903



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 251/494 (50%), Gaps = 12/494 (2%)

Query: 54  VFSTLIIAFSEMGHIEEA--LWVYRKIEVLPAI--QACNALLNGLIKKGKFDSVWEFYEE 109
            + +L+    + GH+ +A    VY  +E   AI  +  N LL G+ K G  D   +  E+
Sbjct: 492 TYGSLLRGLCQGGHLVQAKEFMVYL-LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 550

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV   ++ D  TY +L+D  C +G V+ AL L   M++KG+ P  + YT L++GL NE +
Sbjct: 551 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 610

Query: 170 MVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           +  A  MF+ +  +E G+  +   YN++M+GY K   +N        M  + + P+  ++
Sbjct: 611 VKAASYMFQEIICKE-GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASY 669

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +LM G  K G+L      +  M K G+ P+   Y  LI G C+ G +  A+    +M  
Sbjct: 670 NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 729

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD   ++ILIK      ++  A  L   M    +  +  TY ++++G  ++  +++
Sbjct: 730 EGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQ 789

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           +  +   M E G++P    + +LI+ +C+ G+ID A  L  +M    +VP  V  ++++ 
Sbjct: 790 SYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVR 849

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K G ++E + ++  ++ A + P++ T ++L+HGL K  +I +A  F L++  ++ G 
Sbjct: 850 GLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA--FHLKQLMESCG- 906

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               + V Y  +I  LC    I  A  L+ +M+S  L P+  TY T+   +     M D 
Sbjct: 907 -LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDG 965

Query: 528 MMLLADMIKMGIVP 541
             LL D+   GIVP
Sbjct: 966 EKLLKDIEDRGIVP 979



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 235/497 (47%), Gaps = 8/497 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           F+ + F+ +I ++ + G++ EA  VY  +      P I    +LL GL + G      EF
Sbjct: 453 FDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEF 512

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              ++      D  T   L+   C  G + +AL+L ++M+ + I P    YTIL+ G C 
Sbjct: 513 MVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 572

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-HHNLQPNVV 225
             K+V A  + + M E G+VP+   Y  L++G      V  A   + E++    L  + +
Sbjct: 573 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 632

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  +M+G  K G++        +M +  V+P+   YN L+ G+ K G L   + L  +M
Sbjct: 633 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 692

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  I PD  TY +LI GLC  G +E A   L+KM  EG+  + + ++ LI  + ++  M
Sbjct: 693 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKM 752

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL + S M    + P+  T+ ++++G  +   +  +  +  +MV   L P    + AL
Sbjct: 753 SNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIAL 812

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+   + G++     L ++M    + PS    SS++ GL K G++  A+  F   +    
Sbjct: 813 INAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF---SSIMR 869

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
            G   P    +  ++  LC + +I  A  L   M S  L+ D  TY  ++ GL   K + 
Sbjct: 870 AGMV-PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCIC 928

Query: 526 DVMMLLADMIKMGIVPD 542
           D + L  +M   G++P+
Sbjct: 929 DALDLYEEMKSKGLLPN 945



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 198/404 (49%), Gaps = 10/404 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA-C---NALLNGLIKKGKFDSVWEFYEEM 110
           ++ L+      G ++ A +++++I     + A C   N+++NG +K G+ + +      M
Sbjct: 598 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 657

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
               +     +Y +L+     +G + + L L+ +M+ +GI+P  V Y +LI GLC    +
Sbjct: 658 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 717

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A      M   GV P+   ++ L+  + + + ++ AL+ +  M   ++ P+  T+  +
Sbjct: 718 EIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAM 777

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GL +   L+ +      M + G+ P    Y  LI+  C+ G++  A  L  +M+   +
Sbjct: 778 VNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGV 837

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P     + +++GLC  G++E A  +   + + G++  + T+ +L+ G CKE  ++ A  
Sbjct: 838 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 897

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G++ +VVT++ LI G C    I  A+ LY EM  K L+P++  +  L   + 
Sbjct: 898 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 957

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             G M++  +L K++ +  I PS     SL        R+ NA+
Sbjct: 958 ATGTMQDGEKLLKDIEDRGIVPSYKHPESL------EWRMENAI 995


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 257/498 (51%), Gaps = 25/498 (5%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + + LANAK Y   R  +     N        H  +S+F+A++  +    N  +   L++
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRN-----GSDHQVHSIFHAISMCDNVCVNSIIADMLVL 161

Query: 61  AFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           A++     E     +++       L A+ +C  L+  L+K+ +   V   Y+EM+   + 
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSAL-SCKPLMIALLKENRSADVEYVYKEMIRRKIQ 220

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---ENKMVEA 173
            +V T+ V+I+  C  G + KA ++ ++M   G  P VV Y  LI G C      KM +A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           +++ + M E  V PNL T+N L+DG+ K  ++  +++ + EML  +++PNV+++  L++G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC  G++  A +    M   GV PN+  YN LI+G CK   L EA+ +   ++     P 
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
              YN+LI   C +G+++    L ++M +EGI+ +V TYN LI G C+ G++E A  +  
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           Q+T KG+ P++VTF  L++G C+ G    A  L  EM    L P  + +  ++ G  K+G
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519

Query: 414 NMKETLRLYKEM-LEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYC 469
           N+K    +  +M  E ++  +V + + L+ G  + G++ +A   LN  LEK         
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG-------L 572

Query: 470 SPNHVLYAAIIQALCYDG 487
            PN + Y  + + +   G
Sbjct: 573 VPNRITYEIVKEEMVDQG 590



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 233/466 (50%), Gaps = 10/466 (2%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           + L+G ++ G    V   +  + +C  V  + +   +L+               F     
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G + + +    L+  L  EN+  + E +++ M    + PN++T+N +++  CK   +N+
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG---ELRAAGNFFVHMAKFGVFPNIFVYNC 264
           A +   +M  +   PNVV++  L+DG CK+G   ++  A      M +  V PN+  +N 
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LIDG  K  NL  +M +  EM   ++ P+V +YN LI GLC  G++  A  +  KM   G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  N++TYN+LI+G+CK   +++AL +   +  +G  P    ++ LID  CK G ID   
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  EM  + +VPDV  +  LI GL ++GN++   +L+ + L +K  P + T   L+ G 
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGY 480

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN- 503
            + G    A     E +         P H+ Y  +++  C +G +  A+ + + M  +  
Sbjct: 481 CRKGESRKAAMLLKEMSKMG----LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           LR +  +Y  +L+G  +  ++ D  MLL +M++ G+VP+ +  +++
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 216/410 (52%), Gaps = 14/410 (3%)

Query: 172 EAESMFRSMREC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           +  S+F ++  C  V  N    + L+  Y   +      E +    ++  + + ++   L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194

Query: 231 MDGLCKVGELRAAGNFFVH--MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           M  L K  E R+A   +V+  M +  + PN+F +N +I+  CK G + +A  +  +M+ +
Sbjct: 195 MIALLK--ENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252

Query: 289 EISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
             SP+V +YN LI G C   G G++  A+ +L++M +  +  N+ T+N LIDG+ K+ ++
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             ++ V  +M ++ V+PNV++++SLI+G C  G I  A+ +  +MV   + P+++ + AL
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+G  K+  +KE L ++  +      P+    + LI    K G+I +   F L++  + +
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG--FALKEEMERE 430

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           G    P+   Y  +I  LC +G I  A KLF  + S  L PD  T+  ++ G  R     
Sbjct: 431 G--IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR 487

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLKESRI 574
              MLL +M KMG+ P  +   ++++GY + G+LK+A    ++  KE R+
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 25/332 (7%)

Query: 6   ANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVF--------NALNSLEIPK------FN 51
            N K+YK A  ++K++ EN +    P+   +++         N   S+++ K        
Sbjct: 273 GNGKMYK-ADAVLKEMVENDVS---PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V S  +LI      G I EA+ +  K+    V P +   NAL+NG  K        + 
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +  +   G V     Y +LID  C  G +     L +EM  +GI P V  Y  LI GLC 
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
              +  A+ +F  +   G+ P+L T++ LM+GYC+  +  +A     EM    L+P  +T
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFP-NIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           + ++M G CK G L+AA N    M K      N+  YN L+ G+ + G L +A  L +EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
            +  + P+  TY I+ + +   G +   EG L
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 20/320 (6%)

Query: 265 LIDGHCKAGN------LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE-GAEGLL 317
            +DG  + G+      +F A+S+C  +    I  D     +L+       + E G E   
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIAD-----MLVLAYANNSRFELGFEAFK 177

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           +  Y  G   + ++   L+    KE        V  +M  + ++PNV TF+ +I+  CK 
Sbjct: 178 RSGY-YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKT 236

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDG---LSKDGNMKETLRLYKEMLEAKITPSV 434
           G ++ A  +  +M +    P+VV +  LIDG   L  +G M +   + KEM+E  ++P++
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T + LI G +K+  +  ++  F E  D+       PN + Y ++I  LC  G+I +A  
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQD----VKPNVISYNSLINGLCNGGKISEAIS 352

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           +   M S  ++P+  TY  ++ G  +   + + + +   +   G VP   +  +++  Y 
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G +   F   E ++   I
Sbjct: 413 KLGKIDDGFALKEEMEREGI 432


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 224/489 (45%), Gaps = 8/489 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP ++  N LL  L +   F  +      M       ++ TY  LI+  C  GD+  A  
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
               ++  G+ P    YT  + G C    +  A  +F  M   G +   +TY AL+ G  
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V  A+  +  M   +  P+   +  ++ GLC+ G    A          G  PNI 
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           VYN LIDG+C AG +  A+ +   M+    SP+V TY  LI GLC  G++E A  L  +M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  NVVTY +LI G C EG ++ A  +   M   G+ PN  TFS LID  CK   +
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A      +V K +  + VV+T+LIDGL K G +     L ++M+     P   + SSL
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL +  ++S A     +  +K  G   SP  V Y  II  L  +       K+F  M 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEK--GIQASP--VTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  + PD  TYT  +R      RM D   ++  M+  G+ P+ V    ++RGY   G + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 561 SAFRCSEFL 569
            AF   E +
Sbjct: 510 QAFSTFEVM 518



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 247/523 (47%), Gaps = 17/523 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+      G + EA+ V+   R     P       +++GL + G+ +      EE 
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   ++V Y  LID  C  G++  AL +F+ M      P V  YT LIHGLC   K+
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M E G+ PN+ TY AL+ G C    +  A    H M  + L PN  TF VL
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK  ++  A  F   + K GV  N  VY  LIDG CK G +  A  L  +M     
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y+ LI GLC   +L  A  +L+ M ++GI A+ VTY  +ID   +E   E    
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   G+ P++VT++  +   C+ G ++ A  +  +MV + + P++V +  LI G +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-----------LE 459
             G + +    ++ M+     P+  + + L+  + K     N+++ +           LE
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              +      +    +Y+  I+ LC   ++ +A   F  M++ NL P    YT+++    
Sbjct: 564 DITERQLPLAAD---IYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCC 620

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           R K + D + LL  M K G +P     ++++    E G+ ++A
Sbjct: 621 RLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTA 663



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 251/533 (47%), Gaps = 21/533 (3%)

Query: 36  YSVFNALNSL--EIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNAL 90
           + +F  + SL   +P  N   ++TLI A+   G I  A   L       + P   A  + 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  + G        +  M L G +    TY  L+    G G V +A+ +F  M     
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P   +Y  ++HGLC   +  EAE +       G  PN+  YNAL+DGYC   ++  AL+
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  M  +   PNV T+  L+ GLCK G++  A   F  M + G+ PN+  Y  LI G C
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G+L  A  L   ME   + P+ +T+++LI  LC   ++E A+  L  + K+G+  N V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y SLIDG CK G ++ A  +  +M  +G  P+  ++SSLIDG C+   +  A  +  +M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + K +    V +T +ID L ++   +   +++ +M+   I P + T +  +    + GR+
Sbjct: 414 MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A +  ++  D+  G +  PN V Y  +I+     G + +A   F  M     +P+  +
Sbjct: 474 EDAESMIVQMVDR--GVF--PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 511 YTTMLR------------GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           YT +LR             + +   M D+ +LL D+ +  +   A I    +R
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 232/515 (45%), Gaps = 46/515 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   NAL++G    G+ +   + +E M       +V TY  LI   C  G V +A+ L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M++ G+EP VV YT LI G CNE  +  A  +   M   G+VPN +T++ L+D  CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V  A  F   ++   ++ N V +  L+DGLCK G++ AA      M   G  P+   
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LIDG C+   L +A  +  +M +  I     TY I+I  L      EG + +  KM 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI  ++VTY   +  YC+EG ME A S+  QM ++GV PN+VT+++LI G    G + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALID------------GLSKDGNMKETLRLYKEMLEAK 429
            A   +  MV K   P+   +T L+              + K  +MK+   L +++ E +
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQ 569

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK-------------------------- 463
           +  +    S  I  L +  R+  A +FF+   +                           
Sbjct: 570 LPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDAL 629

Query: 464 ------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                 T  GY  P+   Y  II +LC  G    A ++F D+       D   +  ++ G
Sbjct: 630 TLLDSMTKSGYL-PHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYG 688

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           LL+   + +   LL+ M + G  P   IN  M+ G
Sbjct: 689 LLQKGSVAEFSSLLSVMKEHGYQPSNTIN-AMITG 722



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 168/355 (47%), Gaps = 4/355 (1%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N+ T+  L++  C  G++ AA      +   G+ P+ + Y   + G+C+AG L  A  + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M         FTY  L+ GL G G +  A  +   M  +    +   Y +++ G C+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G  E+A  +  +    G EPN+V +++LIDG C AG ++ A+ ++  M      P+V  +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LI GL K G ++  + L+  M+EA + P+V T ++LI G    G +  A  F L    
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCA--FRLLHLM 308

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +T+G    PN   ++ +I ALC   ++ +A      +    ++ +   YT+++ GL +  
Sbjct: 309 ETNG--LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++     L+  MI  G VPDA     ++ G      L  A    E + E  I +S
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 201/478 (42%), Gaps = 86/478 (17%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    + G +E A+ ++ R +E  + P +    AL+ G   +G     +   
Sbjct: 246 NVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL 305

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   GLV +  T+ VLID  C +  V +A      ++ KG++   V+YT LI GLC  
Sbjct: 306 HLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKT 365

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ------ 221
            K+  A+ + + M   G VP+ ++Y++L+DG C+   +++A     +M+   +Q      
Sbjct: 366 GKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTY 425

Query: 222 -----------------------------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
                                        P++VT+ V +   C+ G +  A +  V M  
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL------------ 300
            GVFPN+  YN LI G+   G + +A S    M      P+  +Y +L            
Sbjct: 486 RGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDN 545

Query: 301 -----------------------------------IKGLCGVGQLEGAEGLLQKMYKEGI 325
                                              I+ LC V +LE A+     M    +
Sbjct: 546 SVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANL 605

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             +   Y S+ID  C+   +  AL++   MT+ G  P++ ++  +I   C+ GN   A  
Sbjct: 606 TPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKE 665

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           ++ ++++K    D +V+  LI GL + G++ E   L   M E    PS  T++++I G
Sbjct: 666 VFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITG 722


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 227/465 (48%), Gaps = 7/465 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--IEPTVVIYT 158
           ++V      M   G V + V+Y +++   C      +AL+L   M  +G    P VV Y+
Sbjct: 210 EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYS 269

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +IHG  NE +  +A S+F  M   GV P++ TYN ++D  CK   +++A     +M   
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             QP+ VT+  ++ G   +G L+ A   F  M K G+ PNI   N  +   CK G   EA
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
                 M      PD+F+Y  L+ G    G      GL   M   GI AN   +  LI  
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           Y K G ++ A+ + ++M ++GV P+VVT+S++I    + G +  AM  + +MV + + P+
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT-PSVFTVSSLIHGLFKNGRISNALNFF 457
             V++++I G    G + +   L  EM+   I  P +   SS+I+ L K+GR+ +A + F
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
              TD  +     P  + + ++I   C  G++ KA K+   M    + PD  TY T+L G
Sbjct: 570 DLATDIGE----RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +  R+ D + L  +M + G+ P+ V   +M+ G    G   +A
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 244/548 (44%), Gaps = 67/548 (12%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + A + +++G   +G+       + EM   G+  DVVTY ++ID  C    + KA  +
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M   G +P  V Y+ +IHG     ++ EA  MFR M++ G++PN+ T N+ +   CK
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 A EF+  M     +P++ ++  L+ G    G        F  M   G+  N  V
Sbjct: 383 HGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +  LI  + K G + +AM + +EM++  +SPDV TY+ +I     +G+L  A     +M 
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV--------------------- 360
             GI  N   Y+S+I G+C  G + KA  + S+M  KG+                     
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562

Query: 361 ---------------EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
                           P V+TF+SLIDG C  G +D A  +   M +  + PD+V +  L
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL 622

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DG  K+G + + L L++EM    + P+  T   ++ GLF+ GR   A   F E  +   
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682

Query: 466 -----------GGYCSPNHVLYAAI--------------------IQALCYDGQILKASK 494
                      GG C  N    A I                    I A+    +  +A +
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF+ + +  L P+  TY  M+  LL+   + D   + + M K GIVP + +   ++R   
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802

Query: 555 ENGDLKSA 562
           E G++  A
Sbjct: 803 EKGEIAKA 810



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 248/508 (48%), Gaps = 8/508 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S +I  ++ +G ++EA  ++R+++   ++P I  CN+ L  L K G+     EF++ M
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+ +Y  L+     +G     + LF+ M   GI     ++TILIH       +
Sbjct: 397 TAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMV 456

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F  M++ GV P++ TY+ ++  + ++  +  A+E +++M+   +QPN   +  +
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           + G C  G L  A      M   G+  P+I  ++ +I+  CK G + +A  +        
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P V T+N LI G C VG+++ A  +L  M   G+  ++VTYN+L+DGY K G +   L
Sbjct: 577 ERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGL 636

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  +M  KGV+PN VT+  ++ G  +AG   AA   + EM+       V ++  ++ GL
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            ++    E + L++++    +  S+  ++++I+ ++K  R   A   F   T    G   
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF--ATISASG--L 752

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y  +I  L  DG +  A+ +FS M    + P +     ++R LL    +     
Sbjct: 753 LPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENG 557
            L+ +    I+ +A    +M+  +   G
Sbjct: 813 YLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 8/453 (1%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V    TY +L+DCCC        L LF  ++  G++   +    L+  LC  N+  EA +
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 176 -MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMD 232
            +   M E G VPN  +Y+ ++   C  +   RAL+    M        P+VV +  ++ 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G    GE   A + F  M + GV P++  YN +ID  CKA  + +A  +  +M      P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D  TY+ +I G   +G+L+ A  + ++M K G++ N+VT NS +   CK G  ++A    
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
             MT KG +P++ ++ +L+ G    G     +GL+  M    +  +  VFT LI   +K 
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + + + ++ EM +  ++P V T S++I    + GR+++A    +EK ++       PN
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA----MEKFNQMVARGIQPN 509

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLL 531
             +Y++IIQ  C  G ++KA +L S+M +  + RPD   +++++  L +  R++D   + 
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
                +G  P  +    ++ GY   G +  AF+
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFK 602



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 221/465 (47%), Gaps = 11/465 (2%)

Query: 8   AKLYK--NARCLIKDVT--ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIA 61
           AK+++    R LI ++    + L S   H          +S+      P +FS  TL+  
Sbjct: 355 AKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHG 414

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQACNA---LLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           ++  G   + + ++  ++       C+    L++   K+G  D     + EM   G+  D
Sbjct: 415 YASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPD 474

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           VVTY  +I      G +  A+  F++M+ +GI+P   +Y+ +I G C    +V+A+ +  
Sbjct: 475 VVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVS 534

Query: 179 SMRECGVV-PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            M   G+  P++  ++++++  CK   V  A + +        +P V+TF  L+DG C V
Sbjct: 535 EMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLV 594

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A      M   GV P+I  YN L+DG+ K G + + ++L  EM++  + P+  TY
Sbjct: 595 GKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTY 654

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++ GL   G+   A     +M + G    V  Y  ++ G C+    ++A+ +  ++  
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             V+ ++   +++I+   K    + A  L+  +    L+P+   +  +I  L KDG +++
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVED 774

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
              ++  M ++ I P    ++ +I  L + G I+ A N +L K D
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN-YLSKVD 818



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 205/412 (49%), Gaps = 11/412 (2%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +FN++ S  I   N  VF+ LI A+++ G +++A+ ++ +++   V P +   + +++  
Sbjct: 427 LFNSMKSNGIAA-NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF 485

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPT 153
            + G+     E + +MV  G+  +   Y  +I   C  G ++KA  L  EMI+KGI  P 
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V ++ +I+ LC + ++++A  +F    + G  P + T+N+L+DGYC V  +++A +   
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M    ++P++VT+  L+DG  K G +      F  M + GV PN   Y  ++ G  +AG
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
               A     EM +   +  V  Y I++ GLC     + A  L QK+    +  ++   N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I+   K    E+A  + + ++  G+ PN  T+  +I    K G ++ A  +++ M   
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785

Query: 394 SLVPDVVVFTALIDGL------SKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            +VP   +   +I  L      +K GN    +   + +LEA  T  + ++ S
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFS 837



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 178/372 (47%), Gaps = 4/372 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +ST+I  FS MG + +A+  + ++    + P     ++++ G    G      E   EM
Sbjct: 477 TYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536

Query: 111 VLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           +  G+   D+V +  +I+  C  G VM A ++FD   D G  P V+ +  LI G C   K
Sbjct: 537 INKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGK 596

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M +A  +  +M   GV P++ TYN L+DGY K   +N  L  + EM    ++PN VT+G+
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           ++ GL + G   AA   F  M + G    + +Y  ++ G C+     EA+ L  ++    
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           +   +   N +I  +  V + E A+ L   +   G+L N  TY  +I    K+G +E A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ S M + G+ P     + +I    + G I  A    +++  K ++ +    + ++   
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 410 SKDGNMKETLRL 421
           S+ G  +E ++L
Sbjct: 837 SRKGKYQEDIKL 848



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 3/272 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F++LI  +  +G +++A  +   +EV+   P I   N LL+G  K G+ +     + EM
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  + VTYG+++      G  + A   F EMI+ G   TV IY I++ GLC  N  
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F+ +    V  ++   N +++   KV     A E +  +    L PN  T+GV+
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  L K G +  A N F  M K G+ P   + N +I    + G + +A +  S+++   I
Sbjct: 763 IINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             +  T ++++      G+ +    LL   Y+
Sbjct: 823 LLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQ 854



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 8/216 (3%)

Query: 351 VCSQMTEKGVE---PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           VC +  E G +   P   T++ L+D  C+A   D  + L+  ++   L  D +    L+ 
Sbjct: 143 VCRE--EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLK 200

Query: 408 GLSKDGNMKETLR-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            L      +E +  L   M E    P+  + S ++  L  N     AL+  L +     G
Sbjct: 201 CLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALD--LLQMMAKQG 258

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           G CSP+ V Y+ +I     +G+  KA  LF +M    ++PD  TY  ++  L +A+ M  
Sbjct: 259 GACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDK 318

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             ++L  M   G  PD V    M+ GY   G LK A
Sbjct: 319 AELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEA 354


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 233/479 (48%), Gaps = 42/479 (8%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQG 133
           ++  +P + +C  LL GL  + +     E    M      G   DVV+Y  +I+    +G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D  KA + + EM+D+ I P VV Y+ +I  LC    M +A  +  +M + GV+PN  TYN
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           +++ GYC       A+ F  +M    ++P+VVT+  LMD LCK G    A   F  M K 
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P+I  Y  L+ G+   G L E  +L   M +  I PD   +NILI       +++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +  KM + G+  NVVTY ++I   CK G ++ A+    QM ++G+ PN++ ++SLI  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C     D A  L  EM+ + +  + + F ++I    K+G + E+ +L+  M+   + P+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T S+LI G                                        C  G++ +A+
Sbjct: 511 VITYSTLIDG---------------------------------------YCLAGKMDEAT 531

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           KL S M S  ++PD  TY T++ G  R  RM D + L  +M+  G+ P+ +   ++++G
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 234/489 (47%), Gaps = 46/489 (9%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE------------ 151
           Y  M   G   +   V TYG+LI CCC  G +         ++ KG              
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 152 ------------------------PTVVIYTILIHGLCNENKMVEAESMFRSM---RECG 184
                                   P V   TIL+ GLC+EN+  EA  +   M   R  G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
             P++ +Y  +++G+ K  D ++A   YHEML   + P+VVT+  ++  LCK   +  A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M K GV PN   YN ++ G+C +    EA+    +M    + PDV TYN L+  L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G+   A  +   M K G+  ++ TY +L+ GY  +G + +  ++   M   G+ P+ 
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             F+ LI    K   +D AM ++++M    L P+VV + A+I  L K G++ + +  +++
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M++  +TP++   +SLIH L    +   A    LE  D+   G C  N + + +II + C
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR---GIC-LNTIFFNSIIHSHC 487

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+++++ KLF  M    ++P+  TY+T++ G   A +M +   LL+ M  +G+ PD V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 545 INQVMVRGY 553
               ++ GY
Sbjct: 548 TYNTLINGY 556



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 251/542 (46%), Gaps = 47/542 (8%)

Query: 52  PSVFSTLII--AFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKGKFDSV 103
           P VFS  I+     +    +EAL +       R     P + +   ++NG  K+G  D  
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           +  Y EM+   +  DVVTY  +I   C    + KA+ +   M+  G+ P  + Y  ++HG
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C+  +  EA    + MR  GV P++ TYN+LMD  CK      A + +  M    L+P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           + T+  L+ G    G L         M + G+ P+  V+N LI  + K   + EAM + S
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY----------- 332
           +M +  ++P+V TY  +I  LC  G ++ A    ++M  EG+  N++ Y           
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 333 ------------------------NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
                                   NS+I  +CKEG + ++  +   M   GV+PNV+T+S
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LIDG C AG +D A  L + M    + PD V +  LI+G  +   M + L L+KEM+ +
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            ++P++ T + ++ GLF   R + A   ++  T        S     Y  I+  LC +  
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST----YNIILHGLCKNNL 631

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
             +A ++F ++   +L+ +  T+  M+  LL+  R  +   L       G+VP+    ++
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 549 MV 550
           M 
Sbjct: 692 MA 693



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 263/562 (46%), Gaps = 26/562 (4%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           + +P V  +S++I A  +   +++A+ V     K  V+P     N++L+G     +    
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEA 285

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
             F ++M   G+  DVVTY  L+D  C  G   +A  +FD M  +G+EP +  Y  L+ G
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
              +  +VE  ++   M   G+ P+ + +N L+  Y K   V+ A+  + +M  H L PN
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+G ++  LCK G +  A  +F  M   G+ PNI VY  LI   C      +A  L  
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    I  +   +N +I   C  G++  +E L   M + G+  NV+TY++LIDGYC  G
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            M++A  + S M   G++P+ VT+++LI+G C+   +D A+ L+ EMV   + P+++ + 
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF------ 457
            ++ GL           LY  + ++     + T + ++HGL KN     AL  F      
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645

Query: 458 -LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
            L+   +T           +  +I AL   G+  +A  LF    S+ L P+  TY  M  
Sbjct: 646 DLQLETRT-----------FNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
            ++    + ++  L   M   G   D+ +   +VR   + G++  A      + E     
Sbjct: 695 NIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF-- 752

Query: 577 SETEGHTTRSFLGHLKPTVYKE 598
              E  T   F+  L    Y+E
Sbjct: 753 -SLEASTASLFIDLLSGGKYQE 773



 Score = 43.1 bits (100), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 422 YKEMLEA---KITPSVFTVSSLIHGLFKNGRIS---NALNFFLEKTDKTDGGYCSPNHVL 475
           Y  M  A   K+TP+V T   LI    + GR+     AL   ++K  + +        + 
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEA-------IT 124

Query: 476 YAAIIQALCYDGQILKASKL-FSDMRSDNLRPDNCTYTTMLRGLL---RAKRMLDVMMLL 531
           +  +++ LC D +   A  +    M   +  PD  + T +L+GL    R++  L+++ ++
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           AD    G  PD V    ++ G+ + GD   A+     + + RI
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 212/409 (51%), Gaps = 8/409 (1%)

Query: 48  PKFNPSVFS-----TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDS 102
           P+  PS  S       ++    +   E+A     +  V P I   N +++GL + G+   
Sbjct: 150 PRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRK 209

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCC---GQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
             +  +++   GL   V TY  LID  C   G G++     L  EM++ GI PT V + +
Sbjct: 210 AGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+G C  +    A  +F  M++ G+  ++ TYN+L+ G C    V   ++   EM    
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L PN +TFG ++ G CK G +  A ++   M +  V P++ +Y  LIDG+ + G + +AM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           ++   M K  ISP+V TYN LI G    G    A GLL +M ++GI A+VVTYN LI   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C +G++ KA+ +  +M+E G+EPN +T++++I G C  GNI +A  + T M       +V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           V +   I    + G M E   L  EML+  + P+  T  ++  G+ + G
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 186/335 (55%), Gaps = 7/335 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  + NAL+ G      V+ A + +   L   + P++ TF  ++ GLC++G+LR AG+ 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              +  +G+ P++  YN LIDG+CK   AGN++    L  EM +  ISP   T+ +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C       A  + ++M ++GI A+VVTYNSLI G C EG +E+ + +  +M + G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            +TF  ++ G CK G +  A      M  +++ PDVV++T LIDG  + G M++ + + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M +  I+P+V T + LI G  ++G   +A     E  +K        + V Y  +I AL
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG----IEADVVTYNVLIGAL 449

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           C  G++ KA KL  +M    L P++ TY T+++G 
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 196/409 (47%), Gaps = 7/409 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  + NALL GL+   + D   + +   +   +  D+ T+  +I   C  G + KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN---KMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             ++   G+ P+V  Y  LI G C +     M   + + + M E G+ P   T+  L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCK ++   A+  + EM    +  +VVT+  L+ GLC  G++         M   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              + C++ G CK G + +A      M +  + PDV  Y ILI G   +G++E A  + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M K+GI  NV TYN LI G+ + GD   A  +  +M EKG+E +VVT++ LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ L  EM    L P+ + +  +I G    GN+K    +   M + +   +V T +
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I    + G++  A +   E  DK       PN + Y  I + +   G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKC----LVPNGITYETIKEGMMEKG 558



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 181/380 (47%), Gaps = 12/380 (3%)

Query: 202 VADVNRALEFYHEML-----HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +A  ++ L  Y   L     H   +P+  +   L+ GL     +  A   F    +  V 
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGA 313
           P+I+ +N +I G C+ G L +A  +  +++ + ++P V TYN LI G C   G G +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + LL++M + GI    VT+  LI+GYCK  +   A+ V  +M ++G+  +VVT++SLI G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ++  + L  EM    L P+ + F  ++ G  K G M +       M E  + P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V   + LI G  + G++ +A+        K      SPN   Y  +I      G    AS
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKG----ISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M+   +  D  TY  ++  L     +   + LL +M ++G+ P+ +    +++G+
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 554 QENGDLKSAFRCSEFLKESR 573
            + G++KSA+     +++ R
Sbjct: 485 CDKGNIKSAYEIRTRMEKCR 504



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 7/286 (2%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P   + N L+ GL G  +++ AE   +   +  +  ++ T+N++I G C+ G + KA  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCK---AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
              +   G+ P+V T++SLIDG CK   AGN+     L  EMV   + P  V F  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K+ N    +R+++EM +  I  SV T +SLI GL   G++   +    E  D      
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG---- 329

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SPN + +  +++  C  G +  A+     M   N+ PD   YT ++ G  R  +M D M
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +   M K GI P+      ++ G+  +GD +SA    + +KE  I
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 7/252 (2%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           + N+L+ G      ++ A         + V P++ TF+++I G C+ G +  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 391 VIKSLVPDVVVFTALIDGLSKDG---NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
               L P V  + +LIDG  K G   NM     L KEM+EA I+P+  T   LI+G  KN
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
              + A+  F E   +      + + V Y ++I  LC +G++ +  KL  +M    L P+
Sbjct: 278 SNTAAAVRVFEEMKQQG----IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T+  +L+G  +   M D    +  M +  + PD VI  +++ GY+  G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 568 FLKESRIGSSET 579
            + +  I  + T
Sbjct: 394 AMAKKGISPNVT 405


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 8/459 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           + P V   + LI  F    +IE+A  V   +E    P + A NA+++G  K  + ++  +
Sbjct: 109 YTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQ 168

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
               M   G + D+VTY ++I   C +  +  AL + D+++     PTV+ YTILI    
Sbjct: 169 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATI 228

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  + EA  +   M   G++P++YTYNA++ G CK   V RA E    +     +P+V+
Sbjct: 229 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVI 288

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+      G+          M   G  PN   Y+ LI   C+ G + EA+S+   M
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 348

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + E++PD ++Y+ LI  LC  G+L+ A G++  M   G L ++V YN+++   CK G+ 
Sbjct: 349 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 408

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL + +++   G  PNV +++++I      G+   A+G+   M+ K + PD + + +L
Sbjct: 409 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSL 468

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L +DG ++E + L  +M ++   P+V + + ++ GL K  RI +A+  F E  +K  
Sbjct: 469 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG- 527

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              C PN   Y  +I+ + + G   +A +L + + S ++
Sbjct: 528 ---CRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 239/498 (47%), Gaps = 5/498 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLN   K GKF+    F E +V  G   DV+    LI       ++ KA  +  E+++  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            EP V  Y  +I G C  N++  A  +   M+  G +P++ TYN ++   C    +  AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               ++L  N  P V+T+ +L++     G +  A      M   G+ P+++ YN +I G 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A  L + +      PDV +YNIL++     G+ +  E L+ +M+  G   N 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY+ LI   C+ G +++A+SV   M EK + P+  ++  LI   CK G +D A+G+   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+    +PD+V +  ++  L K+GN  + L ++ ++      P+V + +++I  L+  G 
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
            S AL        K       P+ + Y ++I  LC DG + +A  L  DM     RP   
Sbjct: 443 RSRALGMVPAMISKG----IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           +Y  +L GL + +R+ D + + A+MI+ G  P+     +++ G    G    A   +  L
Sbjct: 499 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558

Query: 570 KESRIGSSETEGHTTRSF 587
               + S ++     ++F
Sbjct: 559 FSRDVISQDSFKRLNKTF 576



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 5/350 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A    G I EA+ +  ++    +LP +   NA++ G+ K+G  +   E 
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   G   DV++Y +L+     QG   +   L  EM  +G EP  V Y+ILI  LC 
Sbjct: 275 ITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA S+ + M E  + P+ Y+Y+ L+   CK   ++ A+     M+ +   P++V 
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++  LCK G    A   F  +   G  PN+  YN +I      G+   A+ +   M 
Sbjct: 395 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 454

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PD  TYN LI  LC  G +E A GLL  M + G    V++YN ++ G CK   ++
Sbjct: 455 SKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 514

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            A+ + ++M EKG  PN  T+  LI+G   AG    AM L   +  + ++
Sbjct: 515 DAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 245/517 (47%), Gaps = 11/517 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLV 116
           L+  F     IE  L   +  E++P  +A + +++     G      E Y  ++ +   V
Sbjct: 105 LLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCV 164

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            DV     L++     G V  A  ++DEM+D+  +       I+  GLC E K+ E   +
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
                  G VPN+  YN L+DGYCK  D+ RA   + E+      P V T+G +++  CK
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G+  A     V M + G+  ++ ++N +ID   K G   EA      M +    PD+ T
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMAT 344

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI G C  G++  AE LL+   + G+  N  +Y  LI  + K G+  +A  +  +M+
Sbjct: 345 YNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMS 404

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E+G   +++ + +L+ G   AG +D A+ +  +M+ + ++PD  ++  L+ GL K G   
Sbjct: 405 ERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFP 464

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---LEKTDKTDGGYCSPNH 473
              +L  EML+  +TP  F  ++L+ G  ++G +  A   F   +E+   T    C+   
Sbjct: 465 AAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECN--- 521

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
               A+I+  C  G +  A   F  M +    PD  TY+T++ G ++   +   + +   
Sbjct: 522 ----AMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGL 577

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           M+K    P+ V    ++ G+  NGDL  A +  E ++
Sbjct: 578 MLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 253/524 (48%), Gaps = 18/524 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI  + + G IE A  ++++++V   LP ++   A++N   KKGKF++V +  
Sbjct: 236 NIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLL 295

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GL   +  +  +ID     G  ++A +    MI+ G EP +  Y  LI+G C++
Sbjct: 296 VEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSK 355

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EAE +       G+ PN ++Y  L+  + K  +  RA E   EM       +++ +
Sbjct: 356 GKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAY 415

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+ GL   GE+  A      M + G+ P+  +YN L+ G CK G    A  L  EM  
Sbjct: 416 GALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLD 475

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++PD F    L+ G    G L+ A+ L Q   + GI  +VV  N++I GYCK G M  
Sbjct: 476 QNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMND 535

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL    +M      P+  T+S++IDG  K  ++  A+ ++  M+ K+  P+VV FT+LI+
Sbjct: 536 ALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLIN 595

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  ++G++    ++++EM      P+V T + LI    K G+++ A  FF    ++    
Sbjct: 596 GFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFF----EQMLIN 651

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASK-----------LFSDMRSDNLRPDNCTYTTMLR 516
            C PN   +  ++  L  +  I  +SK            F  M SD        Y ++L 
Sbjct: 652 KCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILL 711

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            L + K +   + L   M+  G  PD V    ++ G    G L+
Sbjct: 712 CLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQ 755



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 185/410 (45%), Gaps = 5/410 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVL 230
           E E++  +M+   ++P     + ++  Y     V  ALE Y+ ++  HN  P+V     L
Sbjct: 114 EIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSL 173

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ L   G++  A   +  M       + +    +  G CK G + E   L  +      
Sbjct: 174 LNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGC 233

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P++  YN LI G C  G +E A  L +++  +G L  V TY ++I+ +CK+G  E    
Sbjct: 234 VPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDK 293

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M E+G+  ++  F+ +ID + K G    A      M+     PD+  +  LI+G  
Sbjct: 294 LLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSC 353

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G ++E   L +  +   + P+ F+ + LIH   KNG    A    +E +++      +
Sbjct: 354 SKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGH----T 409

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
            + + Y A++  L   G++  A  +   M    + PD   Y  ++ GL +  R      L
Sbjct: 410 LDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
           L +M+   + PDA +N  +V G+  +G+L  A +  +   E  I +S  E
Sbjct: 470 LVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVE 519



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 20/325 (6%)

Query: 52  PSVF--STLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           P  F  +TL+  F   G+++EA     L + R I+   ++  CNA++ G  K G  +   
Sbjct: 480 PDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDT--SVVECNAMIKGYCKYGMMNDAL 537

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             ++ M       D  TY  +ID    Q D+  AL +F  M+ K  +P VV +T LI+G 
Sbjct: 538 LCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGF 597

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C    +  AE +F  MR  G  PN+ TY  L+  +CK   + +A  F+ +ML +   PN 
Sbjct: 598 CRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPND 657

Query: 225 VTFGVLMDGLCK-----VGELRAAGN------FFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            TF  L++GL       +   R+         FF  M   G    I  YN ++   C+  
Sbjct: 658 ATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHK 717

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            +  A+ L  +M      PD  ++  L+ GLC  G+L+    ++   + E  L   V Y+
Sbjct: 718 MVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYS 777

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEK 358
             +D +  EG    A  +   + EK
Sbjct: 778 EKLDQFLSEGLTSDASLLLQTLVEK 802


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 224/444 (50%), Gaps = 9/444 (2%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           + LI   S  G   EA  V       P + A NA++ G    G+ D+   +  E     +
Sbjct: 102 AALIKKLSASGRTAEARRVLAACG--PDVMAYNAMMAGYCGAGQVDAARRWCAER---AV 156

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
             D  T   LI   CG+G    AL + DEM+ +   P VV YTIL+   C  +   +A  
Sbjct: 157 ERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 216

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   MR+ G  P++ TYN +++G C+   V+ A+EF   +  +  +PN V++ +++ GLC
Sbjct: 217 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 276

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
                  A      M + G  PN+  +N LI   C+ G +  A+ +  ++ K+  SP+  
Sbjct: 277 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSL 336

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +YN L+   C   +++ A   L  M   G   ++V+YN+L+   C+ G+++ A+ +  Q+
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 396

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            +KG  P +++++++IDG  KAG    A+ L  EMV K L PD++ ++ +  GL ++  +
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++ +R + ++ +  I P+    +++I GL K     +A++ F        G  C PN   
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI----GNGCMPNEST 512

Query: 476 YAAIIQALCYDGQILKASKLFSDM 499
           Y  +I+ L Y+G I +A  L  ++
Sbjct: 513 YTILIEGLAYEGLIKEARDLLDEL 536



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 226/453 (49%), Gaps = 13/453 (2%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G ++EAL +       P    C AL+  L   G+     E    +  CG   DV+ Y  +
Sbjct: 81  GELDEALRLVGSAR-RPDAGTCAALIKKLSASGR---TAEARRVLAACG--PDVMAYNAM 134

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           +   CG G V  A     E   + +E        LI GLC   +   A ++   M     
Sbjct: 135 MAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRC 191

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           VP++ TY  L++  CK +   +A++   EM      P++VT+ V+++G+C+ G +  A  
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 251

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           F  ++  +G  PN   YN ++ G C A    +A  L  EM +    P+V T+N+LI  LC
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 311

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  +L+++ K G   N ++YN L+  +CK+  M+KA++    M  +G  P++V
Sbjct: 312 RKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 371

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           ++++L+   C++G +D A+ L  ++  K   P ++ +  +IDGL+K G  KE L L  EM
Sbjct: 372 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   + P + T S++  GL +  RI +A+  F +  D        PN VLY AII  LC 
Sbjct: 432 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG----IRPNTVLYNAIILGLCK 487

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             +   A  LF+ M  +   P+  TYT ++ GL
Sbjct: 488 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 216/472 (45%), Gaps = 16/472 (3%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L  L+++G+ D        +V      D  T   LI      G   +A  +         
Sbjct: 74  LRSLVRRGELDEALR----LVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 124

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P V+ Y  ++ G C   ++  A    R   E  V  + YT + L+ G C       AL 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              EML     P+VVT+ +L++  CK    + A      M   G  P+I  YN +++G C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G + +A+     +  +   P+  +YNI++KGLC   + E AE L+ +M ++G   NVV
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+N LI   C++G +E AL V  Q+ + G  PN ++++ L+   CK   +D AM     M
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           V +   PD+V +  L+  L + G +   + L  ++ +    P + + +++I GL K G+ 
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             AL    E   K       P+ + Y+ I   LC + +I  A + F  ++   +RP+   
Sbjct: 422 KEALELLNEMVSKG----LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 477

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y  ++ GL + +     + L A MI  G +P+     +++ G    G +K A
Sbjct: 478 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 7/343 (2%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V+ +  +M G C  G++ AA  +    A   V  + +  + LI G C  G    A+++
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERA---VERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM +    PDV TY IL++  C     + A  LL +M  +G   ++VTYN +++G C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG ++ A+     +   G EPN V+++ ++ G C A   + A  L  EM  K   P+VV 
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F  LI  L + G ++  L + +++ +   +P+  + + L+H   K  ++  A+ F     
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL---- 358

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           D      C P+ V Y  ++ ALC  G++  A +L   ++     P   +Y T++ GL +A
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            +  + + LL +M+  G+ PD +    +  G      ++ A R
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 149/311 (47%), Gaps = 3/311 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ ++    + G +++A+   + +      P   + N +L GL    +++   E   EM
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +VVT+ +LI   C +G V  AL + +++   G  P  + Y  L+H  C + KM
Sbjct: 292 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A +    M   G  P++ +YN L+   C+  +V+ A+E  H++      P ++++  +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G+ + A      M   G+ P+I  Y+ +  G C+   + +A+    +++   I
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+   YN +I GLC   +   A  L   M   G + N  TY  LI+G   EG +++A  
Sbjct: 472 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 531

Query: 351 VCSQMTEKGVE 361
           +  ++  +G E
Sbjct: 532 LLDELCSRGEE 542



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 7/280 (2%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PDV  YN ++ G CG GQ++ A    +   +  +  +  T ++LI G C  G    AL+V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  +   P+VVT++ L++  CK      AM L  EM  K   PD+V +  +++G+ +
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G + + +   K +      P+  + + ++ GL    R  +A     E   K     C P
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG----CPP 298

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V +  +I  LC  G +  A ++   +      P++ +Y  +L    + K+M   M  L
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             M+  G  PD V    ++     +G++  A      LK+
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +      P +  +ST+         IE+A+  + K++   + P     NA++ GL K
Sbjct: 428 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 487

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           + +  S  + +  M+  G + +  TY +LI+    +G + +A +L DE+  +G E  + +
Sbjct: 488 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDV 547

Query: 157 YTI 159
           + I
Sbjct: 548 HLI 550


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 240/498 (48%), Gaps = 5/498 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLN   K GKF+    F E +V  G   DV+    LI       ++ KA  +  E+++  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            EP V  Y  +I G C  N++  A  +   M+  G +P++ TYN ++   C    +  AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +   ++L  N  P V+T+ +L++     G +  A      M   G+ P+++ YN +I G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A  L + +      PDV +YNIL++     G+ +  E L+ +M+  G   N 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTY+ LI   C+ G +++A+SV   M EK + P+  ++  LI   CK G +D A+G+   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+    +PD+V +  ++  L K+GN  + L ++ ++      P+V + +++I  L+  G 
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
            S AL        K       P+ + Y ++I  LC DG + +A  L  DM     RP   
Sbjct: 433 RSRALGMVPAMISKG----VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           +Y  +L GL + +R+ D + + A+MI+ G  P+     +++ G    G    A   +  L
Sbjct: 489 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548

Query: 570 KESRIGSSETEGHTTRSF 587
               + S ++     ++F
Sbjct: 549 FSRDVISQDSFKRLNKTF 566



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 238/459 (51%), Gaps = 8/459 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           + P V   + LI  F    +IE+A  V   +E    P + A NA+++G  K  + ++  +
Sbjct: 99  YTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQ 158

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
               M   G + D+VTY ++I   C +  +  AL + D+++     PTV+ YTILI    
Sbjct: 159 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATI 218

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  + EA  +   M   G++P++YTYNA++ G CK   V RA E    +     +P+V+
Sbjct: 219 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVI 278

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+      G+          M   G  PN   Y+ LI   C+ G + EA+S+   M
Sbjct: 279 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 338

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + E++PD ++Y+ LI  LC  G+L+ A G++  M   G L ++V YN+++   CK G+ 
Sbjct: 339 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 398

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +AL + +++   G  PNV +++++I      G+   A+G+   M+ K + PD + + +L
Sbjct: 399 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L +DG ++E + L  +M ++   P+V + + ++ GL K  RI +A+  F E  +K  
Sbjct: 459 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG- 517

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              C PN   Y  +I+ + + G   +A +L + + S ++
Sbjct: 518 ---CRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 5/350 (1%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A    G I EA+ +  ++    +LP +   NA++ G+ K+G  +   E 
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   G   DV++Y +L+     QG   +   L  EM  +G EP  V Y+ILI  LC 
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EA S+ + M E  + P+ Y+Y+ L+   CK   ++ A+     M+ +   P++V 
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++  LCK G    A   F  +   G  PN+  YN +I      G+   A+ +   M 
Sbjct: 385 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 444

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + PD  TYN LI  LC  G +E A GLL  M + G    V++YN ++ G CK   ++
Sbjct: 445 SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 504

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            A+ + ++M EKG  PN  T+  LI+G   AG    AM L   +  + ++
Sbjct: 505 DAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 250/500 (50%), Gaps = 5/500 (1%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           EM   E  L       + P  +  N+L+ G    G +      ++EM   GL+  VV   
Sbjct: 207 EMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCN 266

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
             I   C    + +A ++FD M+ KG +P ++ Y+ L+HG   E       S+   M   
Sbjct: 267 SFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSK 326

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+VPN   +N L++ Y +   +++A+  + +M +  + P+ VTF  ++  LC++G L  A
Sbjct: 327 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 386

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-NILIK 302
            + F HM   GV P+  VY CLI G C  G L +A  L SEM   +I P    Y + +I 
Sbjct: 387 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 446

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            L   G++   + ++  M + G   NVVT+NSL++GYC  G+ME+A ++   M   G+EP
Sbjct: 447 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 506

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N   + +L+DG CK G ID A+ ++ +M+ K + P  V++  ++ GL +        +++
Sbjct: 507 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMF 566

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            EM+E+  T S+ T   ++ GL +N     A N  LEK    +  +   + + +  +I A
Sbjct: 567 HEMIESGTTVSIQTYGVVLGGLCRNNCTDEA-NMLLEKLFAMNVKF---DIITFNIVISA 622

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +   G+  +A +LF+ + +  L P   TY  M+  L++ +   +   L   + K G  PD
Sbjct: 623 MLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682

Query: 543 AVINQVMVRGYQENGDLKSA 562
           + +   +VR   +  ++  A
Sbjct: 683 SRLLNHIVRMLLKKAEVAKA 702



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 220/458 (48%), Gaps = 5/458 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++   +  + +     +  ++  GL  DV +Y  LID    +G+V KA  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F +MI++ + P VV Y  LI GLC   +MV++E +   M + G+ PN  TYN+L+ GY  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 ++  + EM    L P VV     +  LC+   ++ A + F  M   G  PNI  
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ L+ G+   G      SL + M    I P+   +NILI      G ++ A  + + M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G++ + VT+ ++I   C+ G ++ AL   + M + GV P+   +  LI G C  G + 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 382 AAMGLYTEMVIKSLVPD-VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            A  L +EM+ K + P  V  F+++I+ L K+G + E   +   M++    P+V T +SL
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + G    G +  A        D        PN  +Y  ++   C +G+I  A  +F DM 
Sbjct: 480 MEGYCLVGNMEEAFALL----DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
              ++P +  Y  +L GL +A+R      +  +MI+ G
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           PT+  Y ILI      ++   A ++F  +   G+ P++ +YN L+DG+ K  +V++A E 
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           +++M+  ++ P+VVT+  L+DGLCK  E+  +      M   G+ PN   YN LI G+  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG   E++ +  EM    + P V   N  I  LC   +++ A+ +   M  +G   N+++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y++L+ GY  EG      S+ + M  KG+ PN   F+ LI+   + G +D AM ++ +M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            K ++PD V F  +I  L + G + + L  +  M++  + PS      LI G   +G + 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A     E  +K       P    +++II  L  +G++ +   +   M     RP+  T+
Sbjct: 420 KAKELISEMMNKD---IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTF 476

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +++ G      M +   LL  M  +GI P+  I   +V GY +NG +  A 
Sbjct: 477 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 203/417 (48%), Gaps = 4/417 (0%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMG---HIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFD 101
           L+ PK N   +STL+  ++  G   ++   + +     ++P  +  N L+N   + G  D
Sbjct: 290 LKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMD 349

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                +E+M   G++ D VT+  +I   C  G +  AL+ F+ M+D G+ P+  +Y  LI
Sbjct: 350 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLI 409

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTY-NALMDGYCKVADVNRALEFYHEMLHHNL 220
            G CN  ++V+A+ +   M    + P    Y +++++   K   V    +    M+    
Sbjct: 410 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQ 469

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           +PNVVTF  LM+G C VG +  A      MA  G+ PN ++Y  L+DG+CK G + +A++
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 529

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           +  +M    + P    YNI++ GL    +   A+ +  +M + G   ++ TY  ++ G C
Sbjct: 530 VFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC 589

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           +    ++A  +  ++    V+ +++TF+ +I    K G    A  L+  +    LVP V 
Sbjct: 590 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVH 649

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            +  +I  L K+ + +E   L+  + ++   P    ++ ++  L K   ++ A N+ 
Sbjct: 650 TYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYL 706



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 213/452 (47%), Gaps = 21/452 (4%)

Query: 19  KDVTENL-LKSRKPHHVCYSVF-------------NALNSLEIPK---FNPSVFSTLIIA 61
           KD+ +++ LK  KP+ + YS               N+L +L + K    N   F+ LI A
Sbjct: 282 KDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINA 341

Query: 62  FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           ++  G +++A+ ++  ++   ++P       +++ L + G+ D     +  MV  G+   
Sbjct: 342 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 401

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY-TILIHGLCNENKMVEAESMF 177
              Y  LI  CC  G+++KA  L  EM++K I P  V Y + +I+ L  E ++ E + + 
Sbjct: 402 EAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIM 461

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M + G  PN+ T+N+LM+GYC V ++  A      M    ++PN   +G L+DG CK 
Sbjct: 462 DLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 521

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +  A   F  M   GV P   +YN ++ G  +A     A  +  EM +   +  + TY
Sbjct: 522 GRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTY 581

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            +++ GLC     + A  LL+K++   +  +++T+N +I    K G  ++A  + + ++ 
Sbjct: 582 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIST 641

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G+ P V T++ +I    K  + + A  L+  +      PD  +   ++  L K   + +
Sbjct: 642 YGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAK 701

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
                  + E  +T    T+S L     + G+
Sbjct: 702 ASNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 31/327 (9%)

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           DG   A  LF+ M   +       +P ++TYNILI     + + E A  +  ++ + G+ 
Sbjct: 95  DGPALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLG 154

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +V +YN+LIDG+ KEG+++KA  +  +M E+ V P+VVT++SLIDG CK   +  +  +
Sbjct: 155 PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERV 214

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +MV   + P+   + +LI G S  G  KE++R++KEM  + + P V   +S IH L +
Sbjct: 215 LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCR 274

Query: 447 NGRISNALNFF---LEKTDKTD--------GGYCS--------------------PNHVL 475
           + RI  A + F   + K  K +         GY +                    PNH  
Sbjct: 275 HNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF 334

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           +  +I A    G + KA  +F DM++  + PD  T+ T++  L R  R+ D +     M+
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSA 562
            +G+ P   + + +++G   +G+L  A
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKA 421


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 226/462 (48%), Gaps = 9/462 (1%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L GL++KG      +  E     G V + V Y VLID  C +GDV + + L  EM  KG+
Sbjct: 271 LEGLVEKG-----LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGL 325

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            PTVV Y  L+  L  +  + +  S+   MRE  + PN+  YN+++D  CK    ++AL 
Sbjct: 326 LPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALV 385

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              +M      P+ +TF  L+ GLC+ G ++ A        ++ + PN+  Y  LI G C
Sbjct: 386 VLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFC 445

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G +  A +L  EM +   +PDV T+  LI GL   GQ+  A  + +KM    +L +  
Sbjct: 446 VRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDAN 505

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            YN LI G CK+  +  A ++  +M E+ V P+   +++LIDG  +  ++D A  ++  M
Sbjct: 506 IYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFM 565

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K + PDVV + A+I G  + G M E +     M +    P  FT ++LI G  K G I
Sbjct: 566 EQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           S AL+   +   +     C PN V Y+++I   C  G    A  LF  M S  L P+  T
Sbjct: 626 SGALSLLCDMMKRR----CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVIT 681

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           YT ++  L +  +++   M    M+     P+      +V G
Sbjct: 682 YTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG 723



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 246/533 (46%), Gaps = 51/533 (9%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY---GVLIDCCCGQGDVMKAL----- 139
           +ALL  L + G+FD+V     +M L G  A V T    G L+      G   KA      
Sbjct: 154 SALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQR 213

Query: 140 -------------------------------NLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
                                           L+DEM+ +          +++ GLC E 
Sbjct: 214 AREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEG 273

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + +   +  +    G VPN   YN L+DGYC+  DV R +    EM    L P VVT+G
Sbjct: 274 LVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            LM  L + G+L    +    M +  + PN+ +YN +ID  CK  +  +A+ +  +M   
Sbjct: 334 TLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAG 393

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD  T++ LI GLC  G+++ AE LL++  +  +  N+ +Y SLI G+C  G++  A
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
            ++  +M E+G  P+VVTF +LI G   AG +  A+ +  +M  + L+PD  ++  LI G
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L K   +     L +EMLE  + P  +  ++LI G  +N  +  A   F     K     
Sbjct: 514 LCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG---- 569

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V Y A+I+  C  G + +A +  S MR     PD  TYTT++ G  +   +   +
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
            LL DM+K    P+ V    ++ GY + GD  +A        E   GS E++G
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA--------ECLFGSMESQG 674



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 240/493 (48%), Gaps = 16/493 (3%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
           L  +E     P+V  + TL+      G +E+    L   R+  + P +Q  N++++ L K
Sbjct: 317 LGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCK 376

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
                      ++M   G   D +T+  LI   C +G V +A  L  E     + P +  
Sbjct: 377 CRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSS 436

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT LIHG C   +++ A ++   M E G  P++ T+ AL+ G      V+ AL    +M 
Sbjct: 437 YTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMA 496

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              L P+   + VL+ GLCK   L AA N    M +  V P+ +VY  LIDG  +  +L 
Sbjct: 497 ARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLD 556

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA  +   ME+  I PDV  YN +IKG C  G +  A   +  M K G + +  TY +LI
Sbjct: 557 EARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLI 616

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            GY K+G++  ALS+   M ++  +PNVV +SSLI+G CK G+ DAA  L+  M  + L 
Sbjct: 617 GGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLF 676

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL------FKNGRI 450
           P+V+ +T LI  L K   +      ++ ML  + +P+ +T+ SL+ GL        +   
Sbjct: 677 PNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHC 736

Query: 451 SNALNF-----FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           S+ +N       L+         C P +  Y AII +LC    + +A  L + M +   +
Sbjct: 737 SSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYK 796

Query: 506 PDNCTYTTMLRGL 518
           PD+ T+ ++L G 
Sbjct: 797 PDSATFLSLLYGF 809



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 243/521 (46%), Gaps = 22/521 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI  +   G +   + +  ++E   +LP +     L++ L +KG  + +    
Sbjct: 293 NAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLL 352

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM    L  +V  Y  +ID  C      +AL +  +M   G +P  + ++ LI GLC E
Sbjct: 353 SEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQE 412

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EAE + R      + PNL +Y +L+ G+C   +V  A     EM+     P+VVTF
Sbjct: 413 GRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTF 472

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G L+ GL   G++  A      MA   + P+  +YN LI G CK   L  A +L  EM +
Sbjct: 473 GALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLE 532

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD + Y  LI G      L+ A  + + M ++GI  +VV YN++I GYC+ G M +
Sbjct: 533 QNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNE 592

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+   S M + G  P+  T+++LI G  K GNI  A+ L  +M+ +   P+VV +++LI+
Sbjct: 593 AVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLIN 652

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K G+      L+  M    + P+V T + LI  LFK  ++  A  +F    +     
Sbjct: 653 GYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYF----EYMLLN 708

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASK---------------LFSDMRSDNLRPDNCTYT 512
            CSPN     +++  LC     + +S                +F  + +D   P N  Y 
Sbjct: 709 QCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYN 768

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            ++  L     + + + L   M   G  PD+     ++ G+
Sbjct: 769 AIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGF 809



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 157/343 (45%), Gaps = 18/343 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F  LI      G + EAL V  K+   ++LP     N L++GL KK    +     EEM
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +  D   Y  LID       + +A  +F+ M  KGI P VV Y  +I G C    M
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA     +MR+ G +P+ +TY  L+ GY K  +++ AL    +M+    QPNVV +  L
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++G CK+G+  AA   F  M   G+FPN+  Y  LI    K   +  A      M   + 
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 291 SPDVFTYNILIKGLC------------GVGQLEGAEGLL---QKMYKEGILANVVTYNSL 335
           SP+ +T + L+ GLC                L G   LL   + +  +        YN++
Sbjct: 711 SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAI 770

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           I   C    + +AL + ++M  KG +P+  TF SL+ G C  G
Sbjct: 771 IFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVG 813



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 18/304 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TLI  F     ++EA  ++  +E   + P +   NA++ G  + G  +   E    M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G + D  TY  LI     QG++  AL+L  +M+ +  +P VV Y+ LI+G C     
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE +F SM   G+ PN+ TY  L+    K   V RA  ++  ML +   PN  T   L
Sbjct: 661 DAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSL 720

Query: 231 MDGLCK--VGELRAAGNFFVHMAKFGVFPNIF-------------VYNCLIDGHCKAGNL 275
           + GLC      + +  +  V++   G   +IF              YN +I   C    L
Sbjct: 721 VTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNML 780

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA+ L ++M      PD  T+  L+ G C VG+      +L   ++   L     Y  L
Sbjct: 781 GEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKIL 840

Query: 336 IDGY 339
            D Y
Sbjct: 841 FDQY 844


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 224/489 (45%), Gaps = 8/489 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP ++  N LL  L +   F  +      M       ++ TY  LI+  C  GD+  A  
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
               ++  G+ P    YT  + G C    +  A  +F  M   G +   +TY AL+ G  
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               V  A+  +  M   +  P+   +  ++ GLC+ G    A          G  PNI 
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           VYN LIDG+C AG +  A+ +   M+    SP+V TY  LI GLC  G++E A  L  +M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G+  NVVTY +LI G C EG ++ A  +   M   G+ PN  TFS LID  CK   +
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A      +V K +  + VV+T+LIDGL K G +     L ++M+     P   + SSL
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL +  ++S A     +  +K  G   SP  V Y  II  L  +       K+F  M 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEK--GIQASP--VTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  + PD  TYT  +R      RM D   ++  M+  G+ P+ V    ++RGY   G + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 561 SAFRCSEFL 569
            AF   E +
Sbjct: 510 QAFSTFEVM 518



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 235/486 (48%), Gaps = 9/486 (1%)

Query: 36  YSVFNALNSL--EIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNAL 90
           + +F  + SL   +P  N   ++TLI A+   G I  A   L       + P   A  + 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  + G        +  M L G +    TY  L+    G G V +A+ +F  M     
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSC 173

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P   +Y  ++HGLC   +  EAE +       G  PN+  YNAL+DGYC   ++  AL+
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  M  +   PNV T+  L+ GLCK G++  A   F  M + G+ PN+  Y  LI G C
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G+L  A  L   ME   + P+ +T+++LI  LC   ++E A+  L  + K+G+  N V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y SLIDG CK G ++ A  +  +M  +G  P+  ++SSLIDG C+   +  A  +  +M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + K +    V +T +ID L ++   +   +++ +M+   I P + T +  +    + GR+
Sbjct: 414 MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A +  ++  D+  G +  PN V Y  +I+     G + +A   F  M     +P+  +
Sbjct: 474 EDAESMIVQMVDR--GVF--PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 511 YTTMLR 516
           YT +LR
Sbjct: 530 YTVLLR 535



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 225/476 (47%), Gaps = 17/476 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+      G + EA+ V+   R     P       +++GL + G+ +      EE 
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   ++V Y  LID  C  G++  AL +F+ M      P V  YT LIHGLC   K+
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A  +F  M E G+ PN+ TY AL+ G C    +  A    H M  + L PN  TF VL
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D LCK  ++  A  F   + K GV  N  VY  LIDG CK G +  A  L  +M     
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  +Y+ LI GLC   +L  A  +L+ M ++GI A+ VTY  +ID   +E   E    
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +  +M   G+ P++VT++  +   C+ G ++ A  +  +MV + + P++V +  LI G +
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-----------LE 459
             G + +    ++ M+     P+  + + L+  + K     N+++ +           LE
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
              +      +    +Y+  I+ LC   ++ +A   F  M++ NL P    YT+++
Sbjct: 564 DITERQLPLAAD---IYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 177/408 (43%), Gaps = 82/408 (20%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   NAL++G    G+ +   + +E M       +V TY  LI   C  G V +A+ L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M++ G+EP VV YT LI G CNE  +  A  +   M   G+VPN +T++ L+D  CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V  A  F   ++   ++ N V +  L+DGLCK G++ AA      M   G  P+   
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEM-EK----------------------------FE--- 289
           Y+ LIDG C+   L +A  +  +M EK                            F+   
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 290 ---ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I+PD+ TY + ++  C  G++E AE ++ +M   G+  N+VTYN+LI GY   G + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLI----------------------DGQ---------- 374
           +A S    M  KG +PN  +++ L+                      D Q          
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQ 569

Query: 375 ---------------CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
                          C+   ++ A   +  M   +L P   V+T++ID
Sbjct: 570 LPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 168/355 (47%), Gaps = 4/355 (1%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N+ T+  L++  C  G++ AA      +   G+ P+ + Y   + G+C+AG L  A  + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M         FTY  L+ GL G G +  A  +   M  +    +   Y +++ G C+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G  E+A  +  +    G EPN+V +++LIDG C AG ++ A+ ++  M      P+V  +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LI GL K G ++  + L+  M+EA + P+V T ++LI G    G +  A  F L    
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCA--FRLLHLM 308

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +T+G    PN   ++ +I ALC   ++ +A      +    ++ +   YT+++ GL +  
Sbjct: 309 ETNG--LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           ++     L+  MI  G VPDA     ++ G      L  A    E + E  I +S
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 17/165 (10%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            NP +  ++  + ++ E G +E+A  +  ++    V P +   N L+ G    G     +
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQG------DVMKALN------LFDEMIDKGIEP 152
             +E MV  G   +  +Y VL+     +       D+ K  +      L +++ ++ +  
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPL 572

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
              IY+  I  LC  +++ EA+  F  M+   + P+   Y +++D
Sbjct: 573 AADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 254/505 (50%), Gaps = 31/505 (6%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G  + A  + R++   P  +AC+ LL+ L                     V D V+Y ++
Sbjct: 43  GRADAAALLNRRLRAAPVTEACS-LLSALPD-------------------VRDAVSYNIV 82

Query: 126 IDCCCGQG-DVMKALNLFDEMIDKG---IEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +   C +G D+ +AL+L  +M  +      P  V YT+++ GLC   +  EA ++ RSM+
Sbjct: 83  LAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQ 142

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             GV  ++ TY  L+ G C  A+++ ALE   EM    + PNV+ +  L+ G C+ G  +
Sbjct: 143 ASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQ 202

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                F  M++ GV P++ ++   ID  CK G + +A+ +   M +  + P+V TYN+LI
Sbjct: 203 DVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLI 262

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-- 359
             LC  G +  A  L  +M  +G+  +VVTYN+LI G     +M+ A+ +  +M +    
Sbjct: 263 NCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTL 322

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           VEP+VVTF+S+I G CK G +  A+ +   M  +  + ++V +  LI G  +   +   +
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L  E++ + + P  FT S LI+G  K   +  A  F    T +  G      H  Y  +
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQR--GIRAELFH--YIPL 438

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           + ALC  G + +A  LF++M   N   D   Y+TM+ G  ++  +     LL DM+  G+
Sbjct: 439 LAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGL 497

Query: 540 VPDAVINQVMVRGYQENGDLKSAFR 564
            PDAV   +++  + + GDL+ A R
Sbjct: 498 APDAVTYSILINMFAKLGDLEEAER 522



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 249/473 (52%), Gaps = 22/473 (4%)

Query: 12  KNARCLIKDVTENLLKSRKPHHVCYSVF--------------NALNSLEIPKFNPSV--F 55
           + A  L+ D++     + +P+ V Y++                 L S++       V  +
Sbjct: 94  RQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTY 153

Query: 56  STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
            TLI    +   ++ AL +  ++    V P +   + LL G  + G++  V + +EEM  
Sbjct: 154 GTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSR 213

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            G+  DV+ +   ID  C +G + KA+ + D M+ +G+EP VV Y +LI+ LC E  + E
Sbjct: 214 LGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVRE 273

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVL 230
           A ++   M + GV P++ TYN L+ G   V +++ A+    EM+  +  ++P+VVTF  +
Sbjct: 274 ALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSV 333

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GLCK+G +R A +    MA+ G   N+  YN LI G  +   +  AM+L SE+    +
Sbjct: 334 IHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGL 393

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD FTY+ILI G   + +++ AE  L+ M + GI A +  Y  L+   C+ G ME+A+ 
Sbjct: 394 EPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMV 453

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + ++M +     + V +S+++ G CK+G+I AA  L  +M+ + L PD V ++ LI+  +
Sbjct: 454 LFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFA 512

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           K G+++E  R+ K+M  +   P V    SLI G    G+I+  L+   E   K
Sbjct: 513 KLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 41/388 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N  V+S L+  +   G  ++   V+ ++  L   P +      ++ L KKG+     +  
Sbjct: 184 NVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVK 243

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI------ 161
           + MV  GL  +VVTY VLI+C C +G V +AL L +EM DKG+ P VV Y  LI      
Sbjct: 244 DIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGV 303

Query: 162 -------------------------------HGLCNENKMVEAESMFRSMRECGVVPNLY 190
                                          HGLC   +M +A S+   M E G + NL 
Sbjct: 304 LEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLV 363

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TYN L+ G+ +V  VN A+    E++   L+P+  T+ +L++G  K+ E+  A  F   M
Sbjct: 364 TYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM 423

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            + G+   +F Y  L+   C+ G + +AM L +EM+      D   Y+ ++ G C  G +
Sbjct: 424 TQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDI 482

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A+ LLQ M  EG+  + VTY+ LI+ + K GD+E+A  V  QM   G  P+V  F SL
Sbjct: 483 KAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSL 542

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           I G    G I+  + L  EM  K++  D
Sbjct: 543 IKGYSAEGQINKILDLIHEMRAKNVAID 570


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 233/474 (49%), Gaps = 8/474 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+ GL K+G+        +EM L G+V  V TY  +ID  C  G +  AL +   M   G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P    Y  LI+GLC   K+ EAE +       G  P + T+  L++GYCK   ++ AL
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+  N + ++  +GVL++ L K   L+ A      M   G+ PN+  Y  +IDG+
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGY 468

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A+ +   ME     P+ +TY  LI GL    +L  A  L+ KM ++GI   V
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TY +LI G CK+ + + A  +   M + G+ P+   ++ L D  CK+G  + A   Y+ 
Sbjct: 529 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSF 585

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +V K +V   V +T+L+DG SK GN      L ++M+       ++T S L+  L K  +
Sbjct: 586 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           ++ AL+   + T    G  C  N V Y  II  +  +G+   A  LF++M S   +P   
Sbjct: 646 LNEALSILDQMT--VSGVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSAT 701

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TYT  +    +  R+ +   L+ +M + G+ PD V   + + G    G +  AF
Sbjct: 702 TYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAF 755



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 245/540 (45%), Gaps = 24/540 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPA-----IQACNALLNGL 94
           LN      F P+V  F+ LI  + +   I++AL V  K  ++ +     +QA   L+N L
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRV--KSNMISSNCKLDLQAYGVLINVL 433

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           IKK +     E   EM   GL  +VVTY  +ID  C  G V  AL +F  M  +G  P  
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  LI+GL  + K+ +A ++   M+E G+ P + TY  L+ G CK  + + A   +  
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  + L P+   + VL D LCK G    A +F V   + GV      Y  L+DG  KAGN
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGN 610

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A  L  +M       D++TY++L++ LC   +L  A  +L +M   G+  N+V Y  
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I    KEG  + A S+ ++M   G +P+  T++  I   CK G I+ A  L  EM    
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN-- 452
           + PDVV +   I+G    G +       K M++A   P+ +T   L+    K   I+   
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHY 790

Query: 453 ----------ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
                      LN   +  ++      +P  V Y++II   C   ++ +A  L   M   
Sbjct: 791 VDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++ P+   YT +++     K     +  + DMI+ G  P       ++ G  + GD   A
Sbjct: 851 DISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRA 910



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 230/471 (48%), Gaps = 8/471 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L++    + + + Y  +V  GL+ D VTY  +I   C +G +  A   F  + +
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRE 207

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G++        L+ G C  + + +A  +   M   G   N Y+Y  L+ G C+   V  
Sbjct: 208 SGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVRE 267

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL     M+H     N+ T+ +L+ GLCK G +  A      M   GV P+++ YN +ID
Sbjct: 268 ALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMID 327

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK+G + +A+ + + ME+   +PD +TYN LI GLCG G+L+ AE LL      G   
Sbjct: 328 GYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTP 386

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V+T+ +LI+GYCK   ++ AL V S M     + ++  +  LI+   K   +  A    
Sbjct: 387 TVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL 446

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    L P+VV +T++IDG  K G +   L ++K M      P+ +T  SLI+GL ++
Sbjct: 447 NEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            ++  A+    +  +  DG   +P  + Y  +IQ  C   +   A +LF  M  + L PD
Sbjct: 507 KKLHKAMALITKMQE--DG--ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 562

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
              Y  +   L ++ R  +    L   ++ G+V   V    +V G+ + G+
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGN 610



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 223/457 (48%), Gaps = 8/457 (1%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVV---IYTILIHGLCNENKMVEAESMFRSMR 181
           +I C     DV +A++    +   G +  V+    Y + +  L   +       ++  + 
Sbjct: 112 MISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLV 171

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G++P+  TYN ++  YCK   +  A  ++  +    +Q +  T   L+ G C+  +LR
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    + M   G   N + Y  LI G C+A  + EA+ L   M     S ++ TY +LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLI 291

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           KGLC  G++  A GLL +M   G++ +V TYN++IDGYCK G M+ AL + + M + G  
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCN 351

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+  T++SLI G C  G +D A  L    + +   P V+ FT LI+G  K   + + LR+
Sbjct: 352 PDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
              M+ +     +     LI+ L K  R+  A     E  ++      +PN V Y +II 
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEA----KETLNEMFANGLAPNVVTYTSIID 466

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G +  A ++F  M  +   P+  TY +++ GL++ K++   M L+  M + GI P
Sbjct: 467 GYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
             +    +++G  +  +  +AFR  E ++++ +   E
Sbjct: 527 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 229/514 (44%), Gaps = 28/514 (5%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
           LN +      P+V  ++++I  + ++G +  AL V++ +E     P      +L+ GLI+
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K         +M   G+   V+TY  LI   C + +   A  LF+ M   G+ P    
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y +L   LC   +  EA S    +R+ GVV    TY +L+DG+ K  + + A     +M+
Sbjct: 566 YNVLTDALCKSGRAEEAYSFL--VRK-GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
           +   + ++ T+ VL+  LCK  +L  A +    M   GV  NI  Y  +I    K G   
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHD 682

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A SL +EM      P   TY + I   C +G++E AE L+ +M ++G+  +VVTYN  I
Sbjct: 683 HAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFI 742

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA-------------- 382
           +G    G +++A S   +M +   EPN  T+  L+    K   I+A              
Sbjct: 743 NGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIEL 802

Query: 383 --AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
                L   M+   L P VV ++++I G  K   ++E   L   ML   I+P+    + L
Sbjct: 803 NMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTML 862

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I           A++F    TD  + G+  P    Y  +I  LC +G   +A  LF D+ 
Sbjct: 863 IKCCCDIKLFGKAVSFV---TDMIEFGF-QPQLESYHYLIVGLCDEGDYDRAKSLFCDLL 918

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
             +   +   +  +  GLL+A  +     LLA M
Sbjct: 919 GMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 28/391 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNA-------LLNGLIKKGKFDSVWEF 106
            +++L+  FS+ G+ + A  +  K+      + C A       LL  L K+ K +     
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKM----VNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            ++M + G+  ++V Y ++I     +G    A +LF+EMI  G +P+   YT+ I   C 
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ EAE +   M   GV P++ TYN  ++G   +  ++RA      M+  + +PN  T
Sbjct: 713 IGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWT 772

Query: 227 FGVLMDGLCKVG----------------ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           + +L+    K+                 EL         M K G+ P +  Y+ +I G C
Sbjct: 773 YWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFC 832

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           KA  L EA  L   M   +ISP+   Y +LIK  C +     A   +  M + G    + 
Sbjct: 833 KATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLE 892

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +Y+ LI G C EGD ++A S+   +       N V +  L DG  KAG++D    L   M
Sbjct: 893 SYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952

Query: 391 VIKSLVPDVVVFTALIDGLSK-DGNMKETLR 420
             +    D   ++ L D + +  G++   LR
Sbjct: 953 DNRHCRIDSESYSMLTDSIREASGSVVSELR 983


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 239/485 (49%), Gaps = 43/485 (8%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLI 59
           + ++LA +K +K A   +K +TE L+K  K       VF  L    +   ++P +F  L+
Sbjct: 131 LVHILAWSKEFKEA---MKFLTE-LIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLV 186

Query: 60  IAFSEMGHIEEALWVYRKI-EV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+   G I+E    +RKI EV  +P++ +CN LLNGL+K  + D  W+ Y+EM   G+ 
Sbjct: 187 KAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIH 246

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +  T+ +L    C  GDV K  +  + M ++G EP +V Y  LI   C + ++ +A  +
Sbjct: 247 PNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYL 306

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           +R M    V+P+L +Y ALM+G CK   V  A + +H M+H  L P++V+F  L+ G CK
Sbjct: 307 YRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCK 366

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G++R + +    M   G+ P+      LI+G+ K   +  A++L  E+E+F +      
Sbjct: 367 EGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDI 426

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+ L+  +C  G+   A+ LLQ++ + G +  V  YN LI+  CK   +  AL V S+M 
Sbjct: 427 YDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMG 486

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV--------------- 401
            + ++P+ +T+ +LI   C+      A  L  EM+   ++PD  +               
Sbjct: 487 HRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIG 546

Query: 402 --------------------FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
                               +  L+    +D +    + L   ML+    P++ T   +I
Sbjct: 547 KAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMI 606

Query: 442 HGLFK 446
           HGL+K
Sbjct: 607 HGLWK 611



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 235/487 (48%), Gaps = 32/487 (6%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEA--------- 173
           VL+ C   Q D + AL  F  +  D G++P++  Y  L+H L    +  EA         
Sbjct: 97  VLLRC---QSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIK 153

Query: 174 --------ESMFRSM----RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
                   E +F+++    ++C   P ++  + L+  Y +   +      + +++     
Sbjct: 154 LVKDCSFNEDVFQTLLFCCQDCNWDPVIF--DMLVKAYVREGMIKEGFTTFRKIVEVGCV 211

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P+V++   L++GL K+  +      +  MA+ G+ PN + +N L    C+ G++ +    
Sbjct: 212 PSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDF 271

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
              ME+    PD+ TYN LI   C  G+L+ A  L + MY+  +L ++V+Y +L++G CK
Sbjct: 272 LERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCK 331

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           EG + +A  +  +M  +G+ P++V+F++LI G CK G +  +  L  EM+   + PD V 
Sbjct: 332 EGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVT 391

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
              LI+G  K+  +   L L  E+    +  S      L+  + + GR   A +     +
Sbjct: 392 CQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRIS 451

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            +   GY  P   +Y  +I++LC    I  A  + S+M   N++P   TY  ++  L R 
Sbjct: 452 QR---GYV-PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRT 507

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL-KSAFRCSEFLKESRIGSSETE 580
            R ++   L+ +M++ G++PD  I + ++  Y +  D+ K+      F KE +I  SE+ 
Sbjct: 508 SRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESY 567

Query: 581 GHTTRSF 587
               +++
Sbjct: 568 NTLVKTY 574



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 226/499 (45%), Gaps = 23/499 (4%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL----CGLVADV--------- 119
           WV   + + P+IQ    L++ L    +F    +F  E++     C    DV         
Sbjct: 114 WVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQ 173

Query: 120 ------VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
                 V + +L+     +G + +    F ++++ G  P+V+    L++GL   N++ + 
Sbjct: 174 DCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQC 233

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +++ M   G+ PN YT+N L   +C+  DV++  +F   M     +P++VT+  L+  
Sbjct: 234 WQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISC 293

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C+ G L  A   +  M +  V P++  Y  L++G CK G + EA  L   M    ++PD
Sbjct: 294 YCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPD 353

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + ++N LI G C  G++  +  LL +M   GI  + VT   LI+GY KE  +  AL++  
Sbjct: 354 IVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVV 413

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++   GV  +   +  L+   C+ G   AA  L   +  +  VP V ++  LI+ L K  
Sbjct: 414 ELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSD 473

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ + L +  EM    I PS  T  +LI  L +  R   A +   E      G    P+ 
Sbjct: 474 SIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQS--GMLPDPD- 530

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
            +  A++   C +  I KA  L      +    D+ +Y T+++          +M L   
Sbjct: 531 -ICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDR 589

Query: 534 MIKMGIVPDAVINQVMVRG 552
           M+K+G  P+    + M+ G
Sbjct: 590 MLKVGFAPNIQTFRQMIHG 608



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 75/356 (21%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLN 92
           V + L  +E   F P +  ++TLI  +   G +++A ++YR   +  VLP + +  AL+N
Sbjct: 268 VNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMN 327

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL K+GK     + +  M+  GL  D+V++  LI   C +G + ++ +L  EMI  GI P
Sbjct: 328 GLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICP 387

Query: 153 TVVIYTILIHG-----------------------------------LCNENKMVEAESMF 177
             V   +LI G                                   +C E +   A+S+ 
Sbjct: 388 DKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLL 447

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           + + + G VP +  YN L++  CK   +  AL    EM H N++P+ +T+  L+  LC+ 
Sbjct: 448 QRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRT 507

Query: 238 GELRAAGNFFVHMAKFGVFPN--------------------------------IF---VY 262
                A +    M + G+ P+                                IF    Y
Sbjct: 508 SRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESY 567

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           N L+  +C+  +    M L   M K   +P++ T+  +I GL     +E  + LL+
Sbjct: 568 NTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKDKLLLE 623


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 240/507 (47%), Gaps = 12/507 (2%)

Query: 52  PSVFSTLII--AFSEMGHIEEALWVYRKIE-----VLPAIQACNALLNGLIKKGKFDSVW 104
           P+VFS  II     +    + AL +++ +        P + A N +++G  K+G+     
Sbjct: 226 PNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKAC 285

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + EM   G+  DVVTY ++ID  C    + KA  +  +M   G +P  V Y  +IHG 
Sbjct: 286 SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGY 345

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++ EA  MFR M+  G++PN+   N+ +   CK      A E +  M     +P++
Sbjct: 346 ATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDI 405

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V++  L+ G    G        F  M   G+  +  V+N LI  + K G + +AM + +E
Sbjct: 406 VSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE 465

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M++  +SPDV TY+ +I     +G+L  A     +M   GI  N   Y+S+I G+C  G 
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525

Query: 345 MEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           + KA  + S+M  KG+  P++V F+S+I+  CK G +  A  ++  +      PDV+ FT
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +LIDG    G M +  ++   M    +   + T S+L+ G FKNGRI++ L  F E   K
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN V Y  ++  L   G+ + A K F +M           Y  +L GL R   
Sbjct: 646 G----VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMV 550
             + ++L   +  M +     I   M+
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMI 728



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 230/450 (51%), Gaps = 8/450 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES-MF 177
           V TY +L+DCCC        L LF  ++  G++   +  + L+  LC  N+  EA + + 
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLC 235
             M E G VPN+++Y+ ++ G C  +   RAL+ +  M        PNVV +  ++ G  
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K GE   A + F  M + GV P++  YN +ID  CKA  + +A  +  +M      PD  
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN +I G   +G+L+ A  + +KM   G++ N+V  NS +   CK G  ++A  +   M
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           T KG +P++V++ +L+ G    G     +GL+  M    +  D  VF  LI   +K G +
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            + + ++ EM +  ++P V T S++I    + GR+++A    +EK ++       PN  +
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDA----MEKFNQMVARGIQPNTAV 512

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           Y +IIQ  C  G ++KA +L S+M +  + RPD   + +++  L +  R++D   +   +
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLV 572

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +G  PD +    ++ GY   G +  AF+
Sbjct: 573 TDIGERPDVITFTSLIDGYCLVGKMDKAFK 602



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 248/508 (48%), Gaps = 8/508 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I  ++ +G ++EA  ++RK++   ++P I  CN+ L  L K G+     E ++ M
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+V+Y  L+     +G     + LF+ M   GI     ++ ILIH       +
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F  M++ GV P++ TY+ ++  + ++  +  A+E +++M+   +QPN   +  +
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           + G C  G L  A      M   G+  P+I  +N +I+  CK G + +A  +   +    
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PDV T+  LI G C VG+++ A  +L  M   G+  ++VTY++L+DGY K G +   L
Sbjct: 577 ERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGL 636

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  +M  KGV+PN VT+  ++ G  +AG   AA   + EM+       V ++  ++ GL
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            ++    E + L++++    +  S+  ++++I+ ++K  R   A   F   T    G   
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF--ATISASG--L 752

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y  +I  L  DG +  A+ +FS M    + P +     ++R LL    +     
Sbjct: 753 LPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENG 557
            L+ +    I+ +A    +M+  +   G
Sbjct: 813 YLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 192/386 (49%), Gaps = 16/386 (4%)

Query: 185 VVP-NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           VVP  ++TY+ LMD  C+    +  L  +  +L   L+ + +T   L+  LC       A
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEA 211

Query: 244 GNFFVH-MAKFGVFPNIFVYNCLIDGHC------KAGNLFEAMSLCSEMEKFEISPDVFT 296
            N  +H M++ G  PN+F Y+ ++ G C      +A +LF+ M+     E    SP+V  
Sbjct: 212 VNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA----KEGGACSPNVVA 267

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN +I G    G+   A  L  +M ++G+  +VVTYN +ID  CK   M+KA  V  QMT
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G +P+ VT++ +I G    G +  A  ++ +M  + L+P++V+  + +  L K G  K
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSK 387

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   ++  M      P + +  +L+HG    G  ++ +  F   + K++G   + +  ++
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLF--NSMKSNG--IAADCRVF 443

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I A    G +  A  +F++M+   + PD  TY+T++    R  R+ D M     M+ 
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSA 562
            GI P+  +   +++G+  +G L  A
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKA 529



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 221/465 (47%), Gaps = 11/465 (2%)

Query: 8   AKLYKN--ARCLIKDVT--ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIA 61
           AK+++   +R LI ++    + L S   H          +S+      P + S  TL+  
Sbjct: 355 AKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHG 414

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQAC---NALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           ++  G   + + ++  ++       C   N L++   K+G  D     + EM   G+  D
Sbjct: 415 YASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPD 474

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           VVTY  +I      G +  A+  F++M+ +GI+P   +Y  +I G C    +V+A+ +  
Sbjct: 475 VVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVS 534

Query: 179 SMRECGVV-PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
            M   G+  P++  +N++++  CK   V  A + +  +     +P+V+TF  L+DG C V
Sbjct: 535 EMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLV 594

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G++  A      M   GV  +I  Y+ L+DG+ K G + + ++L  EM++  + P+  TY
Sbjct: 595 GKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTY 654

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++ GL   G+   A     +M + G    V  Y  ++ G C+    ++A+ +  ++  
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
             V+ ++   +++I+   K    + A  L+  +    L+P+   +  +I  L KDG +++
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVED 774

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
              ++  M ++ I P    ++ +I  L + G I+ A N +L K D
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN-YLSKVD 818



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 209/433 (48%), Gaps = 5/433 (1%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGL 94
           +FN++ S  I   +  VF+ LI A+++ G +++A+ ++ +++   V P +   + +++  
Sbjct: 427 LFNSMKSNGIAA-DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPT 153
            + G+     E + +MV  G+  +   Y  +I   C  G ++KA  L  EMI+KGI  P 
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           +V +  +I+ LC + ++++A  +F  + + G  P++ T+ +L+DGYC V  +++A +   
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
            M    ++ ++VT+  L+DG  K G +      F  M + GV PN   Y  ++ G  +AG
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
               A     EM +   +  V  Y I++ GLC     + A  L QK+    +  ++   N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I+   K    E+A  + + ++  G+ PN  T+  +I    K G ++ A  +++ M   
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            +VP   +   +I  L + G + +      ++   +I     T S ++    + G+    
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHED 845

Query: 454 LNFFLEKTDKTDG 466
           +     K +  DG
Sbjct: 846 MKLLPAKYNFFDG 858



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 4/214 (1%)

Query: 351 VCSQMTEKGVEP-NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           VC +     V P  V T+S L+D  C+A   D  + L+  ++   L    +  + L+  L
Sbjct: 143 VCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCL 202

Query: 410 SKDGNMKETLR-LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
                 +E +  L   M E    P+VF+ S ++ GL  N     AL+ F  +    +GG 
Sbjct: 203 CYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF--QMMAKEGGA 260

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
           CSPN V Y  +I     +G+  KA  LF +M    ++PD  TY  ++  L +A+ M    
Sbjct: 261 CSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++L  M   G  PD V    M+ GY   G LK A
Sbjct: 321 LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEA 354


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/476 (32%), Positives = 236/476 (49%), Gaps = 24/476 (5%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D +   +  M+L      V+ +G ++            ++LF ++   GI+P +V  +IL
Sbjct: 53  DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  +M  A S+F  + + G  PN  T   L+ G+C    V  AL F+  +L    
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N V++G L++GLCK+GE RAA      +    V  ++ +Y+ +IDG CK   + +A  
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L SEM    ISP V T N LI G C VGQ + A GLL++M  + I  +V T+N L+D  C
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC 292

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC--------------------KAGNI 380
           KEG +++A S  + M ++GV P+VVT+SSL+DG C                    K   +
Sbjct: 293 KEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMV 352

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ L+ EM  + + PD V + +LIDGL K G +     L  EM ++     + T +SL
Sbjct: 353 DKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSL 412

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I  L KN  +  A+   L K  K  G     +   Y  +I  LC  G++  A  +F D+ 
Sbjct: 413 IDALCKNHHVDKAIA--LVKKIKDQG--IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLL 468

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
                    TYT M+ GL     + +   LL+ M   G VPDAV  + ++R   EN
Sbjct: 469 IKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEN 524



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 192/380 (50%), Gaps = 18/380 (4%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           FN   + TLI    ++G    AL + R+IE   V   +   + +++GL K    +  +E 
Sbjct: 174 FNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYEL 233

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EM+   +   VVT   LI   C  G   +A  L  EM+ K I P V  + IL+  LC 
Sbjct: 234 YSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCK 293

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K+ EA+S    M + GV+P++ TY++LMDGYC V +VN+A   Y              
Sbjct: 294 EGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVY-------------- 339

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             ++++G CK+  +  A + F  M    + P+   YN LIDG CK+G +  A  L  EM 
Sbjct: 340 -SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMR 398

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 D+ TYN LI  LC    ++ A  L++K+  +GI  ++ TYN LIDG CK+G ++
Sbjct: 399 DSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLK 458

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +   +  KG    V T++ +I+G C  G ++ A  L ++M     VPD V    +I
Sbjct: 459 DAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 518

Query: 407 DGLSKDGNMKETLRLYKEML 426
             L ++   +   +L +EM+
Sbjct: 519 RALFENDKNERAEKLLREMI 538



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 24/408 (5%)

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           S F  M      P++  +  ++    K+      +  ++++  + ++PN+V+  +L++  
Sbjct: 57  SSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCY 116

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C +G++R A + F  + K G  PN      L+ G C    + EA+     +       + 
Sbjct: 117 CHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQ 176

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +Y  LI GLC +G+   A  +L+++  + +  +VV Y+++IDG CK+  +  A  + S+
Sbjct: 177 VSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSE 236

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  K + P VVT +SLI G C  G    A GL  EMV+K++ PDV  F  L+D L K+G 
Sbjct: 237 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 296

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSL--------------------IHGLFKNGRISNAL 454
           +KE       M++  + P V T SSL                    I+G  K   +  AL
Sbjct: 297 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKAL 356

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F E   +      +P+ V Y ++I  LC  G+I  A +L  +MR      D  TY ++
Sbjct: 357 SLFYEMRCRR----IAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSL 412

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +  L +   +   + L+  +   GI  D     +++ G  + G LK A
Sbjct: 413 IDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDA 460



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+V+ F  ++    K  +    + L+ ++    + P++V  + LI+     G M+    +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + ++L+    P+  T+++L+ G   N ++  AL+F     D         N V Y  +I 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFH----DHVLALGFHFNQVSYGTLIN 184

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G+   A ++   +    +  D   Y+T++ GL + K + D   L ++MI   I P
Sbjct: 185 GLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISP 244

Query: 542 DAVINQVMVRGYQENGDLKSAF 563
             V    ++ GY   G  K AF
Sbjct: 245 TVVTLNSLIYGYCIVGQFKEAF 266


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 218/429 (50%), Gaps = 5/429 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N ++ GL++  ++       E +V  G V DV TYG LI   C    + +A+NL+D+M +
Sbjct: 365 NLVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE 423

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G++P++V Y  L+ G C + +M EA  ++  M + G  PN  TY  LM GY K    + 
Sbjct: 424 AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDN 483

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A    +EM  + +     T+ +L++GL  V  +             G  P    YN +I+
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIIN 543

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  KAG +  A  +  +M K  I+P++ TY   I G C     + A  LL  + ++GI  
Sbjct: 544 GFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQP 603

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++  YN+ ID +CK+G+M +AL     + + G+ P+V  ++S + G      +  A   Y
Sbjct: 604 DIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY 663

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M+ + +V D  ++T LIDG SK GN+   L LY EM+   + P   T ++L HGL ++
Sbjct: 664 YSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRS 723

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I  A    L+   + D    SPN V Y  +I A   DG++ +A +L  +M S  + PD
Sbjct: 724 GDIDGA-KRLLDDMRRLD---VSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPD 779

Query: 508 NCTYTTMLR 516
           + TY  + R
Sbjct: 780 DTTYDILPR 788



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 273/570 (47%), Gaps = 44/570 (7%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K +  V++  I    ++   + AL V  K+      P     +++++ L+K G+ D    
Sbjct: 217 KPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALR 276

Query: 106 FYEEMVLC-GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             ++M+L  G   DVV   +L+   C  G+V KAL+LFDE++  G+ PT V Y +LI G 
Sbjct: 277 LKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGC 336

Query: 165 CNENKMVEAESMFRSMRECGV----------------------------------VPNLY 190
             E    E   + R M E G+                                  VP+++
Sbjct: 337 DAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVF 396

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           TY  L+   CK   ++ A+  + +M    ++P++VT+  L+ G C+ G +  A   +  M
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G  PN   Y  L+ G+ K      A +L +EM +  +S   +TYNILI GL  V ++
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
              + +L++   EG +   +TYNS+I+G+ K G M  A  +  QM +KG+ PN+VT++S 
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           IDG C+    D A+ L   +    + PD+  + A ID   K GNM   L     +L+  +
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 431 TPSVFTVSSLIHGLFKNGRI-SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           TP V   +S + G +KN ++ + A  F+     +        +  +Y  +I      G +
Sbjct: 637 TPDVTVYNSFVTG-YKNLKMMAEASKFYYSMIKQR----VVADTEIYTTLIDGFSKVGNV 691

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A +L+S+M ++++ PD+ T+T +  GL R+  +     LL DM ++ + P+ V   ++
Sbjct: 692 AFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNML 751

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           +     +G L+ AF+  + +  S +   +T
Sbjct: 752 INACVRDGKLQEAFQLHDEMLSSGVVPDDT 781



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 251/557 (45%), Gaps = 52/557 (9%)

Query: 39  FNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVY--------RKIEVLPAIQACN 88
              L  +    F P    +S+++    ++G ++EAL +         +K++V+ A     
Sbjct: 240 LQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATM--- 296

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            L++G    G+     + ++E+V  G+    VTYGVLI  C  +G   +   L  +MI++
Sbjct: 297 -LMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQ 355

Query: 149 GI----------------------------------EPTVVIYTILIHGLCNENKMVEAE 174
           G+                                   P V  Y  LIH LC   K+ EA 
Sbjct: 356 GLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAV 415

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           +++  M+E GV P++ TY++L+ GYC+   ++ AL+ Y EM      PN VT+  LM G 
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K      A      M + GV    + YN LI+G      + E   +          P  
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN +I G    G +  A G+ ++M K+GI  N+VTY S IDGYC+    + A+ +   
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           +   G++P++  +++ ID  CK GN+  A+     ++   L PDV V+ + + G      
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKM 655

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           M E  + Y  M++ ++       ++LI G  K G ++ AL  + E        +  P+  
Sbjct: 656 MAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM----ANHVIPDDK 711

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            + A+   LC  G I  A +L  DMR  ++ P+  TY  ++   +R  ++ +   L  +M
Sbjct: 712 TFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771

Query: 535 IKMGIVPDAVINQVMVR 551
           +  G+VPD     ++ R
Sbjct: 772 LSSGVVPDDTTYDILPR 788



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 228/551 (41%), Gaps = 81/551 (14%)

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK------------------ 148
           Y  MV  G+V D  +   L+           AL LFDEM  K                  
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 149 -----------------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
                            G++P   +Y I I GLC       A  +   MRE G  P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 192 YNALMDGYCKVADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           Y++++D   KV  ++ AL    +M L    + +VV   +LM G C  GE+  A + F  +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-------EKFEIS------------ 291
              GV P    Y  LI G    G   E   LC +M         +E +            
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 292 ---------------PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
                          PDVFTY  LI  LC   +L  A  L  KM + G+  ++VTY+SL+
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            GYC++G M++AL + S+M +KG  PN VT+++L+ G  K    D A  L  EM    + 
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
                +  LI+GL     + E   + K  L     P+  T +S+I+G  K G + +A   
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           + +   K      +PN V Y + I   C       A KL   +R D ++PD   Y   + 
Sbjct: 558 YRQMRKKG----ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF---LKESR 573
              +   M   +  L  ++K G+ PD  +    V GY+   +LK     S+F   + + R
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK---NLKMMAEASKFYYSMIKQR 670

Query: 574 IGSSETEGHTT 584
           +  ++TE +TT
Sbjct: 671 V-VADTEIYTT 680


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 234/492 (47%), Gaps = 26/492 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ L+  + ++G ++EA   + +  +  VLP ++    L+ GL K GK D  +   
Sbjct: 117 NRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM    L+  VVTY +LI+ C      +K   L DEM  KG++P  V Y +++     E
Sbjct: 177 DEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKE 236

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM  A +  R M E G  P+  T+N L +GYCK   ++ A     EM    L+ N VT 
Sbjct: 237 GKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 296

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++  LC   +L  A       +K G F +   Y  LI G+ K G          EM++
Sbjct: 297 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG----KSXXWDEMKE 352

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            EI P + TY  +I GLC  G+ + +     ++ + G++ +  TYN++I GYC+EG ++K
Sbjct: 353 KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDK 412

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A    ++M +K  +P++ T + L+ G C  G +D A+ L+   + K    D V F  +I 
Sbjct: 413 AFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIIS 472

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKT 464
           GL ++G  +E   L  EM E K+ P  +T ++++  L   GR+  A  F    +E+    
Sbjct: 473 GLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQ 532

Query: 465 DGGYC----------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           D                     PN V ++  I  LC  G+   A  +  +     +    
Sbjct: 533 DQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHK 592

Query: 509 CTYTTMLRGLLR 520
            TY +++ GL++
Sbjct: 593 STYISLMEGLIK 604



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 258/522 (49%), Gaps = 12/522 (2%)

Query: 28  SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAI 84
           S+   ++  ++F+ +  L + + N + F+ LI        + EA+ +  K++     P  
Sbjct: 25  SKPSVYLSKAIFSDVIKLGV-EVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDN 83

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
            + N +L+ L KKGK +   +   +M   GL  +  T+ +L+   C  G + +A  + D 
Sbjct: 84  VSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDI 143

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M    + P V  YT LI GLC + K+ EA  +   M    ++P++ TYN L++G  + + 
Sbjct: 144 MARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSS 203

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
             +  E   EM    ++PN VT+ V++    K G++  AGN    M + G  P+   +N 
Sbjct: 204 SLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 263

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L +G+CKAG L EA  +  EM +  +  +  T N ++  LCG  +L+ A  LL    K G
Sbjct: 264 LSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 323

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              + V+Y +LI GY K G          +M EK + P+++T+ ++I G C++G  D ++
Sbjct: 324 YFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSI 379

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
               E++   LVPD   +  +I G  ++G + +      +M++    P +FT + L+ GL
Sbjct: 380 DKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGL 439

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              G +  AL  F  KT  + G   + + V +  II  LC +G+  +A  L ++M    L
Sbjct: 440 CTEGMLDKALKLF--KTWISKGK--AIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            PD  T+  +L  L  A RM +    ++ +++ G + D  I+
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTIS 537



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 244/503 (48%), Gaps = 11/503 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVW---EFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           +++ + P +   N L+  L++     SV+     + +++  G+  +  T+ +LI  CC +
Sbjct: 2   KRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIE 61

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
             + +A+ L  +M      P  V Y  ++  LC + K+ EA  +   M+  G+ PN  T+
Sbjct: 62  NKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L+ GYCK+  +  A E    M  +N+ P+V T+  L+ GLCK G++  A      M  
Sbjct: 122 NILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMEN 181

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             + P++  YN LI+G  +  +  +   L  EME   + P+  TYN+++K     G+++ 
Sbjct: 182 LKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDN 241

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A   L+KM + G   + VT+N+L +GYCK G + +A  +  +M+ KG++ N VT ++++ 
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 301

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             C    +D A  L +    +    D V +  LI G  K G        + EM E +I P
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIP 357

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S+ T  ++I GL ++G+   +    ++K ++       P+   Y  II   C +GQ+ KA
Sbjct: 358 SIITYGTMIGGLCRSGKTDQS----IDKCNELLESGLVPDQTTYNTIILGYCREGQVDKA 413

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
               + M   + +PD  T   ++RGL     +   + L    I  G   DAV    ++ G
Sbjct: 414 FHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISG 473

Query: 553 YQENGDLKSAFRCSEFLKESRIG 575
             E G  + AF     ++E ++G
Sbjct: 474 LCEEGRFEEAFDLLAEMEEKKLG 496


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 247/498 (49%), Gaps = 8/498 (1%)

Query: 70  EALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
           EA+ VYR++ +    P++Q  ++L+ GL K+   +SV    +EM   GL  +V T+ + I
Sbjct: 208 EAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICI 267

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
                 G + +A  +   M D+G  P VV YT+LI  LC   K+  A+ +F  M+     
Sbjct: 268 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHK 327

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  TY  L+D +    D++   +F+ EM      P+VVTF +L+D LCK G    A   
Sbjct: 328 PDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK 387

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M   G+ PN+  YN LI G  +   L +A+ +   ME   + P  +TY + I     
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGK 447

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G    A    +KM  +GI  N+V  N+ +    K G   +A  +   + + G+ P+ VT
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++ ++    K G ID A+ L +EMV     PDV+V  +LI+ L K   + E  +++  M 
Sbjct: 508 YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 567

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E K+ P+V T ++L+ GL KNG+I  A+  F     K     C PN + +  +   LC +
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG----CPPNTITFNTLFDCLCKN 623

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            ++  A K+   M      PD  TY T++ GL++  ++ + M     M K+ + PD V  
Sbjct: 624 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTL 682

Query: 547 QVMVRGYQENGDLKSAFR 564
             ++ G  + G ++ A++
Sbjct: 683 CTLLPGVVKAGLIEDAYK 700



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 266/614 (43%), Gaps = 85/614 (13%)

Query: 38   VFNALNSLEIPKFNPSVFSTLIIA--FSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
            +F+ + SL +    P+ ++ ++    + + G    AL  + K++   + P I ACNA L 
Sbjct: 422  IFDNMESLGV---KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478

Query: 93   GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
             L K G+     + +  +   GLV D VTY +++ C    G++ +A+ L  EM++   EP
Sbjct: 479  SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 153  TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
             V++   LI+ L   +++ EA  MF  M+E  + P + TYN L+ G  K   +  A+E +
Sbjct: 539  DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 213  HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC-------- 264
              M+     PN +TF  L D LCK  E+  A      M   G  P++F YN         
Sbjct: 599  EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 265  --------------------------LIDGHCKAG---------------------NLFE 277
                                      L+ G  KAG                     NLF 
Sbjct: 659  GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFW 718

Query: 278  AMSLCSEMEKFEISPDV-FTYNILIKGLCGVG---------------QLEGAEGLLQKMY 321
               + S + +  I   V F+  ++  G+C  G                  GA  L +K  
Sbjct: 719  EDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFT 778

Query: 322  KE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K+ G+   + TYN LI G  +   +E A  V  Q+   G  P+V T++ L+D   K+G I
Sbjct: 779  KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838

Query: 381  DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSS 439
            D    +Y EM      P+ +    +I GL K GN+ + L LY +++  +  +P+  T   
Sbjct: 839  DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898

Query: 440  LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
            LI GL K+GR+  A   F   +D      C PN  +Y  +I      G+   A  LF  M
Sbjct: 899  LIDGLSKSGRLYEAKQLFEGMSDYG----CRPNCAIYNILINGFGKAGEADAACALFKRM 954

Query: 500  RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
              + +RPD  TY+ ++  L    R+ + +    ++ + G+ PD V   +++ G  +   L
Sbjct: 955  VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRL 1014

Query: 560  KSAFRCSEFLKESR 573
            + A      +K+SR
Sbjct: 1015 EEALVLFNEMKKSR 1028



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 250/566 (44%), Gaps = 79/566 (13%)

Query: 54   VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI    +   ++EA  ++   +++++ P +   N LL GL K GK     E +E M
Sbjct: 542  VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 601

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            V  G   + +T+  L DC C   +V  AL +  +M+D G  P V  Y  +I GL    ++
Sbjct: 602  VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 661

Query: 171  VEAESMFRSMRE---------CGVVPNLYTYNALMDGYCKVAD----------------- 204
             EA   F  M++         C ++P +     + D Y  +A+                 
Sbjct: 662  KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDL 721

Query: 205  ---------VNRALEFYHEML---------------------HHN--------------- 219
                     ++ A+ F   ++                     H+N               
Sbjct: 722  MGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDL 781

Query: 220  -LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
             +QP + T+ +L+ GL +   +  A + F+ +   G  P++  YN L+D + K+G + E 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILANVVTYNSLID 337
              +  EM   E  P+  T+NI+I GL   G ++ A  L    M          TY  LID
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901

Query: 338  GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
            G  K G + +A  +   M++ G  PN   ++ LI+G  KAG  DAA  L+  MV + + P
Sbjct: 902  GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961

Query: 398  DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
            D+  ++ L+D L   G + E L  ++E+ E+ + P V   + +I+GL K  R+  AL  F
Sbjct: 962  DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLF 1021

Query: 458  LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
             E   K+ G   +P+   Y ++I  L   G + +A K++++++   L P+  T+  ++RG
Sbjct: 1022 NE-MKKSRG--ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078

Query: 518  LLRAKRMLDVMMLLADMIKMGIVPDA 543
               + +      +   M+  G  P+ 
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFSPNT 1104



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 223/548 (40%), Gaps = 74/548 (13%)

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           + CN +L  L   GK + +   ++ M    +  D  TY  +  C   +G + +A     +
Sbjct: 121 ETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRK 180

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M + G       Y  LIH L       EA  ++R M   G  P+L TY++LM G  K  D
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD 240

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           +   +    EM    L+PNV TF + +  L + G++  A      M   G  P++  Y  
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300

Query: 265 LIDGHCKAGNL------FEAM-----------------------------SLCSEMEKFE 289
           LID  C A  L      F  M                                SEMEK  
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL-------------- 335
             PDV T+ IL+  LC  G    A   L  M  +GIL N+ TYN+L              
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420

Query: 336 ---------------------IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
                                ID Y K GD   AL    +M  KG+ PN+V  ++ +   
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 480

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            KAG    A  ++  +    LVPD V +  ++   SK G + E ++L  EM+E    P V
Sbjct: 481 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDV 540

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
             V+SLI+ L+K  R+  A   F+   +        P  V Y  ++  L  +G+I +A +
Sbjct: 541 IVVNSLINTLYKADRVDEAWKMFMRMKEMK----LKPTVVTYNTLLAGLGKNGKIQEAIE 596

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M      P+  T+ T+   L +   +   + +L  M+ MG VPD      ++ G  
Sbjct: 597 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656

Query: 555 ENGDLKSA 562
           +NG +K A
Sbjct: 657 KNGQVKEA 664



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 172/328 (52%), Gaps = 7/328 (2%)

Query: 48   PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
            PK     ++ LI    E   IE A  V+ +++    +P +   N LL+   K GK D ++
Sbjct: 785  PKL--PTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELF 842

Query: 105  EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF-DEMIDKGIEPTVVIYTILIHG 163
            E Y+EM       + +T+ ++I      G+V  AL+L+ D M D+   PT   Y  LI G
Sbjct: 843  EIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 902

Query: 164  LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            L    ++ EA+ +F  M + G  PN   YN L++G+ K  + + A   +  M+   ++P+
Sbjct: 903  LSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 962

Query: 224  VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            + T+ VL+D LC VG +    ++F  + + G+ P++  YN +I+G  K   L EA+ L +
Sbjct: 963  LKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFN 1022

Query: 284  EMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM+K   I+PD++TYN LI  L   G +E A  +  ++ + G+  NV T+N+LI GY   
Sbjct: 1023 EMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1082

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            G  E A +V   M   G  PN  T+  L
Sbjct: 1083 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 216/458 (47%), Gaps = 4/458 (0%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G + +   +FD M  + I+     Y  +   L  +  + +A    R MRE G V N Y+
Sbjct: 133 DGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYS 192

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YN L+    K      A+E Y  M+    +P++ T+  LM GL K  ++ +       M 
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+ PN++ +   I    +AG + EA  +   M+     PDV TY +LI  LC   +L+
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ +  KM       + VTY +L+D +    D++      S+M + G  P+VVTF+ L+
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           D  CKAGN   A      M  + ++P++  +  LI GL +   + + L ++  M    + 
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+ +T    I    K+G   +AL  F EK  KT G   +PN V   A + +L   G+  +
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETF-EKM-KTKG--IAPNIVACNASLYSLAKAGRDRE 488

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A ++F  ++   L PD+ TY  M++   +   + + + LL++M++    PD ++   ++ 
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
              +   +  A++    +KE ++  +    +T  + LG
Sbjct: 549 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 586



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 15/473 (3%)

Query: 52   PSVFS--TLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
            P VF+  T+I    + G ++EA+  + +++  V P       LL G++K G  +  ++  
Sbjct: 643  PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKII 702

Query: 108  EEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI--EPTVVIYTILIHGL 164
               +  C      + +  L+     +  +  A++  + ++  GI  +   ++  I+ +  
Sbjct: 703  ANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSF 762

Query: 165  CNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
               N    A  +F    ++ GV P L TYN L+ G  +   +  A + + ++ +    P+
Sbjct: 763  -KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPD 821

Query: 224  VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V T+  L+D   K G++      +  M+     PN   +N +I G  KAGN+ +A+ L  
Sbjct: 822  VATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYY 881

Query: 284  E-MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            + M   + SP   TY  LI GL   G+L  A+ L + M   G   N   YN LI+G+ K 
Sbjct: 882  DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKA 941

Query: 343  GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
            G+ + A ++  +M ++GV P++ T+S L+D  C  G +D  +  + E+    L PDVV +
Sbjct: 942  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCY 1001

Query: 403  TALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
              +I+GL K   ++E L L+ EM +++ ITP ++T +SLI  L   G +  A   +    
Sbjct: 1002 NLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIY---- 1057

Query: 462  DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            ++       PN   + A+I+     G+   A  ++  M +    P+  TY  +
Sbjct: 1058 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 242/502 (48%), Gaps = 13/502 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV-TYGVLIDCCCGQGD 134
           R+  V P+ ++ N +L+ L +          Y  MV    V     T+GV     C  G 
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
             +AL L   M   G  P  V+Y  +IH LC++  + EA ++   M   G   ++ T++ 
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++ G C +  V  A      M+     P V+T+G L+ GLC+V +   A       A  G
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA------RAMLG 304

Query: 255 VFP--NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
             P  N+ ++N +I G    G L EA  L   M      PD  TY+IL+ GLC +G++  
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGS 364

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  LL++M K+G   NVVTY  ++  +CK G  +   ++  +M+ KG+  N   ++ +I 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK G +D AMGL  EM  +   PD+  +  +I  L  +  M+E   +++ +LE  +  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T +++IH L ++GR  +A+    E         CS + V Y  +I+A+C DG + ++
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHG----CSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  +M    ++P+N +Y  ++  L + +R+ D + L   M+  G+ PD V    ++ G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
             + G + +A    E L    +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENV 622



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 237/504 (47%), Gaps = 25/504 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F     A   +G  +EAL + R +     +P       +++ L  +G          EM
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G  ADV T+  ++   CG G V +A  L D M+ KG  P V+ Y  L+ GLC   + 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 171 VEAESMFRSMRECGVVP--NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            EA +M       G VP  N+  +N ++ G      +  A E Y  M     QP+  T+ 
Sbjct: 297 DEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 350

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +LM GLCK+G + +A      M K G  PN+  Y  ++   CK G   +  +L  EM   
Sbjct: 351 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            ++ +   YN +I  LC  G+++ A GL+Q+M  +G   ++ +YN++I   C    ME+A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   + E+GV  N +T++++I    + G    A+ L  EM++     DVV +  LI  
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           + KDGN+  +L L +EM E  I P+  + + LI  L K  R+ +AL    +  ++     
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG---- 586

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ V Y  +I  LC  G +  A  L   + ++N+ PD  TY  ++    + + + D  
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646

Query: 529 MLL----------ADMIKMGIVPD 542
           MLL           D   M I+PD
Sbjct: 647 MLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 230/485 (47%), Gaps = 12/485 (2%)

Query: 70  EALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +AL +YR++     V P           L + G+ D        M   G V D V Y  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 216

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I   C QG V +A  L +EM+  G    V  +  ++ G+C   ++ EA  +   M   G 
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           +P + TY  L+ G C+V   + A      ML    + NVV F  ++ G    G+L  A  
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATE 332

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            +  M   G  P+   Y+ L+ G CK G +  A+ L  EMEK   +P+V TY I++   C
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 392

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G  +    LL++M  +G+  N   YN +I   CK+G M++A+ +  +M  +G  P++ 
Sbjct: 393 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           +++++I   C    ++ A  ++  ++ + +V + + +  +I  L +DG  ++ +RL KEM
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +    +  V + + LI  + K+G +  +L    E  +K       PN+V Y  +I  LC 
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG----IKPNNVSYNILISELCK 568

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           + ++  A +L   M +  L PD  TY T++ GL +   M   + LL  +    + PD + 
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 546 NQVMV 550
             +++
Sbjct: 629 YNILI 633



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 4/366 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDS 102
            +P+ N  +F+T+I      G + EA  +Y  + +    P     + L++GL K G+  S
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGS 364

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                 EM   G   +VVTY +++   C  G       L +EM  KG+      Y  +I+
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC + +M EA  + + MR  G  P++ +YN ++   C    +  A   +  +L   +  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N +T+  ++  L + G  + A      M   G   ++  YN LI   CK GN+  ++ L 
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM +  I P+  +YNILI  LC   ++  A  L ++M  +G+  ++VTYN+LI+G CK 
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI-DAAMGLYTEMVIKSLVPDVVV 401
           G M  AL++  ++  + V P+++T++ LI   CK   + DAAM L   M     V D  +
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRI 664

Query: 402 FTALID 407
              L D
Sbjct: 665 MQILPD 670


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 240/484 (49%), Gaps = 17/484 (3%)

Query: 62  FSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
            + M H E    V R + V  A    + L+NGL+K G         +E    G   D+ T
Sbjct: 207 LAAMDHFEA---VRRSMPVSAAT--FSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  +++       + +A+ L +++   G  PT+  Y  L++GLC   ++ EA  + R + 
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G  P++ TY +L+DG  K      A + + EM    L  + V +  L+ GL + G++ 
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A + +  M   G  P++   + +IDG  KAG +  A+ +   ME   ++P+   Y+ LI
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 441

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            GLC   +++ A  +L +M K     + +TYN LIDG CK GD+E A +   +M E G +
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 501

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+V T++ LI G CKAGN DAA G+  +M          V+++L+DGL K G ++    L
Sbjct: 502 PDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCML 556

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EM  + +  S  T + LI  L K  R+  A++ F     + +G    P+   Y +II 
Sbjct: 557 FHEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLF--NAIRKEG---MPHPYAYNSIIS 610

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           AL   G++ +   ++ +M +   +PD  TY  +L G++ A RM        +M   G VP
Sbjct: 611 ALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669

Query: 542 DAVI 545
              I
Sbjct: 670 PVSI 673



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 229/486 (47%), Gaps = 15/486 (3%)

Query: 101 DSVWEFYE--EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           D  WE ++       G    V T   L+D         +A NL    +     P V  + 
Sbjct: 99  DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWN 158

Query: 159 ILIHGLCNENKMVEAESMFRSMRE-CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           +LI G C   +  EA ++ R M E  GV P+L T+N ++ G CK   V  A++ + E + 
Sbjct: 159 VLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVR 217

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            ++  +  TF +L++GL K G +  A +        G   +I  Y  +++   K   + E
Sbjct: 218 RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQE 277

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A++L  ++     +P + TYN L+ GLC +G+LE A  LL+K+   G   +VVTY SLID
Sbjct: 278 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 337

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G  KE    +A  +  +M  +G+  + V +++LI G  + G I  A  +Y  M     VP
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVP 397

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           DVV  + +IDGLSK G +   +R++K M    + P+    S+LIHGL K  ++  AL   
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 457

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            +        +C+P+ + Y  +I  LC  G +  A   F +M     +PD  TY  ++ G
Sbjct: 458 AQMKK----AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 513

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           L +A        +L DM     V  ++++ +   G  E G       C  F +  R G +
Sbjct: 514 LCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGG-------CMLFHEMERSGVA 566

Query: 578 ETEGHT 583
            ++  T
Sbjct: 567 NSQTRT 572



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 227/469 (48%), Gaps = 12/469 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALN 140
           P ++  N L+ G     + +  +    EM    G+   + T+ +++   C  G V+ A++
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            F E + + +  +   ++ILI+GL     M++A S+ +     G   +++TY A+++   
Sbjct: 212 HF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLA 270

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A+    ++  +   P + T+  L++GLCK+G L  A +    +   G  P++ 
Sbjct: 271 KNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 330

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LIDG  K    FEA  L  EM    ++ D   Y  LI+GL   G++  A  + + M
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G + +VVT +++IDG  K G +  A+ +   M  +G+ PN V +S+LI G CKA  +
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ +  +M      PD + +  LIDGL K G+++     + EMLEA   P V+T + L
Sbjct: 451 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 510

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL K G    A     +          S +  +Y++++  LC  G++     LF +M 
Sbjct: 511 ISGLCKAGNTDAACGVLDDM---------SSSRFVYSSLVDGLCKSGKLEGGCMLFHEME 561

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
              +  ++ T T ++  L +A R+ + + L   + K G+      N ++
Sbjct: 562 RSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSII 609



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 192/396 (48%), Gaps = 42/396 (10%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + ++ L+    +MG +EEA+ + RKI      P +    +L++GL K+ +    ++ ++E
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   GL  D V Y  LI      G + +A +++  M   G  P VV  + +I GL    +
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A  +F+SM   G+ PN   Y+AL+ G CK   ++ ALE   +M      P+ +T+ +
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+DGLCK G++ AA  FF  M + G  P+++ YN LI G CKAGN   A  +  +M    
Sbjct: 475 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM---- 530

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL--------------ANVV----- 330
            S   F Y+ L+ GLC  G+LEG   L  +M + G+               AN V     
Sbjct: 531 -SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVS 589

Query: 331 --------------TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
                          YNS+I    K G + +  +V  +MT +  +P+ VT+++L++G   
Sbjct: 590 LFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIG 648

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           A  +D A   Y EM  +  VP V +   L D   KD
Sbjct: 649 ANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKD 684


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/349 (36%), Positives = 191/349 (54%), Gaps = 6/349 (1%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESM 176
           D  TY VL+   C  G++  A++L  EM  + G+ PT  +Y   +H LC   K+ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            ++M++    P++ T+N L+ G CK   ++ A +   EM       N+VT+  L++GL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVF 295
            G    +G   + M      P+   YN +I G CK+G +  A     EM ++   SPD F
Sbjct: 137 AGR---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           TY+ILI GLC    L  A+ LLQ+M  ++   A+VV +N+L+DGYCK  D+++A  + S 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M E G  P+VVT+S++IDG C+ G++D    L  +MV +   PDVV +T L+ GL K G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           M E  RL K MLE   TP+  T S +  GL K  ++  A +      DK
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 184/368 (50%), Gaps = 9/368 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLN----GLIKKGKFDSVWE 105
           F+   +  L+ A    G ++ A+ + R++E  P +    ++ N     L K GK     E
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M       DVVT+  LI   C  G + +A  + DEM   G    +V Y  LI+GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
           +  +  EA  + + M      P+  TYNA++ G+CK  +++RA  F  EM       P+ 
Sbjct: 136 SAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            T+ +L++GLCK   LR A      M  +     ++  +N L+DG+CKA +L  A  L S
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M +   +PDV TY+ +I GLC  G ++    LL+KM   G   +VVTY  L+ G CK G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            M +A  +  +M E G  PN VT+S + DG CK   +D A  L T +  K  + DVV F 
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFE 372

Query: 404 ALIDGLSK 411
           AL+  + K
Sbjct: 373 ALLLSVKK 380



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 176/333 (52%), Gaps = 16/333 (4%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           T+ VL+   C  GEL+AA +    M  + G+ P   +YN  +   CK+G + EAM +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+     PDV T+N LI GLC  G+L+ A+ +L +M + G  AN+VTYN+LI+G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS-LVPDVVVFT 403
             +A+ V   MT     P+  T++++I G CK+G ID A G   EM  ++   PD   ++
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNA---LNFFLE 459
            LI+GL K  N+++   L +EM+  K    SV   ++L+ G  K   +  A   L+  LE
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                    C+P+ V Y+ II  LC  G + K   L   M S   +PD  TYT ++ GL 
Sbjct: 257 HG-------CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +A +M++   L+  M++ G  P+AV   ++  G
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 10/378 (2%)

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           YTY  L+  +C   ++  A++   EM     + P    +   +  LCK G++  A     
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
           +M      P++  +N LI G CKAG L EA  +  EME+   + ++ TYN LI GL   G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTF 367
           +   A  ++Q M       +  TYN++I G+CK G++++A     +M ++ G  P+  T+
Sbjct: 139 RSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           S LI+G CK+ N+  A  L  EM+  K     VV F  L+DG  K  ++     L   ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P V T S++I GL + G +           +K     C P+ V Y  ++  LC  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALL----EKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++++A +L   M  D   P+  TY+ +  GL +  ++     LL  +   G + D V  
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371

Query: 547 QVMVRGYQENGDLKSAFR 564
           + ++   ++    ++AF+
Sbjct: 372 EALLLSVKKRLLDRAAFQ 389



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 14/276 (5%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSV 351
           D +TY +L++  C  G+L+ A  LL++M ++ G+      YN  +   CK G + +A+ V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M +   +P+VVTF++LI G CKAG +D A  +  EM       ++V +  LI+GLS 
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G   E + + + M     TP   T +++IHG  K+G I  A  F LE+  +  G  CSP
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGF-LEEMKQRAG--CSP 190

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT----YTTMLRGLLRAKRMLDV 527
           +   Y+ +I  LC    + KA +L  +M     R D C     + T++ G  +A+ +   
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIG---RKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             LL+ M++ G  PD V    ++ G    GD+   F
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF 283


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/349 (36%), Positives = 191/349 (54%), Gaps = 6/349 (1%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESM 176
           D  TY VL+   C  G++  A++L  EM  + G+ PT  +Y   +H LC   K+ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
            ++M++    P++ T+N L+ G CK   ++ A +   EM       N+VT+  L++GL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVF 295
            G    +G   + M      P+   YN +I G CK+G +  A     EM ++   SPD F
Sbjct: 137 AGR---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           TY+ILI GLC    L  A+ LLQ+M  ++   A+VV +N+L+DGYCK  D+++A  + S 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M E G  P+VVT+S++IDG C+ G++D    L  +MV +   PDVV +T L+ GL K G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           M E  RL K MLE   TP+  T S +  GL K  ++  A +      DK
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 183/368 (49%), Gaps = 9/368 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLN----GLIKKGKFDSVWE 105
           F+   +  L+ A    G ++ A+ + R++E  P +    ++ N     L K GK     E
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M       DVVT+  LI   C  G + +A  + DEM   G    +V Y  LI+GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
           +  +  EA  + + M      P+  TYNA++ G+CK  +++RA  F  EM       P+ 
Sbjct: 136 SAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            T+ +L++GLCK   LR A      M  +     ++  +N L+DG+CKA +L  A  L S
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M +   +PDV TY+ +I GLC  G ++    LL+KM   G   +VVTY  L+ G CK G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            M +A  +  +M E G  PN VT+S + DG CK   +D A  L T +  K  V DVV F 
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFE 372

Query: 404 ALIDGLSK 411
            L+  + K
Sbjct: 373 TLLLSVKK 380



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 176/333 (52%), Gaps = 16/333 (4%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           T+ VL+   C  GEL+AA +    M  + G+ P   +YN  +   CK+G + EAM +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+     PDV T+N LI GLC  G+L+ A+ +L +M + G  AN+VTYN+LI+G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS-LVPDVVVFT 403
             +A+ V   MT     P+  T++++I G CK+G ID A G   EM  ++   PD   ++
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNA---LNFFLE 459
            LI+GL K  N+++   L +EM+  K    SV   ++L+ G  K   +  A   L+  LE
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                    C+P+ V Y+ II  LC  G + K   L   M S   +PD  TYT ++ GL 
Sbjct: 257 HG-------CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +A +M++   L+  M++ G  P+AV   ++  G
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 10/378 (2%)

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           YTY  L+  +C   ++  A++   EM     + P    +   +  LCK G++  A     
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
           +M      P++  +N LI G CKAG L EA  +  EME+   + ++ TYN LI GL   G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTF 367
           +   A  ++Q M       +  TYN++I G+CK G++++A     +M ++ G  P+  T+
Sbjct: 139 RSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           S LI+G CK+ N+  A  L  EM+  K     VV F  L+DG  K  ++     L   ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P V T S++I GL + G +           +K     C P+ V Y  ++  LC  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALL----EKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++++A +L   M  D   P+  TY+ +  GL +  ++     LL  +   G V D V  
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371

Query: 547 QVMVRGYQENGDLKSAFR 564
           + ++   ++    ++AF+
Sbjct: 372 ETLLLSVKKRLLDRAAFQ 389



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 14/276 (5%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSV 351
           D +TY +L++  C  G+L+ A  LL++M ++ G+      YN  +   CK G + +A+ V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M +   +P+VVTF++LI G CKAG +D A  +  EM       ++V +  LI+GLS 
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G   E + + + M     TP   T +++IHG  K+G I  A  F LE+  +  G  CSP
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGF-LEEMKQRAG--CSP 190

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT----YTTMLRGLLRAKRMLDV 527
           +   Y+ +I  LC    + KA +L  +M     R D C     + T++ G  +A+ +   
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIG---RKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             LL+ M++ G  PD V    ++ G    GD+   F
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF 283


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 224/426 (52%), Gaps = 7/426 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + LL+ + K   +D V   +  M +CG+  D+ TY ++I+C C     + AL+
Sbjct: 66  LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALS 125

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           +  +M+  G EP VV  + LI+G C  N++  A  +   M E     ++  YN ++DG+C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFC 185

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   VN AL  +  M    ++ + VT+  L+ GLC  G    A      M    + PN+ 
Sbjct: 186 KTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVI 245

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +  LI+   + G   EA     EM +  I PDVFTYN +I GLC  GQ++ A+ +L  M
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM 305

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   +VVTYN+LI+G+CK   +++   +  +M+++G+  + VTF+++I G  +AG  
Sbjct: 306 VTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRP 365

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           DAA  +++ M  +   P++  ++ L+ GL  +  +++ L L++ M ++++   + T + +
Sbjct: 366 DAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IHG+   G + +A + F   + K       P+ V Y  +I   C      KA  L+  M+
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKG----LEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478

Query: 501 SDNLRP 506
            D L P
Sbjct: 479 EDGLLP 484



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 207/417 (49%), Gaps = 7/417 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A++LF  MI     P++V ++ L+  +          S+F +M  CG+  +LYTYN ++
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +  C+ +    AL    +M+    +P+VVT   L++G C+   +  A +    M +    
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            ++ +YN +IDG CK G +  A+ L   ME+  +  D  TYN L+ GLC  G+   A  L
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           ++ M    I+ NV+T+ +LI+ + +EG   +A     +M  + ++P+V T++S+I G C 
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A  +   MV K   PDVV +  LI+G  K   + E  +L +EM +  +     T
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVT 351

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +++I G F+ GR   A   F     +       PN   Y+ ++  LCY+ ++ KA  LF
Sbjct: 352 FNTIIQGYFQAGRPDAAQEIFSRMGSR-------PNIRTYSILLYGLCYNWRVEKALVLF 404

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             M+   +  D  TY  ++ G+     + D   L   +   G+ PD V    M+ G+
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGF 461



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 193/374 (51%), Gaps = 13/374 (3%)

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
           +++ A++ +  M+     P++V F  L+  + K        + F +M   G+  +++ YN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I+  C+      A+S+  +M KF   PDV T + LI G C   ++ GA  L+ KM + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
               +VV YN++IDG+CK G +  AL +  +M   GV  + VT++SL+ G C +G    A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L  +MV++ +VP+V+ FTALI+   ++G   E  + Y+EM+   I P VFT +S+IHG
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 444 LFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           L  +G++  A   L+  + K        C P+ V Y  +I   C   ++ + +KL  +M 
Sbjct: 289 LCMHGQVDEAKQILDLMVTKG-------CFPDVVTYNTLINGFCKTKRVDEGTKLVREMS 341

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L  D  T+ T+++G  +A R      + +   +MG  P+     +++ G   N  ++
Sbjct: 342 QRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRVE 398

Query: 561 SAFRCSEFLKESRI 574
            A    E +++S +
Sbjct: 399 KALVLFESMQKSEM 412



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 190/392 (48%), Gaps = 7/392 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F +M +   +P++  ++ L+    K  + +  +  +H M    +  ++ T+ +++
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           + LC+      A +    M KFG  P++   + LI+G C+   +F A+ L S+ME+    
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV  YN +I G C  G +  A  L  +M ++G+ A+ VTYNSL+ G C  G    A  +
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  + + PNV+TF++LI+   + G    A   Y EM+ + + PDV  + ++I GL  
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G + E  ++   M+     P V T ++LI+G  K  R+        E + +        
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG----LVV 347

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V +  IIQ     G+   A ++FS M S   RP+  TY+ +L GL    R+   ++L 
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLF 404

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             M K  +  D     +++ G    G+++ A+
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAW 436



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 6/275 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++L+      G   +A  + R +   +++P +    AL+N  +++GKF    +FYEEM+
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DV TY  +I   C  G V +A  + D M+ KG  P VV Y  LI+G C   ++ 
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVD 331

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           E   + R M + G+V +  T+N ++ GY +    + A E +  M     +PN+ T+ +L+
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILL 388

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC    +  A   F  M K  +  +I  YN +I G C  GN+ +A  L   +    + 
Sbjct: 389 YGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLE 448

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           PDV TY  +I G C     + A+ L +KM ++G+L
Sbjct: 449 PDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           F+T+I  + + G  + A  ++ ++   P I+  + LL GL    + +     +E M    
Sbjct: 352 FNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  D+ TY ++I   C  G+V  A +LF  +  KG+EP VV YT +I G C +    +A+
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471

Query: 175 SMFRSMRECGVVP 187
            ++R M+E G++P
Sbjct: 472 FLYRKMQEDGLLP 484


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 262/533 (49%), Gaps = 47/533 (8%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALW----VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           N  +++TL+  F + GH +EAL     +YR   V  ++   NALL    ++G      +F
Sbjct: 458 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIH-NALLCSFYREGMIAEAEQF 516

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            + M    +  DV ++  +ID  C +G+V++A +++D M+  G  P +  Y  L+ GLC 
Sbjct: 517 KQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 576

Query: 167 ENKMVEAESMFRSMRE--CGV---------------------------------VPNLYT 191
              +V+A+     + E  C +                                 +P+ YT
Sbjct: 577 GGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT 636

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM- 250
           Y  L+DG+CK   +  AL     ML   L P+ + +  L++GL   G+++AA   F  + 
Sbjct: 637 YTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 696

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G++ +   YN +++G+ K G + E   L   M + E+ P   +YNIL+ G    GQL
Sbjct: 697 CKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQL 756

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT--EKGVEPNVVTFS 368
                L + M KEGI  + VTY  LI G C+ G +E A+    +M   E G++P    + 
Sbjct: 757 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYI 816

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LI+ +C+ G+ID A  L  +M    +VP  V  ++++ GL K G ++E + ++  ++ A
Sbjct: 817 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 876

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P++ T ++L+HGL K  +I +A  F L++  ++ G     + V Y  +I  LC    
Sbjct: 877 GMVPTIATFTTLMHGLCKEFKIDDA--FHLKQLMESCG--LKVDVVTYNVLITGLCNKKC 932

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           I  A  L+ +M+S  L P+  TY T+   +     M D   LL D+   GIVP
Sbjct: 933 ICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 985



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 250/546 (45%), Gaps = 62/546 (11%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG-- 133
           R++ + P   + N L++G   +GK +     + +M+   L   V TY  LID  C  G  
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 134 ------------------DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
                             +V KA  +   M+  GI+P V+ Y+ LI+G+C    + E + 
Sbjct: 386 DEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 445

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   M++ GV+PN   Y  L+  +CK      AL+++ ++    L  N V    L+    
Sbjct: 446 ILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY 505

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G +  A  F  +M++  +  ++  +NC+ID +C+ GN+ EA S+   M +    PD+ 
Sbjct: 506 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 565

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  L++GLC  G L  A+  +  + ++    +  T N+L+ G CK G +++AL +C +M
Sbjct: 566 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 625

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             + + P+  T++ L+DG CK G I  A+ L   M+ K LVPD + +T L++GL  +G +
Sbjct: 626 VTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 685

Query: 416 K------------------------------------ETLRLYKEMLEAKITPSVFTVSS 439
           K                                    E  RL + M E ++ PS  + + 
Sbjct: 686 KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 745

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+HG  K G++S  L  +    D    G   P++V Y  +I  LC  G I  A K    M
Sbjct: 746 LMHGYIKKGQLSRTLYLY---RDMVKEGI-KPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 801

Query: 500 --RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
                 L+P +  Y  ++    R   +     L  DM  +G+VP  V    +VRG  + G
Sbjct: 802 VLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 861

Query: 558 DLKSAF 563
            ++ A 
Sbjct: 862 KVEEAI 867



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 243/490 (49%), Gaps = 3/490 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   +AL+NG+ K G      E    M   G++ + V Y  L+   C  G   +AL  
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F ++   G+    VI+  L+     E  + EAE   + M    +  ++ ++N ++D YC+
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 541

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V  A   Y  M+ H   P++ T+G L+ GLC+ G L  A  F V++ +     +   
Sbjct: 542 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 601

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N L+ G CK G L EA+ LC +M    I PD +TY IL+ G C  G++  A  LLQ M 
Sbjct: 602 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMML 661

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVEPNVVTFSSLIDGQCKAGNI 380
           ++G++ + + Y  L++G   EG ++ A  +  ++  ++G+  + + ++S+++G  K G I
Sbjct: 662 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 721

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           +    L   M    + P    +  L+ G  K G +  TL LY++M++  I P   T   L
Sbjct: 722 NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 781

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL + G I  A+ F LEK    + G   P H  Y A+I A C  G I  A +L  DM+
Sbjct: 782 IFGLCEYGLIEIAVKF-LEKMVLEESGL-QPKHTHYIALINAKCRVGDIDGAFELKEDMK 839

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +  + P     ++++RGL +  ++ + +++ + +++ G+VP       ++ G  +   + 
Sbjct: 840 ALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKID 899

Query: 561 SAFRCSEFLK 570
            AF   + ++
Sbjct: 900 DAFHLKQLME 909



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 278/628 (44%), Gaps = 101/628 (16%)

Query: 50  FNPSVFSTLIIAFSEMG-HIEEALWVYRKIEV---LPA-IQACNALLNGLIKKGKFDSVW 104
           F  S+FS   I  + +G +  E +W++ K  +    P  +  CN +LN L  +GK     
Sbjct: 191 FKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAE 250

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              ++M  C L  + VTY  +++    +G    AL + D+M   GIE  +  Y I+I  L
Sbjct: 251 SMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   +   A  + + MRE  + P+  +YN L+ G+     +N A+  +++ML  +L+P+V
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369

Query: 225 VTFGVLMDGLCKVG--------------------ELRAAGNFFVHMAKFGVFPNIFVYNC 264
            T+  L+DG C+ G                    E+  A      M   G+ P++  Y+ 
Sbjct: 370 ATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSA 429

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA----------- 313
           LI+G CK G + E   + S M+K  + P+   Y  L+   C  G  + A           
Sbjct: 430 LINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSG 489

Query: 314 --------EGLLQKMYKEGILA----------------NVVTYNSLIDGYCKEGDMEKAL 349
                     LL   Y+EG++A                +V ++N +ID YC+ G++ +A 
Sbjct: 490 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 549

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQ----------------------------------- 374
           SV   M   G  P++ T+ SL+ G                                    
Sbjct: 550 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 609

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D A+ L  +MV ++++PD   +T L+DG  K G +   L L + MLE  + P  
Sbjct: 610 CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDT 669

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              + L++GL   G++  A   F E   K +G Y   + + Y +++      GQI +  +
Sbjct: 670 IAYTCLLNGLVNEGQVKAASYMFQEIICK-EGLY--ADCIAYNSMMNGYLKGGQINEIER 726

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M  + + P + +Y  ++ G ++  ++   + L  DM+K GI PD V  ++++ G  
Sbjct: 727 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 786

Query: 555 ENGDLKSAFRCSE--FLKESRIGSSETE 580
           E G ++ A +  E   L+ES +    T 
Sbjct: 787 EYGLIEIAVKFLEKMVLEESGLQPKHTH 814



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 49/443 (11%)

Query: 54   VFSTLIIAFSEMGHIEEA--LWVYRKIEVLPAI--QACNALLNGLIKKGKFDSVWEFYEE 109
             + +L+    + GH+ +A    VY  +E   AI  +  N LL G+ K G  D   +  E+
Sbjct: 566  TYGSLLRGLCQGGHLVQAKEFMVYL-LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 624

Query: 110  MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
            MV   ++ D  TY +L+D  C +G ++ AL L   M++KG+ P  + YT L++GL NE +
Sbjct: 625  MVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 684

Query: 170  MVEAESMF------------------------------------RSMRECGVVPNLYTYN 193
            +  A  MF                                    R+M E  V P+  +YN
Sbjct: 685  VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 744

Query: 194  ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-- 251
             LM GY K   ++R L  Y +M+   ++P+ VT+ +L+ GLC+ G +  A  F   M   
Sbjct: 745  ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 804

Query: 252  KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
            + G+ P    Y  LI+  C+ G++  A  L  +M+   + P     + +++GLC  G++E
Sbjct: 805  ESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 864

Query: 312  GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
             A  +   + + G++  + T+ +L+ G CKE  ++ A  +   M   G++ +VVT++ LI
Sbjct: 865  EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 924

Query: 372  DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
             G C    I  A+ LY EM  K L+P++  +  L   +   G M++  +L K++ +  I 
Sbjct: 925  TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 984

Query: 432  PSVFTVSSLIHGLFKNGRISNAL 454
            PS     SL        R+ NA+
Sbjct: 985  PSYKHPESL------EWRMENAI 1001



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 203/424 (47%), Gaps = 25/424 (5%)

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           +L++    E K+++A +    M ECG   +L++ N +++    +        F  E L  
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
               +V T  ++++ LC  G+L  A +    M K    PN   YN +++ + K G    A
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
           + +  +MEK  I  D++TYNI+I  LC + +   A  LL++M +  +  +  +YN+LI G
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-- 396
           +  EG +  A+ + +QM  + ++P+V T+++LIDG C+ G  D A  +  EM I  +   
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 397 ------------------PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
                             PDV+ ++ALI+G+ K G + ET  +   M ++ + P+    +
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 463

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +L+    K G    AL +F+   D    G  + N V++ A++ +   +G I +A +    
Sbjct: 464 TLVFYFCKAGHAKEALKYFV---DIYRSGLVA-NSVIHNALLCSFYREGMIAEAEQFKQY 519

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    +  D  ++  ++    +   +L+   +  +M++ G  PD      ++RG  + G 
Sbjct: 520 MSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 579

Query: 559 LKSA 562
           L  A
Sbjct: 580 LVQA 583


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 263/530 (49%), Gaps = 12/530 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALW----VYRKIEVL-PAIQACNALLNGLIKKGKFDSVWE 105
           N  +++TLI  + + G+++ AL     +YR+  V  P I   NALL    ++G       
Sbjct: 433 NDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIH--NALLRAFYREGMITEAEH 490

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F + M    +  + V++  +ID  C +G +++A +++D+M+  G  P V  Y  L+ GLC
Sbjct: 491 FRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLC 550

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
               +V+A+     + +     +  T+NAL+ G CK   ++ AL+   +M+ +N  P++ 
Sbjct: 551 QGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIH 610

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+ G C+ G++  A      M + GV P+   Y CL++G    G +  A  +  E+
Sbjct: 611 TYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI 670

Query: 286 E-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
             K  +  D   YN L+ G    G +   + ++  MY+  +  N  +YN L+ GY K G 
Sbjct: 671 ICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 730

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
             K+L +   M  KG+ P+ VT+  LI G  + G ID A+    +MV++ + PD +VF  
Sbjct: 731 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDI 790

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI   S+   M   LRL+  M    ++PS  T S++I+GL +   +  +     E     
Sbjct: 791 LITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVG 850

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                 PNH  Y A++ A C  G+I +A +L  +M++  + P     ++++RGL R  ++
Sbjct: 851 ----LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKL 906

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            + +++ ++M++ G+VP       ++    +   +  A      ++  R+
Sbjct: 907 EEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRL 956



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 282/599 (47%), Gaps = 72/599 (12%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++T+I  +     I++AL V  ++E   V+P+    +ALLNG  K        + 
Sbjct: 292 PSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDL 351

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             ++   G+  +     +LID  C  G++ KA  +   M++ GI+P VV Y+ LI+G+C 
Sbjct: 352 MVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCR 411

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             KM E + +   M++ G++PN   Y  L+  YCK   V  AL+ + ++    L  N V 
Sbjct: 412 MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVI 471

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+    + G +  A +F  +M++  +  N   +NC+ID +C  G + EA S+  +M 
Sbjct: 472 HNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMV 531

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLL----------------------------- 317
           ++  SP+V TY  L++GLC  G L  A+  +                             
Sbjct: 532 RYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLD 591

Query: 318 ------QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
                 +KM K   L ++ TY  L+ G+C++G +  AL +   M EKGV P+ V ++ L+
Sbjct: 592 EALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLL 651

Query: 372 DGQCKAGNIDAAMGLYTEMVIKS-LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +G    G + AA  ++ E++ K  L  D + + +L++G  K GN+    R+  +M + ++
Sbjct: 652 NGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEV 711

Query: 431 TPSVFTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDG----------GYCS------- 470
            P+  + + L+HG  K G+ S +L    + + K  + D             C        
Sbjct: 712 YPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVK 771

Query: 471 -----------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                      P+ +++  +I +     ++  A +LF+ M+  +L P + T++ M+ GL+
Sbjct: 772 FLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLI 831

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           R   +     +L +M+++G+ P+      +V      G++  AFR  E +K   I  +E
Sbjct: 832 RKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 890



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 243/497 (48%), Gaps = 13/497 (2%)

Query: 75  YRKIE-VLPAIQAC--------NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +RK E +L  +++C        N +L+  +KKG+F +     E+M    + AD+ TY ++
Sbjct: 171 FRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIM 230

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C      +A  L   M    + P    Y  LI+G   E K+  A  +F  M    +
Sbjct: 231 IDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTL 290

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           VP++ TY  ++DGYC+   +++AL    EM    + P+ +T+  L++G CKV  L  A +
Sbjct: 291 VPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALD 350

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
             V +   G+  N  +   LIDG C+ G + +A  +   M +  I PDV TY+ LI G+C
Sbjct: 351 LMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMC 410

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            + ++   + +L +M K GIL N V Y +LI  YCK G ++ AL     +  +G+  N V
Sbjct: 411 RMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPV 470

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             ++L+    + G I  A      M   ++  + V F  +ID     G + E   +Y +M
Sbjct: 471 IHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDM 530

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +    +P+V T  +L+ GL + G +  A  F     D       + +   + A++  +C 
Sbjct: 531 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPS----AVDEKTFNALLLGICK 586

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G + +A  +   M  +N  PD  TYT +L G  R  ++L  +++L  M++ G+VPD V 
Sbjct: 587 YGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVA 646

Query: 546 NQVMVRGYQENGDLKSA 562
              ++ G    G +K+A
Sbjct: 647 YTCLLNGLINEGQVKAA 663



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 256/498 (51%), Gaps = 14/498 (2%)

Query: 51   NPSVFSTLIIAFSEMGHIEEA-LWVYRKIEVLPAI--QACNALLNGLIKKGKFDSVWEFY 107
            N   +  L+    + GH+ +A  +++  +++  A+  +  NALL G+ K G  D   +  
Sbjct: 538  NVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDIC 597

Query: 108  EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+MV    + D+ TY +L+   C +G ++ AL +   M++KG+ P  V YT L++GL NE
Sbjct: 598  EKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINE 657

Query: 168  NKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             ++  A  +F+ +  +E G+  +   YN+LM+GY K  +VN       +M  + + PN  
Sbjct: 658  GQVKAASYVFQEIICKE-GLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSA 716

Query: 226  TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            ++ +LM G  K G+   +   + +M + G+ P+   Y  LI G  + G +  A+    +M
Sbjct: 717  SYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 776

Query: 286  EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                I PD   ++ILI       ++  A  L   M    +  +  T++++I+G  ++  +
Sbjct: 777  VLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYL 836

Query: 346  EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +++  V  +M + G++PN   + +L++ +C+ G ID A  L  EM    +VP  V  +++
Sbjct: 837  DQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSI 896

Query: 406  IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
            I GL + G ++E + ++  M+ + + P+V T ++L+H L K  +I++AL+       K  
Sbjct: 897  IRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL------KRL 950

Query: 466  GGYC--SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
               C    + V Y  +I  LC D  I  A  L+ +M+S  L P+  TY T+   +    R
Sbjct: 951  MELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGR 1010

Query: 524  MLDVMMLLADMIKMGIVP 541
            M +   LL D+ + G++P
Sbjct: 1011 MQNGEELLEDIEERGLIP 1028



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 206/421 (48%), Gaps = 5/421 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V++ +LI     E K+++A      M +CG   +    N+++    +  +      F  E
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRE 145

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
            L      +V T  +L++ LC  GE R A +    M K     N   YN ++  + K G 
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGR 204

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A+ +  +ME+  I  D++TYNI+I  LC + +   A  LL++M K+ +  +  TYN+
Sbjct: 205 FKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNT 264

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+G+  EG +  A  V + M  + + P+V T++++IDG C+   ID A+ + +EM I  
Sbjct: 265 LINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITG 324

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           ++P  + ++AL++G  K   +   L L  ++    IT +    + LI G  + G IS A 
Sbjct: 325 VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAK 384

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                K+   DG    P+ V Y+A+I  +C   ++ +  ++ S M+   + P++  YTT+
Sbjct: 385 QIL--KSMLEDG--IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +    +A  +   +    D+ + G+V + VI+  ++R +   G +  A    +++    I
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500

Query: 575 G 575
            
Sbjct: 501 S 501



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 189/390 (48%), Gaps = 4/390 (1%)

Query: 55   FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA-C---NALLNGLIKKGKFDSVWEFYEEM 110
            ++ L+      G ++ A +V+++I     + A C   N+L+NG +K G  +++     +M
Sbjct: 647  YTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDM 706

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                +  +  +Y +L+     +G   K+L L+  M+ KGI P  V Y +LI GL     +
Sbjct: 707  YQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 766

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              A      M   G+ P+   ++ L+  + + + ++ AL  ++ M   +L P+  TF  +
Sbjct: 767  DIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAM 826

Query: 231  MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            ++GL +   L  +      M + G+ PN   Y  L++  C+ G +  A  L  EM+   I
Sbjct: 827  INGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 886

Query: 291  SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             P     + +I+GLC  G+LE A  +   M + G++  V T+ +L+   CKE  +  AL 
Sbjct: 887  VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALH 946

Query: 351  VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +   M    ++ +VV+++ LI G CK  +I  A+ LY EM  K L P+V  +  L   + 
Sbjct: 947  LKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMY 1006

Query: 411  KDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
              G M+    L +++ E  + P+   + +L
Sbjct: 1007 STGRMQNGEELLEDIEERGLIPAFKQLENL 1036



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 44/298 (14%)

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEK--FEISPDVFTYNILIKGLCGVGQLEGAEG 315
           N  V+  LI  + K   + +A      M+   F+ SP     N ++K L   G+ +    
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASP--VACNSILKALVEEGESKYVWL 141

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L++        +V T N L++  C  G+  KA  +  +M    +  N  T+++++    
Sbjct: 142 FLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYV 200

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G   AA+ +  +M   S+  D+  +  +ID L +         L K M +  +TP   
Sbjct: 201 KKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI+G            FF E                           G+I  A  +
Sbjct: 261 TYNTLING------------FFGE---------------------------GKINHARCV 281

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           F+ M    L P   TYTTM+ G  R +R+   + +L++M   G++P  +    ++ GY
Sbjct: 282 FNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGY 339


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 251/524 (47%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++      G I +AL V  ++      P     + +L    + G F +     
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   G   D     ++++  C QG V +A+ L  ++   G E  +V Y  ++ GLC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  + E +   M      PN+ T+N L+   C+     R  E   +M  H   P++  +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN ++ G C A    EA  L SEM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M   G + +V+TY ++I+G+CKEG +++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   M+  G +PN V+++ ++ G C AG    A  L ++M+ +   P+ V F  LI+
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG--- 526

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G++ K  ++F +++   +R D   Y  ++  L +       
Sbjct: 527 -ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +   A M+  G +P+     ++++G    G  K A    E L E
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA---QELLSE 626



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  E G ++EA+ + RK+        I + NA+L GL    ++  V E  +EMV      
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M + G  P + +Y  +I G+C E  +  A  + 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN ++ G C       A E   EM   +   + VTF +L+D  C+ 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M   G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC  G+   AE L+ +M ++G   N VT+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  + A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K      A++FF           C PN   Y 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG----CMPNESTYT 605

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G   +A +L S++ S
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCS 629



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 4/447 (0%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C +G +  AL + DEM  KG  P   +Y +++   C       +  +  +M   G   + 
Sbjct: 122 CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDT 181

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
              N +++  C+   V+ A+    ++     + ++V++  ++ GLC              
Sbjct: 182 GNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M +    PNI  +N LI   C+ G       + ++M +   +PD+  Y  +I G+C  G 
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE A  +L +M   G+  NVV YN+++ G C     ++A  + S+M +K    + VTF+ 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+D  C+ G +D  + L  +M+    +PDV+ +T +I+G  K+G + E + L K M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  + + ++ GL   GR  +A     +   +     C PN V +  +I  LC  G +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG----CPPNPVTFNTLINFLCKKGLV 477

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +L   M  +   PD  +Y+T++ GL +A +  + + LL  M+  GI P+ +I   +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGS 576
                  G +    +  + +K++ I S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRS 564



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  V YTI++ GLC+  + V+AE +   M + G  PN  T+N L++  CK   V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC   + + A      M   G + 
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG  ++A  + S++  +G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 230/447 (51%), Gaps = 12/447 (2%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM- 180
           Y  +I+  C  G V +A  L DEM ++G++  V++++ LI GLC + ++ EA   F+SM 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM-----LHHNLQPNVVTFGVLMDGLC 235
            EC   PN+ TYN +++G CK   ++  LE + +M       H  +P+V+++  ++D LC
Sbjct: 62  EECS--PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K   +  A  +F  M   G  PN+  Y+ LIDG CK   + EA SL  +++  ++ P   
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN ++ G    G+      LL  M ++G   N++ +N+++    K  + EKA     ++
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + G +PNVVT++  + G CKAG +D A  +  EMV   + PDV+ ++++IDG  K G M
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +   ++  M+  +  P   T  +L+HG  ++ +   A   F    D  + G+  P    
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA---FRVHEDMVNAGFI-PGLQT 355

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  ++  +C    +  A +++  M+    +PD  TY  +++ L RA+R+ +    L  M 
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSA 562
              +VP+  I   +V    + G++  A
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEA 442



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 244/479 (50%), Gaps = 15/479 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
             ++NG  K G+ D  +E  +EM   G+  DV+ +  LI   C +G + +AL  F  M +
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE-----CGVVPNLYTYNALMDGYCKV 202
           +   P V+ Y  +++GLC  N++ E   +F  M +      G  P++ +Y+ ++D  CK 
Sbjct: 63  E-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             V++A E++  M      PNVVT+  L+DGLCKV  +  A +  + +    + P    Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N +++G  + G   E + L   M++     ++  +N ++  L    + E A    +++ K
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   NVVTYN  + G CK G +++A  +  +M E  V P+V+T+SS+IDG CKAG +D 
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  ++T M++   +P  V F  L+ G S+    +E  R++++M+ A   P + T + L+ 
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            +     + +AL  + +   K       P+   YA +IQ LC   ++ +A +    M +D
Sbjct: 362 CVCGADSVESALEIYHKMKRKKR----QPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV--PD---AVINQVMVRGYQEN 556
           N+ P+      ++  L +   + +   +L +++++     PD    VI Q++++G + +
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPD 476



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 230/517 (44%), Gaps = 22/517 (4%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI--EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           K +  + STLI      G I+EAL  ++ +  E  P +   N ++NGL K  + D   E 
Sbjct: 31  KMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLEL 90

Query: 107 YEEM-----VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
           +++M        G   DV++Y  +ID  C    V KA   F  M   G  P VV Y+ LI
Sbjct: 91  FDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLI 150

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            GLC  +++ EA S+   ++   +VP    YNA+++G+ +    +  LE    M      
Sbjct: 151 DGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFG 210

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
            N++ F  ++  L K  E   A  FF  + K G  PN+  YN  + G CKAG + EA  +
Sbjct: 211 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRI 270

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM + +++PDV TY+ +I G C  G+++ A+ +  +M     + + VT+ +L+ G+ +
Sbjct: 271 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 330

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
                +A  V   M   G  P + T++ L+D  C A ++++A+ +Y +M  K   PD   
Sbjct: 331 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANT 390

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +  LI  L +   + E       M    + P+     +L+  L K G +  A +      
Sbjct: 391 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 450

Query: 462 DKTDGGY---------------CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           +    G                  P+   Y A++++LC   ++  A   F  M S    P
Sbjct: 451 EICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAP 510

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              TYT ++     A    D   +   M+  G  P A
Sbjct: 511 GLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQA 547



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 202/420 (48%), Gaps = 22/420 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S+LI    ++  ++EA  +  ++   +++P     NA++NG  ++GK     E  
Sbjct: 142 NVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELL 201

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M   G   +++ +  ++       +  KA   F+ ++  G +P VV Y + +HGLC  
Sbjct: 202 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 261

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA  +   M E  V P++ TY++++DG+CK   +++A + +  M+ H   P+ VTF
Sbjct: 262 GKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 321

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G  +  + R A      M   G  P +  YN L+D  C A ++  A+ +  +M++
Sbjct: 322 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 381

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +  PD  TY  LI+ LC   +++ A+  L  M  + ++ N    ++L++  CK+G++++
Sbjct: 382 KKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 441

Query: 348 ALSV-------------------CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           A SV                     QM  KGV P+  T+ +++   C    +D+A+  + 
Sbjct: 442 ACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFE 501

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           +M  +   P +V +T LI          +  R+++ M+ A  TP   T+ +L   L   G
Sbjct: 502 KMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 14/348 (4%)

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  +++G CK G++  A      M + GV  ++ +++ LI G C+ G + EA+     M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-----GILANVVTYNSLIDGYCK 341
           + E SP+V TYN ++ GLC   +++    L   M K      G   +V++Y+++ID  CK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
              ++KA     +M   G  PNVVT+SSLIDG CK   +D A  L  ++  + +VP  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LE 459
           + A+++G  + G   E L L   M E     ++   ++++H L+KN     A  FF  L 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
           K+ K       PN V Y   +  LC  G++ +A ++  +M    + PD  TY++++ G  
Sbjct: 241 KSGK------KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           +A RM     +   M+    +P  V    ++ G+ E+   + AFR  E
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 10/283 (3%)

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  +I G C  GQ++ A  LL +M + G+  +V+ +++LI G C++G +++AL     M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK-----SLVPDVVVFTALIDGLSK 411
           E+   PNV+T++++++G CKA  ID  + L+ +M  +        PDV+ ++ +ID L K
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              + +    +K M      P+V T SSLI GL K  R+  A +  ++      G    P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQ----LKGEDMVP 176

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
             + Y A++      G+  +  +L   M+      +   +  ML  L +           
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 236

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             ++K G  P+ V   V V G  + G +  A+R    + ES++
Sbjct: 237 ERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV 279



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 2/210 (0%)

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++++I+G CKAG +D A  L  EM  + +  DV++ + LI GL + G + E L  +K M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY-CSPNHVLYAAIIQALCY 485
           E + +P+V T +++++GL K  RI   L  F +   + +  + C P+ + Y+ +I ALC 
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
             ++ KA + F  MR+    P+  TY++++ GL +  R+ +   LL  +    +VP A+ 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
              +V G++  G           +KE   G
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFG 210


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 268/576 (46%), Gaps = 55/576 (9%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA----LWVYRKIEVLPAIQACNALLN 92
           S+F  +N +    +  + F+  + A        EA    L   + + +LP I + N L+N
Sbjct: 139 SLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLIN 198

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE- 151
            L+K  + D     +      GL+ +  TY ++I   C +GD    + +FDEM + G++ 
Sbjct: 199 RLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDD 258

Query: 152 -----PTVV-----------------------------IYTILIHGLCNENKMVEAESMF 177
                 T +                              YT +I G CNE K+ EAES+F
Sbjct: 259 DSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVF 318

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M + G+VP++Y Y AL+ GYC   + ++AL  Y  M+   ++ N V F  ++  L ++
Sbjct: 319 LEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEM 378

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G      + F    + G+F +   YN L D  CK G + +A+ +  E++  ++  D+  Y
Sbjct: 379 GRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHY 438

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI G    G+   A+ L ++M + G   +VV YN L  G+ +     +A+ + + M  
Sbjct: 439 TTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMES 498

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG------LSK 411
           +GVEPN  T   +I+G C AG ++ A   +  +  +S+   V ++TAL++G      + K
Sbjct: 499 QGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEK 558

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGY 468
              +KE   L + MLE  + PS    S +   L  NG +  A    N F+        G+
Sbjct: 559 SHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHT------GF 612

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ V Y  +I   C    + +A +LF DM+   + PD  TYT M+ G  +   + +  
Sbjct: 613 -TPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAH 671

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            L  DM + GI PD +   V+++G   +G  + AF+
Sbjct: 672 ELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQ 707



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 13/390 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVY-----RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           V+  L+  +    + ++AL VY     R I+    I +C  +L+ L + G+   V + +E
Sbjct: 332 VYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC--ILHCLDEMGRALEVVDMFE 389

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E    GL  D   Y +L D  C  G V  A+ + DE+    ++  +  YT LI+G   + 
Sbjct: 390 EFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQG 449

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K +EA+S+F+ M E G  P++  YN L  G+ +      A++  + M    ++PN  T  
Sbjct: 450 KPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHK 509

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NLFEAMSLC 282
           ++++GLC  G++  A  FF  +    V  ++ +Y  L++G+C+A        L EA  L 
Sbjct: 510 IIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILL 569

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M +  + P    Y+ +   LC  G +EGA  L       G   + VTY  +I+GYCK 
Sbjct: 570 RTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKT 629

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             + +A  +   M E+G+ P+ VT++ +I+G CK   +  A  L+ +M  + + PDV+ +
Sbjct: 630 NCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAY 689

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           T +I GL   G+ +   +LY EM++  +TP
Sbjct: 690 TVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 197/441 (44%), Gaps = 43/441 (9%)

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           S++G+    L  YR         A  A++ G   + K D     + EM   GLV DV  Y
Sbjct: 276 SDLGY--AVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVY 333

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             L+   C   +  KAL ++  MI +GI+   VI++ ++H L    + +E   MF   +E
Sbjct: 334 CALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKE 393

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
            G+  +   YN L D  CK+  V+ A+    E+    L  ++  +  L++G    G+   
Sbjct: 394 SGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIE 453

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           A + F  M + G  P++  YN L  G  +    FEAM L + ME   + P+  T+ I+I+
Sbjct: 454 AQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIE 513

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--------------------- 341
           GLC  G++E AE     +  E +  +V  Y +L++GYC+                     
Sbjct: 514 GLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTML 573

Query: 342 --------------------EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
                                G+ME A ++ +     G  P+ VT++ +I+G CK   + 
Sbjct: 574 EMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLP 633

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+ +M  + + PD V +T +I+G  K   ++E   L+K+M E  I P V   + +I
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693

Query: 442 HGLFKNGRISNALNFFLEKTD 462
            GL  +G    A   + E  D
Sbjct: 694 KGLLNSGHTEIAFQLYNEMID 714



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 208/476 (43%), Gaps = 30/476 (6%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           T+ +L      Q +   A + F ++ ++ G    +  YT +I  LC  N   + +S+F  
Sbjct: 61  TFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLD 120

Query: 180 MRECGVVPNLYTYNALMDG-YCKVADVNR----------------ALEFYHEMLHHNLQ- 221
           + +       +  N L D  +  V DVN                 +   + E +   LQ 
Sbjct: 121 IIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQT 180

Query: 222 -------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
                  PN+++F  L++ L K  E+  A   FV    FG+  N + Y  +I   CK G+
Sbjct: 181 RKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGD 240

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
               + +  EM++  +  D + Y   I+GLC   + +    +LQ         +   Y +
Sbjct: 241 WENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTA 300

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I G+C E  +++A SV  +M ++G+ P+V  + +L+ G C + N D A+ +Y  M+ + 
Sbjct: 301 VIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRG 360

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  + V+F+ ++  L + G   E + +++E  E+ +       + L   L K G++ +A+
Sbjct: 361 IKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAV 420

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                  D+        +   Y  +I      G+ ++A  LF +M     +PD   Y  +
Sbjct: 421 GML----DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVL 476

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
             G  R +   + M LL  M   G+ P++  +++++ G    G ++ A     +LK
Sbjct: 477 AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLK 532



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 28/277 (10%)

Query: 14  ARCLIKDVTENLLKSRKPHHVCYSVFNA--------------LNSLEIPKFNPSVFSTLI 59
           A+ L K++ E   +  KP  V Y+V  A              LN +E     P+  +  I
Sbjct: 454 AQSLFKEMEE---RGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKI 510

Query: 60  I--AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           I       G +EEA   +  ++   V  +++   AL+NG  +    +   E  E  +L  
Sbjct: 511 IIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLR 570

Query: 115 LVADV------VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            + ++      V Y  +    C  G++  A  LF+  I  G  P  V YTI+I+G C  N
Sbjct: 571 TMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTN 630

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + EA  +F+ M+E G+ P+  TY  +++GYCK+  +  A E + +M    ++P+V+ + 
Sbjct: 631 CLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYT 690

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           V++ GL   G    A   +  M   G+ P   +  C+
Sbjct: 691 VIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCI 727


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 212/409 (51%), Gaps = 8/409 (1%)

Query: 48  PKFNPSVFS-----TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDS 102
           P+  PS  S       ++    +   E+A     +  V P I   N +++GL + G+   
Sbjct: 150 PRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRK 209

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCC---GQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
             +  +++   GL   V TY  LID  C   G G++     L  EM++ GI PT V + +
Sbjct: 210 AGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+G C  +    A  +F  M++ G+  ++ TYN+L+ G C    V   ++   EM    
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L PN +TFG ++ G CK G +  A ++   M +  V P++ +YN LID + + G + +AM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           ++   M K  ISP+V TYN LI G    G    A GLL +M ++GI A+VVTYN LI   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C +G++ KA+ +  +M+E G+EPN +T++++I G C  GNI +A  + T M       +V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           V +   I    + G M E   L  EML+  + P+  T  ++  G+ + G
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 184/335 (54%), Gaps = 7/335 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  + NAL+ G      V+ A + +   L   + P++ TF  ++ GLC++G+LR AG+ 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              +  +G+ P++  YN LIDG+CK   AGN++    L  EM +  ISP   T+ +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C       A  + ++M ++GI A+VVTYNSLI G C EG +E+ + +  +M + G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            +TF  ++ G CK G +  A      M  +++ PDVV++  LID   + G M++ + + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M +  I+P+V T + LI G  ++G   +A     E  +K        + V Y  +I AL
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG----IEADVVTYNVLIGAL 449

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           C  G++ KA KL  +M    L P++ TY T+++G 
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 196/409 (47%), Gaps = 7/409 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  + NALL GL+   + D   + +   +   +  D+ T+  +I   C  G + KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN---KMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             ++   G+ P+V  Y  LI G C +     M   + + + M E G+ P   T+  L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCK ++   A+  + EM    +  +VVT+  L+ GLC  G++         M   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              + C++ G CK G + +A      M +  + PDV  YNILI     +G++E A  + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M K+GI  NV TYN LI G+ + GD   A  +  +M EKG+E +VVT++ LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ L  EM    L P+ + +  +I G    GN+K    +   M + +   +V T +
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I    + G++  A +   E  DK       PN + Y  I + +   G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKC----LVPNGITYETIKEGMMEKG 558



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 12/380 (3%)

Query: 202 VADVNRALEFYHEML-----HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +A  ++ L  Y   L     H   +P+  +   L+ GL     +  A   F    +  V 
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGA 313
           P+I+ +N +I G C+ G L +A  +  +++ + ++P V TYN LI G C   G G +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + LL++M + GI    VT+  LI+GYCK  +   A+ V  +M ++G+  +VVT++SLI G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ++  + L  EM    L P+ + F  ++ G  K G M +       M E  + P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V   + LI    + G++ +A+        K      SPN   Y  +I      G    AS
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKG----ISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M+   +  D  TY  ++  L     +   + LL +M ++G+ P+ +    +++G+
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 554 QENGDLKSAFRCSEFLKESR 573
            + G++KSA+     +++ R
Sbjct: 485 CDKGNIKSAYEIRTRMEKCR 504



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 7/286 (2%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P   + N L+ GL G  +++ AE   +   +  +  ++ T+N++I G C+ G + KA  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCK---AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
              +   G+ P+V T++SLIDG CK   AGN+     L  EMV   + P  V F  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K+ N    +R+++EM +  I  SV T +SLI GL   G++   +    E  D      
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG---- 329

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SPN + +  +++  C  G +  A+     M   N+ PD   Y  ++    R  +M D M
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +   M K GI P+      ++ G+  +GD +SA    + +KE  I
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 7/252 (2%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           + N+L+ G      ++ A         + V P++ TF+++I G C+ G +  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 391 VIKSLVPDVVVFTALIDGLSKDG---NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
               L P V  + +LIDG  K G   NM     L KEM+EA I+P+  T   LI+G  KN
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
              + A+  F E   +      + + V Y ++I  LC +G++ +  KL  +M    L P+
Sbjct: 278 SNTAAAVRVFEEMKQQG----IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T+  +L+G  +   M D    +  M +  + PD VI  +++  Y+  G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 568 FLKESRIGSSET 579
            + +  I  + T
Sbjct: 394 AMAKKGISPNVT 405


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 216/416 (51%), Gaps = 7/416 (1%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A NA++ G    G+ D+      EM    +  D  TY  LI   CG+G    AL + DEM
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           + +   P VV YTIL+   C  +   +A  +   MR+ G  P++ TYN +++G C+   V
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + A+EF   +  +  +PN V++ +++ GLC       A      M + G  PN+  +N L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I   C+ G +  A+ +  ++ K+  +P+  +YN L+   C   +++ A   L  M   G 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             ++V+YN+L+   C+ G+++ A+ +  Q+ +KG  P +++++++IDG  KAG    A+ 
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  EMV K L PD++ ++ +  GL ++  +++ +R + ++ +  I P+    +++I GL 
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           K     +A++ F        G  C PN   Y  +I+ L Y+G I +A  L  ++ S
Sbjct: 359 KRRETHSAIDLFAYMI----GNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 209/406 (51%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++ ++  +   G ++ A  +  ++ V P     N L+ GL  +G+  +     +EM+  
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
             V DVVTY +L++  C +    +A+ L DEM DKG  P +V Y ++++G+C E ++ +A
Sbjct: 62  RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
               +++   G  PN  +YN ++ G C       A E   EM      PNVVTF +L+  
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G +  A      + K+G  PN   YN L+   CK   + +AM+    M      PD
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 241

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + +YN L+  LC  G+++ A  LL ++  +G    +++YN++IDG  K G  ++AL + +
Sbjct: 242 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 301

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M  KG++P+++T+S++  G C+   I+ A+  + ++    + P+ V++ A+I GL K  
Sbjct: 302 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 361

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                + L+  M+     P+  T + LI GL   G I  A +   E
Sbjct: 362 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 407



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 7/406 (1%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  ++ G C   ++  A    R + E  V P+ YTYN L+ G C       AL    EML
Sbjct: 3   YNAMVAGYCGAGQLDAAR---RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P+VVT+ +L++  CK    + A      M   G  P+I  YN +++G C+ G + 
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A+     +  +   P+  +YNI++KGLC   + E AE L+ +M ++G   NVVT+N LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
              C++G +E AL V  Q+ + G  PN ++++ L+   CK   +D AM     MV +   
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD+V +  L+  L + G +   + L  ++ +    P + + +++I GL K G+   AL  
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
             E   K       P+ + Y+ I   LC + +I  A + F  ++   +RP+   Y  ++ 
Sbjct: 300 LNEMVSKG----LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           GL + +     + L A MI  G +P+     +++ G    G +K A
Sbjct: 356 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 3/375 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G    AL V  ++     +P +     LL    K+  +    +  +EM
Sbjct: 34  TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+VTY V+++  C +G V  A+     +   G EP  V Y I++ GLC   + 
Sbjct: 94  RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 153

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M + G  PN+ T+N L+   C+   V  ALE   ++  +   PN +++  L
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK  ++  A  F   M   G +P+I  YN L+   C++G +  A+ L  +++    
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P + +YN +I GL   G+ + A  LL +M  +G+  +++TY+++  G C+E  +E A+ 
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              ++ + G+ PN V ++++I G CK     +A+ L+  M+    +P+   +T LI+GL+
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393

Query: 411 KDGNMKETLRLYKEM 425
            +G +KE   L  E+
Sbjct: 394 YEGLIKEARDLLDEL 408



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 166/340 (48%), Gaps = 7/340 (2%)

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           + +  ++ G C  G+L AA      M    V P+ + YN LI G C  G    A+++  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M +    PDV TY IL++  C     + A  LL +M  +G   ++VTYN +++G C+EG 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           ++ A+     +   G EPN V+++ ++ G C A   + A  L  EM  K   P+VV F  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           LI  L + G ++  L + +++ +   TP+  + + L+H   K  ++  A+ F     D  
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL----DLM 233

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
               C P+ V Y  ++ ALC  G++  A +L   ++     P   +Y T++ GL +A + 
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + + LL +M+  G+ PD +    +  G      ++ A R
Sbjct: 294 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 148/311 (47%), Gaps = 3/311 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ ++    + G +++A+   + +      P   + N +L GL    +++   E   EM
Sbjct: 104 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 163

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +VVT+ +LI   C +G V  AL + +++   G  P  + Y  L+H  C + KM
Sbjct: 164 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 223

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A +    M   G  P++ +YN L+   C+  +V+ A+E  H++      P ++++  +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G+ + A      M   G+ P+I  Y+ +  G C+   + +A+    +++   I
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+   YN +I GLC   +   A  L   M   G + N  TY  LI+G   EG +++A  
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403

Query: 351 VCSQMTEKGVE 361
           +  ++  +  E
Sbjct: 404 LLDELCSRAGE 414



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 7/277 (2%)

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             YN ++ G CG GQL+ A  L+ +M  E    +  TYN+LI G C  G    AL+V  +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M  +   P+VVT++ L++  CK      AM L  EM  K   PD+V +  +++G+ ++G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + + +   K +      P+  + + ++ GL    R  +A     E   K     C PN V
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG----CPPNVV 173

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            +  +I  LC  G +  A ++   +      P++ +Y  +L    + K+M   M  L  M
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +  G  PD V    ++     +G++  A      LK+
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 270


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 251/524 (47%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++      G I +AL V  ++      P     + +L    + G F +     
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   G   D     ++++  C QG V +A+ L  ++   G E  +V Y  ++ GLC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  + E +   M      PN+ T+N L+   C+     R  E   +M  H   P++  +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN ++ G C A    EA  L SEM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M   G + +V+TY ++I+G+CKEG +++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   M+  G +PN V+++ ++ G C AG    A  L ++M+ +   P+ V F  LI+
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG--- 526

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G++ K  ++F +++   +R D   Y  ++  L +       
Sbjct: 527 -ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +   A M+  G +P+     ++++G    G  K A    E L E
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA---QELLSE 626



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  E G ++EA+ + RK+        I + NA+L GL    ++  V E  +EMV      
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M + G  P + +Y  +I G+C E  +  A  + 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN ++ G C       A E   EM   +   + VTF +L+D  C+ 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M   G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC  G+   AE L+ +M ++G   N VT+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  + A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K      A++FF           C PN   Y 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG----CMPNESTYT 605

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G   +A +L S++ S
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCS 629



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 4/447 (0%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C +G +  AL + DEM  KG  P   +Y +++   C       +  +  +M   G   + 
Sbjct: 122 CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDT 181

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
              N +++  C+   V+ A+    ++     + ++V++  ++ GLC              
Sbjct: 182 GNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M +    PNI  +N LI   C+ G       + ++M +   +PD+  Y  +I G+C  G 
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE A  +L +M   G+  NVV YN+++ G C     ++A  + S+M +K    + VTF+ 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+D  C+ G +D  + L  +M+    +PDV+ +T +I+G  K+G + E + L K M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  + + ++ GL   GR  +A     +   +     C PN V +  +I  LC  G +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG----CPPNPVTFNTLINFLCKKGLV 477

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +L   M  +   PD  +Y+T++ GL +A +  + + LL  M+  GI P+ +I   +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGS 576
                  G +    +  + +K++ I S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRS 564



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  V YTI++ GLC+  + V+AE +   M + G  PN  T+N L++  CK   V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC   + + A      M   G + 
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG  ++A  + S++  +G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 254/514 (49%), Gaps = 17/514 (3%)

Query: 64  EMGHIEEA--LWVYRKIEVLP-AIQACNALLN-GLIKKGKFDSVWEFYEEMVLC--GLVA 117
           E G + EA  + +  +   LP  ++  N +L  GL   G F    E ++ M     G+  
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D  ++  L+  CC +G   +A  L   M  +G        T+++   C + +      +F
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
           R M E G  PN+  Y+A +DG C+   V +A     EM+   L+PNV T   L+DGLCK+
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 238 GELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           G +  A   F+ + K   + PN+  Y  +I G+CK G L  A  L   M +  ++P+  T
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G  + A  L+ KM  EG L N+ TYN++I G+CK+G +++A  V    T
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            +G+  + VT++ LI   CK G+I  A+ L+ +M  KS  PD+  +T +I    +   M+
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQME 479

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           ++ +L+ + L   + P+  T +S+I G  + G++++AL  F    ++     C P+ + Y
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVF----ERMVQHGCLPDSITY 535

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            A+I +LC + ++ +A  LF  M   +L P + T  T+     R  ++   +  L  + K
Sbjct: 536 GALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDK 595

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
                 A     +VR     G+L +A   S FLK
Sbjct: 596 R---QQAHTADALVRKLSTVGNLDAA---SLFLK 623



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 16/437 (3%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + ++ AF   G       ++R++  +   P +   +A ++GL ++G     +   EEMV 
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVG 279

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMV 171
            GL  +V T+  LID  C  G + +A  LF +++     +P V  YT++I G C E K+ 
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +   M E G+ PN  TY  L+ G+CK    +RA E  ++M      PN+ T+  ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G CK G+++ A          G+  +   Y  LI  HCK G++  A+ L  +M +    
Sbjct: 400 GGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCH 459

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TY  +I   C   Q+E ++ L  K    G++    TY S+I GYC+ G +  AL V
Sbjct: 460 PDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKV 519

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             +M + G  P+ +T+ +LI   CK   ++ A  L+  M+ K LVP DV   T   +   
Sbjct: 520 FERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCR 579

Query: 411 KDGNMKETLRL-YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
           +D   K T+ + + + L+ +      T  +L+  L   G +  A  F     DK    + 
Sbjct: 580 RD---KITIAVSFLDRLDKR--QQAHTADALVRKLSTVGNLDAASLFLKNVLDK----HY 630

Query: 470 SPNHVLYAAIIQALCYD 486
           + +H  Y + I + CY+
Sbjct: 631 AVDHATYTSFINS-CYE 646


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 243/497 (48%), Gaps = 46/497 (9%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           E G     L   R+  ++P + + N ++ G  +  + +   E   EM   G    +VT+G
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
           +LID  C  G + +A+    EM   G+E  +V+YT LI G C+  ++   +++F  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P   TYN L+ G+CK+  +  A E +  M+   ++PNV T+  L+DGLC VG+ + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M +    PN   YN +I+  CK G + +A+ +   M+K    PD  TYNIL+ G
Sbjct: 337 LQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 304 LCGVGQLEGAEGLLQKMYKEGILAN--VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           LC  G L+ A  LL  M K+    +  V++YN+LI G CKE  + +AL +   + EK   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
            + VT + L++   KAG+++ AM L+ ++    +V +   +TA+IDG  K G +     L
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
             +M  +++ PSVF                                        Y  ++ 
Sbjct: 517 LCKMRVSELQPSVFD---------------------------------------YNCLLS 537

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           +LC +G + +A +LF +M+ DN  PD  ++  M+ G L+A  +     LL  M + G+ P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 542 D-----AVINQVMVRGY 553
           D      +IN+ +  GY
Sbjct: 598 DLFTYSKLINRFLKLGY 614



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 263/560 (46%), Gaps = 47/560 (8%)

Query: 50  FNPSVFSTLIIAFSEM------------GHIEEALWVYRK-IEVLPAIQ-ACNALLNGLI 95
            NP V+S L+ AFSE               ++ A+ V+++ ++   ++  A + L+  L+
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMAKLV 83

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           +    +  + FY +M+      + V+   L++C         A  +   M+ +G    V 
Sbjct: 84  RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            + IL+ GLC   +  +A S+ R MR   ++P++++YN ++ G+C+  ++ +ALE  +EM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                  ++VT+G+L+D  CK G++  A  F   M   G+  ++ VY  LI G C  G L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
               +L  E+ +   SP   TYN LI+G C +GQL+ A  + + M + G+  NV TY  L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDG C  G  ++AL   + M EK  EPN VT++ +I+  CK G +  A+ +   M  +  
Sbjct: 324 IDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLE--AKITPSVFTVSSLIHGLFKNGRISNA 453
            PD + +  L+ GL   G++ E  +L   ML+  +   P V + ++LIHGL K  R+  A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 454 LNFFLEKTDKTDGGYCSPNHVL-------------------------------YAAIIQA 482
           L+ +    +K   G     ++L                               Y A+I  
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C  G +  A  L   MR   L+P    Y  +L  L +   +     L  +M +    PD
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 543 AVINQVMVRGYQENGDLKSA 562
            V   +M+ G  + GD+KSA
Sbjct: 564 VVSFNIMIDGSLKAGDIKSA 583



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 234/495 (47%), Gaps = 51/495 (10%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE--- 79
           LLK    +  C    + L  +      P VFS  T+I  F E   +E+AL +  +++   
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID--CCCGQGDVMK 137
              ++     L++   K GK D    F +EM   GL AD+V Y  LI   C CG+ D  K
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  FDE++++G  P  + Y  LI G C   ++ EA  +F  M E GV PN+YTY  L+D
Sbjct: 268 AL--FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C V     AL+  + M+  + +PN VT+ ++++ LCK G +  A      M K    P
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCG--------- 306
           +   YN L+ G C  G+L EA  L   M K      PDV +YN LI GLC          
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 307 --------------------------VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
                                      G +  A  L +++    I+ N  TY ++IDG+C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           K G +  A  +  +M    ++P+V  ++ L+   CK G++D A  L+ EM   +  PDVV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            F  +IDG  K G++K    L   M  A ++P +FT S LI+   K G +  A++FF   
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF--- 622

Query: 461 TDK-TDGGYCSPNHV 474
            DK  D G+    H+
Sbjct: 623 -DKMVDSGFEPDAHI 636



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 196/419 (46%), Gaps = 44/419 (10%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYE 108
           V+++LI  F + G ++    ++   EVL     P     N L+ G  K G+     E +E
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFD--EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M+  G+  +V TY  LID  CG G   +AL   + MI+K  EP  V Y I+I+ LC + 
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 169 KMVEAESMFRSMRE-----------------CG--------------------VVPNLYT 191
            + +A  +   M++                 C                       P++ +
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           YNAL+ G CK   +++AL+ Y  ++      + VT  +L++   K G++  A   +  ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
              +  N   Y  +IDG CK G L  A  L  +M   E+ P VF YN L+  LC  G L+
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  L ++M ++    +VV++N +IDG  K GD++ A S+   M+  G+ P++ T+S LI
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           +   K G +D A+  + +MV     PD  +  +++      G   +   L K++++  I
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 4/261 (1%)

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A G+L  M K G   NV  +N L+ G C+  +  KA+S+  +M    + P+V +++++I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C+   ++ A+ L  EM        +V +  LID   K G M E +   KEM    +  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +   +SLI G    G +      F E  ++ D    SP  + Y  +I+  C  GQ+ +A
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGD----SPCAITYNTLIRGFCKLGQLKEA 301

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           S++F  M    +RP+  TYT ++ GL    +  + +  L  MI+    P+AV   +++  
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINK 361

Query: 553 YQENGDLKSAFRCSEFLKESR 573
             ++G +  A    E +K+ R
Sbjct: 362 LCKDGLVADAVEIVELMKKRR 382



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 5/263 (1%)

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           QL+ A  + Q+    G        N L+    +  + E A S   +M E     N V+ S
Sbjct: 53  QLKNAVSVFQQAVDSGSSLAFAGSN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            L++   +      A G+   M+ +    +V     L+ GL ++    + + L +EM   
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P VF+ +++I G  +   +  AL    E  ++  G  CS + V +  +I A C  G+
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKAL----ELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A     +M+   L  D   YT+++RG      +     L  ++++ G  P A+    
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 549 MVRGYQENGDLKSAFRCSEFLKE 571
           ++RG+ + G LK A    EF+ E
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIE 310


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 256/567 (45%), Gaps = 88/567 (15%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R   ++P +   N L+      G    VW+ Y EM+ CG++ +V T+ +L+   C  G +
Sbjct: 3   RTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHL 62

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNE----------NKMVEAESMFRSMRECGV 185
             AL+L   +    I+   V Y   I G C +          + MV+ ++ F S   C +
Sbjct: 63  SLALDLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSF-TCNI 118

Query: 186 V----------------------------------PNLYTYNALMDGYCKVADVNRALEF 211
           +                                  PNL TY  L+  YCK   ++ AL  
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y EM+     P+VVT+  +++GLCK G L  A      M K GV PN  VY  L+D   K
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 272 AGNLFEAMSLCSEM-----------------------------------EKFEISPDVFT 296
           AG+ +E+    S+M                                    K    P+  T
Sbjct: 239 AGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNIT 298

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  +I G C +G ++GAE LL+ M K+ ++ NVVTY+S+I+GY K+G ++ A+ +  +M 
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ + PN   +++LIDG  KAG  DAA+ LY EM +  L  +  +  A I+ L +   M+
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKME 418

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E   L K M+   +       +SL+ G FK GR S A     EK  +T   +   + V Y
Sbjct: 419 EAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFT-MAEKMAETGIKF---DVVAY 474

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I  L   G+   A  ++S +R   L PD  TY TM+    +  ++ + + L  +M  
Sbjct: 475 NVLINGLLRLGK-YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKG 533

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
             ++P+++   ++V G  + G+ + A 
Sbjct: 534 HSVMPNSITCNILVGGLSKAGETERAI 560



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 250/525 (47%), Gaps = 35/525 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI A+ +   + EAL +Y ++     LP +   ++++NGL K+G         
Sbjct: 155 NLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALL 214

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+  + V Y +L+D     G   ++     +MI  G+   +V+ T LI GL   
Sbjct: 215 REMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKA 274

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K  EAE+MF ++ +   +PN  TY A++DGYCK+ D++ A     +M    + PNVVT+
Sbjct: 275 GKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTY 334

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++G  K G L  A      M    + PN ++Y  LIDGH KAG    A+ L +EM+ 
Sbjct: 335 SSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKL 394

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  + F  +  I  L    ++E AEGL + M  +G+L + V Y SL+DG+ K G    
Sbjct: 395 NGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESA 454

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++  +M E G++ +VV ++ LI+G  + G  DA   +Y+ +    L PD   +  +I+
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAE-SVYSGIRELGLAPDRATYNTMIN 513

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE-------- 459
              K G ++  ++L+ EM    + P+  T + L+ GL K G    A++   E        
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 460 -------------KTDKTD----------GGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
                        K ++ D          G     N  +Y ++I  LC  G   +A+ + 
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           ++M  + +  D  TY  ++ G  ++  +   +     M+  G+ P
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSP 678



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 266/544 (48%), Gaps = 50/544 (9%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF--- 106
           P+VF+   L+ A+ +MGH+  AL + R +++       N  + G  ++G  +  + F   
Sbjct: 44  PNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSI 103

Query: 107 ---------------------------YEEMVLCGLVAD-------------VVTYGVLI 126
                                      Y E V+  L+ D             +VTY  LI
Sbjct: 104 MVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLI 163

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C Q  + +AL+L++EMI  G  P VV Y+ +I+GLC    + EA+++ R M + GV 
Sbjct: 164 SAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVN 223

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           PN   Y  L+D   K      +  +  +M+   +  ++V    L+DGL K G+   A   
Sbjct: 224 PNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAM 283

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  +AK    PN   Y  +IDG+CK G++  A SL  +MEK ++ P+V TY+ +I G   
Sbjct: 284 FCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTK 343

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G L+ A  +++KM  + I+ N   Y +LIDG+ K G  + A+ + ++M   G+E N   
Sbjct: 344 KGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFI 403

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
             + I+   +   ++ A GL   M+ K L+ D V +T+L+DG  K G       + ++M 
Sbjct: 404 VDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMA 463

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E  I   V   + LI+GL + G+  +A + +   +   + G  +P+   Y  +I A C  
Sbjct: 464 ETGIKFDVVAYNVLINGLLRLGKY-DAESVY---SGIRELGL-APDRATYNTMINAYCKQ 518

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G++  A KL+++M+  ++ P++ T   ++ GL +A      + +L +M+  GI P+  I+
Sbjct: 519 GKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIH 578

Query: 547 QVMV 550
           + ++
Sbjct: 579 RALL 582



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 253/547 (46%), Gaps = 57/547 (10%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           L  +E  +  P+V  +S++I  +++ G ++ A+ + +K+    ++P       L++G +K
Sbjct: 319 LRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLK 378

Query: 97  KGKFDSVWEFYEEMVL-----------------------------C------GLVADVVT 121
            GK D+  + Y EM L                             C      GL+ D V 
Sbjct: 379 AGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVN 438

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L+D     G    A  + ++M + GI+  VV Y +LI+GL    K  +AES++  +R
Sbjct: 439 YTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSGIR 497

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           E G+ P+  TYN +++ YCK   +  A++ ++EM  H++ PN +T  +L+ GL K GE  
Sbjct: 498 ELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETE 557

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A +    M  +G+ PN+ ++  L++   K       + +   +    +  +   YN LI
Sbjct: 558 RAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLI 617

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LCG+G  + A  +L  M KEGI A+ VTYN+LI G+ K   +EKAL+  +QM  +GV 
Sbjct: 618 TVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVS 677

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P + T++ L+ G   AG +  A  + ++M    L PD  ++  LI G  K GN KE ++ 
Sbjct: 678 PGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKF 737

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           Y EM+   + P   T + LI    K G++  A     E   +       PN   Y  +I 
Sbjct: 738 YCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRR----VPPNSSTYDILIC 793

Query: 482 ALCYDGQI------------LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             C   +              +A  LF++M      P   T   +     R   ++D   
Sbjct: 794 GWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKH 853

Query: 530 LLADMIK 536
           +L DM K
Sbjct: 854 MLKDMYK 860



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 15/355 (4%)

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
           H++ P +  +  L+      G +    + +  M   GV PN+F +N L+   CK G+L  
Sbjct: 5   HHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSL 64

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+ L   +   +I  D  TYN  I G C  G      G L  M K+    +  T N L+ 
Sbjct: 65  ALDL---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVK 121

Query: 338 GYCKEGDMEKALSVCSQMTE--------KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           G+C+ G ++    V   + +          +EPN+VT+++LI   CK   +  A+ LY E
Sbjct: 122 GFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEE 181

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+    +PDVV ++++I+GL K G + E   L +EM +  + P+    + L+  LFK G 
Sbjct: 182 MISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG- 240

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
             +A   F+ ++     G  S + V+   +I  L   G+  +A  +F  +   N  P+N 
Sbjct: 241 --SAWESFIYQSQMIVCG-VSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNI 297

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           TYT M+ G  +   M     LL DM K  +VP+ V    ++ GY + G L  A R
Sbjct: 298 TYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVR 352


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 233/474 (49%), Gaps = 8/474 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+ GL K+G+        EEM L G+V  V TY  +ID  C  G +  AL +   M   G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P    Y ILI+GLC E K  EAE +       G  P + T+  +++GYCK   ++ AL
Sbjct: 261 CNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                ML  N + ++  +GVL++ L K    + A      M   G+ PN+ +Y  +IDG+
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A+ +   ME     P+ +TY+ LI GL    +L  A  L+ KM ++GI   V
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 439

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           +TY +LI G CK+ + + A  +   M + G+ P+   ++ L    CK+G  + A   Y+ 
Sbjct: 440 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSF 496

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +V K +V   V +T+L+DG SK GN      L ++M+        +T S L+  L K  +
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKK 556

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           ++ AL+   + T    G  C  N V Y  II  +  +G+   A  +F++M S   +P   
Sbjct: 557 LNEALSILDQMT--LSGVKC--NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAT 612

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TYT  +    +  ++ +   L+ +M + G+ PD V   V + G    G +  AF
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 248/543 (45%), Gaps = 30/543 (5%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPA-----IQACNALLNGL 94
           LN   +  F P+V  F+ +I  + +   I++AL V  K  +L +     +QA   L+N L
Sbjct: 287 LNDAIVRGFTPTVITFTNIINGYCKAERIDDALRV--KTSMLSSNCKLDLQAYGVLINVL 344

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           IKK +F    E   EM   GL  +VV Y  +ID  C  G V  AL +F  M  +G  P  
Sbjct: 345 IKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNA 404

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y+ LI+GL  + K+ +A ++   M+E G+ P + TY  L+ G CK  + + A   +  
Sbjct: 405 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 464

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  + L P+   + VL   LCK G    A +F V   + GV      Y  L+DG  KAGN
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGN 521

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A  L  +M       D +TY++L++ LC   +L  A  +L +M   G+  N+V Y  
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I    KEG  + A S+ ++M   G +P+  T++  I   CK G I+ A  L  EM    
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI---- 450
           + PDVV +   I+G    G M       K M++A   P+ +T   L+    K   +    
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHY 701

Query: 451 ---SNALNF--------FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
              S   N+         LE+  K      +P  V Y++II   C   ++ +A  LF  M
Sbjct: 702 VDTSGMWNWIELDTVWQLLERMVKHG---LNPTAVTYSSIIAGFCKATRLEEACVLFDHM 758

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           R  ++ P+   YT +++     K     +  + DMI+ G  P       ++ G  + GD 
Sbjct: 759 RGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDY 818

Query: 560 KSA 562
             A
Sbjct: 819 DKA 821



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 238/513 (46%), Gaps = 30/513 (5%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
            N   ++ LI    + G I  A  V  ++    V+P++   NA+++G  K G+       
Sbjct: 193 LNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 252

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M   G   D  TY +LI   CG+    +A  L ++ I +G  PTV+ +T +I+G C 
Sbjct: 253 KALMERNGCNPDDWTYNILIYGLCGEKPD-EAEELLNDAIVRGFTPTVITFTNIINGYCK 311

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ +A  +  SM       +L  Y  L++   K      A E   EM  + L PNVV 
Sbjct: 312 AERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVI 371

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++DG CKVG++ AA   F  M   G  PN + Y+ LI G  +   L +AM+L ++M+
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +  I+P V TY  LI+G C   + + A  L + M + G+  +   YN L    CK G  E
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE 491

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A S    +  KGV    VT++SL+DG  KAGN D A  L  +MV +    D   ++ L+
Sbjct: 492 EAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLL 548

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             L K   + E L +  +M  + +  ++   + +I  + K G+  +A + F E       
Sbjct: 549 QALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH- 607

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG------LLR 520
               P+   Y   I + C  GQI +A  L  +M  D + PD  TY   + G      + R
Sbjct: 608 ---KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664

Query: 521 A----KRMLDV---------MMLLADMIKMGIV 540
           A    KRM+D           +LL   +KM +V
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLV 697



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 246/531 (46%), Gaps = 28/531 (5%)

Query: 28  SRKP--HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ 85
           +R+P   H   S   AL  L   +  P+ +  L+++        E +      E + AIQ
Sbjct: 79  ARRPGFRHTAAS-HAALLQLLARRRAPANYDKLVVSMVSCSDTAEDM-----REAVDAIQ 132

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
           A   +   L K     + W     M L G   +  +Y +LI   C    V +AL L   M
Sbjct: 133 AIRRVGGDLRK-----ACW-LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMM 186

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  G    +  YT+LI GLC E ++  A  +   M   GVVP+++TYNA++DGYCK   +
Sbjct: 187 VQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRM 246

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF-GVFPNIFVYNC 264
             AL     M  +   P+  T+ +L+ GLC  GE        ++ A   G  P +  +  
Sbjct: 247 KDALGIKALMERNGCNPDDWTYNILIYGLC--GEKPDEAEELLNDAIVRGFTPTVITFTN 304

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+G+CKA  + +A+ + + M       D+  Y +LI  L    + + A+  + +M+  G
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  NVV Y S+IDGYCK G +  AL V   M  +G  PN  T+SSLI G  +   +  AM
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAM 424

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L T+M    + P V+ +T LI G  K        RL++ M +  +TP     + L H L
Sbjct: 425 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+GR   A +F + K             V Y +++      G    A+ L   M ++  
Sbjct: 485 CKSGRAEEAYSFLVRKG-------VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGC 537

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADM----IKMGIVPDAVINQVMVR 551
           + D+ TY+ +L+ L + K++ + + +L  M    +K  IV   +I   M++
Sbjct: 538 KADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIK 588



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 188/375 (50%), Gaps = 8/375 (2%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G   N Y+Y  L+ G C+   V  AL     M+      N+ T+ +L+ GLCK G +  A
Sbjct: 155 GCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGA 214

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M   GV P+++ YN +IDG+CK+G + +A+ + + ME+   +PD +TYNILI G
Sbjct: 215 RRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYG 274

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LCG    E AE LL      G    V+T+ ++I+GYCK   ++ AL V + M     + +
Sbjct: 275 LCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLD 333

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           +  +  LI+   K      A    +EM    L P+VV++T++IDG  K G +   L +++
Sbjct: 334 LQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M      P+ +T SSLI+GL ++ ++  A+    +  +  DG   +P  + Y  +IQ  
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE--DG--ITPGVITYTTLIQGQ 449

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C   +   A +LF  M  + L PD   Y  +   L ++ R  +    L   ++ G+V   
Sbjct: 450 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTK 506

Query: 544 VINQVMVRGYQENGD 558
           V    +V G+ + G+
Sbjct: 507 VTYTSLVDGFSKAGN 521



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 228/504 (45%), Gaps = 27/504 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++++I  + ++G +  AL V+R +E     P     ++L+ GLI+  K        
Sbjct: 368 NVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALI 427

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G+   V+TY  LI   C + +   A  LF+ M   G+ P    Y +L H LC  
Sbjct: 428 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA S    +R+ GVV    TY +L+DG+ K  + + A     +M++   + +  T+
Sbjct: 488 GRAEEAYSFL--VRK-GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTY 544

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK  +L  A +    M   GV  NI  Y  +I    K G    A S+ +EM  
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P   TY + I   C +GQ+E AE L+ +M ++G+  +VVTYN  I+G    G M++
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664

Query: 348 ALSVCSQMTEKGVEPNVVTFS---------SLID-------GQCKAGNIDAAMGLYTEMV 391
           A S   +M +   EPN  T+          SL+D       G      +D    L   MV
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMV 724

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P  V ++++I G  K   ++E   L+  M    I+P+    + LI          
Sbjct: 725 KHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFG 784

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS-DNLRPDNCT 510
            A++F    TD  + G+  P+   Y  +I  LC +G   KA  LF D+   ++   +   
Sbjct: 785 KAVSFV---TDMIEFGF-QPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVA 840

Query: 511 YTTMLRGLLRAKRMLDVMMLLADM 534
           +  +  GLL+A  +     LL+ M
Sbjct: 841 WKILNDGLLKAGHVDFCSQLLSAM 864



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 5/341 (1%)

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+LR A    + M   G   N + Y  LI G C+   + EA+ L   M +   S ++ TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            +LIKGLC  G++ GA  +L++M   G++ +V TYN++IDGYCK G M+ AL + + M  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+  T++ LI G C     D A  L  + +++   P V+ FT +I+G  K   + +
Sbjct: 259 NGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            LR+   ML +     +     LI+ L K  R   A     E   +      +PN V+Y 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEA----KETVSEMFANGLAPNVVIYT 373

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           +II   C  G++  A ++F  M  +  RP+  TY++++ GL++ +++   M L+  M + 
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           GI P  +    +++G  +  +  +AFR  E ++++ +   E
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 474



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 20/344 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K +   +S L+ A  +   + EAL +  ++    V   I A   +++ +IK+GK D    
Sbjct: 538 KADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKS 597

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + EM+  G      TY V I   C  G + +A +L  EM   G+ P VV Y + I+G  
Sbjct: 598 MFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCG 657

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA----------------DVNRAL 209
           +   M  A S  + M +    PN +TY  L+  + K++                +++   
Sbjct: 658 HMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVW 717

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +    M+ H L P  VT+  ++ G CK   L  A   F HM    + PN  +Y  LI   
Sbjct: 718 QLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCC 777

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILAN 328
           C      +A+S  ++M +F   P + +Y+ LI GLC  G  + A+ L   +   E    N
Sbjct: 778 CDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHN 837

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            V +  L DG  K G ++    + S M  +  + +  T+S + D
Sbjct: 838 EVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTD 881



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 22/300 (7%)

Query: 21  VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE- 79
           +   ++K  K  H   S+FN + S    K + + ++  I ++ ++G IEEA  +  ++E 
Sbjct: 582 IISEMIKEGKHDHA-KSMFNEMIS-SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639

Query: 80  --VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDC--------- 128
             V P +   N  +NG    G  D  +   + M+      +  TY +L+           
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDA 699

Query: 129 ----CCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
                 G  + ++      L + M+  G+ PT V Y+ +I G C   ++ EA  +F  MR
Sbjct: 700 HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMR 759

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
              + PN   Y  L+   C +    +A+ F  +M+    QP++ ++  L+ GLC  G+  
Sbjct: 760 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYD 819

Query: 242 AAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
            A + F  +     +  N   +  L DG  KAG++     L S ME      D  TY+++
Sbjct: 820 KAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 224/426 (52%), Gaps = 4/426 (0%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           + LP+I     LL       ++++V  F ++M L G+  D+ ++ +LI C C    +  A
Sbjct: 66  QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L++  +M+  G EP++V +  L+HG C  N++ +A S+   M + G  PN+  YN L+DG
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK  ++N ALE  +EM    L  +VVT+  L+ GLC  G    A      M K  + P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +  LID   K GNL EA  L  EM +  + P+  TYN +I GLC  G+L  A+    
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M  +G   NVVTYN+LI G+CK   +++ + +  +M+ +G   ++ T+++LI G C+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ ++  MV + + PD++    L+ GL  +G ++  L  + +M E++    +   +
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +IHGL K  ++  A   F       +G    P+   Y  +I  LC +G   +A +L   
Sbjct: 426 IMIHGLCKADKVEKAWELFCRL--PVEG--VKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 499 MRSDNL 504
           M+ + +
Sbjct: 482 MKEEGI 487



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 224/437 (51%), Gaps = 4/437 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF EM+     P++V +T L+    N  +        + M   G+  +LY++  L+ 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VTFG L+ G C V  +  A +  + M K G  P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ VYN LIDG CK G L  A+ L +EMEK  +  DV TYN L+ GLC  G+   A  +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M K  I  +VVT+ +LID + K+G++++A  +  +M +  V+PN VT++S+I+G C  
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A   +  M  K   P+VV +  LI G  K   + E ++L++ M        +FT 
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LIHG  + G++  AL+ F     +      +P+ + +  ++  LC +G+I  A   F 
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRR----VTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           DMR          Y  M+ GL +A ++     L   +   G+ PDA    +M+ G  +NG
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470

Query: 558 DLKSAFRCSEFLKESRI 574
             + A      +KE  I
Sbjct: 471 PRREADELIRRMKEEGI 487



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 223/453 (49%), Gaps = 8/453 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L  G +   +F+  +  + EMV    +  +V +  L+            +    +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I   +  +TILIH  C  +++  A S+   M + G  P++ T+ +L+ G+C V  +  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+    +PNVV +  L+DGLCK GEL  A      M K G+  ++  YN L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C +G   +A  +  +M K  I+PDV T+  LI      G L+ A+ L ++M +  +  N 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYNS+I+G C  G +  A      M  KG  PNVVT+++LI G CK   +D  M L+  
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  +    D+  +  LI G  + G ++  L ++  M+  ++TP + T   L+HGL  NG 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 450 ISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           I +AL  F  + +++K  G       V Y  +I  LC   ++ KA +LF  +  + ++PD
Sbjct: 402 IESALVKFDDMRESEKYIG------IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             TYT M+ GL +     +   L+  M + GI+
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 190/379 (50%), Gaps = 3/379 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ LI  F     +  AL V  K+  L   P+I    +LL+G     +    +     MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +VV Y  LID  C  G++  AL L +EM  KG+   VV Y  L+ GLC   +  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A  M R M +  + P++ T+ AL+D + K  +++ A E Y EM+  ++ PN VT+  ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLC  G L  A   F  MA  G FPN+  YN LI G CK   + E M L   M     +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D+FTYN LI G C VG+L  A  +   M    +  +++T+  L+ G C  G++E AL  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M E      +V ++ +I G CKA  ++ A  L+  + ++ + PD   +T +I GL K
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 412 DGNMKETLRLYKEMLEAKI 430
           +G  +E   L + M E  I
Sbjct: 469 NGPRREADELIRRMKEEGI 487



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 4/378 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L  G+        A   + EM+H    P++V F  L+     +        F   M  +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           +  +++ +  LI   C+   L  A+S+  +M K    P + T+  L+ G C V ++  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L+  M K G   NVV YN+LIDG CK G++  AL + ++M +KG+  +VVT+++L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C +G    A  +  +M+ +S+ PDVV FTALID   K GN+ E   LYKEM+++ + P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +S+I+GL  +GR+ +A   F    D      C PN V Y  +I   C    + +  K
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTF----DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF  M  +    D  TY T++ G  +  ++   + +   M+   + PD + + +++ G  
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397

Query: 555 ENGDLKSAFRCSEFLKES 572
            NG+++SA    + ++ES
Sbjct: 398 VNGEIESALVKFDDMRES 415



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 5/290 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIK 96
           LN +E       V  ++TL+      G   +A  + R   K  + P +    AL++  +K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G  D   E Y+EM+   +  + VTY  +I+  C  G +  A   FD M  KG  P VV 
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  LI G C    + E   +F+ M   G   +++TYN L+ GYC+V  +  AL+ +  M+
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+++T  +L+ GLC  GE+ +A   F  M +   +  I  YN +I G CKA  + 
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +A  L   +    + PD  TY I+I GLC  G    A+ L+++M +EGI+
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++   L+ EM+ ++  PS+   + L+     N R    + +F +K +         +H L
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKME-----LYGISHDL 106

Query: 476 YA--AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           Y+   +I   C   ++  A  +   M      P   T+ ++L G     R+ D   L+  
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
           M+K G  P+ V+   ++ G  +NG+L  A      +++  +G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 252/511 (49%), Gaps = 18/511 (3%)

Query: 47  IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           +PK  P+ F   +  F  M H+             P+I + N LL+ ++K   + +V   
Sbjct: 30  LPK-TPT-FDDAVSTFHRMLHLHPP----------PSIVSLNKLLSSIMKTKHYPTVVSL 77

Query: 107 YEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
              +   G     +VT  + I+     G +  A ++  +++ +G        T L+ GLC
Sbjct: 78  CSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLC 137

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +  EA +++      G   +   Y  L++G CK+     A+E   +M    ++PN++
Sbjct: 138 LKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLI 197

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            + +++DGLCK G +  A      M   G+  ++F YN LI G C AG    A+ L +EM
Sbjct: 198 MYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM 257

Query: 286 -EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
             K ++ PDV+T+NIL+  LC +G +  A  +   M K G+  +VV+ N+L++G+C  G 
Sbjct: 258 VMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGC 317

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           M +A  V  +M E+G  PNV+++S+LI+G CK   +D A+ L TEM  ++LVPD V +  
Sbjct: 318 MSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNC 377

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+DGLSK G +     L + M  +   P + T + L+    K   +  AL  F    D  
Sbjct: 378 LLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                SPN   Y  +I  LC  G++  A ++F  +     RP+  TY  M+ GL R   +
Sbjct: 438 ----ISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLL 493

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            +   LL +M+  G  P+AV    +VR   E
Sbjct: 494 DEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 231/460 (50%), Gaps = 12/460 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI-----EVLPAI 84
           K +    S+ + L+S   PK +    S  I + + +G +  A  V  KI      V P  
Sbjct: 69  KHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPF- 127

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
                L+ GL  KG+       Y+  V  G   D V YG LI+  C  G    A+ L  +
Sbjct: 128 -TLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRK 186

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M   G+ P +++Y +++ GLC E  + EA  +   M   G+  +++TYN+L+ G+C    
Sbjct: 187 MEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246

Query: 205 VNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
              A+   +EM +  +++P+V TF +L+D LCK+G +  A N F  M K G+ P++   N
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCN 306

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L++G C  G + EA  +   M +    P+V +Y+ LI G C V  ++ A  LL +M++ 
Sbjct: 307 ALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            ++ + VTYN L+DG  K G +     +   M   G  P+++T++ L+D   K   +D A
Sbjct: 367 NLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKA 426

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L+  +V   + P++  +  LIDGL K G MK    +++ +      P++ T + +I+G
Sbjct: 427 LALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMING 486

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           L + G +  A    LE  D  DG    PN V +  +++AL
Sbjct: 487 LRREGLLDEAEALLLEMVD--DG--FPPNAVTFDPLVRAL 522



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 229/466 (49%), Gaps = 6/466 (1%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EP 152
           L K   FD     +  M+       +V+   L+            ++L   +  KG  +P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           ++V  +I I+ L +  +M  A S+   + + G   + +T   LM G C       AL  Y
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
              +      + V +G L++GLCK+G+ R A      M K GV PN+ +YN ++DG CK 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVVT 331
           G + EA  LCSEM    I  DVFTYN LI G CG GQ +GA  LL +M  KE +  +V T
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYT 269

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N L+D  CK G + +A +V   M ++G+EP+VV+ ++L++G C  G +  A  ++  MV
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
            +  +P+V+ ++ LI+G  K   + E LRL  EM +  + P   T + L+ GL K+GR+ 
Sbjct: 330 ERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV- 388

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
               + L +  +  G   +P+ + Y  ++        + KA  LF  +    + P+  TY
Sbjct: 389 -LYEWDLVEAMRASGQ--APDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTY 445

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             ++ GL +  RM     +   +   G  P+     +M+ G +  G
Sbjct: 446 NILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 6/394 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF-YHEMLHHNLQPNVVTFGVL 230
           +A S F  M      P++ + N L+    K       +    H       +P++VT  + 
Sbjct: 38  DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIF 97

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ L  +G++  A +    + K G   + F    L+ G C  G  FEA++L         
Sbjct: 98  INSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGF 157

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S D   Y  LI GLC +G+   A  LL+KM K G+  N++ YN ++DG CKEG + +A  
Sbjct: 158 SFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACG 217

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGL 409
           +CS+M  KG+  +V T++SLI G C AG    A+ L  EMV+K  V PDV  F  L+D L
Sbjct: 218 LCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDAL 277

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K G + E   ++  M++  + P V + ++L++G    G +S A   F    ++      
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGK---- 333

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN + Y+ +I   C    + +A +L ++M   NL PD  TY  +L GL ++ R+L    
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L+  M   G  PD +   V++  Y +   L  A 
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKAL 427



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 199/427 (46%), Gaps = 6/427 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALM 196
           A++ F  M+     P++V    L+  +          S+   +   G   P+L T +  +
Sbjct: 39  AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +    +  +  A     +++      +  T   LM GLC  G    A N + H    G  
Sbjct: 99  NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            +   Y  LI+G CK G   +A+ L  +MEK  + P++  YN+++ GLC  G +  A GL
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGL 218

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK-GVEPNVVTFSSLIDGQC 375
             +M  +GI  +V TYNSLI G+C  G  + A+ + ++M  K  V P+V TF+ L+D  C
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALC 278

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G +  A  ++  M+ + L PDVV   AL++G    G M E   ++  M+E    P+V 
Sbjct: 279 KLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVI 338

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           + S+LI+G  K   +  AL    E   +       P+ V Y  ++  L   G++L    L
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRN----LVPDTVTYNCLLDGLSKSGRVLYEWDL 394

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
              MR+    PD  TY  +L   L+ + +   + L   ++  GI P+     +++ G  +
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454

Query: 556 NGDLKSA 562
            G +K+A
Sbjct: 455 GGRMKAA 461


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/409 (32%), Positives = 213/409 (52%), Gaps = 8/409 (1%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDS 102
           P+  PS  S   L+        ++ A   +R   +  V P I   N +++GL + G+   
Sbjct: 150 PRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRK 209

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCC---GQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
             +  +++   GL   V TY  LID  C   G G++     L  EM++ GI PT V + +
Sbjct: 210 AGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           LI+G C  +    A  +F  M++ G+  ++ TYN+L+ G C    V   ++   EM    
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           L PN +TFG ++ G CK G +  A ++   M +  V P++ +YN LID + + G + +AM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           ++   M K  ISP+V TYN LI G    G    A GLL +M ++GI A+VVTYN LI   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C +G++ KA+ +  +M+E G+EPN +T++++I G C  GNI +A  + T M       +V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           V +   I    + G M E   L  EML+  + P+  T  ++  G+ + G
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 184/335 (54%), Gaps = 7/335 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P+  + NAL+ G      V+ A + +   L   + P++ TF  ++ GLC++G+LR AG+ 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              +  +G+ P++  YN LIDG+CK   AGN++    L  EM +  ISP   T+ +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C       A  + ++M ++GI A+VVTYNSLI G C EG +E+ + +  +M + G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            +TF  ++ G CK G +  A      M  +++ PDVV++  LID   + G M++ + + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M +  I+P+V T + LI G  ++G   +A     E  +K        + V Y  +I AL
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG----IEADVVTYNVLIGAL 449

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           C  G++ KA KL  +M    L P++ TY T+++G 
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 196/409 (47%), Gaps = 7/409 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+  + NALL GL+   + D   + +   +   +  D+ T+  +I   C  G + KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNEN---KMVEAESMFRSMRECGVVPNLYTYNALMDG 198
             ++   G+ P+V  Y  LI G C +     M   + + + M E G+ P   T+  L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           YCK ++   A+  + EM    +  +VVT+  L+ GLC  G++         M   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              + C++ G CK G + +A      M +  + PDV  YNILI     +G++E A  + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M K+GI  NV TYN LI G+ + GD   A  +  +M EKG+E +VVT++ LI   C  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ L  EM    L P+ + +  +I G    GN+K    +   M + +   +V T +
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             I    + G++  A +   E  DK       PN + Y  I + +   G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKC----LVPNGITYETIKEGMMEKG 558



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 12/380 (3%)

Query: 202 VADVNRALEFYHEML-----HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           +A  ++ L  Y   L     H   +P+  +   L+ GL     +  A   F    +  V 
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGA 313
           P+I+ +N +I G C+ G L +A  +  +++ + ++P V TYN LI G C   G G +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
           + LL++M + GI    VT+  LI+GYCK  +   A+ V  +M ++G+  +VVT++SLI G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C  G ++  + L  EM    L P+ + F  ++ G  K G M +       M E  + P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V   + LI    + G++ +A+        K      SPN   Y  +I      G    AS
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKG----ISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M+   +  D  TY  ++  L     +   + LL +M ++G+ P+ +    +++G+
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 554 QENGDLKSAFRCSEFLKESR 573
            + G++KSA+     +++ R
Sbjct: 485 CDKGNIKSAYEIRTRMEKCR 504



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 7/286 (2%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P   + N L+ GL G  +++ AE   +   +  +  ++ T+N++I G C+ G + KA  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCK---AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
              +   G+ P+V T++SLIDG CK   AGN+     L  EMV   + P  V F  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K+ N    +R+++EM +  I  SV T +SLI GL   G++   +    E  D      
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG---- 329

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            SPN + +  +++  C  G +  A+     M   N+ PD   Y  ++    R  +M D M
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            +   M K GI P+      ++ G+  +GD +SA    + +KE  I
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 7/252 (2%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           + N+L+ G      ++ A         + V P++ TF+++I G C+ G +  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 391 VIKSLVPDVVVFTALIDGLSKDG---NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
               L P V  + +LIDG  K G   NM     L KEM+EA I+P+  T   LI+G  KN
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
              + A+  F E   +      + + V Y ++I  LC +G++ +  KL  +M    L P+
Sbjct: 278 SNTAAAVRVFEEMKQQG----IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             T+  +L+G  +   M D    +  M +  + PD VI  +++  Y+  G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 568 FLKESRIGSSET 579
            + +  I  + T
Sbjct: 394 AMAKKGISPNVT 405


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 221/442 (50%), Gaps = 8/442 (1%)

Query: 69  EEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           E+AL+ + ++    ++P     N LL  LIK   F+  W  + E     +  DV ++G++
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIM 170

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I  CC  G + K   +  +M + G+ P VV+YT LI G C    +   + +F  M E  V
Sbjct: 171 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 230

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           V N YTY  L++G+ K+      +E Y +M    + PNV T+  ++   C  G+L  A  
Sbjct: 231 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 290

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M + GV  N+  YN LI G C+   + EA  L   M++  +SP++ +YN LI G C
Sbjct: 291 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 350

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G L+ A  L  +M   G   ++ TYN LI G+ +  +      +  +M  +G+ P+ V
Sbjct: 351 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ L+D   ++ NI+ A  +Y+ M    LV D+ ++  LI GL   G+MKE  +L+K +
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            E  + P+    +++I+G  K G    AL    E  +        PN   Y + IQ LC 
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG----MVPNVASYNSTIQILCK 526

Query: 486 DGQILKASKLFSDMRSDNLRPD 507
           D +  +A  L  DM    L+P 
Sbjct: 527 DEKWTEAEVLLKDMIELGLKPS 548



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 196/372 (52%), Gaps = 5/372 (1%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNG 93
           F  L  +E    +P+V  ++TLI    + G IE    ++ K   ++V+        L+NG
Sbjct: 184 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 243

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             K G      E YE+M L G+V +V TY  +I  CC  G +  A  LFDEM ++G+   
Sbjct: 244 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 303

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV Y  LI GLC E +++EAE +   M+  G+ PNL +YN L+DGYC + ++++A   ++
Sbjct: 304 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFN 363

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M      P++ T+ +L+ G  +        +    M   G+ P+   Y  L+D   ++ 
Sbjct: 364 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 423

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           N+ +A  + S MEK  +  D++ Y +LI GLC VG ++ A  L + + +  +  N V YN
Sbjct: 424 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 483

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I GYCKEG   +AL +  +M E G+ PNV +++S I   CK      A  L  +M+  
Sbjct: 484 TMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIEL 543

Query: 394 SLVPDVVVFTAL 405
            L P + ++  +
Sbjct: 544 GLKPSISIWNMI 555



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 215/430 (50%), Gaps = 4/430 (0%)

Query: 26  LKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--VLPA 83
           ++S+ P    +     +    +P  N   F+ L+I   +    E+A  V+ + +  V   
Sbjct: 106 VRSQLPEQALFYFNQMIGRGLVPGSN--TFNNLLILLIKSNFFEKAWRVFNETKGNVKLD 163

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + +   ++ G  + G  D  +E   +M   GL  +VV Y  LID CC  GD+ +   LF 
Sbjct: 164 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 223

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M +  +      YT+LI+G        +   ++  M+  G+VPN+YTYN+++   C   
Sbjct: 224 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 283

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            +N A E + EM    +  NVVT+  L+ GLC+   +  A      M + G+ PN+  YN
Sbjct: 284 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LIDG+C  GNL +A SL ++M+    SP + TYNILI G        G   ++++M   
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 403

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  + VTY  L+D   +  ++EKA  + S M + G+  ++  +  LI G C  G++  A
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L+  +    L P+ V++  +I G  K+G+    LRL KEM E  + P+V + +S I  
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQI 523

Query: 444 LFKNGRISNA 453
           L K+ + + A
Sbjct: 524 LCKDEKWTEA 533



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 196/402 (48%), Gaps = 3/402 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K +   F  +I    E+G++++   V  ++E +   P +     L++G  K G  +   +
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M    +VA+  TY VLI+     G     + L+++M   GI P V  Y  +I   C
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N+ K+  A  +F  MRE GV  N+ TYN L+ G C+   V  A      M    L PN++
Sbjct: 281 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 340

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+DG C +G L  A + F  M   G  P++  YN LI G  +A N      +  EM
Sbjct: 341 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 400

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E   +SP   TY IL+  L     +E A  +   M K G++A++  Y  LI G C  GDM
Sbjct: 401 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 460

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +   + E  ++PN V ++++I G CK G+   A+ L  EM    +VP+V  + + 
Sbjct: 461 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNST 520

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           I  L KD    E   L K+M+E  + PS+   + +    F N
Sbjct: 521 IQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 212/458 (46%), Gaps = 27/458 (5%)

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--------- 186
           +KAL+LF     +G + T    + ++H L + N    ++S+   +    +          
Sbjct: 20  LKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSL 79

Query: 187 ------PNLYTY-------NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 P+L ++        A+++ + +     +AL ++++M+   L P   TF  L+  
Sbjct: 80  FHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLIL 139

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L K      A   F +  K  V  +++ +  +I G C+ G L +   +  +ME+  +SP+
Sbjct: 140 LIKSNFFEKAWRVF-NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPN 198

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V  Y  LI G C  G +E  + L  KM +  ++AN  TY  LI+G+ K G  +  + +  
Sbjct: 199 VVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYE 258

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M   G+ PNV T++S+I   C  G ++ A  L+ EM  + +  +VV +  LI GL ++ 
Sbjct: 259 KMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 318

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + E  RL   M    ++P++ + ++LI G    G +  A + F +   K+ G   SP+ 
Sbjct: 319 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM--KSSGQ--SPSL 374

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I            + +  +M +  L P   TYT ++  L+R+  +     + + 
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M K G+V D  I  V++ G    GD+K A +  + L E
Sbjct: 435 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 134/262 (51%), Gaps = 5/262 (1%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A     +M   G++    T+N+L+    K    EKA  V ++ T+  V+ +V +F  +
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIM 170

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G C+ G +D    +  +M    L P+VVV+T LIDG  K+G+++   +L+ +M E  +
Sbjct: 171 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 230

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
             + +T + LI+G FK G   + +  + EK   T      PN   Y ++I   C DG++ 
Sbjct: 231 VANQYTYTVLINGFFKMGLKKDGIELY-EKMKLTG---IVPNVYTYNSMICRCCNDGKLN 286

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            A +LF +MR   +  +  TY T++ GL + +R+L+   L+  M + G+ P+ +    ++
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 346

Query: 551 RGYQENGDLKSAFRCSEFLKES 572
            GY   G+L  A      +K S
Sbjct: 347 DGYCSIGNLDKASSLFNQMKSS 368


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 251/524 (47%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++      G I +AL V  ++      P     + +L    + G F +     
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   G   D     ++++  C QG V +A+ L  ++   G E  +V Y  ++ GLC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  + E +   M      PN+ T+N L+   C+     R  E   +M  H   P++  +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN ++ G C A    EA  L SEM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M   G + +V+TY ++I+G+CKEG +++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   M+  G +PN V+++ ++ G C AG    A  L ++M+ +   P+ V F  LI+
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG--- 526

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G++ K  ++F +++   +R D   Y  ++  L +       
Sbjct: 527 -ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +   A M+  G +P+     ++++G    G  K A    E L E
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA---QELLSE 626



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  E G ++EA+ + RK+        I + NA+L GL    ++  V E  +EMV      
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M + G  P + +Y  +I G+C E  +  A  + 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN ++ G C       A E   EM   +   + VTF +L+D  C+ 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M   G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC  G+   AE L+ +M ++G   N VT+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  + A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K      A++FF           C PN   Y 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG----CMPNESTYT 605

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G   +A +L S++ S
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCS 629



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 4/447 (0%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C +G +  AL + DEM  KG  P   +Y +++   C       +  +  +M   G   + 
Sbjct: 122 CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDT 181

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
              N +++  C+   V+ A+    ++     + ++V++  ++ GLC              
Sbjct: 182 GNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M +    PNI  +N LI   C+ G       + ++M +   +PD+  Y  +I G+C  G 
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE A  +L +M   G+  NVV YN+++ G C     ++A  + S+M +K    + VTF+ 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+D  C+ G +D  + L  +M+    +PDV+ +T +I+G  K+G + E + L K M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  + + ++ GL   GR  +A     +   +     C PN V +  +I  LC  G +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG----CPPNPVTFNTLINFLCKKGLV 477

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +L   M  +   PD  +Y+T++ GL +A +  + + LL  M+  GI P+ +I   +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGS 576
                  G +    +  + +K++ I S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRS 564



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  V YTI++ GLC+  + V+AE +   M + G  PN  T+N L++  CK   V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC   + + A      M   G + 
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG  ++A  + S++  +G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 251/524 (47%), Gaps = 10/524 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  ++      G I +AL V  ++      P     + +L    + G F +     
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E M   G   D     ++++  C QG V +A+ L  ++   G E  +V Y  ++ GLC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  + E +   M      PN+ T+N L+   C+     R  E   +M  H   P++  +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++DG+CK G L  A      M  +G+ PN+  YN ++ G C A    EA  L SEM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +   D  T+NIL+   C  G ++    LL++M   G + +V+TY ++I+G+CKEG +++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +   M+  G +PN V+++ ++ G C AG    A  L ++M+ +   P+ V F  LI+
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K    
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG--- 526

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN ++Y++I  AL  +G++ K  ++F +++   +R D   Y  ++  L +       
Sbjct: 527 -ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +   A M+  G +P+     ++++G    G  K A    E L E
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA---QELLSE 626



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 7/444 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A  E G ++EA+ + RK+        I + NA+L GL    ++  V E  +EMV      
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           ++VT+  LI   C  G   +   +  +M + G  P + +Y  +I G+C E  +  A  + 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M   G+ PN+  YN ++ G C       A E   EM   +   + VTF +L+D  C+ 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G +         M   G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
            I++KGLC  G+   AE L+ +M ++G   N VT+N+LI+  CK+G +E+A+ +  QM  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+++++S++IDG  KAG  + A+ L   MV K + P+ ++++++   LS++G + +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            ++++  + +  I       +++I  L K      A++FF           C PN   Y 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG----CMPNESTYT 605

Query: 478 AIIQALCYDGQILKASKLFSDMRS 501
            +I+ L  +G   +A +L S++ S
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCS 629



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 4/447 (0%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C +G +  AL + DEM  KG  P   +Y +++   C       +  +  +M   G   + 
Sbjct: 122 CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDT 181

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
              N +++  C+   V+ A+    ++     + ++V++  ++ GLC              
Sbjct: 182 GNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M +    PNI  +N LI   C+ G       + ++M +   +PD+  Y  +I G+C  G 
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE A  +L +M   G+  NVV YN+++ G C     ++A  + S+M +K    + VTF+ 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           L+D  C+ G +D  + L  +M+    +PDV+ +T +I+G  K+G + E + L K M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+  + + ++ GL   GR  +A     +   +     C PN V +  +I  LC  G +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG----CPPNPVTFNTLINFLCKKGLV 477

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A +L   M  +   PD  +Y+T++ GL +A +  + + LL  M+  GI P+ +I   +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGS 576
                  G +    +  + +K++ I S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRS 564



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G +P  V YTI++ GLC+  + V+AE +   M + G  PN  T+N L++  CK   V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              + G + + + +   ++   I  D   YN +I  LC   + + A      M   G + 
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG  ++A  + S++  +G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 266/553 (48%), Gaps = 31/553 (5%)

Query: 37  SVFNALNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNAL 90
           ++++A+   +     P  + F  LI A +  G   EA+  + ++E      P     NA+
Sbjct: 122 AMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAV 181

Query: 91  LNGLIKKG-KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L  L+  G         Y  MV  G + +  TY VLI   C +G  + AL LFDEMI +G
Sbjct: 182 LRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRG 241

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I P V  +TIL+  +CN  ++ EAE++  SM + G  P+  TYNA + G CK   V+ A+
Sbjct: 242 ITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI 301

Query: 210 EFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKFGVFPNIFVYNCLID 267
           E    + H       +  +  L+DGL   G        ++  + +  V P+I +Y  +I 
Sbjct: 302 ERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIR 361

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  +AG   +A +   EM++   +PD F YN L+K LC  G L+GA  L+ +M +  ++ 
Sbjct: 362 GCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVL 421

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++ TY ++I G CKE  +++A+ V   M E G  P+V+T++ LIDG  +A  ++ A  L+
Sbjct: 422 DIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLF 481

Query: 388 TEMVI-------------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            +M +              + V D      L++ + + G + +  +L + ++++ + P V
Sbjct: 482 YKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDV 541

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++L++GL K   +  AL  F E   K   G+   + + Y  +I +L    +   A  
Sbjct: 542 VTYNTLLNGLCKVRNLDGALRLFRELQVK---GF-PLDEITYGTLIDSLLRAHRYNDALT 597

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG---IVPDAVINQVMVR 551
           LF D+      P    Y +M+R L R +++   + L  D +      +  D VI+    R
Sbjct: 598 LFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISS--AR 655

Query: 552 GYQENGDLKSAFR 564
              E G L  A R
Sbjct: 656 KKFEEGCLHEAVR 668



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 168/401 (41%), Gaps = 58/401 (14%)

Query: 45  LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK 99
           LE    +P +  ++ +I   +E G   +A   + +++     P     N LL  L   G 
Sbjct: 344 LEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGD 403

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D       EMV   +V D+ TY  +I   C +  V +A+ +FD M++ G  P+V+ Y +
Sbjct: 404 LDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNV 463

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLY--------------TYNALMDGYCKVADV 205
           LI GL   +++ EA  +F  M E G  P+L+              T   L++  C+   V
Sbjct: 464 LIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQV 522

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            +A +    ++   + P+VVT+  L++GLCKV  L  A   F  +   G   +   Y  L
Sbjct: 523 LKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTL 582

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL-------- 317
           ID   +A    +A++L  ++     +P +  YN +++ LC + +L  A  L         
Sbjct: 583 IDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKY 642

Query: 318 ------------QKMYKEGIL----------------ANVVTYNSLIDGYCKEGDMEKAL 349
                       +K ++EG L                 N   Y   + G  + G +E AL
Sbjct: 643 NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDAL 702

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG--LYT 388
            +   + E G++        L    C  GN+ AA+   LYT
Sbjct: 703 KIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYT 743



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 8/252 (3%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVEPNVVTFSSLIDGQCKAGN-ID 381
           G+      + +LI  +   G   +A+   S+M  E G  P    +++++     +G  + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ LY  MV    +P+   +  LI GL K G   + L+L+ EM+   ITP+V T + L+
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR- 500
             +   G++  A N      DK     C P+ V Y A +  LC  G++ +A +    +R 
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKG----CPPDEVTYNAFLSGLCKAGRVDEAIERLEALRH 309

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-IVPDAVINQVMVRGYQENGDL 559
           +         Y+ ++ GL  A R  +      ++++   + PD V+  +M+RG  E G  
Sbjct: 310 TGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRT 369

Query: 560 KSAFRCSEFLKE 571
             AF   + +KE
Sbjct: 370 NDAFAFFDEMKE 381



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 5/198 (2%)

Query: 377 AGNIDAAM-GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKITPSV 434
           A + DAAM     +     L P    F ALI   +  G   E +  +  M  E    P+ 
Sbjct: 116 ATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTT 175

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           F  ++++  L  +G    A+   L   ++     C PN   Y  +I  LC  G  + A K
Sbjct: 176 FVYNAVLRVLVASG---GAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALK 232

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LF +M S  + P+  T+T +L  +  A ++ +   LL  M   G  PD V     + G  
Sbjct: 233 LFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLC 292

Query: 555 ENGDLKSAFRCSEFLKES 572
           + G +  A    E L+ +
Sbjct: 293 KAGRVDEAIERLEALRHT 310


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 162/601 (26%), Positives = 267/601 (44%), Gaps = 78/601 (12%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F +L S   P+  PS++  + L+ +      +E   W+Y+ +    V P     N L+
Sbjct: 96  SHFKSLRS-NFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLI 154

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
             L   G  +   E +++M   G   +  T+G+L+   C  G   K L L  +M   GI 
Sbjct: 155 GLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGIL 214

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V+Y  LI   C E K  +AE +   MRE G+VP++ T+N+ +   C    +  A   
Sbjct: 215 PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRI 274

Query: 212 YHEM-------LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           + +M       L H   PNV+T+ +++ G CK G L  A      M +   F N+  YN 
Sbjct: 275 FRDMQIDEELGLPH---PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI 331

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
            + G  + G L EA  +  EM    I PD+++YNI++ GLC  G L  A  L+  M + G
Sbjct: 332 WLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391

Query: 325 ILANVVTYNSLIDGYC-----------------------------------KEGDMEKAL 349
           IL + VTY++L+ GYC                                   KEG + +A 
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM----GLYTE---------------- 389
           ++  +M EKG   + VT + +I+  C  G +D A+    G++T                 
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLV 511

Query: 390 ---MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              +  K   PD+V ++ +I GL K G + +  + + EM+   + P      + IH   +
Sbjct: 512 DDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCR 571

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G+IS+A     +   +     C+     Y ++I  L    QI +   L  +MR   + P
Sbjct: 572 EGKISSAFQVLKDMEKRG----CNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSP 627

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D CTY  ML  L    R+ D   +L +M++ GI P+    +++++ + +  D K++    
Sbjct: 628 DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687

Query: 567 E 567
           E
Sbjct: 688 E 688



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 240/510 (47%), Gaps = 28/510 (5%)

Query: 57  TLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            L+   ++ G   +A+  ++ +     E  P+I   N LL   I++ + + V   Y++MV
Sbjct: 80  NLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           L  +  +  T+ +LI   C  G +  A  LFD+M  +G EP    + IL+ G C      
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +   +   MR  G++PN   YN L+  +CK    + A +   +M    L P+V TF   +
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259

Query: 232 DGLCKVGELRAAGNFFVHMA---KFGV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LC  G++  A   F  M    + G+  PN+  Y  ++ G CK G L EA +L   M++
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
                ++ +YNI + GL   G+L  A  +L++M   GI  ++ +YN ++DG CK G +  
Sbjct: 320 NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +   M   G+ P+ VT+S+L+ G C  G +  A  L  EM+  +  P+      L+ 
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL------------- 454
            L K+G + E   L ++M E        T + +I+ L  NG++  A+             
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAA 499

Query: 455 -----NFFLEKTDKT-DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
                N F+   D T  G  C+P+ V Y+ II  LC  G++  A K F +M S  L+PD+
Sbjct: 500 LGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDS 559

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
             Y T +    R  ++     +L DM K G
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRG 589



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 204/440 (46%), Gaps = 29/440 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK----IEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           N   ++  ++     G + EA W+  K    I + P I + N +++GL K G        
Sbjct: 325 NLESYNIWLLGLIRNGKLLEA-WIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARML 383

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M+  G++ D VTY  L+   C +G V +A NL  EMI     P      +L+H L  
Sbjct: 384 MGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWK 443

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH------NL 220
           E ++ EAE++ + M E G   +  T N +++  C    +++A+E  + M  H      NL
Sbjct: 444 EGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNL 503

Query: 221 -----------------QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
                             P++VT+  ++ GLCK G L  A   F+ M   G+ P+  +Y+
Sbjct: 504 GNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYD 563

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
             I   C+ G +  A  +  +MEK   +  + TYN LI GL    Q+    GL+ +M ++
Sbjct: 564 TFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  +V TYN +++  C+ G +  A SV  +M +KG+ PN+ +F  LI   CKA +  A+
Sbjct: 624 GVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKAS 683

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             ++ E+ +        ++T + + L   G + E   L++  L+       F    LI  
Sbjct: 684 HEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDR 742

Query: 444 LFKNGRISNALNFFLEKTDK 463
           L K+ ++  A +      DK
Sbjct: 743 LCKDEKLEAASDVLHRLIDK 762



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 46/414 (11%)

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           QP++  + VL+    +   +      +  M    V P  + +N LI   C +G+L +A  
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L  +M      P+ FT+ IL++G C  G       LL +M   GIL N V YN+LI  +C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV---- 396
           KEG    A  +  +M E G+ P+V TF+S I   C +G I  A  ++ +M I   +    
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 397 PDVVVFTALIDGLSKDGNMKETLRL----------------------------------- 421
           P+V+ +  ++ G  K+G ++E   L                                   
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            KEML   I P +++ + ++ GL KNG +S+A    L      +G    P+ V Y+ ++ 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR--MLMGLMIRNG--ILPDTVTYSTLLH 404

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G++ +A+ L  +M S+N  P+  T   +L  L +  R+ +   LL  M + G   
Sbjct: 405 GYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGV 464

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTV 595
           D V   +++     NG L  A    E +       S   G+   SF+G +  T+
Sbjct: 465 DTVTCNIIINALCNNGQLDKAI---EIVNGMWTHGSAALGNLGNSFIGLVDDTI 515



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 144/337 (42%), Gaps = 40/337 (11%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-----------------------DVVTY 122
            CN ++N L   G+ D   E    M   G  A                       D+VTY
Sbjct: 468 TCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTY 527

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             +I   C  G +  A   F EM+ KG++P   IY   IH  C E K+  A  + + M +
Sbjct: 528 STIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEK 587

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFY---HEMLHHNLQPNVVTFGVLMDGLCKVGE 239
            G    L TYN+L+ G   +   N+  E Y    EM    + P+V T+  +++ LC+ G 
Sbjct: 588 RGCNKTLQTYNSLILG---LGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGR 644

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV----- 294
           +  A +    M + G+ PNI  +  LI   CKA + F+A       E FEI+ +V     
Sbjct: 645 INDAPSVLDEMLQKGISPNISSFRILIKAFCKACD-FKA-----SHEVFEIALNVCGHKE 698

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             Y ++   L   G++  A+ L +             Y  LID  CK+  +E A  V  +
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHR 758

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           + +KG + +  +F  +IDG  K GN   A  L   M+
Sbjct: 759 LIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMM 795



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 1/282 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   + +++GL K G+ D   + + EM+  GL  D   Y   I   C +G +  A  +
Sbjct: 522 PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +M  +G   T+  Y  LI GL ++N++ E   +   MRE GV P++ TYN +++  C+
Sbjct: 582 LKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCE 641

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +N A     EML   + PN+ +F +L+   CK  + +A+   F  +A         +
Sbjct: 642 GGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEAL 700

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  + +     G + EA  L             F Y  LI  LC   +LE A  +L ++ 
Sbjct: 701 YTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLI 760

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            +G   +  ++  +IDG+ K G+   A  +  +M E   E N
Sbjct: 761 DKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 256/552 (46%), Gaps = 42/552 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+T I AF + G +EEA+ ++ K+E   V P +   N +++GL   G++D  + F E+M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+   ++TY +L+        +  A  +  EM  KG  P V++Y  LI        +
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVA-----------------DVNR------ 207
            +A  +   M   G+     TYN L+ GYCK                   +VN+      
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454

Query: 208 ------------ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                       AL F  EML  N+ P       L+ GLCK G+   A   +      G 
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +    N L+ G C+AG L EA  +  E+       D  +YN LI G CG  +L+ A  
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L +M K G+  +  TY+ LI G      +E+A+         G+ P+V T+S +IDG C
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA   +     + EM+ K++ P+ VV+  LI    + G +   L L ++M    I+P+  
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SLI G+    R+  A   F E   + +G    PN   Y A+I      GQ++K   L
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEM--RMEG--LEPNVFHYTALIDGYGKLGQMVKVECL 750

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S N+ P+  TYT M+ G  R   + +   LL +M + GIVPD++  +  + GY +
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810

Query: 556 NGDLKSAFRCSE 567
            G +  AF+ S+
Sbjct: 811 QGGVLEAFKGSD 822



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 257/551 (46%), Gaps = 47/551 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC--CGQGDVMK 137
           V P +      +N   K GK +   + + +M   G+  +VVT+  +ID    CG+ D  +
Sbjct: 269 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD--E 326

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A    ++M+++G+EPT++ Y+IL+ GL    ++ +A  + + M + G  PN+  YN L+D
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-- 255
            + +   +N+A+E    M+   L     T+  L+ G CK G+   A      M   G   
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 256 ----FPNIFVYNC-----------------------------LIDGHCKAGNLFEAMSLC 282
               F ++    C                             LI G CK G   +A+ L 
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +        D  T N L+ GLC  G+L+ A  + +++   G + + V+YN+LI G C +
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A     +M ++G++P+  T+S LI G      ++ A+  + +     ++PDV  +
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + +IDG  K    +E    + EM+   + P+    + LI    ++GR+S AL     + D
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL---RED 683

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
               G  SPN   Y ++I+ +    ++ +A  LF +MR + L P+   YT ++ G  +  
Sbjct: 684 MKHKG-ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
           +M+ V  LL +M    + P+ +   VM+ GY  +G++  A   S  L E R      +  
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA---SRLLNEMREKGIVPDSI 799

Query: 583 TTRSFL-GHLK 592
           T + F+ G+LK
Sbjct: 800 TYKEFIYGYLK 810



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 229/512 (44%), Gaps = 67/512 (13%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+     T  +L+       +  K    FD ++ KG+ P V ++T  I+  C   K+ EA
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 292

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M E GV PN+ T+N ++DG       + A  F  +M+   ++P ++T+ +L+ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L +   +  A      M K G  PN+ VYN LID   +AG+L +A+ +   M    +S  
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS------------------- 334
             TYN LIKG C  GQ + AE LL++M   G   N  ++ S                   
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472

Query: 335 ----------------LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                           LI G CK G   KAL +  Q   KG   +  T ++L+ G C+AG
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  +  E++ +  V D V +  LI G      + E      EM++  + P  +T S
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592

Query: 439 SLIHGLFKNGRISNALNFFLE---------------------KTDKTDGGY--------- 468
            LI GLF   ++  A+ F+ +                     K ++T+ G          
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652

Query: 469 -CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V+Y  +I+A C  G++  A +L  DM+   + P++ TYT++++G+    R+ + 
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 712

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +L  +M   G+ P+      ++ GY + G +
Sbjct: 713 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 744



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 210/449 (46%), Gaps = 11/449 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N  V++ LI +F E G + +A     L V + + +  +    N L+ G  K G+ D+   
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY--NTLIKGYCKNGQADNAER 434

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G   +  ++  +I   C       AL    EM+ + + P   + T LI GLC
Sbjct: 435 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              K  +A  ++      G V +  T NAL+ G C+   ++ A     E+L      + V
Sbjct: 495 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 554

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+ G C   +L  A  F   M K G+ P+ + Y+ LI G      + EA+    + 
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  + PDV+TY+++I G C   + E  +    +M  + +  N V YN LI  YC+ G +
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 674

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL +   M  KG+ PN  T++SLI G      ++ A  L+ EM ++ L P+V  +TAL
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K G M +   L +EM    + P+  T + +I G  ++G ++ A     E  +K  
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG- 793

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASK 494
                P+ + Y   I      G +L+A K
Sbjct: 794 ---IVPDSITYKEFIYGYLKQGGVLEAFK 819


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 228/442 (51%), Gaps = 9/442 (2%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV---LIDCCCGQGDVMKALNLF 142
           A  A L GL K GK +  +E    M      +   + G    +I   C  G V  AL+L 
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC--GVVPNLYTYNALMDGYC 200
           + MI +G  P +  +++LI+ LC  +K+ EA+   + M         + ++YN+L++  C
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 201 KVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           K   V++A   +  M+   ++ P+VV++ +L+DG CK+ EL  A   +  M      PN+
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN  ++G  + G + +A  +  EM     SPDV TY+ LI G     + + A  L + 
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G   N VTYN L+ G CKE   ++A  +  +M E+G +P+ VT+++L+ G C  G 
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           I+ A+ ++ EMV K   PDVV +  L+ G  + G   E  +L++ M+  +  P   + + 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL K  R+ +A+  F E+ ++  G  CSP+ V Y ++I  LC + ++ +A K+F ++
Sbjct: 373 MIDGLSKAKRLDDAVEVF-ERMEQDHG--CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 500 RSDNLRPDNCTYTTMLRGLLRA 521
               L PD   +  +L  +  A
Sbjct: 430 DRLKLSPDPHAFNVLLEAMYAA 451



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 228/451 (50%), Gaps = 28/451 (6%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIE------VLPAIQACNALLNGLIKKGKFDSV 103
            N   ++  +    + G IE+A    R ++        P+   C++++  L K G+ DS 
Sbjct: 9   LNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSA 68

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE---PTVVIYTIL 160
               E M+  G   D+ T+ +LI+  C + D ++    F + +++ I     +   Y  L
Sbjct: 69  LSLLETMIKRGYCPDMATHSMLINELC-KADKIQEAQEFLQGMNRTISTRASSCFSYNSL 127

Query: 161 IHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++ LC   K+ +A ++F +M  E  VVP++ +Y+ L+DG+CK+ ++ RA + Y +M+  N
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG------HCKAG 273
             PNV T+   ++GL + G +  A   +  M   G  P++  Y+ LI G      H +A 
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            LFEAM            P+  TYN L+ GLC   + + A  L +KM + G   + VTY 
Sbjct: 248 ELFEAMI------SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYT 301

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +L+ G+C  G +E+A+ V  +M  KG +P+VV ++ L+ G  +AG    A  L+  MV +
Sbjct: 302 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISN 452
              PD V    +IDGLSK   + + + +++ M +    +P + T +SLI GL    R+S 
Sbjct: 362 ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 421

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           A+  F E     D    SP+   +  +++A+
Sbjct: 422 AMKVFKE----IDRLKLSPDPHAFNVLLEAM 448



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 57  TLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM--V 111
           ++I    + G ++ AL +     K    P +   + L+N L K  K     EF + M   
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKM 170
           +    +   +Y  L++  C    V +A  +F  M+ ++ + P VV Y+ILI G C  +++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE +++ M +   VPN+ TYNA ++G  +   +  A   Y EM+     P+V+T+  L
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G     +   A   F  M   G  PN   YNCL+ G CK     EA  L  +M +   
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD  TY  L+ G C VG++E A  +  +M  +G   +VV YN L+ G+ + G   +A  
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGL 409
           +   M  +  +P+ V+ + +IDG  KA  +D A+ ++  M       PD+V + +LI GL
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
             +  + E ++++KE+   K++P     + L+  ++  G
Sbjct: 414 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 11/405 (2%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY---TYNALMDGYCKVADVNRALEF 211
           V +T  + GLC   K+ +A    R+M+E           T ++++   CK   V+ AL  
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF--GVFPNIFVYNCLIDGH 269
              M+     P++ T  +L++ LCK  +++ A  F   M +       + F YN L++  
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131

Query: 270 CKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           CKA  + +A ++ S M  +  + PDV +Y+ILI G C + +L  AE L ++M     + N
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V TYN+ ++G  ++G +  A  V  +M   G  P+V+T+S+LI G   A   D A  L+ 
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFE 251

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            M+ +   P+ V +  L+ GL K+    E   L+++M+E    P   T ++L++G    G
Sbjct: 252 AMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVG 311

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           +I  A+  F E   K   G+  P+ V Y  +++     G+  +A +LF  M S   +PD 
Sbjct: 312 KIEQAVEVFDEMVSK---GH-DPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDT 367

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIK-MGIVPDAVINQVMVRG 552
            ++  M+ GL +AKR+ D + +   M +  G  PD V    ++ G
Sbjct: 368 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 8/387 (2%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-- 217
           +I  LC   ++  A S+  +M + G  P++ T++ L++  CK   +  A EF   M    
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLF 276
                +  ++  L++ LCK  ++  A   F  M ++  V P++  Y+ LIDG CK   L 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A  L  +M      P+V TYN  + GL   G++  A+G+ ++M   G   +V+TY++LI
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            G+      ++A  +   M  +G  PN VT++ L+ G CK    D A  L+ +MV +   
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PD V +T L+ G    G +++ + ++ EM+     P V   + L+ G F+ G+   A   
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRPDNCTYTTML 515
           F     +     C P+ V +  +I  L    ++  A ++F  M  D+   PD  TY +++
Sbjct: 355 FQVMVSRE----CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPD 542
            GL   +R+ + M +  ++ ++ + PD
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPD 437



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 2/329 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           N+LLN L K  K    +  +  MV    +V DVV+Y +LID  C   ++ +A  L+ +MI
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           D    P V  Y   ++GL  + ++ +A+ ++  M   G  P++ TY+ L+ G+      +
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +A E +  M+    +PN VT+  L+ GLCK  +   A   F  M + G  P+   Y  L+
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G C  G + +A+ +  EM      PDV  YN L+KG    G+   A  L Q M      
Sbjct: 305 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK 364

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            + V++N +IDG  K   ++ A+ V  +M +  G  P++VT++SLI G C    +  AM 
Sbjct: 365 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMK 424

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           ++ E+    L PD   F  L++ +   G+
Sbjct: 425 VFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 181/390 (46%), Gaps = 10/390 (2%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV---LMDGLCKVGELRAAG 244
           N   + A + G CK   + +A E    M          + G    ++  LCK G + +A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF--EISPDVFTYNILIK 302
           +    M K G  P++  ++ LI+  CKA  + EA      M +     +   F+YN L+ 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 303 GLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            LC   ++  A  +   M  E  ++ +VV+Y+ LIDG+CK  ++ +A  +  QM +    
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           PNV T+++ ++G  + G I  A G+Y EM+     PDV+ ++ LI G S      +   L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           ++ M+     P+  T + L+HGL K  +   A   F +  ++     C P+ V Y  ++ 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG----CDPDKVTYTTLLY 305

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G+I +A ++F +M S    PD   Y  +L+G  RA +  +   L   M+     P
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           D V + +M+ G  +   L  A    E +++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 153/325 (47%), Gaps = 40/325 (12%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEV 80
           +L K++K H   +++F+ + S      +   +S LI  F ++  +  A  +Y++   +  
Sbjct: 130 SLCKAKKVHQA-FAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P +   NA LNGL++KG+       YEEM+  G   DV+TY  LI          +A  
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           LF+ MI +G  P  V Y  L+HGLC E+K  EA  +FR M E G  P+  TY  L+ G+C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFG-------------------------------- 228
            V  + +A+E + EM+     P+VV +                                 
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368

Query: 229 ---VLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
              +++DGL K   L  A   F  M +  G  P++  YN LI G C    L EAM +  E
Sbjct: 369 SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 428

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQ 309
           +++ ++SPD   +N+L++ +   G 
Sbjct: 429 IDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 244/515 (47%), Gaps = 40/515 (7%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++ L++ G      E Y  MV  GL   + T+  L+     + ++   + L +EM  
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+ P +  YTI I  L  + K+ EA  + + M + G  P++ TY  L+D  C    ++ 
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+  + +M   + +P+ VT+  L+D     G L      +  M   G  P++  +  L++
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             CKAG + EA  L   M K  + P++ TYN LI GL    +L+ A  L   M   G+  
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV----------------------- 364
              TY  LID + K G   KAL    +M  +G+ PN+                       
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497

Query: 365 ------------VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
                       VT++ ++    K G +D A+ L +EM      PDV+V  +LID L K 
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G ++E  +++  M E  + P+V T + L+ GL K G+I  A+  F    +  +G  CSPN
Sbjct: 558 GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF----ESMNGHGCSPN 613

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            + +  ++  LC + ++  A K+F  M + N RPD  T+ T++ G ++  ++ + + L  
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
            M K+ + PD V    ++ G  ++G ++ AFR +E
Sbjct: 674 QMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITE 707



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 39/547 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI A      +++A+ ++ K++     P       LL+     G  D V + + EM
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   DVVT+ +L++  C  G + +A +L D M  +G+ P +  Y  LI GL   N++
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +F +M   GV P  YTY  L+D + K     +ALE + +M    + PN+V     
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +  L ++G L  A   F  +   G+ P+   YN ++  + K G + EA+ L SEM K + 
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV   N LI  L   G++E A  +  +M +  +   VVTYN L+ G  KEG ++KA+ 
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           +   M   G  PN +TF++L+D  CK   +D A+ ++ +M   +  PDV+ F  +I G  
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL----NFFLEKTDKTDG 466
           K   +K  + L+ +M +  + P   T+ +L+ G+ K+G+I +A     +FF +     D 
Sbjct: 661 KQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719

Query: 467 GY-----------------------------CSPNHVLYAAIIQALCYDGQILKASKLFS 497
            +                             C  + VL   II+ LC   +   A  +F 
Sbjct: 720 SFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVL-IPIIKVLCKHKKTSVARNVFV 778

Query: 498 DMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
               +  ++P    Y  ++ G L    +     L  +M   G  PD      ++  + ++
Sbjct: 779 KFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKS 838

Query: 557 GDLKSAF 563
           G +   F
Sbjct: 839 GKINELF 845



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 254/541 (46%), Gaps = 18/541 (3%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           +F+ + SL +    P+ ++   LI    + GH  +AL  + K++   + P I ACNA L 
Sbjct: 426 LFSNMESLGV---EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L + G+       + E+   GL  D VTY +++ C    G V +A+ L  EM     EP
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V++   LI  L    ++ EA  MF  M E  + P + TYN L+ G  K   + +A++ +
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
             M  H   PN +TF  L+D LCK  E+  A   F  M      P++  +N +I G  K 
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM-YKEGILANVVT 331
             +  A+ L  +M+K  + PD  T   L+ G+   GQ+E A  + +   Y+ G   +   
Sbjct: 663 NQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +  ++ G   E   EKA+    ++  + +  +      +I   CK      A  ++ +  
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781

Query: 392 IK-SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +  + P + V+  LIDG  +  N++    L++EM  A   P  FT +SLI    K+G+I
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
           +   + + E   +     C PN + Y  +I  L    ++ KA  L+ ++ S +  P  CT
Sbjct: 842 NELFDLYDEMLTRG----CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           +  ++ GLL++ R+ D   +   M+  G  P++ I  ++V GY + G + +A    EF K
Sbjct: 898 FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTA---CEFFK 954

Query: 571 E 571
            
Sbjct: 955 R 955



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 226/467 (48%), Gaps = 10/467 (2%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLII--AFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           +V   L  +E     P++++  I        G I+EA  + ++++     P +     L+
Sbjct: 247 TVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLI 306

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           + L    K D     + +M       D VTY  L+D     G + K   ++ EM   G  
Sbjct: 307 DALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P VV +TIL++ LC   ++ EA  +  +MR+ GV+PNL+TYN L+ G  +   ++ AL+ 
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           +  M    ++P   T+ +L+D   K G    A   F  M   G+ PNI   N  +    +
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAE 486

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G L EA ++ +E++   ++PD  TYN+++K    VGQ++ A  LL +M K     +V+ 
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV 546

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            NSLID   K G +E+A  +  +M E  + P VVT++ L+ G  K G I  A+ L+  M 
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
                P+ + F  L+D L K+  +   L+++ +M      P V T +++IHG  K  +I 
Sbjct: 607 GHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIK 666

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           NA+  F +           P+HV    ++  +   GQI  A ++  D
Sbjct: 667 NAIWLFHQMKK-----LLRPDHVTLCTLLPGVIKSGQIEDAFRITED 708



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 248/546 (45%), Gaps = 46/546 (8%)

Query: 37   SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNG 93
            ++FN L S  +   +   ++ ++  +S++G ++EA+ +     K++  P +   N+L++ 
Sbjct: 495  AMFNELKSSGLAP-DSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553

Query: 94   LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            L K G+ +  W+ +  M    L   VVTY +L+     +G + KA+ LF+ M   G  P 
Sbjct: 554  LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613

Query: 154  VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
             + +  L+  LC  +++  A  MF  M      P++ T+N ++ G+ K   +  A+  +H
Sbjct: 614  TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673

Query: 214  EMLHHNLQPNVVTFGVLMDGLCKVGEL----RAAGNFFVHMAK-----------FGVFPN 258
            +M    L+P+ VT   L+ G+ K G++    R   +FF  +              G+   
Sbjct: 674  QM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTE 732

Query: 259  IFVYNCLIDGH---CKA-----GNLFEAMSLCSEMEKFEISPDVFT-------------- 296
                  ++ G    C+A       L   + +  + +K  ++ +VF               
Sbjct: 733  AGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV 792

Query: 297  YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
            YN+LI G   V  +E A  L ++M   G   +  TYNSLID + K G + +   +  +M 
Sbjct: 793  YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEML 852

Query: 357  EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             +G +PN +T++ +I    K+  +D AM LY  +V     P    F  LIDGL K G + 
Sbjct: 853  TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD 912

Query: 417  ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
            +   ++  M+     P+    + L++G  K G +  A  FF     +       P+   Y
Sbjct: 913  DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG----IRPDLKSY 968

Query: 477  AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
              ++  LC  G++  A   F  ++   L PD   Y  M+ GL R++R  + + L  +M  
Sbjct: 969  TILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028

Query: 537  MGIVPD 542
             GIVPD
Sbjct: 1029 RGIVPD 1034



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 220/465 (47%), Gaps = 43/465 (9%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFD---------- 101
             F+T+I  F +   I+ A+W++ +++ L  P       LL G+IK G+ +          
Sbjct: 651  TFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFF 710

Query: 102  ---------SVWE-----------------FYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
                     S WE                 F E +V   +  D      +I   C     
Sbjct: 711  YQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKT 770

Query: 136  MKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              A N+F +   + G++PT+ +Y +LI G    + +  A ++F  M+  G  P+ +TYN+
Sbjct: 771  SVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNS 830

Query: 195  LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            L+D + K   +N   + Y EML    +PN +T+ +++  L K   L  A + + ++    
Sbjct: 831  LIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD 890

Query: 255  VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              P    +  LIDG  K+G L +A  +   M  +   P+   YNIL+ G   +G ++ A 
Sbjct: 891  FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               ++M KEGI  ++ +Y  L+D  C  G ++ AL    ++ + G++P++V ++ +I+G 
Sbjct: 951  EFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010

Query: 375  CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
             ++   + A+ L+ EM  + +VPD+  + +LI  L   G ++E  ++Y+E+    + P+V
Sbjct: 1011 GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNV 1070

Query: 435  FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            FT ++LI G   +G    A   +     K   G C PN   +A +
Sbjct: 1071 FTYNALIRGYTLSGNSELAYGIY----KKMMVGGCDPNTGTFAQL 1111



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 232/542 (42%), Gaps = 86/542 (15%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V ++LI    + G +EEA  ++ ++E   + P +   N LL GL K+G+     + +E M
Sbjct: 546  VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605

Query: 111  VLCGLVADVVTYGVLIDCCCG-----------------------------------QGDV 135
               G   + +T+  L+DC C                                    Q  +
Sbjct: 606  NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665

Query: 136  MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA----ESMF--------RSMRE- 182
              A+ LF +M  K + P  V    L+ G+    ++ +A    E  F        RS  E 
Sbjct: 666  KNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWED 724

Query: 183  --CGVVPNLYTYNALMDG-------YCKVADV------------------NRALEFYHEM 215
               G++    T  A++ G        CK   V                  N  ++F  E+
Sbjct: 725  VMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL 784

Query: 216  LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                ++P +  + +L+DG  +V  +  A N F  M   G  P+ F YN LID H K+G +
Sbjct: 785  ---GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 276  FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             E   L  EM      P+  TYN++I  L    +L+ A  L   +          T+  L
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 336  IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
            IDG  K G ++ A  +   M   G  PN   ++ L++G  K G++D A   +  MV + +
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 396  VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
             PD+  +T L+D L   G + + L  ++++ +A + P +   + +I+GL ++ R   AL+
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 456  FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             F E  ++       P+   Y ++I  L   G I +A K++ +++   L+P+  TY  ++
Sbjct: 1022 LFHEMQNRG----IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077

Query: 516  RG 517
            RG
Sbjct: 1078 RG 1079



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 184/401 (45%), Gaps = 43/401 (10%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALE---FYHEMLHHNL-QPNVVTFGVLMDGLCK 236
           +  G +PN+       +   ++  V+R +E   F  +++   + + NV T+ ++   L  
Sbjct: 112 KSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFI 171

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G LR A +    M + G   N + YN LI    ++G   EA+ +   M    + P + T
Sbjct: 172 RGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKT 231

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           ++ L+        ++   GLL++M   G+  N+ TY   I    ++G +++A  +  +M 
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           + G  P+VVT++ LID  C A  +D AM L+T+M   S  PD V +  L+D  S  G++ 
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLD 351

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           +  +++ EM EA                                      GY +P+ V +
Sbjct: 352 KVEKIWTEM-EAD-------------------------------------GY-APDVVTF 372

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             ++ ALC  G+I +A  L   MR   + P+  TY T++ GLLRA R+ D + L ++M  
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           +G+ P A    +++  + ++G    A    E +K   I  +
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 242/467 (51%), Gaps = 6/467 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           N LL+ LIK  ++++V   Y  +     +   ++T+ +LI+     G +  A +L   ++
Sbjct: 73  NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             G +  V I T L+ GLC + +++EA S+     + G   +   Y  +++G CK+    
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A++ + +M    + PN++ +  ++DGLCK G +  A      M + G+  +++ YN +I
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252

Query: 267 DGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
            G C  G    A+ L  EM  + ++ PDV+T+NILI GLC +G++  A  ++  M K G 
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             ++V+YN+L++GYC  G + +A  V  +M E+   PNV+++ +LI+G CK   +D AM 
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMV 372

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L TEM  K+LVPD V +  L+DGLSK G       L + M  +     + T + L+   F
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYF 432

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K+ +   AL  F    +       SPN   Y  ++  LC  G++  A ++F  + +   +
Sbjct: 433 KHEKFDKALALFQHIIEIG----ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           P+  TY  M+ GL +   + +   LL  M+    +P+ +    +VR 
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 232/460 (50%), Gaps = 12/460 (2%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLP---AI 84
           K ++   S++  L S   P   PS+  FS LI AF+++G +  A  +   I  +     +
Sbjct: 83  KRYNAVVSLYTILQSK--PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDV 140

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
           +    L+ GL  KG+         E V  G   D V YG +I+  C  G    A+ +F +
Sbjct: 141 RILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPK 200

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M    + P +++Y  +I GLC +  + EA  +   M E G+  ++Y+YN+++ G+C V  
Sbjct: 201 MKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGR 260

Query: 205 VNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
              A++   EM+    + P+V TF +L+DGLCK+G +  A N    M K G  P+I  YN
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L++G+C +G++ EA  +  +M +    P+V +Y  LI G C V  ++ A  LL +M+ +
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
            ++ + VTYN L+DG  K G       +   M   G   +++T++ L+D   K    D A
Sbjct: 381 NLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKA 440

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L+  ++   + P++  +  L+DGL K G +K    +++ +      P++ T + +IHG
Sbjct: 441 LALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHG 500

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           L K G +  A     +  +        PN++ +  I++A+
Sbjct: 501 LCKEGFLDEAEALLYKMVNNN----YLPNYITFDTIVRAI 536



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 187/358 (52%), Gaps = 1/358 (0%)

Query: 89  ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
            ++NGL K GK     + + +M    +  +++ Y  +ID  C QG V +A  L  EM++ 
Sbjct: 180 TIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVEN 239

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG-VVPNLYTYNALMDGYCKVADVNR 207
           GIE  V  Y  +IHG C+  +   A  +   M   G V P++YT+N L+DG CK+  V+ 
Sbjct: 240 GIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSE 299

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A      M+    +P++V++  LM+G C  G +  A   F  M +    PN+  Y  LI+
Sbjct: 300 AYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLIN 359

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK   + EAM L +EM    + PD  TYN L+ GL   G+      L++ M   G  A
Sbjct: 360 GYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPA 419

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +++TYN L+D Y K    +KAL++   + E G+ PN+ T++ L+DG CK+G +  A  ++
Sbjct: 420 DLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIF 479

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
             +  K   P++  +  +I GL K+G + E   L  +M+     P+  T  +++  + 
Sbjct: 480 QLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           +N L+    K+   N  +  Y  +     ++P+++TF +L++   ++G++  A +   ++
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G   ++ +   L+ G C  G + EA+SL  E        D   Y  +I GLC +G+ 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A  +  KM K  +  N++ YN++IDG CK+G +++A  +C++M E G+E +V +++S+
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           I G C  G   AA+ L  EMV++  V PDV  F  LIDGL K G + E   +   M++  
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P + + ++L++G   +G +  A   F +  ++T      PN + Y  +I   C    +
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT----ALPNVISYCTLINGYCKVRMV 367

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A  L ++M + NL PD  TY  +L GL ++ R L    L+  M   G   D +   V+
Sbjct: 368 DEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVL 427

Query: 550 VRGYQENGDLKSAFRCSEFLKE 571
           +  Y ++     A    + + E
Sbjct: 428 LDDYFKHEKFDKALALFQHIIE 449



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 5/379 (1%)

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + P+L T++ L++ + ++  +  A      +L    Q +V     LM GLC  G +  A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           +        G   +   Y  +I+G CK G   +A+ +  +M+K  + P++  YN +I GL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPN 363
           C  G ++ A GL  +M + GI  +V +YNS+I G+C  G  + A+ +  +M  +G V P+
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           V TF+ LIDG CK G +  A  +   M+ +   PD+V + AL++G    G++ E  +++ 
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           +M+E    P+V +  +LI+G  K   +  A+    E  +K       P+ V Y  ++  L
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKN----LVPDTVTYNCLLDGL 396

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              G+ L    L   MR+     D  TY  +L    + ++    + L   +I++GI P+ 
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456

Query: 544 VINQVMVRGYQENGDLKSA 562
               +++ G  ++G LK A
Sbjct: 457 RTYNILLDGLCKSGRLKYA 475


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 247/527 (46%), Gaps = 12/527 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN--ALLNGLIKKGKFDSVWEFYE 108
           +P   +T++    +      A+ ++ K+  L A+       L++ L K    D       
Sbjct: 45  DPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLL 104

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M   G+    + + V+I   C  G +  AL ++ +M D    P  + YT L+HGL    
Sbjct: 105 DMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAG 163

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ +A  + + M     VP+  T   ++   C    V+ A E   EMLH  +  N +T+ 
Sbjct: 164 RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 223

Query: 229 VLMDGLCKVGELRAAGNFFV-HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            L+DGLCK   L  A    +  + + G  P+I  Y+ +IDG CKAG L +A+ +  EM  
Sbjct: 224 ALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS- 282

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
              +P   TYN LI G C  G ++ A  LL KM  +    +V+TY +L+  +CK G ++ 
Sbjct: 283 --CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDD 340

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM    + P+VVTF+SL+DG C  G ++ A+ L  E+  +   P +  +  ++D
Sbjct: 341 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVD 400

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K   +++   L  +       P+  T + L+ G  + GR   AL +  +    ++GG
Sbjct: 401 GYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL--NSEGG 458

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C  +  +YA I+ ALC DG+   A + + +M      P   T+ T++  L +A +    
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
             LL +MIK G  P       +V  Y   G ++ A    E   E R+
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA---DELASELRL 562



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 206/423 (48%), Gaps = 13/423 (3%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGL 94
           V+  +N    P F    ++ L+   S+ G + +A+ V +++     +P       ++  L
Sbjct: 137 VYRQMNDAHPPDF--LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL 194

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID--CCCGQGDVMKALNLFDEMIDKGIEP 152
               + D   E  EEM+  G+ A+ +TY  L+D  C C + D   AL L  E+  +G  P
Sbjct: 195 CLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL-LLGEVTRRGFTP 253

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            +V Y+ +I GLC   ++ +A  +F  M      P   TYN+L+ GYC+  D++ A+   
Sbjct: 254 DIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLL 310

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +M+  N  P+V+T+  LM   CK+G L  A   F  M    + P++  +  L+DG C  
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G + +A+ L  E+ +    P ++TYN ++ G C   Q+  AE L+      G + N VTY
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           N L+ G C+ G  ++AL    Q+  +G     +V  ++ ++D  C+ G  D A+  Y EM
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + +  VP    F  ++  L K    ++   L +EM++   TP   T  +++    + G I
Sbjct: 491 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 550

Query: 451 SNA 453
             A
Sbjct: 551 QKA 553



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 216/425 (50%), Gaps = 10/425 (2%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L DE+ D+G+ P  V    ++  LC+      A ++F  M E G V N  TY  L+   C
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLC 91

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   ++ A+    +M    + P  +   V++ GLC+ G LR A   +  M      P+  
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFL 150

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  L+ G  KAG L +A+ +  EM      PD  T  ++++ LC   +++ A  L+++M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALS-VCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
              G+ AN +TY++L+DG CK   +++A++ +  ++T +G  P++VT+S++IDG CKAG 
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A+ ++ EM   S  P  + + +LI G  + G+M E +RL  +M++    P V T ++
Sbjct: 271 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+    K GR+ +A   F +          SP+ V + +++  LC +G++  A +L  ++
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMV----ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                 P   TY  ++ G  ++ ++     L+AD    G VP+ V   ++V G    G  
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 560 KSAFR 564
             A +
Sbjct: 444 DQALQ 448



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 175/368 (47%), Gaps = 14/368 (3%)

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+    L P+ V    ++  LC   +   A   F  MA+ G   +   YN LI   CKA 
Sbjct: 36  EIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKAR 94

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L EAM L  +M+   ++P    +N++I GLC  G+L  A G+ ++M  +    + +TY 
Sbjct: 95  LLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYT 153

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            L+ G  K G +  A+ V  +M      P+  T + ++   C    +D A  L  EM+ +
Sbjct: 154 KLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLY-KEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            +  + + ++AL+DGL K   + E + L   E+     TP + T S++I GL K GR+ +
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A++ F E +       C+P  + Y ++I   C  G + +A +L   M  DN  PD  TYT
Sbjct: 274 AVDIFEEMS-------CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE- 571
           T++    +  R+ D   L   M+   + PD V    +V G    G ++ A    E L+E 
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL---ELLEEI 383

Query: 572 SRIGSSET 579
           +R G   T
Sbjct: 384 TRRGCPPT 391



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 152/310 (49%), Gaps = 4/310 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           F P +  +ST+I    + G + +A+ ++ ++   P     N+L+ G  + G  D      
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLL 310

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV      DV+TY  L+   C  G +  A  LF +M+   + P VV +T L+ GLC E
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M +A  +   +   G  P +YTYN ++DGYCK   V +A E   +       PN VT+
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430

Query: 228 GVLMDGLCKVGELRAAGNFFVHM-AKFGVFP-NIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +L+ G C+ G    A  +   + ++ G  P ++ +Y  ++D  C+ G   +A+    EM
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            +    P   T+  ++  LC   Q + A  LL++M K G      T ++++  YC+ G +
Sbjct: 491 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 550

Query: 346 EKALSVCSQM 355
           +KA  + S++
Sbjct: 551 QKADELASEL 560



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 40/275 (14%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++LI  +   G ++EA+ +  K+      P +     L++   K G+ D  +E +++M
Sbjct: 289 TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQM 348

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V   L  DVVT+  L+D  CG+G +  AL L +E+  +G  PT+  Y  ++ G C  N++
Sbjct: 349 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQV 408

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE-------------------- 210
            +AE +    R  G VPN  TYN L+ G C+    ++AL+                    
Sbjct: 409 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 468

Query: 211 -----------------FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
                            FY EM+     P   TF  ++  LCK  + + A      M K+
Sbjct: 469 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 528

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           G  P     + ++  +C+AG + +A  L SE+  +
Sbjct: 529 GHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 244/533 (45%), Gaps = 42/533 (7%)

Query: 61  AFSEMGHIEEALWV-YRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           AF+  G  + AL   YR +  L      A +  N L++ L+++    +V      M   G
Sbjct: 105 AFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDG 164

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +V TY +L+   C    V  A  + DEM  KG  P  V Y  ++  LC   ++ EA 
Sbjct: 165 VQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEAT 224

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +  +       P   +YNA++   C+   +        +M+   LQPNV+T+  +++  
Sbjct: 225 EVLSA-----APPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAF 279

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK GELR A      M   G  PN+  +  L+ G    G + +A+ +   M     +P  
Sbjct: 280 CKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPST 339

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +YN+LI+GLC VG L+GA  +L  M + G   N  TY++LIDG+ K GD++ A+S+ + 
Sbjct: 340 VSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWND 399

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           MT  G +PNVV +++++   CK    + A  L  +M++++  P+ V F  LI  L     
Sbjct: 400 MTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRR 459

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD-----------K 463
           +   L ++ EM      P+  T + L+HGLF+ G   +AL   +E  +            
Sbjct: 460 VGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNT 519

Query: 464 TDGGYCS--------------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
              G C                     P+   + AII A C +G++  A+ +   M   N
Sbjct: 520 VVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVN 579

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
              +   YT ++  L    ++ D M+ L  M+  GI P+ V   V+VRG   N
Sbjct: 580 CGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 211/429 (49%), Gaps = 6/429 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           + T++ A   +G ++EA  V       P   + NA++  L ++ +   V+    +MV  G
Sbjct: 207 YGTIVSALCTLGRVDEATEVLSAAP--PVAASYNAVILALCREFRMQEVFAVVGDMVGRG 264

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           L  +V+TY  +++  C  G++  A  +   M+  G  P V  +T L+ GL N+ ++ +A 
Sbjct: 265 LQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDAL 324

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            M++ M   G  P+  +YN L+ G C V D+  A    ++M  H   PN  T+  L+DG 
Sbjct: 325 DMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGF 384

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K G+L  A + +  M + G  PN+ VY  ++   CK     +A SL  +M      P+ 
Sbjct: 385 SKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNT 444

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N LI+ LC   ++  A G+  +M + G   N  TYN L+ G  +EG+   AL +  +
Sbjct: 445 VTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIE 504

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G+E ++VT+++++ G C+      AM     M+++ + PD   FTA+I    K+G 
Sbjct: 505 MQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGE 564

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           ++    +   M       ++   + L+  L    ++ +A+ + L+     +G Y  PN V
Sbjct: 565 VRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKML--YEGIY--PNTV 620

Query: 475 LYAAIIQAL 483
            +  +++ +
Sbjct: 621 TWNVLVRGV 629



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 228/513 (44%), Gaps = 37/513 (7%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           A +A  A +  L   G  D V    +EM L G+          +      G   +AL  F
Sbjct: 60  AARAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTF 119

Query: 143 DEMI-DKG-IEPTVV-IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
              + D G   PT   +Y  LI  L  EN +     +  +MR+ GV PN++TYN L+   
Sbjct: 120 YRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRAL 179

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG--------------------- 238
           C+   V  A +   EM      P+ VT+G ++  LC +G                     
Sbjct: 180 CQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNA 239

Query: 239 -------ELRAAGNFFV--HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
                  E R    F V   M   G+ PN+  Y  +++  CKAG L  A ++ + M    
Sbjct: 240 VILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITG 299

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            +P+V T+  L+ GL   G++  A  + + M  EG   + V+YN LI G C  GD++ A 
Sbjct: 300 CTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGAS 359

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           SV + M + G  PN  T+S+LIDG  KAG++D A+ ++ +M      P+VVV+T ++   
Sbjct: 360 SVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVF 419

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K     +   L  +ML     P+  T ++LI  L    R+  AL  F E         C
Sbjct: 420 CKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG----C 475

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN   Y  ++  L  +G    A ++  +M++  +     TY T++ GL + +   + M 
Sbjct: 476 PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  MI  GI PDA     ++  Y + G+++ A
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMA 568



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 5/380 (1%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLN 92
           VF  +  +      P+V  ++T++ AF + G +  A  +  ++ +    P +    AL+ 
Sbjct: 253 VFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVG 312

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL   G+     + ++ MV  G     V+Y VLI   C  GD+  A ++ ++M   G  P
Sbjct: 313 GLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFP 372

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y+ LI G      +  A S++  M   G  PN+  Y  ++  +CK    N+A    
Sbjct: 373 NARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLI 432

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +ML  N  PN VTF  L+  LC    +  A   F  M + G  PN   YN L+ G  + 
Sbjct: 433 DKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFRE 492

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN  +A+ +  EM+   I   + TYN ++ GLC +     A   + +M   GI  +  T+
Sbjct: 493 GNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTF 552

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            ++I  YCKEG++  A  +   M       N++ ++ L+   C    ++ AM    +M+ 
Sbjct: 553 TAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLY 612

Query: 393 KSLVPDVVVFTALIDGLSKD 412
           + + P+ V +  L+ G+ ++
Sbjct: 613 EGIYPNTVTWNVLVRGVFRN 632



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 15/395 (3%)

Query: 174 ESMFRSMRECG----VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           ++ +R++ + G      P LY  N L+D   +   V         M    +QPNV T+ +
Sbjct: 117 KTFYRAVHDLGCARPTAPRLY--NHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNL 174

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  LC+   + AA      MA  G  P+   Y  ++   C  G + EA  + S      
Sbjct: 175 LVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA---- 230

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P   +YN +I  LC   +++    ++  M   G+  NV+TY ++++ +CK G++  A 
Sbjct: 231 -PPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMAC 289

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++ ++M   G  PNV TF++L+ G    G +  A+ ++  MV +   P  V +  LI GL
Sbjct: 290 AILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGL 349

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
              G++K    +  +M +    P+  T S+LI G  K G +  A++ +    D T  G C
Sbjct: 350 CSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIW---NDMTRSG-C 405

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN V+Y  ++   C      +A  L   M  +N  P+  T+ T++R L   +R+   + 
Sbjct: 406 KPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALG 465

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +  +M + G  P+      ++ G    G+   A +
Sbjct: 466 VFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQ 500



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 3/204 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+TLI +      +  AL V+   R+    P  +  N LL+GL ++G      +  
Sbjct: 443 NTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMV 502

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   G+   +VTY  ++   C      +A+     MI +GI+P    +T +IH  C E
Sbjct: 503 IEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKE 562

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++  A  +  +M       N+  Y  LM   C    +  A+ +  +ML+  + PN VT+
Sbjct: 563 GEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTW 622

Query: 228 GVLMDGLCKVGELRAAGNFFVHMA 251
            VL+ G+ +        +F  H+A
Sbjct: 623 NVLVRGVFRNLGCNNPSDFIQHIA 646


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 281/557 (50%), Gaps = 12/557 (2%)

Query: 11  YKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEE 70
           Y ++  +   +   L ++R  +HV   +   + S E  K +  V  ++I  + +    ++
Sbjct: 39  YAHSAVVYHHILRRLSETRMVNHVS-RIVELIRSQEC-KCDEDVALSVIKTYGKNSMPDQ 96

Query: 71  ALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
           AL V++++  +    PAI++ N LLN  ++  ++  V   +      G+  ++ TY VLI
Sbjct: 97  ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156

Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              C + +  KA    D M  +G +P V  Y+ +I+ L    K+ +A  +F  M E GV 
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           P++  YN L+DG+ K  D   A+E +  +L   ++ PNV T  +++ GL K G +     
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            +  M +     +++ Y+ LI G C AGN+ +A S+ +E+++ + S DV TYN ++ G C
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+++ +  L + M  +  + N+V+YN LI G  + G +++A  +   M  KG   +  
Sbjct: 337 RCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKT 395

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+   I G C  G ++ A+G+  E+       DV  + ++ID L K   ++E   L KEM
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            +  +  +    ++LI GL ++ R+  A +FFL +  K     C P  V Y  +I  LC 
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNG---CRPTVVSYNILICGLCK 511

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G+  +AS    +M  +  +PD  TY+ +L GL R +++   + L    ++ G+  D ++
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571

Query: 546 NQVMVRGYQENGDLKSA 562
           + +++ G    G L  A
Sbjct: 572 HNILIHGLCSVGKLDDA 588



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 248/523 (47%), Gaps = 11/523 (2%)

Query: 46  EIPKFNPSV--FSTLIIAFSEMGH---IEEALWVYRKIEVLPAIQACNALLNGLIKKGKF 100
           EI    P++  ++TL+ AF E      +E     +    V P +Q  N L+    KK +F
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           +    F + M   G   DV +Y  +I+     G +  AL LFDEM ++G+ P V  Y IL
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225

Query: 161 IHGLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           I G   E     A  ++ R + +  V PN+ T+N ++ G  K   V+  L+ +  M  + 
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            + ++ T+  L+ GLC  G +  A + F  + +     ++  YN ++ G C+ G + E++
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            L   ME  + S ++ +YNILIKGL   G+++ A  + + M  +G  A+  TY   I G 
Sbjct: 346 ELWRIMEH-KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C  G + KAL V  ++   G   +V  ++S+ID  CK   ++ A  L  EM    +  + 
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
            V  ALI GL +D  + E     +EM +    P+V + + LI GL K G+   A  F  E
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
                + G+  P+   Y+ ++  LC D +I  A +L+       L  D   +  ++ GL 
Sbjct: 525 ---MLENGW-KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              ++ D M ++A+M       + V    ++ G+ + GD   A
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 247/509 (48%), Gaps = 11/509 (2%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           F P VFS  T+I   ++ G +++AL ++ ++    V P +   N L++G +K+    +  
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239

Query: 105 EFYEEMVL-CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           E ++ ++    +  +V T+ ++I      G V   L +++ M     E  +  Y+ LIHG
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC+   + +AES+F  + E     ++ TYN ++ G+C+   +  +LE +  M H N   N
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVN 358

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +V++ +L+ GL + G++  A   +  M   G   +   Y   I G C  G + +A+ +  
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           E+E      DV+ Y  +I  LC   +LE A  L+++M K G+  N    N+LI G  ++ 
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + +A     +M + G  P VV+++ LI G CKAG    A     EM+     PD+  ++
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            L+ GL +D  +   L L+ + L++ +   V   + LIHGL   G++ +A+        +
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C+ N V Y  +++     G   +A+ ++  M    L+PD  +Y T+++GL   + 
Sbjct: 599 N----CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +   M    D    GI P      ++VR 
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILVRA 683



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 223/437 (51%), Gaps = 10/437 (2%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +AL++F  M +  G EP +  Y  L++      + V+ ES+F      GV PNL TYN L
Sbjct: 96  QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   CK  +  +A  F   M     +P+V ++  +++ L K G+L  A   F  M++ GV
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            P++  YN LIDG  K  +   AM L    +E   + P+V T+NI+I GL   G+++   
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            + ++M +     ++ TY+SLI G C  G+++KA SV +++ E+    +VVT+++++ G 
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C+ G I  ++ L+  M  K+ V ++V +  LI GL ++G + E   +++ M         
Sbjct: 336 CRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T    IHGL  NG ++ AL    E   ++ GG+       YA+II  LC   ++ +AS 
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEV--ESSGGHLDV--YAYASIIDCLCKKKRLEEASN 450

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M    +  ++     ++ GL+R  R+ +    L +M K G  P  V   +++ G  
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510

Query: 555 ENGDLKSAFRCSEFLKE 571
           + G    A   S F+KE
Sbjct: 511 KAGKFGEA---SAFVKE 524



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 194/372 (52%), Gaps = 3/372 (0%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ--ACNALLNGL 94
           SVFN L+  +    +   ++T++  F   G I+E+L ++R +E   ++   + N L+ GL
Sbjct: 311 SVFNELDERK-ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGL 369

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           ++ GK D     +  M   G  AD  TYG+ I   C  G V KAL +  E+   G    V
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  +I  LC + ++ EA ++ + M + GV  N +  NAL+ G  + + +  A  F  E
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  +  +P VV++ +L+ GLCK G+   A  F   M + G  P++  Y+ L+ G C+   
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A+ L  +  +  +  DV  +NILI GLC VG+L+ A  ++  M      AN+VTYN+
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L++G+ K GD  +A  +   M + G++P+++++++++ G C    +  AM  + +     
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669

Query: 395 LVPDVVVFTALI 406
           + P V  +  L+
Sbjct: 670 IFPTVYTWNILV 681



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 197/413 (47%), Gaps = 5/413 (1%)

Query: 35  CYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALL 91
           C  ++  +   E  K +   +S+LI    + G++++A  V+ +++   A   +   N +L
Sbjct: 274 CLKIWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
            G  + GK     E +  M     V ++V+Y +LI      G + +A  ++  M  KG  
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
                Y I IHGLC    + +A  + + +   G   ++Y Y +++D  CK   +  A   
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             EM  H ++ N      L+ GL +   L  A  F   M K G  P +  YN LI G CK
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG   EA +   EM +    PD+ TY+IL+ GLC   +++ A  L  +  + G+  +V+ 
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N LI G C  G ++ A++V + M  +    N+VT+++L++G  K G+ + A  ++  M 
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
              L PD++ +  ++ GL     +   +  + +     I P+V+T + L+  +
Sbjct: 632 KMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 58  LIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           LI     +G +++A+ V   +E       +   N L+ G  K G  +     +  M   G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           L  D+++Y  ++   C    V  A+  FD+  + GI PTV  + IL+  + N 
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 236/500 (47%), Gaps = 10/500 (2%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDS 102
            +P  N   ++TLI A+   G +  A   L    +  + P   A  + + G  + G F  
Sbjct: 68  RMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAH 127

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
               +  M   G      TY  L+   CG G V +A+ +F  M   G  P   +Y+I++H
Sbjct: 128 ACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVH 187

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC   +  EA ++       G VPN+  YNAL+DGYC   D+  A++ +  M      P
Sbjct: 188 GLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLP 247

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           NV T+  L+ G CK G++  A   +  M + G+ PN+  Y  LI G C  G+L  A  L 
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             ME   ++P+ +T  +LI  LC  G++E A+  L  + ++GI  N V Y S+ID  CK 
Sbjct: 308 HSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G  + A ++  ++  +G  P+   +SSLIDG C+   +  A+ L  +M+   +  + V F
Sbjct: 368 GKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPF 427

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LID   ++        +   M  A + P V T +  I    ++GR+ +A +  ++  D
Sbjct: 428 TILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMID 487

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
                   PN   Y  +I+     G + +A     +M  +  +P++ +YT +L  LL+  
Sbjct: 488 HG----VRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKN 543

Query: 523 RMLDVMMLLADMIKMGIVPD 542
              D   L+AD I +  + D
Sbjct: 544 SYHD---LVADSISLWKIVD 560



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 201/399 (50%), Gaps = 8/399 (2%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P +     L+  L     + + ES+   M     V NL+TY  L++ YC   D+  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              +L   L P+   +   + G C+ G    A   F+ M + G     F Y  L+ G C 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           AG + EAM++ + M     +PD   Y+I++ GLCG G+   A  LL     +G + NV  
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN+LIDGYC  GD+E A+ +   M  KG  PNV T++ LI G CK+G ++ AM LY+ M+
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P+VV +T LI G   +G+++   RL   M    + P+ +T   LI  L K+GRI 
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A  F      K        N V+Y ++I ALC  G+   A  L   + ++   PD   Y
Sbjct: 337 EAQQFLGSLVQKG----IKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           ++++ GL R  ++L+ + LL DMI+ G+  +AV   +++
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 230/516 (44%), Gaps = 55/516 (10%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P +   NAL++G    G  +   + ++ M   G + +V TY  LI   C  G V +A+ 
Sbjct: 211 VPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV 270

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L+  MI+ G+ P VV YT LI G C+E  +  A  +  SM  CG+ PN +T   L+D  C
Sbjct: 271 LYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  A +F   ++   ++ N V +  ++D LCK G+   A N    +   G  P+  
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEM--------------------EKFE----------- 289
           +Y+ LIDG C+   L EA+SL ++M                     +F            
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRM 450

Query: 290 ----ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PDV TY + I+  C  G++E AE ++ +M   G+  N+ TYN+LI GY   G +
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN----IDAAMGLYTEM---VIKSLVPD 398
            +A S    M + G +PN  +++ L+    K  +    +  ++ L+  +   V++ L+ +
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEE 570

Query: 399 VV---------VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           V+         V+   I  LSK   ++E       M  A +TPS    + +I   ++   
Sbjct: 571 VIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKL 630

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +  AL F      +       P    Y  II ALC +G    A  +F D+ S     D  
Sbjct: 631 LKEALRFLDSMVKRNY----LPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEI 686

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            +  ++ GLL+     D   LL+ M +    P + I
Sbjct: 687 AWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAI 722



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 167/340 (49%), Gaps = 5/340 (1%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N+ T+  L++  C  G+L AA      + + G+ P+   Y   + G+C+ G    A  L 
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M +   +   FTY  L++GLCG G +  A  +   M+ +G   +   Y+ ++ G C  
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G   +A+++ +    KG  PNV  +++LIDG C  G+++ A+ ++  M  K  +P+V  +
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           T LI G  K G ++  + LY  M+EA + P+V T ++LI G    G + +A         
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL----H 308

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
             +    +PN      +I ALC  G+I +A +    +    ++ +   YT+M+  L ++ 
Sbjct: 309 SMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSG 368

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGY-QENGDLKS 561
           +      L+  +I  G VPDA +   ++ G  +EN  L++
Sbjct: 369 KFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 183/444 (41%), Gaps = 54/444 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++TLI      GH+E A  +   +E   + P    C  L++ L K G+ +   +F 
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +V  G+  + V Y  +ID  C  G    A NL  ++I +G  P   +Y+ LI GLC E
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           NK++EA S+   M E GV  N   +  L+D + +    +        M    ++P+VVT+
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS------- 280
            V +   C+ G +  A +  + M   GV PN+  YN LI G+   G + +A S       
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522

Query: 281 --------------------------------------------LCSEMEKFEISPDVFT 296
                                                       L  E+ K + S   + 
Sbjct: 523 NGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYV 582

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y+  I+ L  V +LE A+  L  M    +  +   Y  +I+   +   +++AL     M 
Sbjct: 583 YDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++   P + ++  +I   C+ G+   A  ++ +++ K    D + +  LIDGL + GN  
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702

Query: 417 ETLRLYKEMLEAKITPSVFTVSSL 440
           +  RL   M E    P     S L
Sbjct: 703 DCSRLLSFMEEQNCRPGSAIYSRL 726



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 184/438 (42%), Gaps = 60/438 (13%)

Query: 38  VFNALNSLEIPKFNPSVFSTLII--AFSEMGHIEEALW-----VYRKIEVLPAIQACNAL 90
            F  L+S+E     P+ ++ L++  A  + G IEEA       V + I+V   I    ++
Sbjct: 303 AFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY--TSM 360

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++ L K GKFD      ++++  G V D   Y  LID  C +  +++A++L ++MI+ G+
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420

Query: 151 E-----------------------------------PTVVIYTILIHGLCNENKMVEAES 175
           +                                   P VV YT+ I   C + +M +AES
Sbjct: 421 QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAES 480

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD--- 232
           M   M + GV PNL TYN L+ GY  +  V++A      M+ +  +PN  ++ VL+    
Sbjct: 481 MMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLL 540

Query: 233 -------------GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
                         L K+ +++        + K       +VY+C I    K   L EA 
Sbjct: 541 KKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAK 600

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           S    M+   ++P    Y  +I+    +  L+ A   L  M K   L  + +Y  +I   
Sbjct: 601 SFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICAL 660

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C+EG    A S+   +  K    + + +  LIDG  + GN      L + M  ++  P  
Sbjct: 661 CEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGS 720

Query: 400 VVFTALIDGLSKDGNMKE 417
            +++ L   ++     +E
Sbjct: 721 AIYSRLTGEITVTSEAQE 738



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P +   ++L+    + G +     L   M +++L      +T LI+     G++    R 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
              +L A + P     +S + G  + G  ++A   FL    +     C+     YAA++Q
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG----CARTPFTYAALLQ 152

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G + +A  +F+ M  D   PD+  Y+ M+ GL  A R  + + LL D +  G VP
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212

Query: 542 DAVINQVMVRGYQENGDLKSAF 563
           +  +   ++ GY   GDL+ A 
Sbjct: 213 NVAVYNALIDGYCSTGDLELAI 234


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 230/487 (47%), Gaps = 23/487 (4%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +R  E  P+I   N LL    K+G+ D V    ++MV  G+  +  T+ VLI   C  G 
Sbjct: 12  FRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGC 71

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A  LFD+M +KG EP    + IL+ G C      +   +   MR  G  PN   YN 
Sbjct: 72  LDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNT 131

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  +CK    + A +   EM    L P+VVTF   +  LC  G++  A   F  M    
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 255 VF----PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
           V     PNI  YN ++ G CK G L EA +L  +M+  E   +  +YNI + GL  +G+L
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A+ +L++M   G+  NV +YN ++DG CK G +  A  +   MT  GV P+ VT+++L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G C  G +  A  +  EM+     P+      L+  L K+G + E   L ++M E   
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371

Query: 431 TPSVFTVSSLIHGLFKNGRISNAL------------------NFFLEKTDKTDG-GYCSP 471
                T + +I GL  NG++  A+                  N ++   D +D    C P
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMP 431

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + Y+ II  LC  G++ +A K F +M   NL+PD+  Y   +    +  ++     +L
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491

Query: 532 ADMIKMG 538
            DM K G
Sbjct: 492 KDMEKKG 498



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 251/558 (44%), Gaps = 37/558 (6%)

Query: 37  SVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALL 91
           S F +L     P+  PS++  + L+ + ++ G ++   W+ + +    V P     N L+
Sbjct: 5   SQFKSLR-FRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLI 63

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
             L   G  D   E +++M   G   +  ++G+L+   C  G   K L L  EM   G  
Sbjct: 64  GLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS 123

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           P  V+Y  LI   C E K  +AE +   MR+ G+ P++ T+NA +   C    V  A   
Sbjct: 124 PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI 183

Query: 212 YHEMLHHNL----QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           + +M    +    QPN++T+ +++ G CK G L  A   F  M       N   YN  + 
Sbjct: 184 FRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLL 243

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  + G L EA  +  EM    + P+V++YNI++ GLC  G L  A  L++ M   G+L 
Sbjct: 244 GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLP 303

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + VTY +L+ GYC  G + +A +V  +M   G  PN  T + L+    K G I  A  L 
Sbjct: 304 DTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL 363

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML--------------------- 426
            +M  K  V D V    +IDGL  +G + + + +   M                      
Sbjct: 364 QKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDS 423

Query: 427 --EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
               K  P + + S++I GL K GR+  A   F+E   K       P+  +Y   I + C
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN----LQPDSAIYDVFIHSFC 479

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            +G+I  A ++  DM          TY +++ GL    ++ ++  L+ +M + G+ PD  
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVS 539

Query: 545 INQVMVRGYQENGDLKSA 562
           I   ++    E G +K A
Sbjct: 540 IYNNVLSSLCEGGRVKDA 557



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 244/501 (48%), Gaps = 34/501 (6%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F  L+  +   G   + L +    R++   P     N L++   K+GK D   +  
Sbjct: 90  NEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLV 149

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGI---EPTVVIYTILIHG 163
           +EM   GL  DVVT+   I   C  G V++A  +F +M ID+ +   +P ++ Y +++ G
Sbjct: 150 DEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGG 209

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
            C E  + EA ++F  M+    + N  +YN  + G  ++  +  A     EM+   ++PN
Sbjct: 210 FCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPN 269

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V ++ ++MDGLCK G L  A      M   GV P+   Y  L+ G+C  G + EA ++  
Sbjct: 270 VYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLR 329

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM +   SP+ +T NIL+  L   G++  AE LLQKM ++G + + VT N +IDG C  G
Sbjct: 330 EMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNG 389

Query: 344 DMEKALSVCSQM-----------------------TEKGVEPNVVTFSSLIDGQCKAGNI 380
            ++KA+ + + M                       + K   P+++++S++I G CKAG +
Sbjct: 390 KLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRV 449

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A   + EM+ K+L PD  ++   I    K+G +    R+ K+M +     ++ T +SL
Sbjct: 450 GEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSL 509

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL    +I        E  ++      SP+  +Y  ++ +LC  G++  A  +  +M 
Sbjct: 510 IMGLGSKNQIFEIYGLIDEMRERG----VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565

Query: 501 SDNLRPDNCTYTTMLRGLLRA 521
              + P+  +++ +++   +A
Sbjct: 566 QKGISPNISSFSILIKAFCKA 586



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 229/473 (48%), Gaps = 31/473 (6%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           +  Y VL+  C  +G V     L  +M+  G+ P    + +LI  LC+   + +A  +F 
Sbjct: 21  IYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFD 80

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M E G  PN Y++  L+ GYC+    ++ LE   EM      PN V +  L+   CK G
Sbjct: 81  KMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG 140

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI----SPDV 294
           +   A      M K G+ P++  +N  I   C +G + EA  +  +M+  E+     P++
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI 200

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN+++ G C  G LE A  L +KM     L N  +YN  + G  + G + +A  V  +
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M + G+EPNV +++ ++DG CK G +  A  L   M    ++PD V +T L+ G    G 
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E   + +EM+    +P+ +T + L++ L+K GRIS A     +  +K   GY   + V
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK---GYV-IDTV 376

Query: 475 LYAAIIQALCYDGQILKASKLFSDM--------------------RSDNLR---PDNCTY 511
               +I  LC +G++ KA ++ + M                     SD+ +   PD  +Y
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           +T++ GL +A R+ +      +M+   + PD+ I  V +  + + G + SAFR
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 227/516 (43%), Gaps = 66/516 (12%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFD 101
           L +P+ N   ++ ++  F + G +EEA  ++ K++V   L   ++ N  L GL++ GK  
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                 +EMV  G+  +V +Y +++D  C  G +  A  L   M   G+ P  V YT L+
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM------------------------- 196
           HG C+  K+ EA ++ R M   G  PN YT N L+                         
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372

Query: 197 ----------DGYCKVADVNRALEFYHEMLHH------NL-----------------QPN 223
                     DG C    +++A+E  + M  H      NL                  P+
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPD 432

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++++  ++ GLCK G +  A   F+ M    + P+  +Y+  I   CK G +  A  +  
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLK 492

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +MEK   +  + TYN LI GL    Q+    GL+ +M + G+  +V  YN+++   C+ G
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGG 552

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A SV  +M +KG+ PN+ +FS LI   CKA +  A   ++ E+ +        +++
Sbjct: 553 RVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF-EIALNVCGHKEALYS 611

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
              + L   G + +   L++  L+       F    LI  L K+ ++ +A     +  DK
Sbjct: 612 LTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
             G +  P    +  +I  L   G   +A +L   M
Sbjct: 672 --GYWFDPAS--FMPVIDGLGKRGNKHEADELAEKM 703



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 184/411 (44%), Gaps = 49/411 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TL+  +   G + EA  V R++      P    CN LL  L K+G+     E  ++M
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G V D VT  ++ID  C  G + KA+ + + M   G      +    I GL +++  
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI-GLVDDSD- 424

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
                   S ++C  +P+L +Y+ ++ G CK   V  A + + EM+  NLQP+   + V 
Sbjct: 425 --------SRKKC--MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVF 474

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK G++ +A      M K G    +  YN LI G      +FE   L  EM +  +
Sbjct: 475 IHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGV 534

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM----- 345
           SPDV  YN ++  LC  G+++ A  +L +M ++GI  N+ +++ LI  +CK  D      
Sbjct: 535 SPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDE 594

Query: 346 --EKALSVCSQMT---------------------------EKGVEPNVVTFSSLIDGQCK 376
             E AL+VC                               ++  +     +  LID  CK
Sbjct: 595 IFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCK 654

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
              +D A G+  +++ K    D   F  +IDGL K GN  E   L ++M+E
Sbjct: 655 DEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 165/391 (42%), Gaps = 70/391 (17%)

Query: 40  NALNSLEIPKFNPSVFSTLIIAFS--EMGHIEEALWVYRKIE----VLPAIQACNALLNG 93
           N L  +     +P+ ++  I+ +S  + G I EA  + +K+     V+  +  CN +++G
Sbjct: 326 NVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV-TCNIVIDG 384

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVA-----------------------DVVTYGVLIDCCC 130
           L   GK D   E    M   G  A                       D+++Y  +I   C
Sbjct: 385 LCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLC 444

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
             G V +A   F EM+ K ++P   IY + IH  C E K+  A  + + M + G    L 
Sbjct: 445 KAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQ 504

Query: 191 TYNALMDGYCKVADVNRALEFY---HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           TYN+L+ G   +   N+  E Y    EM    + P+V  +  ++  LC+ G ++ A +  
Sbjct: 505 TYNSLIMG---LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVL 561

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKA------GNLFE-AMSLCSEMEK------------- 287
             M + G+ PNI  ++ LI   CKA        +FE A+++C   E              
Sbjct: 562 DEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGG 621

Query: 288 --------FEISPDV------FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
                   FE + D       F Y  LI  LC   +L+ A G+L K+  +G   +  ++ 
Sbjct: 622 EVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFM 681

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
            +IDG  K G+  +A  +  +M E   E  V
Sbjct: 682 PVIDGLGKRGNKHEADELAEKMMEMASEGKV 712



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P + ++  L+   +K+G +     L K+M+ + ++P  +T + LI  L  +G + +A   
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F    DK     C PN   +  +++  C  G   K  +L  +MR     P+   Y T++ 
Sbjct: 79  F----DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLIS 134

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              +  +  D   L+ +M K G+ PD V     +     +G +  A R
Sbjct: 135 SFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASR 182


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 225/463 (48%), Gaps = 5/463 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ GL  +G+ +      E     G V   V Y VLID  C +GD+ + L L  EM  KG
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKG 146

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I PTVV Y  +IH L  +  + + ES+   MR  G+ PN+  YN +++  CK    ++A 
Sbjct: 147 IIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQAS 206

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +  ++M+     P+VVTF  ++ G C+ G++R A        + G+ PN   Y  LI G 
Sbjct: 207 DMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G    A  L  EM     +PD+ T   LI GL   GQ+  A  + +KM +  ++ + 
Sbjct: 267 CVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDA 326

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             YN LI G CK+  +  A ++  +M E+ V+P+   +++LIDG  ++  +  A  ++ E
Sbjct: 327 NIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-E 385

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
            + +   PD+V +  +I G  K G MKE +     M +A   P  FT ++L+ G  K G 
Sbjct: 386 FMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGD 445

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           IS +L    +   +     C PN   YA++I   C  G    A  LF+ M+S+ L P+  
Sbjct: 446 ISASLRLLCDMMKRR----CKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVV 501

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            YT ++  L +  +++        M+     P+      +V G
Sbjct: 502 HYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 231/471 (49%), Gaps = 16/471 (3%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           ++  +E  L   R   + P +Q  N ++N L K        +   +MV      DVVT+ 
Sbjct: 166 DLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFN 225

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
            +I   C +GDV +AL L  E I +G+EP  + YT LIHG C   + + A  +   M   
Sbjct: 226 TMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGR 285

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G  P++ T  AL+ G      VN AL    +M    + P+   + VL+ GLCK   L AA
Sbjct: 286 GHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAA 345

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            N    M +  V P+ F+Y  LIDG  ++  L +A  +   ME+ +  PD+  YN++IKG
Sbjct: 346 KNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE-KACPDIVAYNVMIKG 404

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C  G ++ A   +  M K G + +  TY +L+DGY K+GD+  +L +   M ++  +PN
Sbjct: 405 YCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPN 464

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           + T++SLI G C  G+  +A  L+ +M  + L P+VV +T LI  L K   + +    ++
Sbjct: 465 IFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFE 524

Query: 424 EMLEAKITPSVFTVSSLIHGLF--KNGRISNALNFFLEKTDK-----------TDGGYCS 470
            ML     P+  TV  L++GL   ++G +++  +   +  +K           +DG    
Sbjct: 525 HMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDG--LD 582

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           P    Y AII +LC    + KA  L   M +    PD  T+ ++L G   A
Sbjct: 583 PRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSA 633



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 212/426 (49%), Gaps = 5/426 (1%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A  L+ EM+ +          +++ GLC E ++ E   +  +    G VP    YN L+
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           DGYC+  D+ R L    EM    + P VVT+G ++  L + G+L    +    M   G+ 
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN+ +YN +I+  CK  +  +A  + ++M K   +PDV T+N +I G C  G +  A  L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L++  + G+  N ++Y  LI G+C  G+   A  +  +M  +G  P+++T  +LI G   
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +G ++ A+ +  +M  + ++PD  ++  LI GL K   +     L +EMLE K+ P  F 
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++LI G  ++ ++S+A   F    +K       P+ V Y  +I+  C  G + +A    
Sbjct: 364 YTTLIDGFVRSDKLSDARKIFEFMEEKA-----CPDIVAYNVMIKGYCKFGMMKEAVTCM 418

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
           S MR     PD  TYTT++ G  +   +   + LL DM+K    P+      ++ GY   
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNI 478

Query: 557 GDLKSA 562
           GD  SA
Sbjct: 479 GDTYSA 484



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 202/432 (46%), Gaps = 27/432 (6%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGL 94
           + LN +   +FNP V  F+T+I  F   G + EAL + R   +  + P   +   L++G 
Sbjct: 207 DMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
             +G+     +   EM+  G   D++T G LI      G V  AL + ++M ++ + P  
Sbjct: 267 CVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDA 326

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC---KVADVNRALEF 211
            IY +LI GLC +  +  A+++   M E  V P+ + Y  L+DG+    K++D  +  EF
Sbjct: 327 NIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEF 386

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             E       P++V + V++ G CK G ++ A      M K G  P+ F Y  L+DG+ K
Sbjct: 387 MEE----KACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G++  ++ L  +M K    P++FTY  LI G C +G    AE L  KM  EG+  NVV 
Sbjct: 443 KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVH 502

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG--QCKAGNID-------- 381
           Y  LI    K+  + +A +    M      PN  T   L++G   C+ G ++        
Sbjct: 503 YTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQ 562

Query: 382 -----AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
                A + ++  ++   L P +  + A+I  L +   + + + L  +M      P   T
Sbjct: 563 AHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPIT 622

Query: 437 VSSLIHGLFKNG 448
             SL++G    G
Sbjct: 623 FLSLLYGFSSAG 634



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 5/375 (1%)

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           Y+   ++ G C    V                P  V + VL+DG C+ G++         
Sbjct: 82  YSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGE 141

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+ P +  Y  +I    + G+L +  SL  EM    +SP+V  YN +I  LC    
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A  +L +M K     +VVT+N++I G+C+EGD+ +AL +  +   +G+EPN ++++ 
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI G C  G    A  L  EM+ +   PD++   ALI GL   G + + L + ++M E +
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           + P     + LI GL K   +S A N   E  ++       P+  +Y  +I       ++
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK----VQPDKFIYTTLIDGFVRSDKL 377

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
             A K+F  M  +   PD   Y  M++G  +   M + +  ++ M K G +PD      +
Sbjct: 378 SDARKIFEFM-EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTL 436

Query: 550 VRGYQENGDLKSAFR 564
           V GY + GD+ ++ R
Sbjct: 437 VDGYAKKGDISASLR 451



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 5/389 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G +P+    N L+    +     RA   Y EML      +  +  V++ GLC  G +   
Sbjct: 41  GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG 100

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                     G  P    YN LIDG+C+ G++   + L  EME   I P V TY  +I  
Sbjct: 101 RGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHW 160

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           L   G L   E LL +M   G+  NV  YN++I+  CK     +A  + +QM +    P+
Sbjct: 161 LGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPD 220

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           VVTF+++I G C+ G++  A+ L  E + + L P+ + +T LI G    G       L  
Sbjct: 221 VVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLV 280

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
           EM+    TP + T+ +LIHGL  +G++++AL    EK  +       P+  +Y  +I  L
Sbjct: 281 EMMGRGHTPDMITLGALIHGLVVSGQVNDAL-IVREKMAERQ---VMPDANIYNVLISGL 336

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C    +  A  L  +M    ++PD   YTT++ G +R+ ++ D   +  + ++    PD 
Sbjct: 337 CKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDI 395

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKES 572
           V   VM++GY + G +K A  C   ++++
Sbjct: 396 VAYNVMIKGYCKFGMMKEAVTCMSSMRKA 424



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 4/321 (1%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G  P+    NCL+    +      A  L  EM   E   D ++  ++++GLC  G++E  
Sbjct: 41  GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG 100

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
            GL++  + EG +   V YN LIDGYC+ GD+ + L +  +M  KG+ P VVT+ ++I  
Sbjct: 101 RGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHW 160

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             + G++     L  EM  + L P+V ++  +I+ L K  +  +   +  +M++++  P 
Sbjct: 161 LGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPD 220

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T +++I G  + G +  AL    E   +       PN + Y  +I   C  G+ + AS
Sbjct: 221 VVTFNTMIAGFCREGDVREALKLLREAIRRG----LEPNQLSYTPLIHGFCVRGEAMVAS 276

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M      PD  T   ++ GL+ + ++ D +++   M +  ++PDA I  V++ G 
Sbjct: 277 DLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGL 336

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            +   L +A    E + E ++
Sbjct: 337 CKKRMLSAAKNLLEEMLEQKV 357



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 162/392 (41%), Gaps = 57/392 (14%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
               LI      G + +AL V  K+   +V+P     N L++GL KK    +     EEM
Sbjct: 293 TLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEM 352

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +  D   Y  LID       +  A  +F+ M +K   P +V Y ++I G C    M
Sbjct: 353 LEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMM 411

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA +   SMR+ G +P+ +TY  L+DGY K  D++ +L    +M+    +PN+ T+  L
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASL 471

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI------DGHCKAGNLFEAMSL--- 281
           + G C +G+  +A + F  M   G+FPN+  Y  LI      D   +A   FE M L   
Sbjct: 472 ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHC 531

Query: 282 ----------------CSE-------------------MEKFE------ISPDVFTYNIL 300
                           C                     ++ F       + P +  YN +
Sbjct: 532 PPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAI 591

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC    L  A  L  KM  +G L + +T+ SL+ G+   G+  K  S      ++  
Sbjct: 592 IFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDE 651

Query: 361 EPNVVTFSSLIDGQCKA---GNIDAAMGLYTE 389
              +  + +L +    +   G +   + LY+E
Sbjct: 652 FEIITKYMALFNQHVTSSVVGEVSRILQLYSE 683



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 18/177 (10%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   +++LI  +  +G    A  ++ K++   + P +     L+  L KK K      
Sbjct: 462 KPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAA 521

Query: 106 FYEEMVL--CGLVADVVTYGV--LIDCCCG-----QGDVMKA------LNLFDEMIDKGI 150
           ++E M+L  C      V Y V  L++C  G     + D  +A      L++F  +I  G+
Sbjct: 522 YFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGL 581

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +P +  Y  +I  LC  N + +A  +   M   G +P+  T+ +L+ G+    +  +
Sbjct: 582 DPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGK 638


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 213/417 (51%), Gaps = 5/417 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIK--KGKFDSVWEFYE 108
           VF  LI A+ + G   +A+  +R   K +    I+ C  LL  +++    + +  W  Y 
Sbjct: 178 VFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYL 237

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E++  G    +  + VL+   C  GDV  A  +FDE+  +G+ PTVV +  LI G C   
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + E   +   M   GV P+++T++AL++G CK   ++     + EM    L PN VTF 
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+DG CK G++  A   F  M   GV P++  YN LI+G CK G+L EA  L +EM   
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + PD  T+  LI G C  G +E A  + ++M +EGI  + V + +LI G C+EG +  A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             + + M   G +P+  T++ +ID  CK G++     L  EM     VP VV + AL++G
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           L K G MK    L   ML   + P+  T + L+ G  K+G   +   F  EK   TD
Sbjct: 538 LCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLVTD 594



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 192/357 (53%), Gaps = 4/357 (1%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  ++ R+   Y E+L     P +  F VLM G CK G++  A   F  + K G+ P + 
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVV 284

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LI G CK+G++ E   L   ME   + PDVFT++ LI GLC  G+L+    L  +M
Sbjct: 285 SFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 344

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G++ N VT+ +LIDG CK G ++ AL     M  +GV P++VT+++LI+G CK G++
Sbjct: 345 CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 404

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L  EM    L PD + FT LIDG  KDG+M+  L + + M+E  I       ++L
Sbjct: 405 KEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTAL 464

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL + GR+ +A       TD    G+  P+   Y  +I   C  G +    KL  +M+
Sbjct: 465 ISGLCREGRVHDAGRML---TDMLSAGF-KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQ 520

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           SD   P   TY  ++ GL +  +M +  MLL  M+ +G+ P+ +   +++ G+ ++G
Sbjct: 521 SDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 195/356 (54%), Gaps = 4/356 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            + +++  + + G  P +Y +N LM G+CK  DV  A   + E+    L+P VV+F  L+
Sbjct: 231 RSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLI 290

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G CK G++         M   GV P++F ++ LI+G CK G L E   L  EM    + 
Sbjct: 291 SGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLV 350

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  T+  LI G C  G+++ A    Q M  +G+  ++VTYN+LI+G CK GD+++A  +
Sbjct: 351 PNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL 410

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            ++MT  G++P+ +TF++LIDG CK G++++A+ +   MV + +  D V FTALI GL +
Sbjct: 411 VNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCR 470

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G + +  R+  +ML A   P   T + +I    K G +   + F L K  ++DG    P
Sbjct: 471 EGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVK--MGFKLLKEMQSDGHV--P 526

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             V Y A++  LC  GQ+  A  L   M +  + P++ TY  +L G  +    +DV
Sbjct: 527 GVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 12/291 (4%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P ++ +N+L+ G C  G +  A  +  ++ K G+   VV++N+LI G CK GD+E+   +
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  +GV P+V TFS+LI+G CK G +D    L+ EM  + LVP+ V FT LIDG  K
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +   L+ ++ ML   + P + T ++LI+GL K G +  A     E T         P
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT----ASGLKP 421

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + +  +I   C DG +  A ++   M  + +  D+  +T ++ GL R  R+ D   +L
Sbjct: 422 DKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
            DM+  G  PD     +++  + + GD+K  F+    LKE      +++GH
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFK---LLKE-----MQSDGH 524



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 4/256 (1%)

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++E +  L  ++   G    +  +N L+ G+CK GD+  A  V  ++ ++G+ P VV+F+
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LI G CK+G+++    L   M  + + PDV  F+ALI+GL K+G + E   L+ EM   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P+  T ++LI G  K G++  AL  F     +       P+ V Y A+I  LC  G 
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG----VRPDLVTYNALINGLCKVGD 403

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A +L ++M +  L+PD  T+TT++ G  +   M   + +   M++ GI  D V    
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTA 463

Query: 549 MVRGYQENGDLKSAFR 564
           ++ G    G +  A R
Sbjct: 464 LISGLCREGRVHDAGR 479



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 4/231 (1%)

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++E++ ++  ++ + G  P +  F+ L+ G CKAG++  A  ++ E+  + L P VV F 
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI G  K G+++E  RL   M    + P VFT S+LI+GL K GR+      F    D+
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF----DE 343

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
             G    PN V +  +I   C  G++  A K F  M +  +RPD  TY  ++ GL +   
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + +   L+ +M   G+ PD +    ++ G  ++GD++SA      + E  I
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGI 454


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 215/458 (46%), Gaps = 36/458 (7%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C    V  A  + DEM  KG  P  V Y  ++  LC  +++ EA  +  +M      P  
Sbjct: 147 CQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVA 201

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +YNA++   C+   +        +M+   LQPNV+T+  ++D  CK GELR A      
Sbjct: 202 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 261

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G  PN+  +  L+ G    G + +A+ +   M     +P   +YNILI+GLC VG 
Sbjct: 262 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 321

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L+GA  +L  M + G   NV TY++LIDG+ K GD+  A+S+ + M+  G +PNVV +++
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           ++D  CK    + A  L  +M++++  P+ V F  LI  L     +   L ++ EM    
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKT-----------DKTDGGYCS-------- 470
             P+  T + LIHGLF+ G   +AL+   E             +    G C         
Sbjct: 442 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 501

Query: 471 ------------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
                       PN   ++AII A C +G++  A+ +   M   N   +   YT ++  L
Sbjct: 502 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 561

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
               +++D M  L  M+  GI P+ V   V+VRG   N
Sbjct: 562 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 599



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 226/468 (48%), Gaps = 43/468 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC-NALLNGLIKKGKFDSVWEFYEEMVL 112
            ++T++    ++  ++EA  V   +  +P + A  NA++  L ++ +   V+    +MV 
Sbjct: 173 TYATIVSVLCKLDRLDEATEV---LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVG 229

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
            GL  +V+TY  ++D  C  G++  A  +   M+  G  P VV +T L+ GL ++ ++ +
Sbjct: 230 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 289

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  M+R M   G  P+  +YN L+ G C V D+  A    + M  H   PNV T+  L+D
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 349

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G  K G+L  A + +  M++ G  PN+ VY  ++D  CK     +A SL  +M      P
Sbjct: 350 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 409

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +  T+N LI+ LC   ++  A G+  +M + G + N  TYN LI G  +EG+   AL + 
Sbjct: 410 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 469

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           ++M   G+E ++VT+++++ G C+      AM    +M+++ + P+   F+A+I    K+
Sbjct: 470 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 529

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G     +R+   ML A                       N +N             C  N
Sbjct: 530 GE----VRMAAWMLGAM----------------------NVVN-------------CHRN 550

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            ++Y  ++  LC   +++ A      M  + + P+  T+  ++RG+ R
Sbjct: 551 ILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 598



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 38  VFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLN 92
           VF+ ++ +      P+V  ++T++ AF + G +  A  +  ++ +    P +    AL+ 
Sbjct: 220 VFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVR 279

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL   G+     + +  MV  G     V+Y +LI   C  GD+  A ++ + M   G  P
Sbjct: 280 GLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFP 339

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
            V  Y+ LI G      +  A S++  M   G  PN+  Y  ++D +CK    N+A    
Sbjct: 340 NVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLI 399

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            +ML  N  PN VTF  L+  LC    +  A   F  M + G  PN   YN LI G  + 
Sbjct: 400 DKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 459

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           GN  +A+ + +EM+   I   + TYN ++ GLC       A   + KM  +GI  N  T+
Sbjct: 460 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 519

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           +++I  YCKEG++  A  +   M       N++ ++ L+   C    +  AM    +M+ 
Sbjct: 520 SAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLY 579

Query: 393 KSLVPDVVVFTALIDGLSKD 412
           + + P+ V +  L+ G+ ++
Sbjct: 580 EGIYPNTVTWNVLVRGVFRN 599



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 20/273 (7%)

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV--------- 351
           ++ L   G ++G +  LQ+M   G+        + +  + + G  ++AL           
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 352 CSQMTEKGV--EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           C++         P+    +      C+   + AA  +  EM  K   PD V +  ++  L
Sbjct: 122 CARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL 181

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   + E      E+L A + P   + ++++  L +  R+    +     +D    G  
Sbjct: 182 CKLDRLDEA----TEVL-AAMPPVAASYNAIVLALCREFRMQEVFSVV---SDMVGRGL- 232

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            PN + Y  I+ A C  G++  A  + + M      P+  T+T ++RGL    R+ D + 
Sbjct: 233 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 292

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +   M+  G  P  V   +++RG    GDLK A
Sbjct: 293 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 325


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 232/446 (52%), Gaps = 20/446 (4%)

Query: 47  IPKFNP----SVFSTLIIAFSEMGHIEEA----LWVYRKIEVLPAIQACNALLNGLIKKG 98
           +P  +P     + S L  A+++ G + +A    L   R+   LPA   C+ L++ L    
Sbjct: 110 LPAASPGDPAPLVSELAAAYADEGLLPDACSLVLLALRRGISLPA-PVCSGLMSRLPSTP 168

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +    + FY +++  G+  +   + VL+      G+++ A  +FDEM  + ++PTVV + 
Sbjct: 169 E---AYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFN 224

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            LI G+C    +   + +++ M + GV P++YTY AL+ G+C+   +  A++ ++EM   
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT 284

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            + PN V F  L+D  CK G + A  + +  M   GV P++  YN L++G C+A NL  A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            S+  EM+   + PD  TY  LI G C  G+L+ A  + QKM ++ +  + VTY +LI G
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             K G    A  V  +M E  +EP+  T++ +ID  C+ G++     L  EM  K   P 
Sbjct: 405 LSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPG 464

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           VV +  +++GL K G MK    L   ML   ++P   T + L+ G  K+G+++N+     
Sbjct: 465 VVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS----- 519

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALC 484
           E+ + + G    P+  +Y ++I  L 
Sbjct: 520 EELESSKG--MVPDFAVYTSLISELA 543



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 195/360 (54%), Gaps = 5/360 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +F+ L+  F  +G +  A  V+ ++   V P +   N L++G+ +    D+V   Y+EM 
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMS 247

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  DV TYG LI   C  G +  A+ +F+EM D G+ P  V++T LI   C E  + 
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVN 307

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
               +++ MR  GV+P+L  YNAL++G C+  ++  A     EM +  L+P+ VT+  L+
Sbjct: 308 AGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLI 367

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG CK G+L  A +    MA+  V  +   Y  LI G  KAG   +A  +  EM +  + 
Sbjct: 368 DGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALE 427

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY ++I   C  G ++    LL++M  +G    VVTYN +++G CK G M+ A  +
Sbjct: 428 PDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADML 487

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   GV P+ +T++ L+DGQCK G +  +  L +    K +VPD  V+T+LI  L+K
Sbjct: 488 LHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAK 544



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           ++     A  FY ++L   + P    F VLM    ++GEL +A   F  M +  V P + 
Sbjct: 163 RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVV 221

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LI G C+A +L     L  EM    + PDV+TY  LIKG C  G++E A  +  +M
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G+  N V + +LID +CKEG++   + +   M  +GV P++V +++L++G C+A N+
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            AA  +  EM    L PD V +T LIDG  KDG +   + + ++M E +++    T ++L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL K GR  +A     E  +        P++  Y  +I A C  G +    KL  +M+
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAA----LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           +   +P   TY  ++ GL +  +M +  MLL  M+ +G+ PD +   +++ G  ++G + 
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVA 517

Query: 561 SAFRCSEFLKESR 573
           +    SE L+ S+
Sbjct: 518 N----SEELESSK 526



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 5/225 (2%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           Q+ + G+ P    F+ L+    + G + +A  ++ EM  +S+ P VV F  LI G+ +  
Sbjct: 176 QLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRAR 234

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++     LYKEM +  + P V+T  +LI G  + GR+ NA+  F E  D       +PN 
Sbjct: 235 DLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG----VNPNA 290

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V++  +I A C +G +     L+ DMR   + PD   Y  ++ GL RA+ +     ++ +
Sbjct: 291 VVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEE 350

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           M   G+ PD V    ++ G  ++G L  A    + + E  +   E
Sbjct: 351 MKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 256/552 (46%), Gaps = 42/552 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+T I AF + G +EEA+ ++ K+E   V P +   N +++GL   G++D  + F E+M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+   ++TY +L+        +  A  +  EM  KG  P V++Y  LI        +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVA-----------------DVNR------ 207
            +A  +   M   G+     TYN L+ GYCK                   +VN+      
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441

Query: 208 ------------ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                       AL F  EML  N+ P       L+ GLCK G+   A   +      G 
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +    N L+ G C+AG L EA  +  E+       D  +YN LI G CG  +L+ A  
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L +M K G+  +  TY+ LI G      +E+A+         G+ P+V T+S +IDG C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA   +     + EM+ K++ P+ VV+  LI    + G +   L L ++M    I+P+  
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SLI G+    R+  A   F E   + +G    PN   Y A+I      GQ++K   L
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEM--RMEG--LEPNVFHYTALIDGYGKLGQMVKVECL 737

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S N+ P+  TYT M+ G  R   + +   LL +M + GIVPD++  +  + GY +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797

Query: 556 NGDLKSAFRCSE 567
            G +  AF+ S+
Sbjct: 798 QGGVLEAFKGSD 809



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 257/551 (46%), Gaps = 47/551 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC--CGQGDVMK 137
           V P +      +N   K GK +   + + +M   G+  +VVT+  +ID    CG+ D  +
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD--E 313

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A    ++M+++G+EPT++ Y+IL+ GL    ++ +A  + + M + G  PN+  YN L+D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-- 255
            + +   +N+A+E    M+   L     T+  L+ G CK G+   A      M   G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 256 ----FPNIFVYNC-----------------------------LIDGHCKAGNLFEAMSLC 282
               F ++    C                             LI G CK G   +A+ L 
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +        D  T N L+ GLC  G+L+ A  + +++   G + + V+YN+LI G C +
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A     +M ++G++P+  T+S LI G      ++ A+  + +     ++PDV  +
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + +IDG  K    +E    + EM+   + P+    + LI    ++GR+S AL     + D
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL---RED 670

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
               G  SPN   Y ++I+ +    ++ +A  LF +MR + L P+   YT ++ G  +  
Sbjct: 671 MKHKG-ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
           +M+ V  LL +M    + P+ +   VM+ GY  +G++  A   S  L E R      +  
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA---SRLLNEMREKGIVPDSI 786

Query: 583 TTRSFL-GHLK 592
           T + F+ G+LK
Sbjct: 787 TYKEFIYGYLK 797



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 229/512 (44%), Gaps = 67/512 (13%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+     T  +L+       +  K    FD ++ KG+ P V ++T  I+  C   K+ EA
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 279

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M E GV PN+ T+N ++DG       + A  F  +M+   ++P ++T+ +L+ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L +   +  A      M K G  PN+ VYN LID   +AG+L +A+ +   M    +S  
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS------------------- 334
             TYN LIKG C  GQ + AE LL++M   G   N  ++ S                   
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459

Query: 335 ----------------LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                           LI G CK G   KAL +  Q   KG   +  T ++L+ G C+AG
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  +  E++ +  V D V +  LI G      + E      EM++  + P  +T S
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579

Query: 439 SLIHGLFKNGRISNALNFFLE---------------------KTDKTDGGY--------- 468
            LI GLF   ++  A+ F+ +                     K ++T+ G          
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639

Query: 469 -CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V+Y  +I+A C  G++  A +L  DM+   + P++ TYT++++G+    R+ + 
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +L  +M   G+ P+      ++ GY + G +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 210/449 (46%), Gaps = 11/449 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N  V++ LI +F E G + +A     L V + + +  +    N L+ G  K G+ D+   
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY--NTLIKGYCKNGQADNAER 421

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             +EM+  G   +  ++  +I   C       AL    EM+ + + P   + T LI GLC
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              K  +A  ++      G V +  T NAL+ G C+   ++ A     E+L      + V
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+ G C   +L  A  F   M K G+ P+ + Y+ LI G      + EA+    + 
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  + PDV+TY+++I G C   + E  +    +M  + +  N V YN LI  YC+ G +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             AL +   M  KG+ PN  T++SLI G      ++ A  L+ EM ++ L P+V  +TAL
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           IDG  K G M +   L +EM    + P+  T + +I G  ++G ++ A     E  +K  
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG- 780

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASK 494
                P+ + Y   I      G +L+A K
Sbjct: 781 ---IVPDSITYKEFIYGYLKQGGVLEAFK 806


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 256/552 (46%), Gaps = 42/552 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+T I AF + G +EEA+ ++ K+E   V P +   N +++GL   G++D  + F E+M
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+   ++TY +L+        +  A  +  EM  KG  P V++Y  LI        +
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 370

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVA-----------------DVNR------ 207
            +A  +   M   G+     TYN L+ GYCK                   +VN+      
Sbjct: 371 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 430

Query: 208 ------------ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                       AL F  EML  N+ P       L+ GLCK G+   A   +      G 
Sbjct: 431 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 490

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
             +    N L+ G C+AG L EA  +  E+       D  +YN LI G CG  +L+ A  
Sbjct: 491 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 550

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L +M K G+  +  TY+ LI G      +E+A+         G+ P+V T+S +IDG C
Sbjct: 551 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 610

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KA   +     + EM+ K++ P+ VV+  LI    + G +   L L ++M    I+P+  
Sbjct: 611 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T +SLI G+    R+  A   F E   + +G    PN   Y A+I      GQ++K   L
Sbjct: 671 TYTSLIKGMSIISRVEEAKLLFEEM--RMEG--LEPNVFHYTALIDGYGKLGQMVKVECL 726

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +M S N+ P+  TYT M+ G  R   + +   LL +M + GIVPD++  +  + GY +
Sbjct: 727 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786

Query: 556 NGDLKSAFRCSE 567
            G +  AF+ S+
Sbjct: 787 QGGVLEAFKGSD 798



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 257/551 (46%), Gaps = 47/551 (8%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC--CGQGDVMK 137
           V P +      +N   K GK +   + + +M   G+  +VVT+  +ID    CG+ D  +
Sbjct: 245 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD--E 302

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A    ++M+++G+EPT++ Y+IL+ GL    ++ +A  + + M + G  PN+  YN L+D
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-- 255
            + +   +N+A+E    M+   L     T+  L+ G CK G+   A      M   G   
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 256 ----FPNIFVYNC-----------------------------LIDGHCKAGNLFEAMSLC 282
               F ++    C                             LI G CK G   +A+ L 
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +        D  T N L+ GLC  G+L+ A  + +++   G + + V+YN+LI G C +
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
             +++A     +M ++G++P+  T+S LI G      ++ A+  + +     ++PDV  +
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
           + +IDG  K    +E    + EM+   + P+    + LI    ++GR+S AL     + D
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL---RED 659

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
               G  SPN   Y ++I+ +    ++ +A  LF +MR + L P+   YT ++ G  +  
Sbjct: 660 MKHKGI-SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
           +M+ V  LL +M    + P+ +   VM+ GY  +G++  A   S  L E R      +  
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA---SRLLNEMREKGIVPDSI 775

Query: 583 TTRSFL-GHLK 592
           T + F+ G+LK
Sbjct: 776 TYKEFIYGYLK 786



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 229/512 (44%), Gaps = 67/512 (13%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+     T  +L+       +  K    FD ++ KG+ P V ++T  I+  C   K+ EA
Sbjct: 210 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 268

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +F  M E GV PN+ T+N ++DG       + A  F  +M+   ++P ++T+ +L+ G
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L +   +  A      M K G  PN+ VYN LID   +AG+L +A+ +   M    +S  
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS------------------- 334
             TYN LIKG C  GQ + AE LL++M   G   N  ++ S                   
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448

Query: 335 ----------------LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                           LI G CK G   KAL +  Q   KG   +  T ++L+ G C+AG
Sbjct: 449 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 508

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D A  +  E++ +  V D V +  LI G      + E      EM++  + P  +T S
Sbjct: 509 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 568

Query: 439 SLIHGLFKNGRISNALNFFLE---------------------KTDKTDGGY--------- 468
            LI GLF   ++  A+ F+ +                     K ++T+ G          
Sbjct: 569 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 628

Query: 469 -CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              PN V+Y  +I+A C  G++  A +L  DM+   + P++ TYT++++G+    R+ + 
Sbjct: 629 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 688

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +L  +M   G+ P+      ++ GY + G +
Sbjct: 689 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 720



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 214/464 (46%), Gaps = 12/464 (2%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNAL 90
           Y V   +     P  N  V++ LI +F E G + +A     L V + + +  +    N L
Sbjct: 339 YFVLKEMTKKGFPP-NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY--NTL 395

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  K G+ D+     +EM+  G   +  ++  +I   C       AL    EM+ + +
Sbjct: 396 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 455

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P   + T LI GLC   K  +A  ++      G V +  T NAL+ G C+   ++ A  
Sbjct: 456 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 515

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              E+L      + V++  L+ G C   +L  A  F   M K G+ P+ + Y+ LI G  
Sbjct: 516 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 575

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
               + EA+    + ++  + PDV+TY+++I G C   + E  +    +M  + +  N V
Sbjct: 576 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 635

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            YN LI  YC+ G +  AL +   M  KG+ PN  T++SLI G      ++ A  L+ EM
Sbjct: 636 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 695

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            ++ L P+V  +TALIDG  K G M +   L +EM    + P+  T + +I G  ++G +
Sbjct: 696 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 755

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           + A     E  +K       P+ + Y   I      G +L+A K
Sbjct: 756 TEASRLLNEMREKG----IVPDSITYKEFIYGYLKQGGVLEAFK 795


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 248/525 (47%), Gaps = 11/525 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +  L+ A    G I +AL V   +      P     +  L    +   F       
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCN 166
            ++   G   DV    +++   C QG V +A+ L  +++   G EP VV Y  ++ GLC 
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             +    + +   M   G  PN+ T++ L+   C+     R  E + +M  H   P+V  
Sbjct: 230 ARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRM 289

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++DG+CK   L  A      M  +G+ PN+  YN L+ G C A    EA  L +EM 
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
             +   D  T+NIL+  LC  G ++    +L++M + G + +V+TY ++I+G+CKEG ++
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A+ +   M   G  PN V+++ ++ G C A     A  L ++M+ +   P+ V F  LI
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           + L K G +++ + L K+ML    +P + + S++I GL K G    AL        K   
Sbjct: 470 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG-- 527

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              SPN ++Y++I  AL  +G+I K  ++F +++   +R D   Y  ++  L +      
Sbjct: 528 --MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDR 585

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +  LA M+  G VP+     +++RG    G +K A    E L E
Sbjct: 586 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA---QEILTE 627



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 225/445 (50%), Gaps = 8/445 (1%)

Query: 61  AFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
           A  + G ++EA+ + R +       P + + NA+L GL    ++  V +  EEMV  G  
Sbjct: 190 AVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCP 249

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            ++VT+  LI   C  G   +   +  +M + G  P V +Y  +I G+C E ++  A  +
Sbjct: 250 PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
              M   G+ PN+  YN L+ G C       A     EM   +   + VTF +L+D LC+
Sbjct: 310 LNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQ 369

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +         M + G  P++  Y  +I+G CK G + EA+ L   M      P+  +
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y I++KGLC   +   AE L+ +M ++G   N VT+N+LI+  CK+G +E+A+ +  QM 
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
             G  P+++++S++IDG  KAGN D A+ L   MV K + P+ ++++++   LS +G + 
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           + +++++ + +  +       +++I  L K G    A+ F            C PN   Y
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG----CVPNESTY 605

Query: 477 AAIIQALCYDGQILKASKLFSDMRS 501
             +I+ L  +G + +A ++ +++ S
Sbjct: 606 TILIRGLASEGFVKEAQEILTELCS 630



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 228/490 (46%), Gaps = 8/490 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA++ G  + G+  +       +    +  +  TY  L+   C +G +  AL + D+M  
Sbjct: 83  NAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMAR 139

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G  PT  +Y + +   C  +    A  + R +   G   ++   N ++   C    V+ 
Sbjct: 140 RGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDE 199

Query: 208 ALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           A+    ++L     +P+VV++  ++ GLC         +    M   G  PNI  ++ LI
Sbjct: 200 AVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
              C+ G       + ++M +   +PDV  Y  +I G+C   +LE A G+L +M   G+ 
Sbjct: 260 GHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLS 319

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            NVV YN+L+ G C     E+A  + ++M +K    + VTF+ L+D  C+ G +D  + +
Sbjct: 320 PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEV 379

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             +M+    +PDV+ +T +I+G  K+G + E + L + M      P+  + + ++ GL  
Sbjct: 380 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS 439

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
             R  +A     +   +     C PN V +  +I  LC  G + +A +L   M  +   P
Sbjct: 440 AERWVDAEELMSQMIQQG----CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 495

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D  +Y+T++ GL +A    + + LL  M+K G+ P+ +I   +       G +    +  
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMF 555

Query: 567 EFLKESRIGS 576
           E ++++ + S
Sbjct: 556 ENIQDTTVRS 565



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 193/398 (48%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           GH+++ +         P I   + L+  L + G F+ V E + +M   G   DV  Y  +
Sbjct: 234 GHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C +  +  A  + + M   G+ P VV Y  L+ GLC+ ++  EAE +   M +   
Sbjct: 294 IDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDC 353

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             +  T+N L+D  C+   V+R +E   +ML H   P+V+T+  +++G CK G +  A  
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 413

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               MA  G  PN   Y  ++ G C A    +A  L S+M +    P+  T+N LI  LC
Sbjct: 414 LLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 473

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  LL++M   G   ++++Y+++IDG  K G+ ++AL + + M +KG+ PN +
Sbjct: 474 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTI 533

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +SS+       G I+  + ++  +   ++  D V++ A+I  L K G     +     M
Sbjct: 534 IYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYM 593

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + +   P+  T + LI GL   G +  A     E   K
Sbjct: 594 VSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSK 631



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 191/419 (45%), Gaps = 17/419 (4%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  ++ G C   ++  A  +  S+    V PN YTY  L+   C    +  AL    +M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P    + V ++  C+    R A      +   G   ++   N ++   C  G + 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 277 EAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           EA+ L  ++   F   PDV +YN +++GLC   +    + L+++M   G   N+VT+++L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C+ G  E+   V +QM E G  P+V  ++++IDG CK   ++ A G+   M    L
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG---RISN 452
            P+VV +  L+ GL      +E   L  EM +        T + L+  L +NG   R+  
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            L   LE         C P+ + Y  +I   C +G I +A  L   M +   RP+  +YT
Sbjct: 379 VLEQMLEHG-------CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYT 431

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
            +L+GL  A+R +D   L++ MI+ G  P+ V    ++    + G ++ A    E LK+
Sbjct: 432 IVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI---ELLKQ 487



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 138/272 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++ L + G  D V E  E+M+  G + DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P  V YTI++ GLC+  + V+AE +   M + G  PN  T+N L++  CK   V +
Sbjct: 421 CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 480

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G    A      M K G+ PN  +Y+ +  
Sbjct: 481 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIAS 540

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
                G + + + +   ++   +  D   YN +I  LC  G+ + A   L  M   G + 
Sbjct: 541 ALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG +++A  + +++  KG
Sbjct: 601 NESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 32/206 (15%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           NP  F+TLI                                N L KKG  +   E  ++M
Sbjct: 461 NPVTFNTLI--------------------------------NFLCKKGLVEQAIELLKQM 488

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           ++ G   D+++Y  +ID     G+  +AL L + M+ KG+ P  +IY+ +   L  E ++
Sbjct: 489 LVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRI 548

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +   MF ++++  V  +   YNA++   CK  + +RA+EF   M+     PN  T+ +L
Sbjct: 549 NKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTIL 608

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF 256
           + GL   G ++ A      +   G  
Sbjct: 609 IRGLASEGFVKEAQEILTELCSKGAL 634


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 255/547 (46%), Gaps = 99/547 (18%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSL-EIPKFNPSVFSTLI 59
           + ++LANAK Y   R L+    +N       H+   ++F++L+ L      N  +   L+
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKN------AHYSNSTIFHSLSVLGSWGCANSIIVDMLV 166

Query: 60  IAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
            A+ + G ++ AL  + +       L A+ +CN +L  L+K+G+              G+
Sbjct: 167 WAYVKNGEMDLALEGFDRAGDYGFRLSAL-SCNPMLVSLVKEGRI-------------GV 212

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V  V                      + EMI + I   VV + ++I+GLC   K  +A  
Sbjct: 213 VESV----------------------YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +   M+  G  P++ TYN ++DGYCK   + +A     EM+   + PN +TF +L+DG C
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           +   + AA   F  M + G+ PN+  YN LI+G C  G L EA+ L  +M    + P+V 
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TYN LI G C    L+ A  +L  + K G+  NV+T+N+LID Y K G M+ A  + S M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + GV PNV T++ LI G C+ GN+  A  L  EM    L  D+V +  L+D L K G  
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++ +RL  EM             +L+    K GR +N                     V 
Sbjct: 491 RKAVRLLDEM-------------TLME---KKGRRANI--------------------VT 514

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I+  C  G++ +A++L ++M    L P+  TY                 +L  +M+
Sbjct: 515 YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD----------------ILRDEMM 558

Query: 536 KMGIVPD 542
           + G +PD
Sbjct: 559 EKGFIPD 565



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 214/407 (52%), Gaps = 12/407 (2%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +I  +L+       +M  A   F    + G   +  + N ++    K   +      Y E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+   +  NVVTF V+++GLCKVG+ + AG+    M  +G  P++  YN +IDG+CKAG 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +F+A +L  EM    I P+  T+NILI G C    +  A+ + ++M ++G+  NVVTYNS
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+G C  G +++AL +  +M+  G++PNVVT+++LI+G CK   +  A  +  ++  + 
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L P+V+ F  LID   K G M +   L   ML+  + P+V T + LI G  + G +  A 
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM---RSDNLRPDNCTY 511
               E     +G     + V Y  ++ ALC  G+  KA +L  +M        R +  TY
Sbjct: 460 KLAKE----MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVP-----DAVINQVMVRGY 553
             +++G     ++ +   LL +M++ G++P     D + +++M +G+
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGF 562



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 188/384 (48%), Gaps = 8/384 (2%)

Query: 185 VVPNLYTYN---ALMDGYCKVADVNRALEFYH-EMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           ++ N   YN   AL+D + K A  + +  F+   +L      N +   +L+    K GE+
Sbjct: 116 LLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEM 175

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A   F     +G   +    N ++    K G +    S+  EM +  I  +V T++++
Sbjct: 176 DLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVV 235

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I GLC VG+ + A  +++ M   G   +V+TYN++IDGYCK G M KA ++  +M  K +
Sbjct: 236 INGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            PN +TF+ LIDG C+  N+ AA  ++ EM  + L P+VV + +LI+GL  +G + E L 
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG 355

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  +M    + P+V T ++LI+G  K   +  A     E  D       +PN + +  +I
Sbjct: 356 LQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR----EMLDDIGKRGLAPNVITFNTLI 411

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            A    G++  A  L S M    + P+  TY  ++ G  R   + +   L  +M   G+ 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 541 PDAVINQVMVRGYQENGDLKSAFR 564
            D V   ++V    + G+ + A R
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVR 495



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 4/173 (2%)

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           ++   L+    K+G M   L  +    +     S  + + ++  L K GRI    + + E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
              +  G     N V +  +I  LC  G+  KA  +  DM++    P   TY T++ G  
Sbjct: 220 MIRRRIG----VNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
           +A +M     LL +M+   I P+ +   +++ G+  + ++ +A +  E ++  
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 217/398 (54%), Gaps = 3/398 (0%)

Query: 69  EEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           ++AL  +R +   + LP I   + L + +++ G +++V    +E+   G+  D+ +  +L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I+C C    V   L++  +++  G+EP++V +T L++GLC E KM +   ++  M   G+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            PN+YTYN +++   K    N AL F  +M      PNVV +  L+DG C  G++  A +
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M   G  PN++ Y  L++G+CK   + EA+ L  E  +  + PD+ T+  +I GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+   A+ L + +   G   N++TY  L+DG CK G++E+A ++  +M    V+PN+V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            ++ LID  CK G I     L++ ++ + L P+V  +TAL+  L K+G + E  +L+++M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            E   TP     + +I G  ++   S A     E  ++
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNR 441



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 191/368 (51%), Gaps = 3/368 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
            S LI  F  +  ++  L V  KI  L   P+I     LLNGL  +GK D V   Y++M+
Sbjct: 100 LSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML 159

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           + GL  +V TY V+I+     G   +AL    +M   G  P VV Y+ LI G C   +M 
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD 219

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA S+F  M   G  PN+YTY +LM+GYCK+  +  A++   E L   L P++VTF  ++
Sbjct: 220 EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTII 279

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GLC+ G   AA   F ++   G  PNI  Y  L+DG CK GNL EA +L  EM++  + 
Sbjct: 280 SGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++  Y ILI  LC  G+++  + L  ++  EG+  NV TY +L+   CKEG + +A  +
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKL 399

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M E G  P+   ++ +I G  +  +   A  L  EMV +    D      L D  + 
Sbjct: 400 FRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDFPTN 459

Query: 412 DGNMKETL 419
           D    +TL
Sbjct: 460 DIPALKTL 467



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 214/412 (51%), Gaps = 4/412 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL  F  M+ +   P +V ++ L   +           + + +   G+  ++++ + L++
Sbjct: 46  ALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILIN 105

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  V+  L    ++L   L+P++VTF  L++GLC  G++      +  M   G+ P
Sbjct: 106 CFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP 165

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N++ YN +I+   K+G   EA+    +MEK    P+V  Y+ LI G C  GQ++ A  + 
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M  +G   NV TY SL++GYCK   +E+A+ +  +   KG+ P++VTF+++I G C+A
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRA 285

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G   AA  L+  +      P+++ +  L+DGL K GN++E   L++EM  + + P++   
Sbjct: 286 GRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIY 345

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI  L K G+I +    F    D+       PN   Y A++ ALC +G I++A KLF 
Sbjct: 346 TILIDSLCKCGKIKDGKELFSRLIDEG----LKPNVYTYTALVGALCKEGLIIEAHKLFR 401

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            M  D   PD C Y  +++G L+ K       L+ +M+  G   DA    ++
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 217/419 (51%), Gaps = 5/419 (1%)

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           N +  K K D++  F   M+L   +  +V +  L       G     + L  E+   GIE
Sbjct: 36  NKVWFKDKDDALASF-RLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIE 94

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
             +   +ILI+  C+ +++    S+   + + G+ P++ T+  L++G C    +++ +  
Sbjct: 95  QDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMML 154

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
           Y +ML   LQPNV T+ V+++ L K G+   A  F   M K G  PN+  Y+ LIDG+C 
Sbjct: 155 YDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCL 214

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G + EA S+   M     +P+V+TY  L+ G C + ++E A  LL +  ++G++ ++VT
Sbjct: 215 RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           + ++I G C+ G    A  +   +   G  PN++T+  L+DG CK GN++ A  L+ EM 
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQ 334

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
             ++ P++V++T LID L K G +K+   L+  +++  + P+V+T ++L+  L K G I 
Sbjct: 335 RSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLII 394

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            A   F  +  + DG  C+P+   Y  IIQ          A +L  +M +     D  T
Sbjct: 395 EAHKLF--RKMEEDG--CTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 212/423 (50%), Gaps = 9/423 (2%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A + FR M     +P +  ++ L     ++      +    E+    ++ ++ +  +L+
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +  C +  +    +    + K G+ P+I  +  L++G C  G + + M L  +M    + 
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V+TYN++I  L   G+   A G L++M K G + NVV Y++LIDGYC  G M++A SV
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  KG  PNV T++SL++G CK   I+ A+ L  E + K LVPD+V FT +I GL +
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G      +L++ +     TP++ T   L+ GL K+G +  A   F E    T      P
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST----VKP 340

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V+Y  +I +LC  G+I    +LFS +  + L+P+  TYT ++  L +   +++   L 
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
             M + G  PD     V+++G+ ++ D   A +    L E  +    +    TR+ L   
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQ----LVEEMVNRGFSADAATRALLNDF 456

Query: 592 KPT 594
            PT
Sbjct: 457 -PT 458



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 3/389 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FS L  +   MGH E  +++ ++IE L     I + + L+N      + D       +++
Sbjct: 65  FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL   +VT+  L++  C +G + + + L+D+M+ +G++P V  Y ++I+ L    K  
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA    + M + G VPN+  Y+ L+DGYC    ++ A   +  M+     PNV T+  LM
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +G CK+  +  A        + G+ P+I  +  +I G C+AG    A  L   +     +
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHT 304

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P++ TY +L+ GLC  G LE A  L Q+M +  +  N+V Y  LID  CK G ++    +
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKEL 364

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S++ ++G++PNV T+++L+   CK G I  A  L+ +M      PD   +  +I G  +
Sbjct: 365 FSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             +     +L +EM+    +    T + L
Sbjct: 425 HKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 200/430 (46%), Gaps = 7/430 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKV--ADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +A   FR  ++ G++   ++  +   G+ KV   D + AL  +  ML     P +V F  
Sbjct: 8   QALVKFRLQQQIGIMGFFFSSFSSGSGHNKVWFKDKDDALASFRLMLLRKPLPCIVEFSK 67

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L   + ++G           +   G+  +I   + LI+  C    +   +S+ S++ K  
Sbjct: 68  LFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG 127

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P + T+  L+ GLC  G+++    L   M   G+  NV TYN +I+   K G   +AL
Sbjct: 128 LEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEAL 187

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
               QM + G  PNVV +S+LIDG C  G +D A  ++  MV K   P+V  +T+L++G 
Sbjct: 188 GFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGY 247

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K   ++E ++L  E L   + P + T +++I GL + GR   A   F            
Sbjct: 248 CKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH---- 303

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           +PN + Y  ++  LC  G + +A  LF +M+   ++P+   YT ++  L +  ++ D   
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT-TRSFL 588
           L + +I  G+ P+      +V    + G +  A +    ++E      +   +   + FL
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFL 423

Query: 589 GHLKPTVYKE 598
            H  P++ ++
Sbjct: 424 QHKDPSMARQ 433


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 231/457 (50%), Gaps = 5/457 (1%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           + G +       E MV  G   DV+    LI       +V KA+ +  E+++K  +P V 
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVF 155

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  LI+G C  N++ +A  +   MR     P+  TYN ++   C    ++ AL+   ++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           L  N QP V+T+ +L++     G +  A      M   G+ P++F YN +I G CK G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  +   +E     PDV +YNIL++ L   G+ E  E L+ KM+ E    NVVTY+ L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C++G +E+A+++   M EKG+ P+  ++  LI   C+ G +D A+     M+    
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           +PD+V +  ++  L K+G   + L ++ ++ E   +P+  + +++   L+ +G    AL+
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             LE    ++G    P+ + Y ++I  LC +G + KA +L  DMRS    P   TY  +L
Sbjct: 456 MILEMV--SNG--IDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            G  +A R+ D + +L  M+  G  P+     V++ G
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
           +NP V   + LI  F  + ++ +A+ V   +E    P + A NAL+NG  K  + D    
Sbjct: 116 YNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATR 175

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M       D VTY ++I   C +G +  AL + D+++    +PTV+ YTILI    
Sbjct: 176 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATM 235

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  + EA  +   M   G+ P+++TYN ++ G CK   V+RA E    +     +P+V+
Sbjct: 236 LEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVI 295

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+  L   G+          M      PN+  Y+ LI   C+ G + EAM+L   M
Sbjct: 296 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  ++PD ++Y+ LI   C  G+L+ A   L+ M  +G L ++V YN+++   CK G  
Sbjct: 356 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL +  ++ E G  PN  +++++      +G+   A+ +  EMV   + PD + + ++
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSM 475

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L ++G + +   L  +M   +  PSV T + ++ G  K  RI +A++      D   
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVL----DSMV 531

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           G  C PN   Y  +I+ + + G   +A +L +D+
Sbjct: 532 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 207/424 (48%), Gaps = 5/424 (1%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G+ +++L+L + M+ KG  P V++ T LI G      + +A  +   + + G  P++
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDV 154

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + YNAL++G+CK+  ++ A      M   +  P+ VT+ +++  LC  G+L  A      
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +      P +  Y  LI+     G + EA+ L  EM    + PD+FTYN +I+G+C  G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  +++ +  +G   +V++YN L+     +G  E+   + ++M  +  +PNVVT+S 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI   C+ G I+ AM L   M  K L PD   +  LI    ++G +   +   + M+   
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P +   ++++  L KNG+   AL  F     K     CSPN   Y  +  AL   G  
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIF----GKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           ++A  +  +M S+ + PD  TY +M+  L R   +     LL DM      P  V   ++
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 550 VRGY 553
           + G+
Sbjct: 511 LLGF 514



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 195/404 (48%), Gaps = 5/404 (1%)

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           + H  C     +E+  +  +M   G  P++     L+ G+  + +V +A+    E+L   
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
            QP+V  +  L++G CK+  +  A      M      P+   YN +I   C  G L  A+
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            +  ++      P V TY ILI+     G ++ A  LL +M   G+  ++ TYN++I G 
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CKEG +++A  +   +  KG EP+V++++ L+      G  +    L T+M  +   P+V
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           V ++ LI  L +DG ++E + L K M E  +TP  ++   LI    + GR+  A+ F   
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL-- 387

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
           +T  +DG  C P+ V Y  ++  LC +G+  +A ++F  +      P++ +Y TM   L 
Sbjct: 388 ETMISDG--CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            +   +  + ++ +M+  GI PD +    M+      G +  AF
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 52  PSVFSTLIIAFSEM--GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V +  I+  + M  G ++EAL +  ++    + P +   N ++ G+ K+G  D  +E 
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              + L G   DV++Y +L+     QG   +   L  +M  +  +P VV Y+ILI  LC 
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + K+ EA ++ + M+E G+ P+ Y+Y+ L+  +C+   ++ A+EF   M+     P++V 
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++  LCK G+   A   F  + + G  PN   YN +      +G+   A+ +  EM 
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PD  TYN +I  LC  G ++ A  LL  M       +VVTYN ++ G+CK   +E
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 521

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            A+ V   M   G  PN  T++ LI+G   AG    AM L  ++V
Sbjct: 522 DAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 3/168 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T++    + G  ++AL ++ K+  +   P   + N + + L   G          EMV
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D +TY  +I C C +G V KA  L  +M      P+VV Y I++ G C  +++ 
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 521

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +A  +  SM   G  PN  TY  L++G         A+E  ++++  N
Sbjct: 522 DAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIN 569


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 245/494 (49%), Gaps = 9/494 (1%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
           ++L++A    G + +AL  ++     P + + N LL G   +  F+ V     EM   G+
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGI 60

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG------IE-PTVVIYTILIHGLCNEN 168
            ++  T+GV++   C + D+ KA++ F+   ++       IE P  V YT ++ GL    
Sbjct: 61  TSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAG 120

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
                   +  M      P L TY  L+DG CK   V RA + + EM+    +P+++ + 
Sbjct: 121 NYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYS 180

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+DGL K G +  A      M   G  P    Y  ++ G CK G + EA+    EM + 
Sbjct: 181 SLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRR 240

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            + P V TY+ ++ G  G+G++E A  ++++M       + ++Y   I+     G  E+A
Sbjct: 241 RLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 300

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V   M EKG +P++ T+  +ID  CK G++ AA  +   M   ++ P+  ++T ++DG
Sbjct: 301 EKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 360

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
             K   ++E L LY+ +L+  I PS  T +++I+ L K  ++  AL    E   + +   
Sbjct: 361 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE--E 418

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+ V Y+ II  L   G   +A  L ++M  + + PD  TYT++++ L  A ++   M
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAM 478

Query: 529 MLLADMIKMGIVPD 542
            LL +M+K GI PD
Sbjct: 479 ELLEEMLKAGIFPD 492



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 174/373 (46%), Gaps = 23/373 (6%)

Query: 20  DVTENLL-KSRKPHHVCYSVF-------------NALNSLEIPKFNPSV---FSTLIIAF 62
           DV E ++ K  KP  + YS                 L  L I +  P     +++++   
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221

Query: 63  SEMGHIEEALWVYRKIEVLPAIQACNA---LLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
            + G I+EA+   +++         +    ++ G I  GK +  +   EEM       D 
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDT 281

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           ++Y + I+     G   +A  +F+ M++KG +P +  Y I+I   C E  M  A  + R 
Sbjct: 282 ISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 341

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M +  V PN Y Y  +MDG+ K + +  ALE Y  +L   + P+ VT+  +++ LCK+ +
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 401

Query: 240 LRAAGNFFVHMA--KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           +  A      M   K  + P+I  Y+ +I G  K G    A  L +EM    + PD FTY
Sbjct: 402 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 461

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             LI+ L G G++  A  LL++M K GI  +  TY +L+   C+  D++ A  +  +M  
Sbjct: 462 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMR 520

Query: 358 KGVEPNVVTFSSL 370
            G  PN  TF ++
Sbjct: 521 NGHTPNEFTFKAV 533



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 182/401 (45%), Gaps = 14/401 (3%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           PN+ ++N L+ G+    D         EM    +  N  T GV++  LC   +L  A ++
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 247 FVHMAKFGV-------FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           F    +           P+   Y  ++DG  KAGN    +    +M   +  P + TY +
Sbjct: 87  FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTV 146

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ GLC   ++E A  + ++M ++G   +++ Y+SLIDG  K G +++A  +   M  +G
Sbjct: 147 LVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARG 206

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P  V ++S++ G CK G I  A+    EM  + L P V  ++ ++ G    G ++E  
Sbjct: 207 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAF 266

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            + +EM +    P   + +  I  L+  GR   A   F    +K     C P+   Y  I
Sbjct: 267 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG----CKPDMHTYGII 322

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I   C +G +  A+ +   M    ++P+   YT ++ G +++ R+ + + L   ++K GI
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
           +P  V    ++    +   LK      E L+E +    E E
Sbjct: 383 LPSTVTYNTVINALCK---LKKMDEALELLREMQRRKEELE 420



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 20/319 (6%)

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEIS---PDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           N L+    + G L +A+        F+ S   P+V ++NIL++G       E    LL++
Sbjct: 1   NSLLLALVRGGQLSDALGF------FQSSISEPNVSSFNILLRGFAARDDFEVVNALLRE 54

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE-------PNVVTFSSLID 372
           M   GI +N  T+  ++   C   D++KA+S  +  TE+          P+ VT+++++D
Sbjct: 55  MKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVD 114

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  KAGN DA +  Y +MV     P ++ +T L+DGL K   ++    +++EM+     P
Sbjct: 115 GLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP 174

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +   SSLI GL K GR+  A        D        P  V Y +I+  LC  G+I +A
Sbjct: 175 DIIAYSSLIDGLSKAGRVDEARKL----VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEA 230

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            K   +MR   LRP   TY+ ++ G +   ++ +   ++ +M      PD +   + +  
Sbjct: 231 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEA 290

Query: 553 YQENGDLKSAFRCSEFLKE 571
               G  + A +  E + E
Sbjct: 291 LYSIGRREEAEKVFETMVE 309


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 219/427 (51%), Gaps = 41/427 (9%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           +Y  +I   C  G    AL LFD+M D+ G  P  V ++  + G C    +++A     +
Sbjct: 113 SYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS-FVAGSCTNAGLLDAAVTLLT 171

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
                                K +   R +E Y              +  L++ L   G 
Sbjct: 172 ---------------------KASQFGRRIEPY-------------AYNNLLNLLIARGR 197

Query: 240 LRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            + A   F    + G++ P+ + +N +I G C+ GN  +A+ L   M +F  SPD  T+N
Sbjct: 198 AQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHN 257

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           IL+ GLC   Q+     LL+++ ++G+ + NVVTY S+I GYCK G ME ALSV + M E
Sbjct: 258 ILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLE 317

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  PN VT++ LI+G  KA ++++A+ +Y +++++   PDVV F++LIDG  + G + +
Sbjct: 318 SGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDD 377

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
            +R++KEM +  I P+V+T S +IH L K  R + AL F  E   + D    +P   +Y 
Sbjct: 378 AMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRAD---IAPQTFIYN 434

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I  LC  GQ+ +A+ + +DM      PD  TYT ++ G     R+ + + L   M++ 
Sbjct: 435 PVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVET 494

Query: 538 GIVPDAV 544
           G  PD +
Sbjct: 495 GCRPDKI 501



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGD 134
           R+IE      A N LLN LI +G+       +E  +  GL + D  ++ V+I   C  G+
Sbjct: 178 RRIEPY----AYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGN 233

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYN 193
             KAL L + M + G  P  + + IL+ GLC   ++     + R ++  GV +PN+ TY 
Sbjct: 234 FQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYT 293

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           +++ GYCK   +  AL  Y++ML    +PN VT+ VL++G  K  ++ +A   +  +   
Sbjct: 294 SVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILR 353

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
              P++  ++ LIDG+C+ G L +AM +  EM +  I P+V+T++I+I  LC   +   A
Sbjct: 354 RCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEA 413

Query: 314 EGLLQKM-YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
            G L+++  +  I      YN +ID  CK G +E+A  + + M EKG  P+  T++ LI 
Sbjct: 414 LGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILII 473

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           G C  G I  A+ L+ +MV     PD +   + I  + K G   E
Sbjct: 474 GHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNE 518



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 170/337 (50%), Gaps = 8/337 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEAL-----WVYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
           +  P  ++ L+      G  ++A+     W+   +   P   + N ++ G+ + G F   
Sbjct: 179 RIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYS-PDGWSFNVVIKGVCRVGNFQKA 237

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIH 162
            E  E M   G   D +T+ +L+D  C    V +  +L   +   G+  P VV YT +I 
Sbjct: 238 LELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVIS 297

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G C   +M +A S++  M E G  PN  TYN L++GY K  D+  A+  Y +++     P
Sbjct: 298 GYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPP 357

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +VVTF  L+DG C+ G+L  A   +  M +  + PN++ ++ +I   CK     EA+   
Sbjct: 358 DVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFL 417

Query: 283 SEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            E+  + +I+P  F YN +I  LC  GQ+E A  ++  M ++G   +  TY  LI G+C 
Sbjct: 418 RELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCM 477

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +G + +A+++  +M E G  P+ +T +S I    KAG
Sbjct: 478 KGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAG 514



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 205/441 (46%), Gaps = 51/441 (11%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV-LCGLVADVVTYGVLIDCCCGQGDVM 136
           + V P+ Q+ + ++  L + G+     + +++M    G + D V +  +   C   G + 
Sbjct: 105 LSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLD 164

Query: 137 KALNLFDEMIDKG--IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYN 193
            A+ L  +    G  IEP    Y  L++ L    +  +A ++F S  + G+  P+ +++N
Sbjct: 165 AAVTLLTKASQFGRRIEPYA--YNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFN 222

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            ++ G C+V +  +ALE    M      P+ +T  +L+DGLC+  ++    +    + + 
Sbjct: 223 VVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRD 282

Query: 254 GV-FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
           GV  PN+  Y  +I G+CKAG + +A+S+ ++M +    P+  TYN+LI G      +E 
Sbjct: 283 GVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 342

Query: 313 AEGLLQKMYKEGIL----ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           A     +MY++ IL     +VVT++SLIDGYC+ G ++ A+ +  +M +  ++PNV TFS
Sbjct: 343 AV----RMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFS 398

Query: 369 ------------------------------------SLIDGQCKAGNIDAAMGLYTEMVI 392
                                                +ID  CK G ++ A  + T+M  
Sbjct: 399 IIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEE 458

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K   PD   +T LI G    G + E + L+ +M+E    P   TV+S I  + K G  + 
Sbjct: 459 KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNE 518

Query: 453 ALNFFLEKTDKTDGGYCSPNH 473
                L  +         P+H
Sbjct: 519 VDQIMLIASGHASASQKVPSH 539



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 7/290 (2%)

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKE-GDM 345
             + P   +Y+ +I  LC  G+   A  L  +M  + G L + V + S + G C   G +
Sbjct: 105 LSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFF-SFVAGSCTNAGLL 163

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTA 404
           + A+++ ++ ++ G       +++L++     G    A+ L+   +   L  PD   F  
Sbjct: 164 DAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNV 223

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I G+ + GN ++ L L + M E   +P   T + L+ GL +  +++   +  L +  + 
Sbjct: 224 VIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDL-LRRLQRD 282

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
             G C PN V Y ++I   C  G++  A  +++DM     RP+  TY  ++ G  +A  M
Sbjct: 283 --GVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDM 340

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              + +   +I     PD V    ++ GY   G L  A R  + + +  I
Sbjct: 341 ESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHI 390



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 7/306 (2%)

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCG 306
           +H     V P+   Y+ +I   C++G   +A+ L  +M ++    PD   ++ +      
Sbjct: 100 LHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTN 159

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVV 365
            G L+ A  LL K  + G       YN+L++     G  + A+++     + G+  P+  
Sbjct: 160 AGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGW 219

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           +F+ +I G C+ GN   A+ L   M      PD +    L+DGL +   +     L + +
Sbjct: 220 SFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRL 279

Query: 426 LEAKI-TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
               +  P+V T +S+I G  K GR+ +AL+ +    D  + G   PN V Y  +I    
Sbjct: 280 QRDGVCMPNVVTYTSVISGYCKAGRMEDALSVY---NDMLESG-TRPNTVTYNVLINGYG 335

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
               +  A +++  +      PD  T+++++ G  R  ++ D M +  +M +  I P+  
Sbjct: 336 KALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVY 395

Query: 545 INQVMV 550
              +++
Sbjct: 396 TFSIII 401


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 233/474 (49%), Gaps = 8/474 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+ GL K+G+        +EM L G+V  V TY  +ID  C  G +  AL +   M   G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P    Y  LI+GLC   K+ EAE +       G  P + T+  L++GYCK   ++ AL
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
                M+  N + ++  +GVL++ L K   L+ A      M   G+ PN+ +Y  +IDG+
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A+ +   ME     P+ +TY  LI GL    +L  A  L+ KM ++GI   V
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           + Y +LI G CK+ + + A  +   M + G+ P+   ++ L D  CK+G  + A   Y+ 
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSF 585

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +V K +V   V +T+L+DG SK GN      L ++M+       ++T S L+  L K  +
Sbjct: 586 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           ++ AL+   + T    G  C  N V Y  II  +  +G+   A  LF++M S   +P   
Sbjct: 646 LNEALSILDQMT--VSGVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSAT 701

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           TYT  +    +  ++ +   L+ +M + G+ PD V   + + G    G +  AF
Sbjct: 702 TYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAF 755



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 242/540 (44%), Gaps = 24/540 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPA-----IQACNALLNGL 94
           LN      F P+V  F+ LI  + +   I++AL V  K  ++ +     +QA   L+N L
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRV--KSNMISSNCKLDLQAYGVLINVL 433

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           IKK +     E   EM   GL  +VV Y  +ID  C  G V  AL +F  M  +G  P  
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  LI+GL  + K+ +A ++   M+E G+ P +  Y  L+ G CK  + + A   +  
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEM 553

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  + L P+   + VL D LCK G    A +F V   + GV      Y  L+DG  KAGN
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGN 610

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              A  L  +M       D++TY++L++ LC   +L  A  +L +M   G+  N+V Y  
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I    KEG  + A S+ ++M   G +P+  T++  I   CK G I+ A  L  EM    
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN-- 452
           + PDVV +   I+G    G M       K M++A   P+ +T   L+    K   I+   
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHY 790

Query: 453 ----------ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
                      LN   +  ++      +P  V Y++II   C   ++ +A  L   M   
Sbjct: 791 IDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            + P+   YT +++     K     +  + DMI+ G  P       ++ G  + GD   A
Sbjct: 851 AISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRA 910



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 228/471 (48%), Gaps = 8/471 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L++    + + + Y  +V  GL+ D VTY  +I   C +G +  A   F  + +
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRE 207

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G++        L+ G C  + + +A  +   M   G   N Y+Y  L+ G  +   V  
Sbjct: 208 SGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVRE 267

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL     M+      N+  + +L+ GLCK G +  A      M   GV P+++ YN +ID
Sbjct: 268 ALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMID 327

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK+G + +A+ + + ME+   +PD +TYN LI GLCG G+L+ AE LL      G   
Sbjct: 328 GYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTP 386

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V+T+ +LI+GYCK   ++ AL V S M     + ++  +  LI+   K   +  A    
Sbjct: 387 TVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL 446

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    L P+VV++T++IDG  K G +   L ++K M      P+ +T  SLI+GL ++
Sbjct: 447 NEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            ++  A+    +  +  DG   +P  + Y  +IQ  C   +   A +LF  M  + L PD
Sbjct: 507 KKLHKAMALITKMQE--DG--ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPD 562

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
              Y  +   L ++ R  +    L   ++ G+V   V    +V G+ + G+
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGN 610



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 8/457 (1%)

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVV---IYTILIHGLCNENKMVEAESMFRSMR 181
           +I C     DV +A++    +   G +  V+    Y + +  L   +       ++  + 
Sbjct: 112 MISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLV 171

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G++P+  TYN ++  YCK   +  A  ++  +    +Q +  T   L+ G C+  +LR
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A    + M   G   N + Y  LI G  +A  + EA+ L   M +   S ++  Y +LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLI 291

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           KGLC  G++  A GLL +M   G++ +V TYN++IDGYCK G M+ AL + + M + G  
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCN 351

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+  T++SLI G C  G +D A  L    + +   P V+ FT LI+G  K   + + LR+
Sbjct: 352 PDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
              M+ +     +     LI+ L K  R+  A     E  ++      +PN V+Y +II 
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEA----KETLNEMFANGLAPNVVIYTSIID 466

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             C  G +  A ++F  M  +   P+  TY +++ GL++ K++   M L+  M + GI P
Sbjct: 467 GYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
             +    +++G  +  +  +AFR  E ++++ +   E
Sbjct: 527 GVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDE 563



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 223/503 (44%), Gaps = 26/503 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  +++++I  + ++G +  AL V++ +E     P      +L+ GLI+  K        
Sbjct: 457 NVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G+   V+ Y  LI   C + +   A  LF+ M   G+ P    Y +L   LC  
Sbjct: 517 TKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKS 576

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +  EA S    +R+ GVV    TY +L+DG+ K  + + A     +M++   + ++ T+
Sbjct: 577 GRAEEAYSFL--VRK-GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTY 633

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+  LCK  +L  A +    M   GV  NI  Y  +I    K G    A SL +EM  
Sbjct: 634 SVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMIS 693

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P   TY + I   C +GQ+E AE L+ +M ++G+  +VVTY+  I+G    G M++
Sbjct: 694 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDR 753

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA----------------AMGLYTEMV 391
           A S   +M +   EPN  T+  L+    K   I+A                   L   M+
Sbjct: 754 AFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMM 813

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P VV ++++I G  K   ++E   L   ML   I+P+    + LI          
Sbjct: 814 KHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFG 873

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             ++F    TD  + G+  P    Y  +I  LC +G   +A  LF D+   +   +   +
Sbjct: 874 KDVSFV---TDMIEFGF-QPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAW 929

Query: 512 TTMLRGLLRAKRMLDVMMLLADM 534
             +  GLL+A  +     LLA M
Sbjct: 930 KILNDGLLKAGHVDFCSQLLAAM 952



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 199/486 (40%), Gaps = 68/486 (13%)

Query: 1   IFYVLANAKLYKNARCLIKDVTEN-----------LLKSRKPHHVCYSVFNALNSLEIPK 49
           I+ ++ + KL+K A  LI  + E+           L++ +   H   + F     +E   
Sbjct: 500 IYGLIQDKKLHK-AMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNG 558

Query: 50  FNP--SVFSTLIIAFSEMGHIEEAL-WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
             P    ++ L  A  + G  EEA  ++ RK  VL  +    +L++G  K G  D     
Sbjct: 559 LTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTY-TSLVDGFSKAGNTDFAAVL 617

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E+MV  G  AD+ TY VL+   C Q  + +AL++ D+M   G++  +V YTI+I  +  
Sbjct: 618 IEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIK 677

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E K   A+S+F  M   G  P+  TY   +  YCK+  +  A     EM    + P+VVT
Sbjct: 678 EGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVT 737

Query: 227 FGVLMDGLCKVG------------------------------------------------ 238
           + + ++G   +G                                                
Sbjct: 738 YHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMW 797

Query: 239 ---ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
              EL         M K G+ P +  Y+ +I G CKA  L EA  L   M    ISP+  
Sbjct: 798 NWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEE 857

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            Y +LIK  C +         +  M + G    + +Y+ LI G C EGD ++A S+   +
Sbjct: 858 IYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK-DGN 414
                  N V +  L DG  KAG++D    L   M  +    D   ++ L D + +  G+
Sbjct: 918 LGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIREASGS 977

Query: 415 MKETLR 420
           +   LR
Sbjct: 978 VVSELR 983


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 234/463 (50%), Gaps = 5/463 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLN   + GK++    F E MV  G   DV+    LI       ++ KA  +  E++++ 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P V  Y  LI G    N++  A  +   M+  G +P++ TYN ++  +C    ++ AL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E + E+L  N +P V+T+ +L++     G +  A      M   G+ P+   YN +I G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK   + +A  L   +      PD+ TYNIL++ L   G+    E L+ +M   G   NV
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT++ LI   C++G +E+A+++   M EKG++P+   +  LI G C+ G +D A      
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+    +PD+V +  ++ GL + G   + L +++++ E    P+V + ++L   L+ +G 
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
              AL   L+  ++       P+ + Y ++I  LC DG + +A +L  DM+S   RP+  
Sbjct: 434 RYRALEMILKLLNQG----IDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +Y  +L GL +  R  D + +LA M + G  P+     +++ G
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 234/458 (51%), Gaps = 8/458 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
           + P V   + LI  F    +I +A  V   +E    P + A NAL++G IK  + ++   
Sbjct: 100 YTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANR 159

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M   G + DVVTY ++I   C +G +  AL +F+E++    EPTV+ YTILI    
Sbjct: 160 VLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATI 219

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  +  A  +   M   G+ P+  TYNA++ G CK   V++A E    +     +P+++
Sbjct: 220 LDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDII 279

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+  L   G+          M   G  PN+  ++ LI   C+ G + EA++L   M
Sbjct: 280 TYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  + PD + Y+ LI G C  G+L+ A   L+ M  +G L ++V YN+++ G C+ G  
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKA 399

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL V  ++ E G  PNV ++++L      +G+   A+ +  +++ + + PD + + +L
Sbjct: 400 DQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSL 459

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L +DG + E + L  +M   +  P+V + + ++ GL K  R ++A+      T+K  
Sbjct: 460 ISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG- 518

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
              C PN   Y  +I+ + + G   +A +L + +   N
Sbjct: 519 ---CQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN 553



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 5/188 (2%)

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           V    L++  C+AG  + ++     MV K   PDV++ T LI G     N+ +  R+  E
Sbjct: 70  VHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-E 128

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           +LE    P VF  ++LI G  K  ++ NA N  L++  K+ G    P+ V Y  +I + C
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENA-NRVLDRM-KSRGFL--PDVVTYNIMIGSFC 184

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A ++F ++  DN  P   TYT ++   +    +   M LL +M+  G+ PD +
Sbjct: 185 SRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL 244

Query: 545 INQVMVRG 552
               ++RG
Sbjct: 245 TYNAIIRG 252


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 246/517 (47%), Gaps = 11/517 (2%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           F  S F  L+  +     IE+ L   R   V    +A + +L+   + G      E Y+ 
Sbjct: 100 FACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDY 159

Query: 110 MV-LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +V L   V DV+    L+        +  A  ++DEM D+G         IL+ G+CNE 
Sbjct: 160 VVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEG 219

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+     +       G +PN+  YN ++ GYCK+ D+  A   + E+      P + TFG
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +++G CK G+  A+      + + G+  +++  N +ID   + G   +       +   
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN 339

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
           +  PDV TYNILI  LC  G+ E A G L +  K+G++ N ++Y  LI  YCK  + + A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +  QM E+G +P++VT+  LI G   +G++D A+ +  +++ + + PD  ++  L+ G
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF---LEKTDKTD 465
           L K G       L+ EML+  I P  +  ++LI G  ++G    A   F   +EK  K D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                   V + A+I+  C  G + +A    + M  ++L PD  TY+T++ G ++ + M 
Sbjct: 520 V-------VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             + +   M K    P+ V    ++ G+   GD K A
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 243/518 (46%), Gaps = 24/518 (4%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I  + ++G IE A  V++++++   +P ++    ++NG  K+G F +      E+ 
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL   V     +ID     G  +        +I    +P V  Y ILI+ LC E K  
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A        + G++PN  +Y  L+  YCK  + + A +   +M     +P++VT+G+L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL   G +  A N  V +   GV P+  +YN L+ G CK G    A  L SEM    I 
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD + Y  LI G    G  + A  +     ++G+  +VV +N++I G+C+ G +++AL+ 
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            ++M E+ + P+  T+S++IDG  K  ++  A+ ++  M      P+VV +T+LI+G   
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTDGGYC 469
            G+ K     +KEM    + P+V T ++LI  L K         ++ E   T+K     C
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK-----C 657

Query: 470 SPNHVLYAAIIQALCY----------DGQILKASKLFSD----MRSDNLRPDNCTYTTML 515
            PN V +  ++Q              DG     S LFS+    M+SD        Y + L
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSAL 717

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
             L     +    M    M+K G  PD V    ++ G+
Sbjct: 718 VCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 192/446 (43%), Gaps = 70/446 (15%)

Query: 65  MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           +G ++EA     K  ++P   +   L+    K  ++D   +   +M   G   D+VTYG+
Sbjct: 365 VGFLDEA----SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI      G +  A+N+  ++ID+G+ P   IY +L+ GLC   + + A+ +F  M +  
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           ++P+ Y Y  L+DG+ +  D + A + +   +   ++ +VV    ++ G C+ G L  A 
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M +  + P+ F Y+ +IDG+ K  ++  A+ +   MEK +  P+V TY  LI G 
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD-MEKALSVCSQMTEKGVEPN 363
           C  G  + AE   ++M    ++ NVVTY +LI    KE   +EKA+     M      PN
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660

Query: 364 VVTFSSLIDG-------------------------------------------------Q 374
            VTF+ L+ G                                                  
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL------------- 421
           C  G +  A     +MV K   PD V F A++ G    GN K+   +             
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVA 780

Query: 422 --YKEMLEAKI-TPSVFTVSSLIHGL 444
             Y ++LE  +  P +   S+++H +
Sbjct: 781 VRYSQVLEQHLPQPVICEASTILHAM 806


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 243/515 (47%), Gaps = 32/515 (6%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P +      +N   K G+     + + +M   G+  +VVTY  +ID     G   +AL
Sbjct: 251 VAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEAL 310

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
              D M+   + P+VV Y +LI GL       EA  +   M   G  PN   +NAL+DGY
Sbjct: 311 RFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGY 370

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  D+  AL    EM    ++PN VTF  L+ G C+  ++  A    V++   G+  N+
Sbjct: 371 CRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNM 430

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV-GQLEGAEGLLQ 318
            V + +I    +      A+ + +++    I         L+ GLC   G  E  E   +
Sbjct: 431 DVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFK 490

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
               +G+ AN VT N+L+ G C+ G+ME+   V  QM EKG+  + +++++LI G CK G
Sbjct: 491 LAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWG 550

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            I+ A  L  EMV +   PD   +  L+ GL+  G + +  RL  E  E    P+V+T +
Sbjct: 551 KIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYA 610

Query: 439 SLIHGLFKNGRISNALNFF----LEKTDKTD-------GGYCS----------------- 470
            L+ G  K  RI +A+ FF     EK + +          YC                  
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670

Query: 471 ---PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P    Y+++I  +C  G++ +A ++F +MR++ L P+   YT ++ G  +  +M  V
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIV 730

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +L +M   GI P+ +   +M+ GY + G++K A
Sbjct: 731 GSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 3/365 (0%)

Query: 90  LLNGLIK-KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
           L+ GL K +G  +++  +++   + GL A+ VT   L+   C +G++ +   +  +M++K
Sbjct: 471 LVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEK 530

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G+    + Y  LI G C   K+ EA  +   M +    P+ YTYN LM G   +  ++  
Sbjct: 531 GLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDV 590

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
               HE   +   PNV T+ +L++G CK   +  A  FF ++    V  +  VYN LI  
Sbjct: 591 HRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAA 650

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +C+ GN+ EA  L   M+   I P   TY+ LI G+C +G+++ A+ + ++M  EG+L N
Sbjct: 651 YCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPN 710

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V  Y +LI G+CK G M+   S+  +M+  G+ PN +T++ +IDG CK GN+  A  L  
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEMLEAKITPSVFTVSSLIHGLFKN 447
           EM+   + PD V + AL  G  K+  +  TL+  +K  +   +   + T ++LIH L  +
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEI-TYNTLIHKLHPH 829

Query: 448 GRISN 452
             ISN
Sbjct: 830 TAISN 834



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 210/443 (47%), Gaps = 16/443 (3%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA-----IQACNALLNGLIKKGKFDSV 103
           K N   F+TL+  F     +E+A  V   + +L +     +  C+ +++ L+++  F S 
Sbjct: 392 KPNFVTFNTLLQGFCRSNQMEQAEQVL--VYILSSGLSVNMDVCSYVIHRLMERSGFVSA 449

Query: 104 WEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
            +   +++   + V+D +   +++  C  +G        F     KG+    V    L+H
Sbjct: 450 LKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLC    M E   + + M E G++ +  +YN L+ G CK   +  A +   EM+    QP
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +  T+  LM GL  +G++           ++G  PN++ Y  L++G+CKA  + +A+   
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629

Query: 283 SEM--EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             +  EK E+S  V  YNILI   C +G +  A  L   M   GIL    TY+SLI G C
Sbjct: 630 KNLDYEKVELSSVV--YNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMC 687

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G +++A  +  +M  +G+ PNV  +++LI G CK G +D    +  EM    + P+ +
Sbjct: 688 CIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKI 747

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +T +IDG  K GNMKE   L  EM+   I P   T ++L  G  K       L   L+ 
Sbjct: 748 TYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK----ERELTVTLQS 803

Query: 461 TDKTDGGYCSPNHVLYAAIIQAL 483
             K++ G      + Y  +I  L
Sbjct: 804 DHKSNIGLPLEEEITYNTLIHKL 826



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 216/445 (48%), Gaps = 44/445 (9%)

Query: 159 ILIHGLCNENKMVEAE---SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
           +L+H LC++ K + +     +F    + GV P L T N L+    K  +++++ E + ++
Sbjct: 188 LLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DL 246

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
               + P+V TF   ++  CK G +  A + F  M   GVFPN+  YN +IDG  K+G  
Sbjct: 247 ACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRF 306

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            EA+     M + +++P V TY +LI GL  +   E A  +L +MY  G   N V +N+L
Sbjct: 307 EEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNAL 366

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA---------MGL 386
           IDGYC++GDM +AL V  +M  KG++PN VTF++L+ G C++  ++ A          GL
Sbjct: 367 IDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGL 426

Query: 387 YTEM----------------------VIKSLVPDVVV----FTALIDGLSKDGNMKETLR 420
              M                      V K L  ++ V     T L+ GL K     E + 
Sbjct: 427 SVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIE 486

Query: 421 LYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
           L+ ++   K +  +  T ++L+HGL + G +        +  +K        + + Y  +
Sbjct: 487 LWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKG----LLLDRISYNTL 542

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           I   C  G+I +A KL  +M     +PD  TY  +++GL    ++ DV  LL +  + G 
Sbjct: 543 IFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGF 602

Query: 540 VPDAVINQVMVRGYQENGDLKSAFR 564
           VP+     +++ GY +   ++ A +
Sbjct: 603 VPNVYTYALLLEGYCKADRIEDAVK 627



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           ++ +L    ++ K+ ++F D+    + PD  T+TT +    +  R+ D + L   M  +G
Sbjct: 227 LLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLG 285

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
           + P+ V    ++ G  ++G  + A R  + +  S++  S
Sbjct: 286 VFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPS 324


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 165/591 (27%), Positives = 278/591 (47%), Gaps = 68/591 (11%)

Query: 33  HVCYSVFNALNSLE-------------IPKFNPSVFSTLIIAFSEM---GHIEEALWVYR 76
           H C +V NAL  +              + KF P   +T  I  + M   G+++ A  +  
Sbjct: 191 HACNAVLNALVEIGESKHVWFFLKEGLVRKF-PLDVTTCNIVLNSMCIEGNLKGAKHMIH 249

Query: 77  KIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           K++   LP +   N +L+  +KKG+F +     E+M   G+ ADV TY ++ID  C    
Sbjct: 250 KMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKR 309

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
              A  L   M    + P    Y  LI G  +E+KM+ A  +F  M   G+ P+L TY  
Sbjct: 310 STHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTT 369

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+DGYC+   ++ AL   +EM    ++P+ VT+  +++G      +  A + + +M K+G
Sbjct: 370 LIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYG 424

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             P+++ Y  L+ G CK G+L +A    S +     + D  T N L+ G+C  G L+ A 
Sbjct: 425 CSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEAL 484

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L +KM     + ++ TY  L+ G+C++G +  A+ +   M EKG+ P++VT++ L+ G 
Sbjct: 485 DLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGL 544

Query: 375 CKAGNIDAAMGLYTEMVIK------------------------------------SLVPD 398
            K G + AA  L+ E++ K                                     + P+
Sbjct: 545 IKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPN 604

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
              +  L+ G  K G++  ++ LYK+M+   I P+  T   LI GL K+G I  A+ F  
Sbjct: 605 PASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFL- 663

Query: 459 EKTDKT--DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
              DK   +G Y  P+ + +  +I A     ++  A +LF+ M+   + P + TY+ M+ 
Sbjct: 664 ---DKMVLEGIY--PDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMIN 718

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           GL+R   +     +L DM++ G+ P       ++      GD+  AFR  E
Sbjct: 719 GLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKE 769



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 268/529 (50%), Gaps = 21/529 (3%)

Query: 30  KPHHVCYSV---------FNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI 78
           KP  V YS          F+  +++E    +P V++   L+    + GH+ +A      I
Sbjct: 396 KPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCI 455

Query: 79  EVLPAI---QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
             +P+    +  NALL G+   G  D   +  E+MV    + D+ TY +L+   C +G +
Sbjct: 456 VHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKI 515

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTYN 193
           + A+ L   M++KG+ P +V YT L+ GL  E ++  A  +F+ +  +E G+  +   YN
Sbjct: 516 VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKE-GMYADCIAYN 574

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
           ++M+GY K   +++     ++M  + + PN  ++ +LM G  K G L  +   +  M + 
Sbjct: 575 SMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRK 634

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ P    Y  LI G  K G +  A+    +M    I PD  ++++LI       ++  A
Sbjct: 635 GIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDA 694

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L   M    +  +  TY+++I+G  ++  ++ +  V   M E G+EP    + +LI+ 
Sbjct: 695 LQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINA 754

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           +C+ G+I+ A  L  EM    +VP  V  ++++ GLSK G ++E + ++  ++ A + P+
Sbjct: 755 KCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPT 814

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           + T ++L+HGL K  +IS+AL+  L+   ++ G     + V Y  +I  LC    +  A 
Sbjct: 815 IATFTTLMHGLCKEAKISDALH--LKSLMESCG--LKIDVVTYNVLITGLCKIQCVSDAL 870

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +L+ +M+S  LRP+  TYTT+   +    R L+   LL D+   G+VP 
Sbjct: 871 ELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 211/411 (51%), Gaps = 16/411 (3%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L++    E ++V+A      M  CG   + +  NA+++   ++ +      F  E
Sbjct: 156 LVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKE 215

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
            L      +V T  ++++ +C  G L+ A +  +H  K    PN+  YN ++  + K G 
Sbjct: 216 GLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHM-IHKMKSCSLPNVITYNTILHWYVKKGR 274

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
              AM +  +MEK  +  DV+TYNI+I  LC + +   A  LL++M  + +  +  TYN+
Sbjct: 275 FKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNT 334

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI G+  E  M  A+ + ++M  +G++P++ T+++LIDG C+ G ID A+ +  EM +  
Sbjct: 335 LIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAG 394

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           + P  V ++A++     +G++ E   +Y  M +   +P V+T  +L+ GL K G +  A 
Sbjct: 395 VKPSEVTYSAML-----NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAK 449

Query: 455 NF---FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            F    +      D    +       A++  +C  G + +A  L   M + N  PD  TY
Sbjct: 450 EFMSCIVHIPSAIDQKTLN-------ALLLGICNHGSLDEALDLCEKMVTINFIPDIHTY 502

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           T +L G  R  +++  ++LL  M++ G+VPD V    +++G  + G +K+A
Sbjct: 503 TILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAA 553



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/663 (23%), Positives = 279/663 (42%), Gaps = 123/663 (18%)

Query: 4   VLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIAF 62
           +L  AK++  A  L+K +             C +VF++L  ++     NP VF  L+ A+
Sbjct: 113 ILTQAKMHSQAMSLLKHLAMTGFS-------CSAVFSSLLCTISRCDSNPLVFDLLVNAY 165

Query: 63  SEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
            +   + +A   +          +  ACNA+LN L++ G+   VW F +E ++     DV
Sbjct: 166 VKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDV 225

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
            T  ++++  C +G++            KG                       A+ M   
Sbjct: 226 TTCNIVLNSMCIEGNL------------KG-----------------------AKHMIHK 250

Query: 180 MREC----------------------------------GVVPNLYTYNALMDGYCKVADV 205
           M+ C                                  GV  ++YTYN ++D  CK+   
Sbjct: 251 MKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRS 310

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
             A      M   NL P+  T+  L+ G     ++  A + F  M + G+ P++  Y  L
Sbjct: 311 THAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTL 370

Query: 266 IDGHCKAGNL------------------------------FEAMSLCSEMEKFEISPDVF 295
           IDG+C+ G +                               EA S+   MEK+  SPDV+
Sbjct: 371 IDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVY 430

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  L++GLC  G L  A+  +  +       +  T N+L+ G C  G +++AL +C +M
Sbjct: 431 TYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKM 490

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
                 P++ T++ L+ G C+ G I  A+ L   M+ K LVPD+V +T L+ GL K+G +
Sbjct: 491 VTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQV 550

Query: 416 KETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNA-LNFFLEKTDKTDGGYCSPNH 473
           K    L++E++ +  +       +S+++G  K G++    +  +    +K       PN 
Sbjct: 551 KAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKV-----YPNP 605

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  ++      G + ++  L+ DM    ++P N TY  ++ GL +   +   +  L  
Sbjct: 606 ASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDK 665

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSA---FRCSEFL---KESRIGSSETEGHTTRSF 587
           M+  GI PD +   V++  + E   +  A   F C ++L     S+  S+   G   +++
Sbjct: 666 MVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNW 725

Query: 588 LGH 590
           L H
Sbjct: 726 LQH 728


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 256/543 (47%), Gaps = 16/543 (2%)

Query: 31  PHHVCYSVFNALNSLEIPK-FNPSVFSTLI---IAFSEMGHIEEALWVYRKIEVLPAIQA 86
           P H  Y  F+  ++L      N   +S+L+   + +     IE  L   +     P ++A
Sbjct: 72  PQHGLY-FFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEA 130

Query: 87  CNALLNGLIKKGKFD-SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
            N+++    + G  D +V  FY    L      VV    L++C    G V  A  L+D+M
Sbjct: 131 LNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKM 190

Query: 146 I----DKGIEPTVVIYTILI--HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           +    D G++  V  Y+I+I   GLC+  K+ E   +       G VPN+  YN ++DGY
Sbjct: 191 LERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGY 250

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK  D+ RA   + E+      P + T+G L+DG CK G+ +        M   G+  N+
Sbjct: 251 CKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNV 310

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
            V+N +ID   K G + +A  +   M +    PD+ TYNILI   C  G+++ AE  L++
Sbjct: 311 KVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLER 370

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
             +  +L N  +Y  L+  YCK+GD   A  +  ++ E G +P++V++ + I G    G 
Sbjct: 371 AKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGE 430

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           ID A+ +  +M+ K + PD  ++  L+ GL K G       L  EML+  + P  +  ++
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYAT 490

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+ G  +N  +  A   F     K       P  V Y  +I+ LC  G++  A    + M
Sbjct: 491 LVDGFIRNNELDKATELFEVVMSKG----IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKM 546

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
           +  N  PD  T++T++ G ++   +   + +   M+K    P+ V    ++ G+ +  D+
Sbjct: 547 KIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADM 606

Query: 560 KSA 562
             A
Sbjct: 607 SRA 609



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 262/553 (47%), Gaps = 16/553 (2%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNALLNGLI 95
           L  ++   F P++   +++I  ++E G +++A+ ++  +       P + A N+LLN L+
Sbjct: 116 LEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLV 175

Query: 96  KKGKFDSVWEFYEEMVLCG------LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           K GK D   E Y++M+  G      LV D  +  +++   C  G V +   L D+    G
Sbjct: 176 KNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNG 235

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
             P VV Y ++I G C +  +  A  +F  ++  G +P L TY AL+DG+CK        
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +  +EM    L  NV  F  ++D   K G +  A      M + G  P+I  YN LI+  
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS 355

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G + EA       ++  + P+ F+Y  L+   C  G    A  +L K+ + G   ++
Sbjct: 356 CSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDL 415

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           V+Y + I G    G+++ AL V  +M EKGV P+   ++ L+ G CK G   AA  L +E
Sbjct: 416 VSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSE 475

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M+  +L PD  ++  L+DG  ++  + +   L++ ++   I P V   + +I GL K G+
Sbjct: 476 MLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGK 535

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           +++A+++     +K      +P+   ++ +I        +  A K+F  M     +P+  
Sbjct: 536 MTDAVSY----VNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVV 591

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            YT+++ G  +   M     +   M    + P+ V   +++ G+ + G  + A    E +
Sbjct: 592 AYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELM 651

Query: 570 KESRIGSSETEGH 582
             +    ++T  H
Sbjct: 652 LMNNCLPNDTTFH 664



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 251/525 (47%), Gaps = 19/525 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ +I  + + G ++ A  V+ ++++   LP ++   AL++G  K GKF  V +  
Sbjct: 239 NVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLL 298

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM + GL  +V  +  +ID     G V KA  +   M + G EP +  Y ILI+  C+ 
Sbjct: 299 NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSG 358

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ EAE      +E  ++PN ++Y  LM  YCK  D   A +   ++     +P++V++
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G  + G    GE+  A      M + GVFP+  +YN L+ G CK G    A  L SEM  
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + PD + Y  L+ G     +L+ A  L + +  +GI   VV YN +I G CK G M  
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTD 538

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+S  ++M      P+  T S++IDG  K  ++D+A+ ++ +M+ +   P+VV +T+LI+
Sbjct: 539 AVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLIN 598

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K  +M    ++++ M    + P+V T + LI G  K G+   A +FF    +     
Sbjct: 599 GFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFF----ELMLMN 654

Query: 468 YCSPNHVLYAAIIQALC-YDGQILKASK-----------LFSDMRSDNLRPDNCTYTTML 515
            C PN   +  +I  L       L   K            F+ M S+       TY +++
Sbjct: 655 NCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSII 714

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             L +   +    +L   M++ G + D+V    ++ G  + G  K
Sbjct: 715 VCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSK 759



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + +  A ++G +  G+ D      E+M+  G+  D   Y VL+   C +G    A  L
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM+D  ++P   +Y  L+ G    N++ +A  +F  +   G+ P +  YN ++ G CK
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  A+ + ++M   N  P+  T   ++DG  K  +L +A   F  M K    PN+  
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVA 592

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI+G CK  ++  A  +   M+ F + P+V TY ILI G    G+ E A    + M 
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELML 652

Query: 322 KEGILANVVTYNSLIDGYC------------KEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
               L N  T++ LI+G              +E D    L   + M  +G    + T++S
Sbjct: 653 MNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNS 712

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +I   CK G +D A  L T+M+ K  + D V F+AL+ GL + G  KE
Sbjct: 713 IIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKE 760



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 50/338 (14%)

Query: 66  GHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
           G I+ AL V  K+    V P  Q  N L++GL KKG+F +      EM+   L  D   Y
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMY 488

Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
             L+D      ++ KA  LF+ ++ KGI+P VV Y ++I GLC   KM +A S    M+ 
Sbjct: 489 ATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKI 548

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
               P+ YT++ ++DGY K  D++ AL+ + +M+    +PNVV +  L++G CK+ ++  
Sbjct: 549 ANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSR 608

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM----------------- 285
           A   F  M  F + PN+  Y  LI G  K G   +A S    M                 
Sbjct: 609 AEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLIN 668

Query: 286 ------------EKFE------------------ISPDVFTYNILIKGLCGVGQLEGAEG 315
                       EK E                   S  + TYN +I  LC  G ++ A+ 
Sbjct: 669 GLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQL 728

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           L  KM ++G L + V +++L+ G C+ G  ++  ++ S
Sbjct: 729 LQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIIS 766


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 236/466 (50%), Gaps = 20/466 (4%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           S+FN+L   + P      F+ ++ +  +  H    L + +++E   + P     N L+N 
Sbjct: 54  SLFNSLLH-QNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINC 112

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             + G     +    +++  G   D++T    I   C +G + +ALN  D+++  G    
Sbjct: 113 FCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLD 172

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  LI+GLC   +   A  + R +    V  N   YN ++DG  K   VN A + Y 
Sbjct: 173 QVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYS 232

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM+   + P+VVT+  L+ G   VG+L+ A + F  M    + P+++ +N L+DG CK G
Sbjct: 233 EMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEG 292

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L +A ++   M   +I P+V T+N L+ G C   +++  + +   M K+GI  NVVTY 
Sbjct: 293 RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYC 352

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           SL+DGYC    + KA  + + M+++GV  NV +++ +I+G CK   +D AM L+ EM  K
Sbjct: 353 SLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHK 412

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            ++PDVV + +LIDGL K G +    +L  EM +    P++ T +S+++ L         
Sbjct: 413 HIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL-------- 464

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                  T   D G   PN      +I+ LC  G++  A K+F D+
Sbjct: 465 -------TKLKDQG-IQPNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 230/430 (53%), Gaps = 16/430 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
            L+L  +M  +GI P  V + ILI+  C    +  A S+   + + G  P++ T N  + 
Sbjct: 87  VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G+C    +++AL F+ +++      + V++G L++GLCKVGE RAA      +    V  
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N  +YN +IDG  K  ++ +A  L SEM    ISPDV TY+ LI+G   VG+L+ A  L 
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            KM  E I  +V T+N L+DG+CKEG ++KA +V   M  + ++PNV TF++L+DG CK 
Sbjct: 267 NKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD 326

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
             +     ++  M+ + + P+VV + +L+DG      + +  +++  M +  +T +V + 
Sbjct: 327 RKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSY 386

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + +I+G  K  ++  A+  F+E   K    +  P+ V Y ++I  LC  G+I  A +L +
Sbjct: 387 NIMINGFCKIKKVDKAMKLFIEMHHK----HIIPDVVTYNSLIDGLCKSGKISYAFQLVN 442

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M      P+  TY ++L  LL   +              GI P+   + ++++G  ++G
Sbjct: 443 EMHDRGQPPNIITYNSILNALLTKLK------------DQGIQPNMHTDTILIKGLCQSG 490

Query: 558 DLKSAFRCSE 567
            L++A +  E
Sbjct: 491 KLEAARKVFE 500



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 212/433 (48%), Gaps = 67/433 (15%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEALWVYRKIEVL 81
           +L+KS+  H    +V +    +E    NP+   F+ LI  F ++G I  A  V  KI  +
Sbjct: 77  SLVKSKHYH----TVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKM 132

Query: 82  ---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
              P I   N  + G   KG+      F++++V  G   D V+YG LI+  C  G+   A
Sbjct: 133 GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 192

Query: 139 L-----------------------------------NLFDEMIDKGIEPTVVIYTILIHG 163
           L                                   +L+ EM+ K I P VV Y+ LI G
Sbjct: 193 LQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRG 252

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                K+ +A  +F  M    + P++YT+N L+DG+CK   + +A      M+  +++PN
Sbjct: 253 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPN 312

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V TF  L+DG CK  +++     F  M K G+ PN+  Y  L+DG+C    + +A  + +
Sbjct: 313 VSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFN 372

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M +  ++ +V +YNI+I G C + +++ A  L  +M+ + I+ +VVTYNSLIDG CK G
Sbjct: 373 TMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSG 432

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSS-----------------------LIDGQCKAGNI 380
            +  A  + ++M ++G  PN++T++S                       LI G C++G +
Sbjct: 433 KISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKL 492

Query: 381 DAAMGLYTEMVIK 393
           +AA  ++ ++++K
Sbjct: 493 EAARKVFEDLLVK 505



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 196/399 (49%), Gaps = 4/399 (1%)

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           + N +  A S+F S+         + +N ++    K    +  L    +M    + PN V
Sbjct: 45  HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFV 104

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           TF +L++  C++G +  A +    + K G  P+I   N  I G C  G + +A++   ++
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                  D  +Y  LI GLC VG+   A  LL+++  + +  N V YN++IDG  K+  +
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
             A  + S+M  K + P+VVT+S+LI G    G +  A+ L+ +M+++++ PDV  F  L
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           +DG  K+G +K+   +   M+   I P+V T ++L+ G  K+ ++      F     +  
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG- 343

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                PN V Y +++   C   Q+ KA K+F+ M    +  +  +Y  M+ G  + K++ 
Sbjct: 344 ---IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD 400

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             M L  +M    I+PD V    ++ G  ++G +  AF+
Sbjct: 401 KAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQ 439



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 202/411 (49%), Gaps = 4/411 (0%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           DV  A++LF+ ++ +    T   +  ++  L          S+ + M   G+ PN  T+N
Sbjct: 48  DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L++ +C++  +  A     ++L    +P+++T    + G C  G++  A NF   +   
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G   +   Y  LI+G CK G    A+ L   ++   +  +   YN +I G+     +  A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L  +M  + I  +VVTY++LI G+   G ++ A+ + ++M  + ++P+V TF+ L+DG
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +  A  +   M+I+ + P+V  F  L+DG  KD  MKE   ++  M++  I P+
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T  SL+ G     +++ A   F   + +   G  +  H  Y  +I   C   ++ KA 
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQR---GVTANVHS-YNIMINGFCKIKKVDKAM 403

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           KLF +M   ++ PD  TY +++ GL ++ ++     L+ +M   G  P+ +
Sbjct: 404 KLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNII 454


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 246/522 (47%), Gaps = 36/522 (6%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           EI   N   +ST++        +E+A+   R  E   + P++ + N++++G  K G  D 
Sbjct: 181 EIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM 240

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              F+  ++ CGLV  V ++ +LI+  C  G + +AL L  +M   G+EP  V Y IL  
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G      +  A  + R M + G+ P++ TY  L+ G C++ +++  L    +ML    + 
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360

Query: 223 N-VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           N ++   V++ GLCK G +  A + F  M   G+ P++  Y+ +I G CK G    A+ L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P+  T+  L+ GLC  G L  A  LL  +   G   ++V YN +IDGY K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+AL +   + E G+ P+V TF+SLI G CK  NI  A  +   + +  L P VV 
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+D  +  GN K    L +EM    I P+  T S +  GL +  +  N         
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC-------- 592

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                     NHVL   I +         K  +   DM S+ + PD  TY T+++ L R 
Sbjct: 593 ----------NHVLRERIFE---------KCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633

Query: 522 KRMLDVMMLLADMIKMGIVPDA-----VINQVMVRGYQENGD 558
           K +    + L  M    +   +     +I+ + V GY    D
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 56/489 (11%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           K  +++ E+ DK  E T   Y+ ++ GLC + K+ +A    R+     + P++ ++N++M
Sbjct: 174 KMWDVYKEIKDKN-EHT---YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYCK+  V+ A  F+  +L   L P+V +  +L++GLC VG +  A      M K GV 
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN L  G    G +  A  +  +M    +SPDV TY IL+ G C +G ++    L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349

Query: 317 LQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M   G  L +++  + ++ G CK G +++ALS+ +QM   G+ P++V +S +I G C
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409

Query: 376 KAGNIDAAMGLYTEMVIKSLVP-----------------------------------DVV 400
           K G  D A+ LY EM  K ++P                                   D+V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++  +IDG +K G ++E L L+K ++E  ITPSV T +SLI+G  K   I+ A       
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--- 526

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-- 518
            D       +P+ V Y  ++ A    G      +L  +M+++ + P N TY+ + +GL  
Sbjct: 527 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585

Query: 519 ----------LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
                     LR +        L DM   GI PD +    +++       L  AF   E 
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645

Query: 569 LKESRIGSS 577
           +K   + +S
Sbjct: 646 MKSRNLDAS 654



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 260/518 (50%), Gaps = 39/518 (7%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +I  F  S FSTL+++     H+      +++++V+        L   L ++G F   WE
Sbjct: 76  DIYAFRHSSFSTLLVS-----HVLAGQRRFKELQVI--------LEQLLQEEGTFRK-WE 121

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
                   GLV D++ +            V  +L +  +M D+ +  +   Y  +++   
Sbjct: 122 S------TGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +KM +   +++ +++     N +TY+ ++DG C+   +  A+ F       ++ P+VV
Sbjct: 171 ETDKMWD---VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           +F  +M G CK+G +  A +FF  + K G+ P+++ +N LI+G C  G++ EA+ L S+M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  + PD  TYNIL KG   +G + GA  +++ M  +G+  +V+TY  L+ G C+ G++
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343

Query: 346 EKALSVCSQMTEKGVEPN-VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  L +   M  +G E N ++  S ++ G CK G ID A+ L+ +M    L PD+V ++ 
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I GL K G     L LY EM + +I P+  T  +L+ GL + G +  A +      D  
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL----DSL 459

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                + + VLY  +I      G I +A +LF  +    + P   T+ +++ G  + + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 525 LDVMMLLADMIKM-GIVPDAVINQVMVRGYQENGDLKS 561
            +   +L D+IK+ G+ P  V    ++  Y   G+ KS
Sbjct: 520 AEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 214/432 (49%), Gaps = 14/432 (3%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE-SMFRSMRECGVVPNLYTYNALMDGY 199
           L +E   +  E T +++ +L+  L +  +MV+    + + M++  +  +  +YN+++  +
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLF-LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
               + ++  + Y E+   N      T+  ++DGLC+  +L  A  F        + P++
Sbjct: 170 ---RETDKMWDVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N ++ G+CK G +  A S    + K  + P V+++NILI GLC VG +  A  L   
Sbjct: 223 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 282

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K G+  + VTYN L  G+   G +  A  V   M +KG+ P+V+T++ L+ GQC+ GN
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342

Query: 380 IDAAMGLYTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ID  + L  +M+ +   +  ++  + ++ GL K G + E L L+ +M    ++P +   S
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            +IHGL K G+   AL  + E  DK       PN   + A++  LC  G +L+A  L   
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKR----ILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           + S     D   Y  ++ G  ++  + + + L   +I+ GI P       ++ GY +  +
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518

Query: 559 LKSAFRCSEFLK 570
           +  A +  + +K
Sbjct: 519 IAEARKILDVIK 530



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 194/413 (46%), Gaps = 18/413 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSV 103
            +P V  ++ L+    ++G+I+  L + + +      L +I  C+ +L+GL K G+ D  
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + +M   GL  D+V Y ++I   C  G    AL L+DEM DK I P    +  L+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC +  ++EA S+  S+   G   ++  YN ++DGY K   +  ALE +  ++   + P+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V TF  L+ G CK   +  A      +  +G+ P++  Y  L+D +   GN      L  
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK------------MYKEGILANVVT 331
           EM+   I P   TY+++ KGLC   + E    +L++            M  EGI  + +T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++I   C+   +  A      M  + ++ +  T++ LID  C  G I  A      + 
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +++      +T LI      G+ +  ++L+ ++L      S+   S++I+ L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 15/371 (4%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S ++    + G I+EAL ++ +++   + P + A + +++GL K GKFD     Y+EM  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             ++ +  T+G L+   C +G +++A +L D +I  G    +V+Y I+I G      + E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F+ + E G+ P++ T+N+L+ GYCK  ++  A +    +  + L P+VV++  LMD
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-----------NLFEAMSL 281
                G  ++       M   G+ P    Y+ +  G C+              +FE    
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 282 -CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
              +ME   I PD  TYN +I+ LC V  L GA   L+ M    + A+  TYN LID  C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G + KA S    + E+ V  +   +++LI   C  G+ + A+ L+ +++ +     + 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 401 VFTALIDGLSK 411
            ++A+I+ L +
Sbjct: 727 DYSAVINRLCR 737



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  +YKE    N  TY++++DG C++  +E A+        K + P+VV+F+S++ G CK
Sbjct: 175 MWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 234

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   +  ++   LVP V     LI+GL   G++ E L L  +M +  + P   T
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY-------------------- 476
            + L  G    G IS A     +  DK      SP+ + Y                    
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKG----LSPDVITYTILLCGQCQLGNIDMGLVLL 350

Query: 477 ----------------AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                           + ++  LC  G+I +A  LF+ M++D L PD   Y+ ++ GL +
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             +    + L  +M    I+P++  +  ++ G  + G L  A      L +S I S ET
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGET 465


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 158/513 (30%), Positives = 254/513 (49%), Gaps = 14/513 (2%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           +EEAL +Y ++    + P +    ++L GL K GK         EM   G+  + V+Y +
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L+D     G V +AL     MI +G    V+  T+LI GL    ++ EAE +F ++ +  
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           +VPN  TY+AL+DG CK+ D+N A    HEM   +  PNV+T+  L++G  K G L  A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M      PNI  Y  L+DG  KAG    A+ L S+M++  +  +VF  +  +  +
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G++E AE L+ KM   G+  ++V Y +L+DG+ K G +  AL++  +MT K V  ++
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VTF+ LI+   K G  D    +Y+ M    L PD+  +  +++G  K GN    L L+ E
Sbjct: 305 VTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M   K+ P+  T + +I+GL + GR+ NA++   E      G Y  P    Y  ++    
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMV--LMGLY--PTSTTYRILLNISS 419

Query: 485 YDGQ---ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
              +   IL+  +L  +M+   L+ D   Y  ++  L +         +L DM + GI+ 
Sbjct: 420 KSRRADTILQTHELLVNMQ---LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIA 476

Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           D      ++ GY  +  LK AF     +   R+
Sbjct: 477 DTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 509



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 218/419 (52%), Gaps = 5/419 (1%)

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           Q  + +AL L++EM+  GI P VV +  +++GLC   K+ E + + R M + G+  N  +
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           Y  L+D   K   V  AL     M+      +V+   VL+DGL K G+++ A   F ++ 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           +  + PN   Y+ LIDG CK G++  A S   EME+ +  P+V TY+ LI G    G L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A  +L+KM  +  + N+ TY  L+DG  K G  + AL + S+M + G++ NV    + +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +   ++G ++ A  L  +M    L PD+V +T L+DG  K G +   L L +EM    + 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
             + T + LI+ LFK G+ S+  + +    +       SP+   Y  ++      G    
Sbjct: 302 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMG----LSPDLATYNTMLNGNFKKGNWTS 356

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           A +L+++M+S  L P+  T   M+ GL  A RM + + +L +M+ MG+ P +   ++++
Sbjct: 357 ALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 415



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 255/551 (46%), Gaps = 43/551 (7%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEF 106
            N   ++ L+ A  + G + EAL     + V      + AC  L++GL K G+       
Sbjct: 57  LNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYL 116

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +  +    LV + +TY  LID  C  GD+  A +   EM +K   P V+ Y+ LI+G   
Sbjct: 117 FCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVK 176

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           +  + +A  + R M     +PN+ TY  L+DG  K    + AL+ Y +M    L+ NV  
Sbjct: 177 QGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFI 236

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
               ++ + + G +  A      MA  G+ P++  Y  L+DG  K+G +  A++L  EM 
Sbjct: 237 LDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMT 296

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +  D+ T+N+LI  L  +G+ +  E +   M + G+  ++ TYN++++G  K+G+  
Sbjct: 297 SKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 355

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP--------- 397
            AL + ++M  + + PN +T + +I+G C+AG ++ A+ +  EMV+  L P         
Sbjct: 356 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 415

Query: 398 --------------------------DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                                     D  V+  LI  L K G  ++   + K+M E  I 
Sbjct: 416 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 475

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T ++LIHG   +  +  A  F    T  ++    SP+   Y  ++  L   G I +
Sbjct: 476 ADTTTYNALIHGYCISSHLKRA--FMTYSTMLSE--RVSPDIETYNLLLGGLSKAGLIHE 531

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L S+++   L P+ CTY T++ G  + +   + + +  +M+  G +P      +++ 
Sbjct: 532 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG 591

Query: 552 GYQENGDLKSA 562
            + + G +K A
Sbjct: 592 YFSKMGKMKQA 602



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 216/460 (46%), Gaps = 15/460 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +A +N + + G+ +   E   +M   GL  D+V Y  L+D     G V  ALNL  EM  
Sbjct: 238 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 297

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K +   +V + +LI+ L    K  + ES++ +MRE G+ P+L TYN +++G  K  +   
Sbjct: 298 KNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS 356

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           ALE ++EM    L PN +T  ++++GLC+ G +  A +    M   G++P    Y  L++
Sbjct: 357 ALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 416

Query: 268 GHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
              K   A  + +   L   M+  ++  DV  YNILI  LC +G    A  +L+ M + G
Sbjct: 417 ISSKSRRADTILQTHELLVNMQ-LKVDKDV--YNILISNLCKLGMTRKATAVLKDMEERG 473

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I+A+  TYN+LI GYC    +++A    S M  + V P++ T++ L+ G  KAG I  A 
Sbjct: 474 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 533

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L +E+  + LVP+   +  L+ G  K  N KE LR+Y EM+     P     + LI   
Sbjct: 534 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 593

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD--GQILK------ASKLF 496
            K G++  A     E   K     C+   +L       L     G  LK      A +LF
Sbjct: 594 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLF 653

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            +M      P   T   +        +  D  MLL    K
Sbjct: 654 IEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYK 693


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 226/481 (46%), Gaps = 5/481 (1%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           A +    ++    + GK         EM   GLV        +ID     G V  A  +F
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVF 216

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
           DEM+D+ + P    Y +++ G C   ++ + +   + M E G   +  T   ++  + + 
Sbjct: 217 DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
             VNRA  ++ + +   L PN++ F  L++GLCK+G ++ A      M + G  PN++ +
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTH 336

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
             LIDG CK G   +A  L  ++ + +   P+V+TY  +I G C   +L  AE LL +M 
Sbjct: 337 TALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK 396

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++G++ N  TY  LIDG+CK G+  +A  +   M ++G  PN+ T++++IDG CK G   
Sbjct: 397 EQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFP 456

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L    +   L  D V +T LI    +  + K+ L ++  M +  + P + T + LI
Sbjct: 457 EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLI 516

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
               +  ++  +   F E      G    P    Y ++I   C DG I  A K F  MR 
Sbjct: 517 ATFCRQKKVEESEKLFEEAV----GLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRD 572

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
              +PD+ TY  ++ GL    ++ +   L   MI  G+ P  V    +   Y + GD  +
Sbjct: 573 YGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSAT 632

Query: 562 A 562
           A
Sbjct: 633 A 633



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/410 (33%), Positives = 206/410 (50%), Gaps = 7/410 (1%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           +I  FSE G +  A W ++K   +   P +   ++L+NGL K G     +E  EEMV  G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEA 173
              +V T+  LID  C +G   KA  LF +++     +P V  YT +I+G C E K+  A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E +   M+E G+VPN  TY  L+DG+CK  +  RA E    M      PN+ T+  ++DG
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCK G    A        K G+  +   Y  LI   C+  +  +A+++ S M K  + PD
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + TYN+LI   C   ++E +E L ++    G+L    TY S+I GYC++G +  A+    
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M + G +P+ +T+ +LI G C    +D A  LY  M+   L P  V    L     K G
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +   T  +  E LE K+   + TV++LI  L    ++  A  FF +  DK
Sbjct: 629 D-SATAMIILERLEKKLW--IRTVNTLIRKLCSEKKVGVAALFFHKLLDK 675



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 210/409 (51%), Gaps = 5/409 (1%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P   +   ++ G  + G+   V  + ++M+  G   D  T  ++I     +G V +A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
             F + +  G+ P ++ ++ LI+GLC    + +A  M   M   G  PN+YT+ AL+DG 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 200 CKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           CK     +A   + +++   N +PNV T+  +++G CK  +L  A    + M + G+ PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              Y CLIDGHCKAGN   A  L   M K   +P++FTYN +I GLC  G+   A  LL+
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +  K G+ A+ VTY  LI  +C++ D ++AL++ S+M + G++P++ T++ LI   C+  
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            ++ +  L+ E V   L+P    +T++I G  +DG++   ++ + +M +    P   T  
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           +LI GL    ++  A   +    D       SP  V    +    C  G
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNG----LSPCEVTRVTLAYEYCKQG 628



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 211/459 (45%), Gaps = 9/459 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G + +A+N+  EM + G+     I   +I        +  AE +F  M +  VVP+  +Y
Sbjct: 172 GKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSY 231

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++ GYC++  ++    +  +M+      +  T  +++    + G +  A  +F    +
Sbjct: 232 KLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQ 291

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+ PN+  ++ LI+G CK G++ +A  +  EM +    P+V+T+  LI GLC  G  E 
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 313 AEGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L  K+ + +    NV TY  +I+GYCKE  + +A  +  +M E+G+ PN  T++ LI
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CKAGN   A  L   M  +   P++  + A+IDGL K G   E  +L +  L++ + 
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T + LI    +      AL  F     +       P+   Y  +I   C   ++ +
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIF----SRMFKVGLQPDMHTYNVLIATFCRQKKVEE 527

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + KLF +     L P   TYT+M+ G  R   +   +     M   G  PD++    ++ 
Sbjct: 528 SEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALIS 587

Query: 552 GYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
           G      L  A +    L E+ I +  +    TR  L +
Sbjct: 588 GLCNESKLDEACQ----LYETMIDNGLSPCEVTRVTLAY 622



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 14/389 (3%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNR-----ALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           +E G V +L  +N ++ G+ K     R     A  F +   + NL         ++    
Sbjct: 114 QEAGSVVSLSFFNWVI-GFSKFRHFMRLYIVCATTFLN---NDNLDRATEVMQCMVRSFS 169

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           ++G+L+ A N  + M   G+     + N +ID     G +  A  +  EM    + PD  
Sbjct: 170 EIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDST 229

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +Y +++ G C +G++   +  L+ M + G   +  T   +I  + ++G + +A     + 
Sbjct: 230 SYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKW 289

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + G+ PN++ FSSLI+G CK G+I  A  +  EMV K   P+V   TALIDGL K G  
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349

Query: 416 KETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           ++  RL+ +++ +    P+V+T + +I+G  K  +++ A    +   ++       PN  
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG----LVPNTN 405

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I   C  G   +A +L   M  +   P+  TY  ++ GL +  R  +   LL   
Sbjct: 406 TYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRG 465

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +K G+  D V   +++  +    D K A 
Sbjct: 466 LKSGLHADKVTYTILISEFCRQTDNKQAL 494


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/404 (34%), Positives = 216/404 (53%), Gaps = 5/404 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D+V +F   ++L      ++ +G ++           A++L  +M  KGIEP +V   IL
Sbjct: 48  DTVSQF-NRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  +M  + S+   + + G  P+  T N LM G C   +V R+L F+ +++    
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           Q N V++G L++GLCK+GE R A      +      P++ +Y+ +IDG CK   + +A  
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             SEM    I P+V TY+ LI G C  GQL GA  LL +M  + I  NV TYN LID  C
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A  + ++M  KG   +VVT++S++DG CK+ N+D A  L+ +M    + P+  
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +TALIDGL K G +K   +L++ +L       V T + +I GL K G    AL     K
Sbjct: 347 TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAM---K 403

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           +   D G C PN V +  II++L    +  KA KL   M +  L
Sbjct: 404 SKMEDNG-CIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 202/365 (55%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I     +L  L+K   + +      +M + G+  ++VT  +LI+C C  G +  + ++
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P  +    L+ GLC + ++  +      +   G   N  +Y  L++G CK
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   A++    +   + +P+VV +  ++DGLCK   +  A +FF  M   G+FPN+  
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G C AG L  A SL +EM    I+P+V+TYNILI  LC  G+++ A+ LL +M+
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMH 302

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G  A+VVTYNS++DG CK  +++KA ++  +M + G++PN  T+++LIDG CK G + 
Sbjct: 303 HKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLK 362

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+  +++K    DV  +  +I GL K+G   + L +  +M +    P+  T   +I
Sbjct: 363 NAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIII 422

Query: 442 HGLFK 446
             LF+
Sbjct: 423 RSLFE 427



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 191/358 (53%), Gaps = 5/358 (1%)

Query: 44  SLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+    P++   + LI  F  +G +  +  V  KI  L   P     N L+ GL  KG
Sbjct: 90  QMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 149

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +      F++++V  G   + V+YG L++  C  G+   A+ L   + D+   P VV+Y+
Sbjct: 150 EVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYS 209

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +I GLC +  + +A   F  M   G+ PN+ TY+ L+ G+C    +  A    +EM+  
Sbjct: 210 TIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILK 269

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ PNV T+ +L+D LCK G+++ A      M   G   ++  YN ++DG CK+ NL +A
Sbjct: 270 NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKA 329

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            +L  +M+K+ I P+ +TY  LI GLC  G+L+ A+ L Q +  +G   +V TYN +I G
Sbjct: 330 TALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISG 389

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            CKEG  +KAL++ S+M + G  PN VTF  +I    +    D A  L   M+ K L+
Sbjct: 390 LCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 6/383 (1%)

Query: 40  NALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGL 94
           +  N L + +  P +  F  ++    +M H   A+ + R++EV    P +   N L+N  
Sbjct: 51  SQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCF 110

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
              G+    +    +++  G   D +T   L+   C +G+V ++L+  D+++ +G +   
Sbjct: 111 CHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQ 170

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V Y  L++GLC   +   A  + R + +    P++  Y+ ++DG CK   VN+A +F+ E
Sbjct: 171 VSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSE 230

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    + PNV+T+  L+ G C  G+L  A +    M    + PN++ YN LID  CK G 
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGK 290

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA  L +EM       DV TYN ++ GLC    L+ A  L  KM K GI  N  TY +
Sbjct: 291 VKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTA 350

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG CK G ++ A  +   +  KG   +V T++ +I G CK G  D A+ + ++M    
Sbjct: 351 LIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNG 410

Query: 395 LVPDVVVFTALIDGL-SKDGNMK 416
            +P+ V F  +I  L  KD N K
Sbjct: 411 CIPNAVTFDIIIRSLFEKDENDK 433



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 187/392 (47%), Gaps = 4/392 (1%)

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           EN + +  S F  +      P +  +  ++    K+     A+    +M    ++PN+VT
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             +L++  C +G++  + +    + K G  P+    N L+ G C  G +  ++    ++ 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 +  +Y  L+ GLC +G+   A  LL+ +       +VV Y+++IDG CK+  + 
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A    S+M  +G+ PNV+T+S+LI G C AG +  A  L  EM++K++ P+V  +  LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L K+G +KE  +L  EM        V T +S++ GL K+  +  A   F+    K   
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFM----KMKK 338

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y A+I  LC  G++  A KLF  +       D  TY  M+ GL +      
Sbjct: 339 WGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDK 398

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            + + + M   G +P+AV   +++R   E  +
Sbjct: 399 ALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDE 430



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 172/362 (47%), Gaps = 11/362 (3%)

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V+  NR L   H        P ++ FG ++  L K+     A +    M   G+ PN+  
Sbjct: 50  VSQFNRLLLVRHT-------PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
            N LI+  C  G +  + S+  ++ K    PD  T N L+KGLC  G+++ +     K+ 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G   N V+Y +L++G CK G+   A+ +   + ++   P+VV +S++IDG CK   ++
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A   ++EM  + + P+V+ ++ LI G    G +     L  EM+   I P+V+T + LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K G++  A     E   K        + V Y +++  LC    + KA+ LF  M+ 
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQ----PADVVTYNSVLDGLCKSQNLDKATALFMKMKK 338

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
             ++P+  TYT ++ GL +  R+ +   L   ++  G   D     VM+ G  + G    
Sbjct: 339 WGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDK 398

Query: 562 AF 563
           A 
Sbjct: 399 AL 400



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 155/292 (53%), Gaps = 4/292 (1%)

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A+SL  +ME   I P++ T NILI   C +GQ+  +  +L K+ K G   + +T N+L+ 
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 143

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           G C +G+++++L    ++  +G + N V++ +L++G CK G    A+ L   +  +S  P
Sbjct: 144 GLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           DVV+++ +IDGL KD  + +    + EM    I P+V T S+LI G    G++  A +  
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E   K      +PN   Y  +I ALC +G++ +A KL ++M       D  TY ++L G
Sbjct: 264 NEMILKN----INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDG 319

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           L +++ +     L   M K GI P+      ++ G  + G LK+A +  + L
Sbjct: 320 LCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHL 371


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 246/522 (47%), Gaps = 36/522 (6%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           EI   N   +ST++        +E+A+   R  E   + P++ + N++++G  K G  D 
Sbjct: 181 EIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM 240

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              F+  ++ CGLV  V ++ +LI+  C  G + +AL L  +M   G+EP  V Y IL  
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G      +  A  + R M + G+ P++ TY  L+ G C++ +++  L    +ML    + 
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360

Query: 223 N-VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           N ++   V++ GLCK G +  A + F  M   G+ P++  Y+ +I G CK G    A+ L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P+  T+  L+ GLC  G L  A  LL  +   G   ++V YN +IDGY K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+AL +   + E G+ P+V TF+SLI G CK  NI  A  +   + +  L P VV 
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+D  +  GN K    L +EM    I P+  T S +  GL +  +  N         
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC-------- 592

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                     NHVL   I +         K  +   DM S+ + PD  TY T+++ L R 
Sbjct: 593 ----------NHVLRERIFE---------KCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633

Query: 522 KRMLDVMMLLADMIKMGIVPDA-----VINQVMVRGYQENGD 558
           K +    + L  M    +   +     +I+ + V GY    D
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 56/489 (11%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           K  +++ E+ DK  E T   Y+ ++ GLC + K+ +A    R+     + P++ ++N++M
Sbjct: 174 KMWDVYKEIKDKN-EHT---YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYCK+  V+ A  F+  +L   L P+V +  +L++GLC VG +  A      M K GV 
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN L  G    G +  A  +  +M    +SPDV TY IL+ G C +G ++    L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349

Query: 317 LQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M   G  L +++  + ++ G CK G +++ALS+ +QM   G+ P++V +S +I G C
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409

Query: 376 KAGNIDAAMGLYTEMVIKSLVP-----------------------------------DVV 400
           K G  D A+ LY EM  K ++P                                   D+V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++  +IDG +K G ++E L L+K ++E  ITPSV T +SLI+G  K   I+ A       
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--- 526

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-- 518
            D       +P+ V Y  ++ A    G      +L  +M+++ + P N TY+ + +GL  
Sbjct: 527 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585

Query: 519 ----------LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
                     LR +        L DM   GI PD +    +++       L  AF   E 
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645

Query: 569 LKESRIGSS 577
           +K   + +S
Sbjct: 646 MKSRNLDAS 654



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 260/518 (50%), Gaps = 39/518 (7%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           +I  F  S FSTL+++     H+      +++++V+        L   L ++G F   WE
Sbjct: 76  DIYAFRHSSFSTLLVS-----HVLAGQRRFKELQVI--------LEQLLQEEGTFRK-WE 121

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
                   GLV D++ +            V  +L +  +M D+ +  +   Y  +++   
Sbjct: 122 S------TGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             +KM +   +++ +++     N +TY+ ++DG C+   +  A+ F       ++ P+VV
Sbjct: 171 ETDKMWD---VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           +F  +M G CK+G +  A +FF  + K G+ P+++ +N LI+G C  G++ EA+ L S+M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            K  + PD  TYNIL KG   +G + GA  +++ M  +G+  +V+TY  L+ G C+ G++
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343

Query: 346 EKALSVCSQMTEKGVEPN-VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  L +   M  +G E N ++  S ++ G CK G ID A+ L+ +M    L PD+V ++ 
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +I GL K G     L LY EM + +I P+  T  +L+ GL + G +  A +      D  
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL----DSL 459

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
                + + VLY  +I      G I +A +LF  +    + P   T+ +++ G  + + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 525 LDVMMLLADMIKM-GIVPDAVINQVMVRGYQENGDLKS 561
            +   +L D+IK+ G+ P  V    ++  Y   G+ KS
Sbjct: 520 AEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 211/422 (50%), Gaps = 14/422 (3%)

Query: 151 EPTVVIYTILIHGLCNENKMVE-AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           E T +++ +L+  L +  +MV+ +  + + M++  +  +  +YN+++  +    + ++  
Sbjct: 121 ESTGLVWDMLLF-LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMW 176

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + Y E+   N      T+  ++DGLC+  +L  A  F        + P++  +N ++ G+
Sbjct: 177 DVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G +  A S    + K  + P V+++NILI GLC VG +  A  L   M K G+  + 
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VTYN L  G+   G +  A  V   M +KG+ P+V+T++ L+ GQC+ GNID  + L  +
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352

Query: 390 MVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           M+ +   +  ++  + ++ GL K G + E L L+ +M    ++P +   S +IHGL K G
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           +   AL  + E  DK       PN   + A++  LC  G +L+A  L   + S     D 
Sbjct: 413 KFDMALWLYDEMCDKR----ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
             Y  ++ G  ++  + + + L   +I+ GI P       ++ GY +  ++  A +  + 
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528

Query: 569 LK 570
           +K
Sbjct: 529 IK 530



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 194/413 (46%), Gaps = 18/413 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSV 103
            +P V  ++ L+    ++G+I+  L + + +      L +I  C+ +L+GL K G+ D  
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
              + +M   GL  D+V Y ++I   C  G    AL L+DEM DK I P    +  L+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC +  ++EA S+  S+   G   ++  YN ++DGY K   +  ALE +  ++   + P+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V TF  L+ G CK   +  A      +  +G+ P++  Y  L+D +   GN      L  
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK------------MYKEGILANVVT 331
           EM+   I P   TY+++ KGLC   + E    +L++            M  EGI  + +T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           YN++I   C+   +  A      M  + ++ +  T++ LID  C  G I  A      + 
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +++      +T LI      G+ +  ++L+ ++L      S+   S++I+ L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 15/371 (4%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S ++    + G I+EAL ++ +++   + P + A + +++GL K GKFD     Y+EM  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             ++ +  T+G L+   C +G +++A +L D +I  G    +V+Y I+I G      + E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F+ + E G+ P++ T+N+L+ GYCK  ++  A +    +  + L P+VV++  LMD
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-----------NLFEAMSL 281
                G  ++       M   G+ P    Y+ +  G C+              +FE    
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 282 -CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
              +ME   I PD  TYN +I+ LC V  L GA   L+ M    + A+  TYN LID  C
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G + KA S    + E+ V  +   +++LI   C  G+ + A+ L+ +++ +     + 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 401 VFTALIDGLSK 411
            ++A+I+ L +
Sbjct: 727 DYSAVINRLCR 737



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  +YKE    N  TY++++DG C++  +E A+        K + P+VV+F+S++ G CK
Sbjct: 175 MWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 234

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   +  ++   LVP V     LI+GL   G++ E L L  +M +  + P   T
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY-------------------- 476
            + L  G    G IS A     +  DK      SP+ + Y                    
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKG----LSPDVITYTILLCGQCQLGNIDMGLVLL 350

Query: 477 ----------------AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                           + ++  LC  G+I +A  LF+ M++D L PD   Y+ ++ GL +
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             +    + L  +M    I+P++  +  ++ G  + G L  A      L +S I S ET
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGET 465


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 244/541 (45%), Gaps = 75/541 (13%)

Query: 49  KFNPSVFSTLIIA--FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           +  P+ F+  + A     +G   +AL + R +     +P       +++ L+ +G     
Sbjct: 172 RVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 231

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               +EM+L G  ADV T+  L+   CG G V +A  L D M+ +G  P+VV Y  L+ G
Sbjct: 232 AMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQG 291

Query: 164 LC-------------------------------NENKMVEAESMFRSMRECGVVPNLYTY 192
           LC                                E K+  A  ++  M   G  P+++TY
Sbjct: 292 LCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTY 351

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           + LM G CK+     A+    EM      PN+VT+  L+   C+ G    A      M  
Sbjct: 352 SILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLA 411

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G   N   YN +I   CK G L +A  L  EM+     PD+ TYN +I  LC    +E 
Sbjct: 412 KGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEE 471

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           AE + + + +EG++AN +TYN+LI    + G  ++ L + S+M   G + +V++++ LI 
Sbjct: 472 AEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIK 531

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK GN+D +M L  EMV K + P+   +  LI+ L K G +++ L L KEML   +TP
Sbjct: 532 ALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 591

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            + T ++LI+GL K G    ALN  LEK          PN                    
Sbjct: 592 DIVTYNTLINGLCKVGWTHAALN-LLEKL---------PN-------------------- 621

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
                    +N+ PD  TY  ++    + + + D  MLL   I  GIVP+     +MV+ 
Sbjct: 622 ---------ENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQN 672

Query: 553 Y 553
           +
Sbjct: 673 F 673



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 232/501 (46%), Gaps = 12/501 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  V P+ ++ N +L+ L +          Y  M+   +     T+GV     C  G  
Sbjct: 134 RRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 193

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             AL L   M   G  P  V+Y  +IH L  +  + EA  +   M   G   ++ T+N L
Sbjct: 194 GDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDL 253

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G C +  V  A      M+     P+VVT+G L+ GLC+  +   A       A  G 
Sbjct: 254 VLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA------CAMLGR 307

Query: 256 FP--NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            P  N+ + N +I G    G L  A  L   M      PDV TY+IL+ GLC +G+   A
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L +M ++G   N+VTY++L+  +C+ G  + A ++  QM  KG   N   ++ +I  
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYA 427

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G +D A  L  EM  +   PD+  +  +I  L  +  M+E   +++ ++E  +  +
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T ++LIH L +NGR    L    E         C  + + Y  +I+ALC +G + ++ 
Sbjct: 488 GITYNTLIHALLRNGRWQEGLRLASEMLLHG----CQLDVISYNGLIKALCKEGNVDRSM 543

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M +  ++P+N +Y  ++  L +A ++ D + L  +M+  G+ PD V    ++ G 
Sbjct: 544 ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            + G   +A    E L    +
Sbjct: 604 CKVGWTHAALNLLEKLPNENV 624



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 38/327 (11%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S L+    ++G    A+ +  ++E     P I   + LL+   + G +D      ++M
Sbjct: 350 TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   +   Y  +I   C  G + +A  L  EM  +G +P +  Y  +I+ LCN + M
Sbjct: 410 LAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLM 469

Query: 171 VEAESMFRSMRECGVVPN-----------------------------------LYTYNAL 195
            EAE +FR++ E GVV N                                   + +YN L
Sbjct: 470 EEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGL 529

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   CK  +V+R++    EM+   ++PN  ++ +L++ LCK G++R A      M   G+
Sbjct: 530 IKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 589

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+I  YN LI+G CK G    A++L  ++    + PD+ TYNILI   C V  L+ A  
Sbjct: 590 TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAM 649

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKE 342
           LL K    GI+ N  T+  ++  + ++
Sbjct: 650 LLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 3/128 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ LI    + G + +AL + +++    + P I   N L+NGL K G   +   
Sbjct: 555 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 614

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             E++    +  D+VTY +LI   C    +  A  L D+ I  GI P    + +++    
Sbjct: 615 LLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFV 674

Query: 166 NENKMVEA 173
            +   +E 
Sbjct: 675 RQTVNLEG 682


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 238/461 (51%), Gaps = 11/461 (2%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           LA  +++  A+ LI+     L+ SRK  +   SVF +L  + +      +   L+I +++
Sbjct: 128 LAVHEMFTEAQSLIE-----LVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTD 182

Query: 65  MGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +G I +A+  +R   K      I+ C  LL+ ++K     ++W FY E++  G   +V  
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYV 242

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           + +L++  C +G++  A  +FDE+  + ++PTVV +  LI+G C    + E   +   M 
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           +    P+++TY+AL++  CK   ++ A   + EM    L PN V F  L+ G  + GE+ 
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                +  M   G+ P+I +YN L++G CK G+L  A ++   M +  + PD  TY  LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C  G +E A  + ++M + GI  + V +++L+ G CKEG +  A     +M   G++
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ VT++ ++D  CK G+      L  EM     VP VV +  L++GL K G MK    L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
              ML   + P   T ++L+ G   + R +N+   +++K +
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPE 580



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 191/364 (52%), Gaps = 4/364 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+D   K+        FY E+L      NV  F +LM+  CK G +  A   F  + K  
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + P +  +N LI+G+CK GNL E   L  +MEK    PDVFTY+ LI  LC   +++GA 
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           GL  +M K G++ N V + +LI G+ + G+++       +M  KG++P++V +++L++G 
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G++ AA  +   M+ + L PD + +T LIDG  + G+++  L + KEM +  I    
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              S+L+ G+ K GR+ +A     E           P+ V Y  ++ A C  G      K
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAG----IKPDDVTYTMMMDAFCKKGDAQTGFK 506

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M+SD   P   TY  +L GL +  +M +  MLL  M+ +G+VPD +    ++ G+ 
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHH 566

Query: 555 ENGD 558
            + +
Sbjct: 567 RHAN 570



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 5/391 (1%)

Query: 173 AESMFRSMRECGVVPNL-YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           A S+F S+ E  V P   +  +ALM  Y  +  +  A++ +     H     +   G L+
Sbjct: 153 ASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLL 212

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D + K+        F++ +   G   N++V+N L++  CK GN+ +A  +  E+ K  + 
Sbjct: 213 DRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQ 272

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V ++N LI G C VG L+    L  +M K     +V TY++LI+  CKE  M+ A  +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M ++G+ PN V F++LI G  + G ID     Y +M+ K L PD+V++  L++G  K
Sbjct: 333 FDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           +G++     +   M+   + P   T ++LI G  + G +  AL    E   + D      
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL----EIRKEMDQNGIEL 448

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + V ++A++  +C +G+++ A +   +M    ++PD+ TYT M+    +         LL
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +M   G VP  V   V++ G  + G +K+A
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 259/542 (47%), Gaps = 7/542 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEAL-WVYRKIEVL- 81
           +LL + +   + + V+N +     P+ +    S LI    E   +E+A+ +++   +V+ 
Sbjct: 210 SLLHNMRHTDIMWDVYNEIKVSGAPQ-SECTTSILIHGLCEQSKLEDAISFLHDSNKVVG 268

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I + N +++   K G  D    F+  MV  GL+ D  +Y +L+   C  G + +AL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D+M   G+EP VV Y  L  G      M  A  + + M   G+ P+L TY  L+ G+C+
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + ++  AL+   E L    + NV+ + +L+  LCKVG +  A   F  M    + P+  V
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G CK G +  A  L  +M      P  F    ++ GL   G +  A        
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           +  ++ +VV YN +IDGY +   + +A+ +  +M E+G+ P+VVTF++LI+G C+ G++ 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +   + +K LVP VV +T L++   + GNM+E      EM    + P+  T + LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL +  ++  +L        K       P+ V Y  IIQ  C   +I KA +L++ M  
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKG----LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            N  P   TY  ++  L     + DV  ++  +    I    V    +++ +   G +  
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSK 744

Query: 562 AF 563
           A 
Sbjct: 745 AL 746



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 255/515 (49%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF-DSVWEFYEE 109
           N  V+  L  A+S    I +AL+V  K++ L   QA     N L+   +  D +W+ Y E
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN-FQASVPTYNSLLHNMRHTDIMWDVYNE 227

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           + + G      T  +LI   C Q  +  A++   +  +K + P++V    ++   C    
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGL 286

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A S F  M + G++ + ++YN L+ G C    ++ AL F  +M  H ++P+VVT+  
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G   +G +  A      M   G+ P++  Y  LI GHC+ GN+ EA+ L  E     
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              +V  YN+L+  LC VG++E A  L  +M    +  + + Y+ LI G CKEG +++A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  QM  K   P+     +++ G  K GNI  A   +       L+ DVV++  +IDG 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   + E ++LY +M+E  ITPSV T ++LI+G  + G +  A      +  +  G   
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML--EVIRLKG--L 582

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  ++ A C  G + +      +M ++ + P + TYT +++GL R  +M + + 
Sbjct: 583 VPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQ 642

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LL  M   G++PD+V    +++ + +  ++  A +
Sbjct: 643 LLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ 677



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 238/489 (48%), Gaps = 7/489 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL   F  +G +  A  V +K+ +    P +     L+ G  + G  +   +  +E +
Sbjct: 344 YNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETL 403

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +V+ Y +L+ C C  G + +AL LFDEM    +EP  ++Y+ILIHGLC E  + 
Sbjct: 404 SRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQ 463

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  ++  MR     P+ +   A++ G  K  +++ A  ++      +L  +VV + +++
Sbjct: 464 RAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG  ++  +  A   +  M + G+ P++  +N LI+G C+ G+L EA  +   +    + 
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV 583

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V TY  L+   C VG ++     L +M    ++   VTY  LI G C++  M ++L +
Sbjct: 584 PSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  KG+ P+ VT++++I   CK   I  A+ LY  M++ +  P  V +  LI+ L  
Sbjct: 644 LEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G++K+  R+   + +  IT    T  ++I      G++S AL +F +   K  G   S 
Sbjct: 704 FGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAK--GFVISI 761

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               Y+A+I  LC  G I +A   F  M S+ + PD     T+L    +      V   L
Sbjct: 762 RD--YSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819

Query: 532 ADMIKMGIV 540
           A ++K G +
Sbjct: 820 AMVVKSGFI 828



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 8/416 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L         + +A  +   M++     ++ TYN+L+     +   +   + Y+E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHN---MRHTDIMWDVYNE 227

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +       +  T  +L+ GLC+  +L  A +F +H +   V P+I   N ++   CK G 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISF-LHDSNKVVGPSIVSINTIMSKFCKVGL 286

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A S    M K  +  D F+YNIL+ GLC  G ++ A G    M K G+  +VVTYN+
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L  G+   G M  A  V  +M  +G+ P++VT+++LI G C+ GNI+ A+ L  E + + 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
              +V+ +  L+  L K G ++E L L+ EM   ++ P     S LIHGL K G +  A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             + +   K       P+H    A++  L  +G I +A   F      +L  D   Y  M
Sbjct: 467 QLYEQMRLKRK----FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + G +R   + + M L   MI+ GI P  V    ++ G+   GDL  A +  E ++
Sbjct: 523 IDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 5/248 (2%)

Query: 51  NPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
            PSV  F+TLI  F   G + EA   L V R   ++P++     L+N   + G    ++ 
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFH 607

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F  EM    +V   VTY VLI   C Q  + ++L L + M  KG+ P  V Y  +I   C
Sbjct: 608 FLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ +A  ++  M      P   TY  L++  C   D+         +   N+    V
Sbjct: 668 KGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKV 727

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  ++   C  G++  A  +F  M   G   +I  Y+ +I+  CK G + EA      M
Sbjct: 728 TYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMM 787

Query: 286 EKFEISPD 293
               ++PD
Sbjct: 788 LSEGVTPD 795


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 232/457 (50%), Gaps = 5/457 (1%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           + G +       E MV  G   DV+    LI       ++ KA+ +  E+++K  +P V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  LI+G C  N++ +A  +   MR     P+  TYN ++   C    ++ AL+  +++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           L  N QP V+T+ +L++     G +  A      M   G+ P++F YN +I G CK G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  +   +E     PDV +YNIL++ L   G+ E  E L+ KM+ E    NVVTY+ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C++G +E+A+++   M EKG+ P+  ++  LI   C+ G +D A+     M+    
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           +PD+V +  ++  L K+G   + L ++ ++ E   +P+  + +++   L+ +G    AL+
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             LE    ++G    P+ + Y ++I  LC +G + +A +L  DMRS    P   TY  +L
Sbjct: 460 MILEMM--SNG--IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            G  +A R+ D + +L  M+  G  P+     V++ G
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
           +NP V   + LI  F  + +I +A+ V   +E    P + A NAL+NG  K  + D    
Sbjct: 120 YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATR 179

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M       D VTY ++I   C +G +  AL + ++++    +PTV+ YTILI    
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  + EA  +   M   G+ P+++TYN ++ G CK   V+RA E    +     +P+V+
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+  L   G+          M      PN+  Y+ LI   C+ G + EAM+L   M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  ++PD ++Y+ LI   C  G+L+ A   L+ M  +G L ++V YN+++   CK G  
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL +  ++ E G  PN  +++++      +G+   A+ +  EM+   + PD + + ++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L ++G + E   L  +M   +  PSV T + ++ G  K  RI +A+N      +   
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL----ESMV 535

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           G  C PN   Y  +I+ + + G   +A +L +D+
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 9/459 (1%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G+ +++L+L + M+ KG  P V++ T LI G      + +A  +   + + G  P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + YNAL++G+CK+  ++ A      M   +  P+ VT+ +++  LC  G+L  A      
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +      P +  Y  LI+     G + EA+ L  EM    + PD+FTYN +I+G+C  G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  +++ +  +G   +V++YN L+     +G  E+   + ++M  +  +PNVVT+S 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI   C+ G I+ AM L   M  K L PD   +  LI    ++G +   +   + M+   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P +   ++++  L KNG+   AL  F     K     CSPN   Y  +  AL   G  
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF----GKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           ++A  +  +M S+ + PD  TY +M+  L R   + +   LL DM      P  V   ++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           + G+ +   ++ A      + ES +G+      TT + L
Sbjct: 515 LLGFCKAHRIEDAIN----VLESMVGNGCRPNETTYTVL 549



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 5/355 (1%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEM--GHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN L      P+V +  I+  + M  G ++EAL +  ++    + P +   N ++ G+ K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G  D  +E    + L G   DV++Y +L+     QG   +   L  +M  +  +P VV 
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ILI  LC + K+ EA ++ + M+E G+ P+ Y+Y+ L+  +C+   ++ A+EF   M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P++V +  ++  LCK G+   A   F  + + G  PN   YN +      +G+  
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A+ +  EM    I PD  TYN +I  LC  G ++ A  LL  M       +VVTYN ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            G+CK   +E A++V   M   G  PN  T++ LI+G   AG    AM L  ++V
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 5/246 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K +P+V  +S LI      G IEEA+ + + ++   + P   + + L+    ++G+ D  
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            EF E M+  G + D+V Y  ++   C  G   +AL +F ++ + G  P    Y  +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           L +    + A  M   M   G+ P+  TYN+++   C+   V+ A E   +M      P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+ +++ G CK   +  A N    M   G  PN   Y  LI+G   AG   EAM L +
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567

Query: 284 EMEKFE 289
           ++ + +
Sbjct: 568 DLVRID 573


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 246/522 (47%), Gaps = 36/522 (6%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           EI   N   +ST++        +E+A+   R  E   + P++ + N++++G  K G  D 
Sbjct: 223 EIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM 282

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              F+  ++ CGLV  V ++ +LI+  C  G + +AL L  +M   G+EP  V Y IL  
Sbjct: 283 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 342

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G      +  A  + R M + G+ P++ TY  L+ G C++ +++  L    +ML    + 
Sbjct: 343 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 402

Query: 223 N-VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           N ++   V++ GLCK G +  A + F  M   G+ P++  Y+ +I G CK G    A+ L
Sbjct: 403 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 462

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P+  T+  L+ GLC  G L  A  LL  +   G   ++V YN +IDGY K
Sbjct: 463 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 522

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+AL +   + E G+ P+V TF+SLI G CK  NI  A  +   + +  L P VV 
Sbjct: 523 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 582

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+D  +  GN K    L +EM    I P+  T S +  GL +  +  N         
Sbjct: 583 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC-------- 634

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                     NHVL   I +  C  G          DM S+ + PD  TY T+++ L R 
Sbjct: 635 ----------NHVLRERIFEK-CKQG--------LRDMESEGIPPDQITYNTIIQYLCRV 675

Query: 522 KRMLDVMMLLADMIKMGIVPDA-----VINQVMVRGYQENGD 558
           K +    + L  M    +   +     +I+ + V GY    D
Sbjct: 676 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 717



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 56/489 (11%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           K  +++ E+ DK  E T   Y+ ++ GLC + K+ +A    R+     + P++ ++N++M
Sbjct: 216 KMWDVYKEIKDKN-EHT---YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 271

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYCK+  V+ A  F+  +L   L P+V +  +L++GLC VG +  A      M K GV 
Sbjct: 272 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 331

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN L  G    G +  A  +  +M    +SPDV TY IL+ G C +G ++    L
Sbjct: 332 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 391

Query: 317 LQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M   G  L +++  + ++ G CK G +++ALS+ +QM   G+ P++V +S +I G C
Sbjct: 392 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 451

Query: 376 KAGNIDAAMGLYTEMVIKSLVP-----------------------------------DVV 400
           K G  D A+ LY EM  K ++P                                   D+V
Sbjct: 452 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 511

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++  +IDG +K G ++E L L+K ++E  ITPSV T +SLI+G  K   I+ A       
Sbjct: 512 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--- 568

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-- 518
            D       +P+ V Y  ++ A    G      +L  +M+++ + P N TY+ + +GL  
Sbjct: 569 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 627

Query: 519 ----------LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
                     LR +        L DM   GI PD +    +++       L  AF   E 
Sbjct: 628 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 687

Query: 569 LKESRIGSS 577
           +K   + +S
Sbjct: 688 MKSRNLDAS 696



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 224/426 (52%), Gaps = 14/426 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           +L +  +M D+ +  +   Y  +++     +KM +   +++ +++     N +TY+ ++D
Sbjct: 185 SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVD 237

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C+   +  A+ F       ++ P+VV+F  +M G CK+G +  A +FF  + K G+ P
Sbjct: 238 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 297

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +++ +N LI+G C  G++ EA+ L S+M K  + PD  TYNIL KG   +G + GA  ++
Sbjct: 298 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 357

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN-VVTFSSLIDGQCK 376
           + M  +G+  +V+TY  L+ G C+ G+++  L +   M  +G E N ++  S ++ G CK
Sbjct: 358 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 417

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G ID A+ L+ +M    L PD+V ++ +I GL K G     L LY EM + +I P+  T
Sbjct: 418 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 477

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
             +L+ GL + G +  A +      D       + + VLY  +I      G I +A +LF
Sbjct: 478 HGALLLGLCQKGMLLEARSLL----DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM-GIVPDAVINQVMVRGYQE 555
             +    + P   T+ +++ G  + + + +   +L D+IK+ G+ P  V    ++  Y  
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYAN 592

Query: 556 NGDLKS 561
            G+ KS
Sbjct: 593 CGNTKS 598



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 195/394 (49%), Gaps = 15/394 (3%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S ++    + G I+EAL ++ +++   + P + A + +++GL K GKFD     Y+EM  
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             ++ +  T+G L+   C +G +++A +L D +I  G    +V+Y I+I G      + E
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F+ + E G+ P++ T+N+L+ GYCK  ++  A +    +  + L P+VV++  LMD
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-----------NLFEAMSL 281
                G  ++       M   G+ P    Y+ +  G C+              +FE    
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648

Query: 282 -CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
              +ME   I PD  TYN +I+ LC V  L GA   L+ M    + A+  TYN LID  C
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G + KA S    + E+ V  +   +++LI   C  G+ + A+ L+ +++ +     + 
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            ++A+I+ L +   + E+   +  ML   I+P +
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 12/389 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L +I  C+ +L+GL K G+ D     + +M   GL  D+V Y ++I   C  G    AL 
Sbjct: 402 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 461

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L+DEM DK I P    +  L+ GLC +  ++EA S+  S+   G   ++  YN ++DGY 
Sbjct: 462 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 521

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  ALE +  ++   + P+V TF  L+ G CK   +  A      +  +G+ P++ 
Sbjct: 522 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 581

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK- 319
            Y  L+D +   GN      L  EM+   I P   TY+++ KGLC   + E    +L++ 
Sbjct: 582 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER 641

Query: 320 -----------MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
                      M  EGI  + +TYN++I   C+   +  A      M  + ++ +  T++
Sbjct: 642 IFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 701

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            LID  C  G I  A      +  +++      +T LI      G+ +  ++L+ ++L  
Sbjct: 702 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 761

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFF 457
               S+   S++I+ L +   ++ +  FF
Sbjct: 762 GFNVSIRDYSAVINRLCRRHLVNESKFFF 790



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 211/425 (49%), Gaps = 14/425 (3%)

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAE-SMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           +  E T +++ +L+  L +  +MV+    + + M++  +  +  +YN+++  +    + +
Sbjct: 160 RKWESTGLVWDMLLF-LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETD 215

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
           +  + Y E+   N      T+  ++DGLC+  +L  A  F        + P++  +N ++
Sbjct: 216 KMWDVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 271

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+CK G +  A S    + K  + P V+++NILI GLC VG +  A  L   M K G+ 
Sbjct: 272 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 331

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            + VTYN L  G+   G +  A  V   M +KG+ P+V+T++ L+ GQC+ GNID  + L
Sbjct: 332 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 391

Query: 387 YTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
             +M+ +   +  ++  + ++ GL K G + E L L+ +M    ++P +   S +IHGL 
Sbjct: 392 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 451

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G+   AL  + E  DK       PN   + A++  LC  G +L+A  L   + S    
Sbjct: 452 KLGKFDMALWLYDEMCDKR----ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 507

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
            D   Y  ++ G  ++  + + + L   +I+ GI P       ++ GY +  ++  A + 
Sbjct: 508 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 567

Query: 566 SEFLK 570
            + +K
Sbjct: 568 LDVIK 572



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 17/382 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
            N ++    +P +  +S +I    ++G  + ALW+Y ++    +LP  +   ALL GL +
Sbjct: 428 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 487

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG         + ++  G   D+V Y ++ID     G + +AL LF  +I+ GI P+V  
Sbjct: 488 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 547

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  LI+G C    + EA  +   ++  G+ P++ +Y  LMD Y    +     E   EM 
Sbjct: 548 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 607

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH------------MAKFGVFPNIFVYNC 264
              + P  VT+ V+  GLC+  +     +                M   G+ P+   YN 
Sbjct: 608 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 667

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I   C+  +L  A      M+   +     TYNILI  LC  G +  A+  +  + ++ 
Sbjct: 668 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 727

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +   Y +LI  +C +GD E A+ +  Q+  +G   ++  +S++I+  C+   ++ + 
Sbjct: 728 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESK 787

Query: 385 GLYTEMVIKSLVPDVVVFTALI 406
             +  M+ + + PD+ +   +I
Sbjct: 788 FFFCLMLSQGISPDLDICEVMI 809



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  +YKE    N  TY++++DG C++  +E A+        K + P+VV+F+S++ G CK
Sbjct: 217 MWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 276

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   +  ++   LVP V     LI+GL   G++ E L L  +M +  + P   T
Sbjct: 277 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 336

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY-------------------- 476
            + L  G    G IS A     +  DK      SP+ + Y                    
Sbjct: 337 YNILAKGFHLLGMISGAWEVIRDMLDKG----LSPDVITYTILLCGQCQLGNIDMGLVLL 392

Query: 477 ----------------AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                           + ++  LC  G+I +A  LF+ M++D L PD   Y+ ++ GL +
Sbjct: 393 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 452

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             +    + L  +M    I+P++  +  ++ G  + G L  A      L +S I S ET
Sbjct: 453 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGET 507



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 50/300 (16%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I  +++ G IEEAL +++ +    + P++   N+L+ G  K        +  + +
Sbjct: 512 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 571

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC----N 166
            L GL   VV+Y  L+D     G+      L  EM  +GI PT V Y+++  GLC    +
Sbjct: 572 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 631

Query: 167 EN-KMVEAESMF-------RSMRECGVVPNLYTYNA------------------------ 194
           EN   V  E +F       R M   G+ P+  TYN                         
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691

Query: 195 -----------LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
                      L+D  C    + +A  F + +   N+  +   +  L+   C  G+   A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  +   G   +I  Y+ +I+  C+   + E+      M    ISPD+    ++IK 
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 811


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVA---DVVTYGVLIDCCCGQGDVMKALNLFDE 144
           N++LN +I++G F    EFY  ++    V+   +V+T+ ++I   C  G V  A+ +F +
Sbjct: 165 NSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRD 224

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M  +  EP V  Y  L+ GLC  +++ EA S+   M+  G  P+  T+N L++G CK  D
Sbjct: 225 MTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGD 284

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           ++RA +    M      PN VT+  L+ GLC  G+L  A +    M      PN+  Y  
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I+G  K G   +   + + ME+     + + Y+ LI GL   G+ + A  L ++M  +G
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              N + Y+++IDG C++G  + A+ V S+MT KG  PN  T SSL+ G  +AGN   A+
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAV 464

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +M   +   + V ++ LI GL KDG +KE + ++ +ML     P V   SS+I+GL
Sbjct: 465 EVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
              G + +A+  + E      G    P+ V Y  ++  LC    I +A  L + M     
Sbjct: 525 SIAGLVEDAMQLYNEML--CQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGC 582

Query: 505 RPDNCTYTTMLRGLLRAK 522
            PD  T T  LR +LR K
Sbjct: 583 DPDLVTCTIFLR-MLREK 599



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 229/447 (51%), Gaps = 15/447 (3%)

Query: 132 QGDVMKALNLFDEMID-KG--IEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVV 186
           +G   +AL  ++ +I  KG  I P V+ + ++I  +C    + +A  +FR M  R+C   
Sbjct: 174 EGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCE-- 231

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++YTY  LMDG CK   ++ A+    EM      P+ VTF VL++GLCK G+L  A   
Sbjct: 232 PDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKL 291

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
             +M   G  PN   YN LI G C  G L +A+SL   M   +  P+V TY  +I GL  
Sbjct: 292 VDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK 351

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+      +L  M + G   N   Y++LI G  KEG  ++A+ +  +MT KG E N + 
Sbjct: 352 QGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIV 411

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           +S++IDG C+ G  D A+ + +EM  K   P+    ++L+ G  + GN    + ++K+M 
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +   T +    S LIHGL K+G++  A+  + +      G  C P+ V Y+++I  L   
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQML----GKGCKPDVVAYSSMINGLSIA 527

Query: 487 GQILKASKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           G +  A +L+++M  +  + +PD  TY  +L  L +   +   + LL  M+  G  PD V
Sbjct: 528 GLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLV 587

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKE 571
              + +R  +E  D     R  EFL E
Sbjct: 588 TCTIFLRMLREKLDPPQDGR--EFLDE 612



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 213/422 (50%), Gaps = 14/422 (3%)

Query: 137 KALNLFDEMI------DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           KA++LFD M         G     V+  I+  GL +  + +E  +     +   + PN+ 
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFH--RALEFYNHVIGAKGVSISPNVL 200

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
           T+N ++   CKV  V+ A++ + +M     +P+V T+  LMDGLCK   +  A +    M
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              G FP+   +N LI+G CK G+L  A  L   M      P+  TYN LI GLC  G+L
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A  LL +M     + NVVTY ++I+G  K+G       V + M E+G   N   +S+L
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I G  K G    AM L+ EM +K    + +V++A+IDGL +DG   + + +  EM     
Sbjct: 381 ISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           TP+ +T SSL+ G F+ G    A+  +    D     + + N V Y+ +I  LC DG++ 
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVW---KDMAKHNF-TQNEVCYSVLIHGLCKDGKVK 496

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI--VPDAVINQV 548
           +A  +++ M     +PD   Y++M+ GL  A  + D M L  +M+  G    PD V   +
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 549 MV 550
           ++
Sbjct: 557 LL 558



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 238/503 (47%), Gaps = 33/503 (6%)

Query: 55  FSTLIIAFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           F++++    + G    AL  Y      + + + P +   N ++  + K G  D   + + 
Sbjct: 164 FNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFR 223

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M +     DV TY  L+D  C    + +A++L DEM   G  P+ V + +LI+GLC + 
Sbjct: 224 DMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 283

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            +  A  +  +M   G +PN  TYN L+ G C    + +A+     M+     PNVVT+G
Sbjct: 284 DLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYG 343

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +++GL K G           M + G   N +VY+ LI G  K G   EAM L  EM   
Sbjct: 344 TIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVK 403

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
               +   Y+ +I GLC  G+ + A  +L +M  +G   N  T +SL+ G+ + G+  +A
Sbjct: 404 GYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRA 463

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + V   M +     N V +S LI G CK G +  AM ++T+M+ K   PDVV ++++I+G
Sbjct: 464 VEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMING 523

Query: 409 LSKDGNMKETLRLYKEML--EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           LS  G +++ ++LY EML       P V T + L++ L K   IS A++      D+   
Sbjct: 524 LSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRG-- 581

Query: 467 GYCSPNHVLYAAIIQAL------CYDG---------------QILKASKLFSDMRSDNLR 505
             C P+ V     ++ L        DG               ++L ASK+   M    L 
Sbjct: 582 --CDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLP 639

Query: 506 PDNCTYTTMLRGLLRAKRMLDVM 528
           P + T+  ++  L + K++  V+
Sbjct: 640 PKHSTWARVVENLCKPKKVQAVI 662



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 199/377 (52%), Gaps = 7/377 (1%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHH---NLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           ++N++++   +    +RALEFY+ ++     ++ PNV+TF +++  +CKVG +  A   F
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M      P+++ Y  L+DG CKA  + EA+SL  EM+     P   T+N+LI GLC  
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G L  A  L+  M+ +G + N VTYN+LI G C +G +EKA+S+  +M      PNVVT+
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            ++I+G  K G       +   M  +    +  V++ LI GL K+G  +E + L+KEM  
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
                +    S++I GL ++G+  +A+    E T+K     C+PN    +++++     G
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG----CTPNAYTCSSLMKGFFEAG 458

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
              +A +++ DM   N   +   Y+ ++ GL +  ++ + MM+   M+  G  PD V   
Sbjct: 459 NSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYS 518

Query: 548 VMVRGYQENGDLKSAFR 564
            M+ G    G ++ A +
Sbjct: 519 SMINGLSIAGLVEDAMQ 535



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV----LPAIQACNALLNGLIKKGKFDSVWEF 106
           N  V+STLI    + G  +EA+ +++++ V    L  I   +A+++GL + GK D   E 
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTI-VYSAVIDGLCRDGKPDDAVEV 431

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
             EM   G   +  T   L+      G+  +A+ ++ +M         V Y++LIHGLC 
Sbjct: 432 LSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCK 491

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQPNV 224
           + K+ EA  ++  M   G  P++  Y+++++G      V  A++ Y+EML    + QP+V
Sbjct: 492 DGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDV 551

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           VT+ +L++ LCK   +  A +    M   G  P++
Sbjct: 552 VTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDL 586



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TF SLI+     G+  +   +   M  +  V     F  +     K    ++ + L+  M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 426 ---LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
               E K T   F  +S+++ + + G    AL F+        G   SPN + +  +I+A
Sbjct: 152 ACEFECKRTGKSF--NSVLNVIIQEGLFHRALEFY-NHVIGAKGVSISPNVLTFNLVIKA 208

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +C  G +  A ++F DM      PD  TY T++ GL +A R+ + + LL +M   G  P 
Sbjct: 209 MCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPS 268

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
            V   V++ G  + GDL  A +
Sbjct: 269 PVTFNVLINGLCKKGDLSRAAK 290



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV---TFSSLIDGQCKAGNIDAAMGLY 387
           T+ SLI+ Y   GD +    V  +M     E  V+    F  +     KA   + A+ L+
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMK---CEKRVIFEKCFIVIFKAYGKAHLPEKAVDLF 148

Query: 388 TEMVIKSLVPDV-VVFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTVSSLIHG 443
             M  +         F ++++ + ++G     L  Y  ++ AK   I+P+V T + +I  
Sbjct: 149 DRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKA 208

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           + K G + +A+  F + T +     C P+   Y  ++  LC   +I +A  L  +M+ D 
Sbjct: 209 MCKVGLVDDAIQVFRDMTIRK----CEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 264

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             P   T+  ++ GL +   +     L+ +M   G +P+ V    ++ G    G L+ A 
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAI 324


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 162/590 (27%), Positives = 266/590 (45%), Gaps = 72/590 (12%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEAL--WVYRKI---EVLPAIQACNALLNG 93
           F +L + + P  +PS+    ++  S + H       W+Y  +    V P     N L++ 
Sbjct: 101 FKSLRA-QFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHS 159

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L +   FD   + +E+M   G   +  T G+L+   C  G V +AL L +      I   
Sbjct: 160 LCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANR 219

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV Y  L+   C E    EAE +   M E GV+P++ T+N+ +   C+   V  A   + 
Sbjct: 220 VV-YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFR 278

Query: 214 EM-LHHNL---QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +M +   L   +PNVVTF +++ G CK G +  A      M K G F ++  YN  + G 
Sbjct: 279 DMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGL 338

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            + G L EA  +  EM    I P+ +TYNI++ GLC    L  A GL+  M + G+  + 
Sbjct: 339 LRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDT 398

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL------------------- 370
           V Y++L+ GYC  G + +A SV  +M   G +PN  T ++L                   
Sbjct: 399 VAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQK 458

Query: 371 ----------------IDGQCKAGNIDAAMGLYTEMV----------------------I 392
                           ++G C+ G +D A  + +EM                       +
Sbjct: 459 MNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNV 518

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            + +PD + +T LI+GL K G ++E  + + EML   + P   T  + I    K G+IS+
Sbjct: 519 SNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISS 578

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A  F + K  + +G  CS     Y A+I  L  + QI +   L  +M+   + PD CTY 
Sbjct: 579 A--FRVLKDMERNG--CSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYN 634

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            ++  L    +  D + LL +M+  GI P+    +++++ + ++ D K A
Sbjct: 635 NIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVA 684



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 229/538 (42%), Gaps = 34/538 (6%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEV-------LPAIQACNALLNGLIKKGKFDSVWEF 106
            F++ I A    G + EA  ++R +++        P +   N +L G  K G        
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGL 315

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E M   G    +  Y + +      G++++A  + DEM+ KGIEP    Y I++ GLC 
Sbjct: 316 VETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCR 375

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            + + +A  +   M   GV P+   Y+ L+ GYC    V  A    HEM+ +  QPN  T
Sbjct: 376 NHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYT 435

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
              L+  L K G    A      M +    P+    N +++G C+ G L +A  + SEM 
Sbjct: 436 CNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMW 495

Query: 287 K-------------------FEIS---PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
                                 +S   PD  TY  LI GLC VG+LE A+    +M  + 
Sbjct: 496 TNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKN 555

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  + VTY++ I  +CK+G +  A  V   M   G    + T+++LI G      I    
Sbjct: 556 LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIY 615

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           GL  EM  K + PD+  +  +I  L + G  K+ + L  EML+  I+P+V +   LI   
Sbjct: 616 GLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAF 675

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K+     A   F     +     C     LY+ +   L   GQ+ +A +LF       L
Sbjct: 676 SKSSDFKVACELF-----EVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYL 730

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              N  Y  ++  L + +R+ D   LL  +I  G   D      ++ G  + G+ + A
Sbjct: 731 TLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQA 788



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 238/534 (44%), Gaps = 67/534 (12%)

Query: 45  LEIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFD 101
           L +P+ N   F+ ++  F + G + +A   +   +K+    +++  N  L GL++ G+  
Sbjct: 286 LGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELL 345

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
                 +EMV  G+  +  TY +++D  C    +  A  L D M+  G+ P  V Y+ L+
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM------------------------- 196
           HG C+  K+ EA+S+   M   G  PN YT N L+                         
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQ 465

Query: 197 ----------DGYCKVADVNRALEFYHEMLH-------------------HNLQ---PNV 224
                     +G C+  ++++A E   EM                     HN+    P+ 
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           +T+  L++GLCKVG L  A   F+ M    + P+   Y+  I   CK G +  A  +  +
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKD 585

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           ME+   S  + TYN LI GL    Q+    GL  +M ++GI  ++ TYN++I   C+ G 
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            + A+S+  +M +KG+ PNV +F  LI    K+ +   A  L+ E+ +        +++ 
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSL 704

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           + + L   G + E   L++  L+  +T   F    LI  L ++ R+++A +   +  DK 
Sbjct: 705 MFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDK- 763

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL--RPDNCTYTTMLR 516
             GY   +H  +  +I  L   G   +A +L   M    L  RP + TY+   R
Sbjct: 764 --GY-GFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKR 814


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 242/505 (47%), Gaps = 18/505 (3%)

Query: 51  NPSVFSTLII-AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
            P   STL + AF EM              V P ++ CN +L  L    ++D +   + E
Sbjct: 172 TPDTCSTLCLSAFREMA----------SHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAE 221

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE--PTVVIYTILIHGLCNE 167
           M+  G+   +VTY  L+D    +G   K   L  EM  +G    P  V Y ++I GL  +
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARK 281

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             + EA  +   MR      + +TYN L+ G      V +  +   EM +  + P VVT+
Sbjct: 282 GYLEEAAELVEEMRLSKKASS-FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTY 340

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++ GL + G++ AA   FV M   G+ P++  YN L++G+CKAGN  EA+ L  ++ +
Sbjct: 341 NAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRR 400

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             ++P V TYNILI G C +G LE A  L ++M ++G L +V TY  L+ G      +  
Sbjct: 401 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAM 460

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
                 +M  KG+ P+   +++ I  +   G+I  +  L   ++++ +  D V +  LID
Sbjct: 461 TREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL K GN+K+   L  +M+   + P   T + LIH   + G +  A  FF +    +DG 
Sbjct: 521 GLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMI--SDG- 577

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P+ V Y  II A C  G +  A   F  M  + + P+  TY  ++  L R  R    
Sbjct: 578 -LPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 636

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
                +M++ G+VP+     +++ G
Sbjct: 637 YRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 212/432 (49%), Gaps = 17/432 (3%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L+ F EM   G+ P V     ++  L +  +  +  ++   M + G+ P++ TYN L+D 
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 199 YCKVADVNRALEFYHEMLHHNLQ--PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           + K    ++      EM        PN VT+ V++ GL + G L  A      M +    
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKK 299

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
            + F YN LI G    G + +   L  EME   I P V TYN +I GL   GQ+E A+  
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M   G+L +V+TYNSL++GYCK G+ ++AL +   +   G+ P V+T++ LIDG C+
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G+++ A  L  EMV +  +PDV  +T L+ G     ++  T   + EML   + P  F 
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            ++ I      G IS +  F L +    +G   S + V Y  +I  LC  G +  A +L 
Sbjct: 480 YNTRICAEITLGDISKS--FQLREVIMLEG--ISSDTVTYNILIDGLCKTGNLKDAEELM 535

Query: 497 SDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             M S+ L+PD  TYT ++     RG LR  R         DMI  G+ P AV   V++ 
Sbjct: 536 MQMISNGLQPDCITYTCLIHAHCERGFLREAR-----KFFNDMISDGLPPSAVTYTVIIH 590

Query: 552 GYQENGDLKSAF 563
            Y   G+L SA+
Sbjct: 591 AYCRRGNLYSAY 602



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 194/404 (48%), Gaps = 42/404 (10%)

Query: 12  KNARCLIKDVTENLL---KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHI 68
           + + CL  DVT N++    +RK +    +       L   K +   ++ LI      G +
Sbjct: 260 RGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLS-KKASSFTYNPLITGLLARGFV 318

Query: 69  EEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           ++   +  ++E   ++P +   NA+++GL++ G+ ++    + EM   GL+ DV+TY  L
Sbjct: 319 KKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSL 378

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ++  C  G+  +AL LF ++   G+ PTV+ Y ILI G C    + EA  +   M E G 
Sbjct: 379 LNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGC 438

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN---------------------- 223
           +P++YTY  LM G   V  +    EF+ EML   L+P+                      
Sbjct: 439 LPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQ 498

Query: 224 -------------VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
                         VT+ +L+DGLCK G L+ A    + M   G+ P+   Y CLI  HC
Sbjct: 499 LREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHC 558

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G L EA    ++M    + P   TY ++I   C  G L  A G  +KM +EG+  N +
Sbjct: 559 ERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 618

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
           TYN LI   C+ G  + A     +M E+G+ PN  T++ LIDG+
Sbjct: 619 TYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGK 662



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 7/258 (2%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
            ++M   G+  +V   N ++         +   +V ++M + G+EP++VT+++L+D   K
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 377 AGNIDAAMGLYTEMVIK--SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            G  D    L  EM  +  S +P+ V +  +I GL++ G ++E   L +EM  +K   S 
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA-SS 302

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT + LI GL   G +    +  LE  ++       P  V Y A+I  L   GQI  A  
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEG----IMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
            F +MR+  L PD  TY ++L G  +A    + ++L  D+ + G+ P  +   +++ GY 
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC 418

Query: 555 ENGDLKSAFRCSEFLKES 572
             GDL+ A R  E + E 
Sbjct: 419 RLGDLEEARRLKEEMVEQ 436


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 234/465 (50%), Gaps = 8/465 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   ++ +F+E+G ++EA+ +  ++    + P+ +  N ++  + + G  +     ++EM
Sbjct: 134 VMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEM 193

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  + V+Y V++   C  G+V+++      MI++G        ++++   C +  +
Sbjct: 194 CARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFV 253

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A   FR   E G+ PNL  +  +++G CK   V +A E   EM+    +PNV T   L
Sbjct: 254 TRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTAL 313

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G    A   F+ + +     PN+  Y  +I G+C+   +  A  L S M++  
Sbjct: 314 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQG 373

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++P+  TY  LI G C  G  E A  L+  M +EG   NV TYN+++DG CK+G +++A 
Sbjct: 374 LAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAY 433

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            V       G++ + VT++ LI   CK   I  A+ L+ +MV   + PD+  +T LI   
Sbjct: 434 KVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVF 493

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            ++  MKE+   ++E +   + P+  T +S+I G  + G +  AL FF   +D      C
Sbjct: 494 CREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG----C 549

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + + + Y A+I  LC   ++ +A  L+  M    L P   T  T+
Sbjct: 550 ASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL 594



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 231/475 (48%), Gaps = 5/475 (1%)

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           G+     E   EM   GL     T   ++      G V  A NLFDEM  +G++P  V Y
Sbjct: 146 GRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSY 205

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            +++ G C    ++E++     M E G V +  T + ++  +C+   V RAL ++     
Sbjct: 206 RVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCE 265

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             L+PN++ F  +++GLCK G ++ A      M   G  PN++ +  LIDG CK G   +
Sbjct: 266 MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEK 325

Query: 278 AMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           A  L  ++ + E   P+V TY  +I G C   ++  AE LL +M ++G+  N  TY +LI
Sbjct: 326 AFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLI 385

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DG+CK G+ E+A  + + M E+G  PNV T+++++DG CK G +  A  +        L 
Sbjct: 386 DGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLD 445

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
            D V +T LI    K   +K+ L L+ +M+++ I P + + ++LI    +  R+  +  F
Sbjct: 446 ADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMF 505

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           F E           P +  Y ++I   C +G +  A K F  M       D+ TY  ++ 
Sbjct: 506 FEEAVRFG----LVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALIS 561

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           GL +  ++ +   L   MI+ G+ P  V    +   Y +  D  SA    E L++
Sbjct: 562 GLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEK 616



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 221/440 (50%), Gaps = 14/440 (3%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           +  S ++  F E G +  ALW +R+   + + P +     ++ GL K+G     +E  EE
Sbjct: 238 ATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEE 297

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNEN 168
           MV  G   +V T+  LID  C +G   KA  LF +++  +  +P V+ YT +I G C + 
Sbjct: 298 MVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDE 357

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           KM  AE +   M+E G+ PN  TY  L+DG+CK  +  RA E  + M      PNV T+ 
Sbjct: 358 KMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYN 417

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++DGLCK G ++ A        + G+  +   Y  LI  HCK   + +A+ L ++M K 
Sbjct: 418 AIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKS 477

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PD+ +Y  LI   C   +++ +E   ++  + G++    TY S+I GYC+EG++  A
Sbjct: 478 GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLA 537

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALID 407
           L    +M++ G   + +T+ +LI G CK   +D A  LY  M+ K L P +V   T   +
Sbjct: 538 LKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYE 597

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
               D      + L  E LE K+   V TV++L+  L    ++  A  FF +  DK    
Sbjct: 598 YCKIDDGCSAMVVL--ERLEKKLW--VRTVNTLVRKLCSERKVGMAALFFHKLLDKDP-- 651

Query: 468 YCSPNHVLYAAIIQALCYDG 487
             + N V  AA + A CY+ 
Sbjct: 652 --NVNRVTIAAFMTA-CYES 668



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 204/419 (48%), Gaps = 5/419 (1%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           +K  E    +   ++       ++ EA  M   M   G+ P+  T N ++    ++  V 
Sbjct: 125 NKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVE 184

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + EM    +QPN V++ V++ G CK+G +  +  +   M + G   +    + ++
Sbjct: 185 YAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIV 244

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
              C+ G +  A+       +  + P++  +  +I+GLC  G ++ A  +L++M   G  
Sbjct: 245 REFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWK 304

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            NV T+ +LIDG CK+G  EKA  +  ++   +  +PNV+T++++I G C+   ++ A  
Sbjct: 305 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEM 364

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L + M  + L P+   +T LIDG  K GN +    L   M E   +P+V T ++++ GL 
Sbjct: 365 LLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K GR+  A      K+   +G     + V Y  +I   C   +I +A  LF+ M    ++
Sbjct: 425 KKGRVQEAYKVL--KSGFRNG--LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQ 480

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD  +YTT++    R KRM +  M   + ++ G+VP       M+ GY   G+L+ A +
Sbjct: 481 PDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALK 539


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 246/522 (47%), Gaps = 36/522 (6%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           EI   N   +ST++        +E+A+   R  E   + P++ + N++++G  K G  D 
Sbjct: 194 EIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM 253

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              F+  ++ CGLV  V ++ +LI+  C  G + +AL L  +M   G+EP  V Y IL  
Sbjct: 254 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 313

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           G      +  A  + R M + G+ P++ TY  L+ G C++ +++  L    +ML    + 
Sbjct: 314 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 373

Query: 223 N-VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           N ++   V++ GLCK G +  A + F  M   G+ P++  Y+ +I G CK G    A+ L
Sbjct: 374 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 433

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             EM    I P+  T+  L+ GLC  G L  A  LL  +   G   ++V YN +IDGY K
Sbjct: 434 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 493

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G +E+AL +   + E G+ P+V TF+SLI G CK  NI  A  +   + +  L P VV 
Sbjct: 494 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 553

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+D  +  GN K    L +EM    I P+  T S +  GL +  +  N         
Sbjct: 554 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC-------- 605

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                     NHVL   I +         K  +   DM S+ + PD  TY T+++ L R 
Sbjct: 606 ----------NHVLRERIFE---------KCKQGLRDMESEGIPPDQITYNTIIQYLCRV 646

Query: 522 KRMLDVMMLLADMIKMGIVPDA-----VINQVMVRGYQENGD 558
           K +    + L  M    +   +     +I+ + V GY    D
Sbjct: 647 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 688



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 56/489 (11%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           K  +++ E+ DK  E T   Y+ ++ GLC + K+ +A    R+     + P++ ++N++M
Sbjct: 187 KMWDVYKEIKDKN-EHT---YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 242

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            GYCK+  V+ A  F+  +L   L P+V +  +L++GLC VG +  A      M K GV 
Sbjct: 243 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 302

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P+   YN L  G    G +  A  +  +M    +SPDV TY IL+ G C +G ++    L
Sbjct: 303 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 362

Query: 317 LQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+ M   G  L +++  + ++ G CK G +++ALS+ +QM   G+ P++V +S +I G C
Sbjct: 363 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 422

Query: 376 KAGNIDAAMGLYTEMVIKSLVP-----------------------------------DVV 400
           K G  D A+ LY EM  K ++P                                   D+V
Sbjct: 423 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 482

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++  +IDG +K G ++E L L+K ++E  ITPSV T +SLI+G  K   I+ A       
Sbjct: 483 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--- 539

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL-- 518
            D       +P+ V Y  ++ A    G      +L  +M+++ + P N TY+ + +GL  
Sbjct: 540 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 598

Query: 519 ----------LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
                     LR +        L DM   GI PD +    +++       L  AF   E 
Sbjct: 599 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 658

Query: 569 LKESRIGSS 577
           +K   + +S
Sbjct: 659 MKSRNLDAS 667



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 260/529 (49%), Gaps = 48/529 (9%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL-----------PAIQACNALLNGL 94
           +I  F  S FSTL+++     H+      +++++V+            A + C  L N  
Sbjct: 76  DIYAFRHSSFSTLLVS-----HVLAGQRRFKELQVILEQLLQEEGSGSASRLCELLSNSF 130

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K       WE        GLV D++ +            V  +L +  +M D+ +  + 
Sbjct: 131 RK-------WES------TGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVST 172

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y  +++     +KM +   +++ +++     N +TY+ ++DG C+   +  A+ F   
Sbjct: 173 QSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRT 225

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
               ++ P+VV+F  +M G CK+G +  A +FF  + K G+ P+++ +N LI+G C  G+
Sbjct: 226 SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS 285

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA+ L S+M K  + PD  TYNIL KG   +G + GA  +++ M  +G+  +V+TY  
Sbjct: 286 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 345

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPN-VVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           L+ G C+ G+++  L +   M  +G E N ++  S ++ G CK G ID A+ L+ +M   
Sbjct: 346 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 405

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L PD+V ++ +I GL K G     L LY EM + +I P+  T  +L+ GL + G +  A
Sbjct: 406 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 465

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
            +      D       + + VLY  +I      G I +A +LF  +    + P   T+ +
Sbjct: 466 RSLL----DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 521

Query: 514 MLRGLLRAKRMLDVMMLLADMIKM-GIVPDAVINQVMVRGYQENGDLKS 561
           ++ G  + + + +   +L D+IK+ G+ P  V    ++  Y   G+ KS
Sbjct: 522 LIYGYCKTQNIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNTKS 569



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 195/394 (49%), Gaps = 15/394 (3%)

Query: 56  STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           S ++    + G I+EAL ++ +++   + P + A + +++GL K GKFD     Y+EM  
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
             ++ +  T+G L+   C +G +++A +L D +I  G    +V+Y I+I G      + E
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
           A  +F+ + E G+ P++ T+N+L+ GYCK  ++  A +    +  + L P+VV++  LMD
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-----------NLFEAMSL 281
                G  ++       M   G+ P    Y+ +  G C+              +FE    
Sbjct: 560 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 619

Query: 282 -CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
              +ME   I PD  TYN +I+ LC V  L GA   L+ M    + A+  TYN LID  C
Sbjct: 620 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 679

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G + KA S    + E+ V  +   +++LI   C  G+ + A+ L+ +++ +     + 
Sbjct: 680 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 739

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            ++A+I+ L +   + E+   +  ML   I+P +
Sbjct: 740 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 773



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 12/389 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           L +I  C+ +L+GL K G+ D     + +M   GL  D+V Y ++I   C  G    AL 
Sbjct: 373 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 432

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L+DEM DK I P    +  L+ GLC +  ++EA S+  S+   G   ++  YN ++DGY 
Sbjct: 433 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 492

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K   +  ALE +  ++   + P+V TF  L+ G CK   +  A      +  +G+ P++ 
Sbjct: 493 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 552

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK- 319
            Y  L+D +   GN      L  EM+   I P   TY+++ KGLC   + E    +L++ 
Sbjct: 553 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER 612

Query: 320 -----------MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
                      M  EGI  + +TYN++I   C+   +  A      M  + ++ +  T++
Sbjct: 613 IFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 672

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
            LID  C  G I  A      +  +++      +T LI      G+ +  ++L+ ++L  
Sbjct: 673 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 732

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFF 457
               S+   S++I+ L +   ++ +  FF
Sbjct: 733 GFNVSIRDYSAVINRLCRRHLVNESKFFF 761



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 215/442 (48%), Gaps = 15/442 (3%)

Query: 131 GQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE-SMFRSMRECGVVPNL 189
           G G   +   L      K  E T +++ +L+  L +  +MV+    + + M++  +  + 
Sbjct: 115 GSGSASRLCELLSNSFRKW-ESTGLVWDMLLF-LSSRLRMVDDSLYILKKMKDQNLNVST 172

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +YN+++  +    + ++  + Y E+   N      T+  ++DGLC+  +L  A  F   
Sbjct: 173 QSYNSVLYHF---RETDKMWDVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRT 225

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
                + P++  +N ++ G+CK G +  A S    + K  + P V+++NILI GLC VG 
Sbjct: 226 SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS 285

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           +  A  L   M K G+  + VTYN L  G+   G +  A  V   M +KG+ P+V+T++ 
Sbjct: 286 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 345

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           L+ GQC+ GNID  + L  +M+ +   +  ++  + ++ GL K G + E L L+ +M   
Sbjct: 346 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 405

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            ++P +   S +IHGL K G+   AL  + E  DK       PN   + A++  LC  G 
Sbjct: 406 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR----ILPNSRTHGALLLGLCQKGM 461

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           +L+A  L   + S     D   Y  ++ G  ++  + + + L   +I+ GI P       
Sbjct: 462 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 521

Query: 549 MVRGYQENGDLKSAFRCSEFLK 570
           ++ GY +  ++  A +  + +K
Sbjct: 522 LIYGYCKTQNIAEARKILDVIK 543



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 17/382 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
            N ++    +P +  +S +I    ++G  + ALW+Y ++    +LP  +   ALL GL +
Sbjct: 399 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 458

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           KG         + ++  G   D+V Y ++ID     G + +AL LF  +I+ GI P+V  
Sbjct: 459 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 518

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           +  LI+G C    + EA  +   ++  G+ P++ +Y  LMD Y    +     E   EM 
Sbjct: 519 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 578

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH------------MAKFGVFPNIFVYNC 264
              + P  VT+ V+  GLC+  +     +                M   G+ P+   YN 
Sbjct: 579 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 638

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           +I   C+  +L  A      M+   +     TYNILI  LC  G +  A+  +  + ++ 
Sbjct: 639 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 698

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           +  +   Y +LI  +C +GD E A+ +  Q+  +G   ++  +S++I+  C+   ++ + 
Sbjct: 699 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESK 758

Query: 385 GLYTEMVIKSLVPDVVVFTALI 406
             +  M+ + + PD+ +   +I
Sbjct: 759 FFFCLMLSQGISPDLDICEVMI 780



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 44/299 (14%)

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           +  +YKE    N  TY++++DG C++  +E A+        K + P+VV+F+S++ G CK
Sbjct: 188 MWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 247

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G +D A   +  ++   LVP V     LI+GL   G++ E L L  +M +  + P   T
Sbjct: 248 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 307

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY-------------------- 476
            + L  G    G IS A     +  DK      SP+ + Y                    
Sbjct: 308 YNILAKGFHLLGMISGAWEVIRDMLDKG----LSPDVITYTILLCGQCQLGNIDMGLVLL 363

Query: 477 ----------------AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
                           + ++  LC  G+I +A  LF+ M++D L PD   Y+ ++ GL +
Sbjct: 364 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 423

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             +    + L  +M    I+P++  +  ++ G  + G L  A      L +S I S ET
Sbjct: 424 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGET 478



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 50/300 (16%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I  +++ G IEEAL +++   +  + P++   N+L+ G  K        +  + +
Sbjct: 483 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 542

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC----N 166
            L GL   VV+Y  L+D     G+      L  EM  +GI PT V Y+++  GLC    +
Sbjct: 543 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 602

Query: 167 EN-KMVEAESMF-------RSMRECGVVPNLYTYNA------------------------ 194
           EN   V  E +F       R M   G+ P+  TYN                         
Sbjct: 603 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 662

Query: 195 -----------LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
                      L+D  C    + +A  F + +   N+  +   +  L+   C  G+   A
Sbjct: 663 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 722

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
              F  +   G   +I  Y+ +I+  C+   + E+      M    ISPD+    ++IK 
Sbjct: 723 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 782


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 221/442 (50%), Gaps = 9/442 (2%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V ++  +++    +GD   A   +  +     KG +P ++ Y ++I  LC   ++  A  
Sbjct: 136 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            FR M      P+++TY+ LM+G CK   V+ A+    EM      PN VTF VL+D L 
Sbjct: 196 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 255

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G+L  A     +M   G  PN   YN LI G C  G L +A+SL  +M   +  P+  
Sbjct: 256 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 315

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  +I GL    + E    +L  M + G  AN   Y+SLI G  KEG  E A+ +  +M
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EKG +PNVV + + IDG C+    D A  +  EM+ K  +P+   +++L+ G  K G+ 
Sbjct: 376 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 435

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++ + ++KEM+   +  +V   S L++GL ++GR+  AL  +        G    P+ V 
Sbjct: 436 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML----GEGLKPDVVA 491

Query: 476 YAAIIQALCYDGQILKASKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           Y+++I+ LC  G + K  KLF +M  +    RPD  TY  +   L R   +   + LL  
Sbjct: 492 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNS 551

Query: 534 MIKMGIVPDAVINQVMVRGYQE 555
           M+  G  PD++   + +   +E
Sbjct: 552 MLDEGCDPDSLTCNIFLETLRE 573



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 219/439 (49%), Gaps = 5/439 (1%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKAL 139
            +++ N++LN +I++G F   ++FY  +      G   +++TY ++I   C  G + +A+
Sbjct: 135 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 194

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           + F EM  K   P V  Y+ L++GLC E ++ EA  +   M+  G +PN  T+N L+D  
Sbjct: 195 DTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL 254

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D++RA +    M      PN VT+  L+ GLC  G+L  A +    M      PN 
Sbjct: 255 SKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQ 314

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  +I+G  K     + + +   ME+     + + Y+ LI GL   G+ E A  L ++
Sbjct: 315 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 374

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M ++G   NVV Y + IDG C++   ++A  +  +M  KG  PN  T+SSL+ G  K G+
Sbjct: 375 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 434

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A+ ++ EM+ + +  +VV  + L++GL + G ++E L ++  ML   + P V   SS
Sbjct: 435 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL   G +   L  F E   +       P+ V Y  +  ALC    + +A  L + M
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEM--QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552

Query: 500 RSDNLRPDNCTYTTMLRGL 518
             +   PD+ T    L  L
Sbjct: 553 LDEGCDPDSLTCNIFLETL 571



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 232/470 (49%), Gaps = 27/470 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N ++  L K G+ D   + + EM L     DV TY  L++  C +  V +A+ L
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            DEM  +G  P  V + +LI  L     +  A  +  +M   G VPN  TYN L+ G C 
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++AL    +M+     PN VT+G +++GL K        +  + M + G   N ++
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G  K G    A+ L  EM +    P+V  Y   I GLC   + + AE +LQ+M 
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G L N  TY+SL+ G+ K+GD +KA+ V  +M  + +  NVV  S L++G C++G + 
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM--LEAKITPSVFTVSS 439
            A+ ++T M+ + L PDVV ++++I GL   G++ + L+L+ EM   E K  P V T + 
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL------CYDGQI---- 489
           L + L +   ++ A++      D+     C P+ +     ++ L        DG++    
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEG----CDPDSLTCNIFLETLRERINPPQDGRLFLDE 587

Query: 490 -----------LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
                      L A ++  +M    L P+  T++ +++   + KR+ + +
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 208 ALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM---AKFGVFPNIFVYN 263
           A+ F+H M +  + +  V +F  +++ + + G+   A  F++H+      G  PN+  YN
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 178

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I   CK G +  A+    EM     +PDVFTY+ L+ GLC   +++ A  LL +M  E
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G L N VT+N LID   K GD+ +A  +   M  KG  PN VT+++LI G C  G +D A
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L  +MV    VP+ V +  +I+GL K    ++ + +   M E     + +  SSLI G
Sbjct: 299 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 358

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           LFK G+  NA+  + E  +K     C PN V+Y A I  LC D +  +A  +  +M S  
Sbjct: 359 LFKEGKSENAVRLWKEMAEKG----CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             P+  TY+++++G  +       +++  +M+   +  + V   V++ G  E+G L+ A 
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 25/446 (5%)

Query: 51  NPSVF--STLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWE 105
           NP VF  STL+    +   ++EA+++  +++    LP     N L++ L K G      +
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M L G V + VTY  LI   C +G + KAL+L ++M+     P  V Y  +I+GL 
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +  +   +  SM E G   N Y Y++L+ G  K      A+  + EM     +PNVV
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +G  +DGLC+  +   A +    M   G  PN F Y+ L+ G  K G+  +A+ +  EM
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              ++  +V   ++L+ GLC  G+L  A  +   M  EG+  +VV Y+S+I G C  G +
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 505

Query: 346 EKALSVCSQM--TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +K L +  +M   E    P+VVT++ L +  C+  N+  A+ L   M+ +   PD +   
Sbjct: 506 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 565

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             ++ L +  N  +  RL+              +  L+  L K  R  +AL    E   +
Sbjct: 566 IFLETLRERINPPQDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLR 611

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQI 489
               +  P    ++ +IQ  C   +I
Sbjct: 612 ----FLPPEPSTWSRVIQRTCKPKRI 633



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 17/278 (6%)

Query: 296 TYNILIKGLCGVGQLEG-AEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           T  ILI   CG   L G A     +M  +      V ++NS+++   +EGD   A     
Sbjct: 101 TIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYL 160

Query: 354 QM---TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +     KG +PN++T++ +I   CK G ID A+  + EM +K+  PDV  ++ L++GL 
Sbjct: 161 HVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 220

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL----NFFLEKTDKTDG 466
           K+  + E + L  EM      P+  T + LI  L KNG +S A     N FL+       
Sbjct: 221 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKG------ 274

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN V Y  +I  LC  G++ KA  L   M S    P+  TY T++ GL++ +R  D
Sbjct: 275 --CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 332

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + +L  M + G   +  I   ++ G  + G  ++A R
Sbjct: 333 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 370



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 11/251 (4%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV-------VTFSSLID 372
           ++K   L+    ++SL        D +  LS+  Q+ +    P          TF  LI+
Sbjct: 16  LHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKS--RPQFGSYKLGDATFYRLIE 73

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKIT 431
               +        +   M  +  V    +F  +     K     E +  +  M  +    
Sbjct: 74  NYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCK 133

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            +V + +S+++ + + G  S A  F+L        G+  PN + Y  II+ALC  GQI +
Sbjct: 134 QTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF-QPNLLTYNLIIKALCKLGQIDR 192

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A   F +M   N  PD  TY+T++ GL + +R+ + + LL +M   G +P+ V   V++ 
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 252

Query: 552 GYQENGDLKSA 562
              +NGDL  A
Sbjct: 253 ALSKNGDLSRA 263



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 8/248 (3%)

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            T+  LI+ Y    +      V  +M  +G       F  +     KA     A+  +  
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125

Query: 390 MVIKSLVPDVV-VFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTVSSLIHGLF 445
           M         V  F ++++ + ++G+     + Y  +  A      P++ T + +I  L 
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G+I  A++ F E   K     C+P+   Y+ ++  LC + ++ +A  L  +M+++   
Sbjct: 186 KLGQIDRAVDTFREMPLKN----CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 241

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  T+  ++  L +   +     L+ +M   G VP+ V    ++ G    G L  A   
Sbjct: 242 PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 301

Query: 566 SEFLKESR 573
            E +  S+
Sbjct: 302 LEKMVSSK 309


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 214/421 (50%), Gaps = 6/421 (1%)

Query: 40  NALNS-LEIPKFNPSVFS--TLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNG 93
           NA  S L+   FNP   S    I    + G +EEA+ V+   + I V  +I   N++L G
Sbjct: 177 NAAKSFLDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRG 236

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            ++ G+ D VWE Y EMV   +VADV T G L+   C +  +    NL   +++ G+ P 
Sbjct: 237 SVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPR 296

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
              +  LI G C +        +  SM      P+++TY  +++G CK          + 
Sbjct: 297 NAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFK 356

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           ++      P+ V +  ++ GLC++  L  A   +  M + G  PN + YN +I G+ K G
Sbjct: 357 DLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIG 416

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           NL EA  +  EM          +YN++IKGLC  G+++ A  L ++M  +GIL N +TYN
Sbjct: 417 NLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYN 476

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +L+ G+CKEG + +  ++  ++ ++G++P+  +++ LID  C+ G++  A  L+ +M  +
Sbjct: 477 ALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNR 536

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            + P V     +I G  K G   E +     ML +K+ P   +  SLI  L +  R+ +A
Sbjct: 537 GMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDA 596

Query: 454 L 454
           L
Sbjct: 597 L 597



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 11/430 (2%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G   D  +  VL D     G    A +  D        P        I  LC    + EA
Sbjct: 155 GFSPDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLVEEA 211

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
            S+F  ++  GV  ++ T+N+++ G  +   ++   E Y EM+  ++  +V T G L+  
Sbjct: 212 ISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQA 271

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            C    +    N    + + GV P    +N LI G CK         L   M     +PD
Sbjct: 272 FCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPD 331

Query: 294 VFTYNILIKGLCGVGQLEGAEG--LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           +FTY  ++ GLC  G+  G EG  + + +   G   + V Y ++I G C+   +  A  +
Sbjct: 332 IFTYQEVVNGLCKGGK--GPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M +KG  PN  T++++I G  K GN++ A  +Y EM  K      V +  +I GL  
Sbjct: 390 WFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCS 449

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +KE   L++EM    I  +  T ++L+ G  K G+I    N   E  D+       P
Sbjct: 450 HGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQG----IQP 505

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           +   YA +I  LC +G +  A  L+ DM++  + P  CT+  M+ G  +    ++ M  L
Sbjct: 506 SAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWL 565

Query: 532 ADMIKMGIVP 541
             M++  + P
Sbjct: 566 TTMLRSKLRP 575



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 3/361 (0%)

Query: 58  LIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           L+ AF +   I +   + R++    V+P   A N L++G  K   +  V +    M+   
Sbjct: 268 LVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARN 327

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              D+ TY  +++  C  G   +   +F ++ D+G  P  V+YT +IHGLC    + +A 
Sbjct: 328 RAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDAR 387

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            ++  M + G +PN YTYNA++ GY K+ ++  A + Y EM         V++ V++ GL
Sbjct: 388 KLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGL 447

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C  G+++ A + F  M+  G+  N   YN L+ G CK G + E  +L  E+    I P  
Sbjct: 448 CSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSA 507

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +Y  LI  LC  G ++ A+ L   M   G+   V T++ +I G+CK+G   + +   + 
Sbjct: 508 ASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTT 567

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M    + P   +F SLI    +   +D A+ +   M+       + +  +L+  L +  +
Sbjct: 568 MLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNS 627

Query: 415 M 415
           +
Sbjct: 628 L 628



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 181/381 (47%), Gaps = 7/381 (1%)

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G  P+  + N L D   +    N A  F       N  P   +    +  LCK G + 
Sbjct: 153 QSGFSPDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLVE 209

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A + F  +   GV  +I  +N ++ G  +AG +     L  EM +  +  DV T   L+
Sbjct: 210 EAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLV 269

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           +  C   ++     LL+++ ++G++     +N LI G+CK+    +   +   M  +   
Sbjct: 270 QAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRA 329

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P++ T+  +++G CK G       ++ ++  +   PD V++T +I GL +   + +  +L
Sbjct: 330 PDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + EM++    P+ +T +++IHG FK G +  A   + E  DK   GY     V Y  +I+
Sbjct: 390 WFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDK---GY-GEKTVSYNVMIK 445

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            LC  G+I +A  LF +M    +  ++ TY  ++RG  +  ++++   LL +++  GI P
Sbjct: 446 GLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQP 505

Query: 542 DAVINQVMVRGYQENGDLKSA 562
            A     ++    + GD+++A
Sbjct: 506 SAASYAPLIDKLCQEGDMQNA 526



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 13/278 (4%)

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            SPD  + N+L   L   G    A+  L         A++  Y   I   CK G +E+A+
Sbjct: 156 FSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAY---IRCLCKGGLVEEAI 212

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           SV  Q+   GV  ++ T++S++ G  +AG ID    LY EMV  S+V DV     L+   
Sbjct: 213 SVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAF 272

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN---GRISNALNFFLEKTDKTDG 466
             +  + +   L + +LE  + P     + LI G  K+   GR+S+ L+  + +      
Sbjct: 273 CDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNR---- 328

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              +P+   Y  ++  LC  G+  +  ++F D++     PD   YTTM+ GL R K + D
Sbjct: 329 ---APDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGD 385

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              L  +MI+ G +P+      M+ GY + G+L+ A++
Sbjct: 386 ARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWK 423



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 7/216 (3%)

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           ++ G  P+  + + L D   +AG  +AA          +  P      A I  L K G +
Sbjct: 152 SQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLV 208

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           +E + ++ ++    +  S+ T +S++ G  + GRI      + E  + +     +  H +
Sbjct: 209 EEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESS---VVADVHTV 265

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
              ++QA C + +I     L   +  D + P N  +  ++ G  + K    V  LL  MI
Sbjct: 266 -GYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMI 324

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
                PD    Q +V G  + G     FR  + LK+
Sbjct: 325 ARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKD 360


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 232/457 (50%), Gaps = 5/457 (1%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           + G +       E MV  G   DV+    LI       ++ KA+ +  E+++K  +P V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  LI+G C  N++ +A  +   MR     P+  TYN ++   C    ++ AL+  +++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           L  N QP V+T+ +L++     G +  A      M   G+ P++F YN +I G CK G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  +   +E     PDV +YNIL++ L   G+ E  E L+ KM+ E    NVVTY+ L
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C++G +E+A+++   M EKG+ P+  ++  LI   C+ G +D A+     M+    
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           +PD+V +  ++  L K+G   + L ++ ++ E   +P+  + +++   L+ +G    AL+
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
             LE    ++G    P+ + Y ++I  LC +G + +A +L  DMRS    P   TY  +L
Sbjct: 460 MILEMM--SNG--IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            G  +A R+ D + +L  M+  G  P+     V++ G
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
           +NP V   + LI  F  + +I +A+ V   +E    P + A NAL+NG  K  + D    
Sbjct: 120 YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATR 179

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M       D VTY ++I   C +G +  AL + ++++    +PTV+ YTILI    
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E  + EA  +   M   G+ P+++TYN ++ G CK   V+RA E    +     +P+V+
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVI 299

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+  L   G+          M      PN+  Y+ LI   C+ G + EAM+L   M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  ++PD ++Y+ LI   C  G+L+ A   L+ M  +G L ++V YN+++   CK G  
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL +  ++ E G  PN  +++++      +G+   A+ +  EM+   + PD + + ++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L ++G + E   L  +M   +  PSV T + ++ G  K  RI +A+N      +   
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL----ESMV 535

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           G  C PN   Y  +I+ + + G   +A +L +D+
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 9/459 (1%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C  G+ +++L+L + M+ KG  P V++ T LI G      + +A  +   + + G  P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           + YNAL++G+CK+  ++ A      M   +  P+ VT+ +++  LC  G+L  A      
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +      P +  Y  LI+     G + EA+ L  EM    + PD+FTYN +I+G+C  G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  +++ +  +G   +V++YN L+     +G  E+   + ++M  +  +PNVVT+S 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           LI   C+ G I+ AM L   M  K L PD   +  LI    ++G +   +   + M+   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P +   ++++  L KNG+   AL  F     K     CSPN   Y  +  AL   G  
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF----GKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
           ++A  +  +M S+ + PD  TY +M+  L R   + +   LL DM      P  V   ++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 550 VRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
           + G+ +   ++ A      + ES +G+      TT + L
Sbjct: 515 LLGFCKAHRIEDAIN----VLESMVGNGCRPNETTYTVL 549



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 5/355 (1%)

Query: 42  LNSLEIPKFNPSVFSTLIIAFSEM--GHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
           LN L      P+V +  I+  + M  G ++EAL +  ++    + P +   N ++ G+ K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
           +G  D  +E    + L G   DV++Y +L+     QG   +   L  +M  +  +P VV 
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ILI  LC + K+ EA ++ + M+E G+ P+ Y+Y+ L+  +C+   ++ A+EF   M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
                P++V +  ++  LCK G+   A   F  + + G  PN   YN +      +G+  
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
            A+ +  EM    I PD  TYN +I  LC  G ++ A  LL  M       +VVTYN ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
            G+CK   +E A++V   M   G  PN  T++ LI+G   AG    AM L  ++V
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 5/246 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
           K +P+V  +S LI      G IEEA+ + + ++   + P   + + L+    ++G+ D  
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
            EF E M+  G + D+V Y  ++   C  G   +AL +F ++ + G  P    Y  +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           L +    + A  M   M   G+ P+  TYN+++   C+   V+ A E   +M      P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           VVT+ +++ G CK   +  A N    M   G  PN   Y  LI+G   AG   EAM L +
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567

Query: 284 EMEKFE 289
           ++ + +
Sbjct: 568 DLVRID 573


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 241/474 (50%), Gaps = 8/474 (1%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI-EVLPAIQAC-NALLNGLIKKGKFDSVWEFY 107
            N   ++  +    + G IE+A    R + E L + Q   + L+  LI+ G+ D   E  
Sbjct: 303 LNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEAC 362

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            E+    +     T   +I   C  G V  AL+L + MI +G  P +  +++LI+ LC  
Sbjct: 363 LEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA 422

Query: 168 NKMVEAESMFRSMRE--CGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-HHNLQPNV 224
           +K+ EA+   + M         + ++YN+L++  CK   V++A   +  M+   +  P+V
Sbjct: 423 DKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDV 482

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V++ +L+DG CK+ EL  A   +  M      PN+  YN  ++G  + G + +A  +  E
Sbjct: 483 VSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE 542

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M     SPDV TY+ LI G     + + A  L + M   G   N VTYN L+ G CKE  
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
            ++A  +  +M E+G +P+ VT+++L+ G C  G I+ A+ ++ EMV K   PDVV +  
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 662

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           L+ G  + G   E  +L++ M+  +  P   + + +I GL K  R+ +A+  F E+ ++ 
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVF-ERMEQD 721

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
            G  CSP+ V Y ++I  LC + ++ +A K+F ++    L PD   +  +L  +
Sbjct: 722 HG--CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 260/588 (44%), Gaps = 104/588 (17%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N LL+ LI+        + +E+MV  G+V +  TY VL+   C + +  +A+  F EM+D
Sbjct: 133 NCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVD 192

Query: 148 KGIEPTVVIYT-----------------------------------ILIHGLCNENKMVE 172
           KG +P+  +Y                                     L+     ++K +E
Sbjct: 193 KGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIE 252

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLM 231
           A  +FR+M + G  P+   Y+ ++  +CK+ +++ A + + EM   +  P N V +   +
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFL 312

Query: 232 DGLCKVGELRAA----------------------------------GNFFVHMAKFGVFP 257
            GLCK G++  A                                      + +A   + P
Sbjct: 313 SGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           +    + +I   CKAG +  A+SL   M K    PD+ T+++LI  LC   +++ A+  L
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432

Query: 318 QKMYKE--GILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDGQ 374
           Q M ++     ++  +YNSL++  CK   + +A ++ S M +E+   P+VV++S LIDG 
Sbjct: 433 QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGF 492

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   +  A  LY +M+  + VP+V  + A ++GL + G + +   +Y+EM+ A  +P V
Sbjct: 493 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDV 552

Query: 435 FTVSSLIHG------------LFK---------NGRISNALNFFLEKTDKTDGGY----- 468
            T S+LIHG            LF+         N    N L   L K  K D  +     
Sbjct: 553 ITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612

Query: 469 -----CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C P+ V Y  ++   C  G+I +A ++F +M S    PD   Y  +L+G  RA +
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             +   L   M+     PD V + +M+ G  +   L  A    E +++
Sbjct: 673 PGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 240/502 (47%), Gaps = 13/502 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ----ACNALLNGLIKKGKFDSVW 104
           K + +++S +++A  ++ +++EA  ++ ++ V         A  A L+GL K GK +  +
Sbjct: 266 KPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAF 325

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E    M    L +    Y +LI      G + KA     E+  + I+P+      +I  L
Sbjct: 326 EACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH--NLQP 222
           C   ++  A S+  +M + G  P++ T++ L++  CK   +  A EF   M     +   
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSS 444

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSL 281
           +  ++  L++ LCK  ++  A   F  M     F P++  Y+ LIDG CK   L  A  L
Sbjct: 445 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL 504

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
             +M      P+V TYN  + GL   G++  A+G+ ++M   G   +V+TY++LI G+  
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
               ++A  +   M  +G  PN VT++ L+ G CK    D A  L+ +MV +   PD V 
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVT 624

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           +T L+ G    G +++ + ++ EM+     P V   + L+ G F+ G+   A   F    
Sbjct: 625 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMV 684

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN-LRPDNCTYTTMLRGLLR 520
            +     C P+ V +  +I  L    ++  A ++F  M  D+   PD  TY +++ GL  
Sbjct: 685 SRQ----CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 740

Query: 521 AKRMLDVMMLLADMIKMGIVPD 542
            +R+ + M +  ++ ++ + PD
Sbjct: 741 EQRLSEAMKVFKEIDRLKLSPD 762



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 222/519 (42%), Gaps = 79/519 (15%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DV TY  L+D      D+ +A  +F++M+ +G+ P    Y +L+   C E    EA   F
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 178 RSMRECGVVPNLYTYNAL---MDGYCKVADVNR--------------------------- 207
             M + G  P+   Y  +   +    K  + +R                           
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247

Query: 208 -----ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP-NIFV 261
                A + +  M+    +P+   +  ++   CK+  L  A   F+ MA     P N   
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +   + G CK+G + +A   C  M++  +S     Y++LI+ L   G+++ AE    ++ 
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT--------------- 366
              I  +  T +S+I   CK G ++ ALS+   M ++G  P++ T               
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426

Query: 367 ----------------------FSSLIDGQCKAGNIDAAMGLYTEMVI-KSLVPDVVVFT 403
                                 ++SL++  CKA  +  A  +++ MV  +S VPDVV ++
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LIDG  K   +    +LYK+M++    P+V T ++ ++GL + GRI++A   + E    
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV-- 544

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                CSP+ + Y+ +I       +  +A +LF  M S   RP+  TY  +L GL +  +
Sbjct: 545 --AAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +   L   M++ G  PD V    ++ G+   G ++ A
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 201/459 (43%), Gaps = 44/459 (9%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D  +AL  F  +  +  +  V  Y  L+  L     + +A  +F  M   GVVPN +TY 
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG-------------EL 240
            L+   C   + + A+ F+ EM+    +P+   +  + + L   G             E 
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK 228

Query: 241 RA----------------------AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           R                       A   F  M K G  P+  +Y+ ++  HCK  NL EA
Sbjct: 229 RVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA 288

Query: 279 MSLCSEMEKFEISP-DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
             L  EM     +P +   +   + GLC  G++E A    + M +E + ++   Y+ LI 
Sbjct: 289 FKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIR 347

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
              + G ++KA   C ++  + ++P+  T  S+I   CKAG +D+A+ L   M+ +   P
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV---SSLIHGLFKNGRISNAL 454
           D+   + LI+ L K   ++E     + M + KI+    +    +SL++ L K  ++  A 
Sbjct: 408 DMATHSMLINELCKADKIQEAQEFLQGM-DRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F   T  ++  +  P+ V Y+ +I   C   ++ +A KL+  M   N  P+  TY   
Sbjct: 467 AIF--STMVSERSFV-PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 523

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           L GL+R  R+ D   +  +M+  G  PD +    ++ G+
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGF 562


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 228/458 (49%), Gaps = 11/458 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +  ++ + ++ G + +AL V+  ++    +P++   N L+N     G+F    + ++ M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 111 VLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
                V  D  TY  LI   C  G+   A  L  EM DK I   V  Y+ +I  L  E K
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             E+  +   M   G  P+++ +N +M G+ +  ++ +A E Y  M+    +P+ V++ +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 230 LMDGLCKVGELRAAGNFFVHMA--KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           L+ GL K+G+L  +      MA    G  PN+  ++ LI G C+ G L +A+ +   M +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               P+ +TY  LI GLC   ++  A  L +KM +  I  + V YNSLI GYCK G M++
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 348 ALSVCSQMT-EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           A  +  +M+   G++P +VTF++LIDG CK G +  A  L  EM  K L  D   +  LI
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
            GLS+   + E L +YK+M E K      +  S + GL K G I  A   F E T K+  
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF-EATRKSGA 430

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
               PN   +  + ++L   G++  A KL    ++ ++
Sbjct: 431 ---VPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 193/384 (50%), Gaps = 6/384 (1%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G+ E A   L   R   +   +   ++++  L+K+ K +  ++  EEM
Sbjct: 83  TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   DV  +  ++       ++ KA  ++  M++ G +P  V Y ILIHGL    K+
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202

Query: 171 VEAESMFR--SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            E+  +    +MR  G VPN+ T++ L+ G C+  ++ +ALE +  ML    +PN  T+ 
Sbjct: 203 DESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 262

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+ GLC+  ++  A   F  M +  + P+   YN LI G+CK G++ EA  L  EM   
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322

Query: 289 E-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P + T+N LI G C +G+L  A  L+ +M  +G+ A+  TY  LI G  +   +++
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL V  QM EK    + V+  S + G CK GNID A  ++        VP+   F  L +
Sbjct: 383 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 442

Query: 408 GLSKDGNMKETLRLYKEMLEAKIT 431
            L K G +++  +L +      IT
Sbjct: 443 SLIKLGRVEDAQKLMEPAKARDIT 466



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            Y+ ++    K   + +ALE +  M   +  P++VT+ VL++  C  GE   A + F  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 251 AKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
            +   V P+ + YN LI G C +GN   A  L SEM    I+ +VFTY+ +IK L    +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
            E +  +L++M   G   +V  +N ++ G+ +  +MEKA  V   M E G +P+ V++  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           LI G  K G +D ++ + +EM +++   VP+V+ F+ LI GL + G +++ L ++  MLE
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A   P+ +T ++LI GL +  ++  A   F    +K       P+ V Y ++I   C  G
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELF----EKMTQACIPPDAVAYNSLIAGYCKRG 307

Query: 488 QILKASKLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
            + +A KL+ +M     L+P   T+ T++ G  +  ++     L+A+M   G+  D    
Sbjct: 308 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTY 367

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESR 573
           ++++ G      L  A    + ++E +
Sbjct: 368 RILIAGLSRATKLDEALEVYKQMREKK 394



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 170/342 (49%), Gaps = 6/342 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I +  +    EE+  V  ++      P + A N ++ G  +    +   E Y
Sbjct: 115 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 174

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK--GIEPTVVIYTILIHGLC 165
           + MV  G   D V+Y +LI      G + ++L +  EM  +  G  P V+ ++ LIHGLC
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC 234

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++ +A  +F SM E G  PN YTY  L+ G C+   V +A E + +M    + P+ V
Sbjct: 235 RTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            +  L+ G CK G +  A   +  M+   G+ P I  +N LIDG CK G L  A  L +E
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M    ++ D  TY ILI GL    +L+ A  + ++M ++  L + V+  S + G CK G+
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 414

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
           +++A +V     + G  PN  TF  L +   K G ++ A  L
Sbjct: 415 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 12/337 (3%)

Query: 20  DVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRK 77
            + ++L+K  KP       +  L  +     NP VF+   ++  F+   ++E+A  VY+ 
Sbjct: 121 SIIKSLVKEAKPEES----YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQH 176

Query: 78  I---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL--CGLVADVVTYGVLIDCCCGQ 132
           +      P   + + L++GL K GK D   +   EM +   G V +V+T+  LI   C  
Sbjct: 177 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRT 236

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G++ KAL +F  M++ G +P    YT LI GLC   K+++A  +F  M +  + P+   Y
Sbjct: 237 GELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAY 296

Query: 193 NALMDGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           N+L+ GYCK   ++ A + Y EM     LQP +VTF  L+DG CK+G+L  A      M 
Sbjct: 297 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 356

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
             G+  +   Y  LI G  +A  L EA+ +  +M + +   D  +    + GLC  G ++
Sbjct: 357 TKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNID 416

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            A  + +   K G + N  T+  L +   K G +E A
Sbjct: 417 QAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 221/458 (48%), Gaps = 12/458 (2%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           A+  C AL+  L   G+           VL     DV+ Y  ++   CG G +  A  L 
Sbjct: 103 AVGPCAALIKKLCASGRTADARR-----VLAASGPDVMVYNAMVAGYCGAGQLDAARRLV 157

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
            +M    +EP    Y  LI GLC   +   A ++   M   G +P++ TY  L++  CK 
Sbjct: 158 ADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKR 214

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
           +   +A++   EM      P++VT+ V+++G+C+ G +  A  F  ++  +G  PN   Y
Sbjct: 215 SGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSY 274

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N ++ G   A    +A  L  EM      P+V T+N+LI  LC  G +E A  +L++M +
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G   N ++YN L+  +CK+  + KA+     M  +G  P++V++++L+   C+ G +D 
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+ L  ++  K   P ++ +  +IDGL+K G  KE L L  EM    + P + T S++  
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL +  RI  A+  F +  D        P   LY AI+  LC   +   A  LF+ M S 
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMG----IRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
              P+  TYT ++ GL     + +   L A +   G+V
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 207/406 (50%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           V++ ++  +   G ++ A  +   + V P     N L+ GL  +G+  +     E+M   
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRR 195

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G + DVVTY +L++  C +    +A+ L DEM DKG  P +V Y ++++G+C E ++ +A
Sbjct: 196 GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDA 255

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
               +++   G  PN  +YN ++ G         A +   EM H    PNVVTF +L+  
Sbjct: 256 MEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G +  A      M ++G  PN   YN L+   CK   + +AM     M      PD
Sbjct: 316 LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPD 375

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           + +YN L+  LC  G+++ A  LL ++  +G    +++YN++IDG  K G  ++AL +  
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +MT KG++P+++T+S++  G C+   I+ A+  + ++    + P   ++ A++ GL K  
Sbjct: 436 EMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR 495

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
                + L+  M+ +   P+  T + L+ GL   G +  A   F +
Sbjct: 496 ETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 222/476 (46%), Gaps = 18/476 (3%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGL----VADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           L  L+++G+ D      +   L GL     A V     LI   C  G    A  +     
Sbjct: 74  LRVLVRRGELDDALRLVDS--LAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL---- 127

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
                P V++Y  ++ G C   ++  A  +   M    V P+ YTYN L+ G C     +
Sbjct: 128 -AASGPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTS 183

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            AL    +M      P+VVT+ +L++  CK    + A      M   G  P+I  YN ++
Sbjct: 184 NALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVL 243

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G C+ G + +AM     +  +   P+  +YNI++KGL    + E AE L+++M  +G  
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCP 303

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            NVVT+N LI   C+ G +E A+ V  QM + G  PN ++++ L+   CK   I  AM  
Sbjct: 304 PNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
              MV +   PD+V +  L+  L ++G +   + L  ++ +   +P + + +++I GL K
Sbjct: 364 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTK 423

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            G+   AL    E T K       P+ + Y+ I   LC + +I +A + F  ++   +RP
Sbjct: 424 AGKTKEALELLDEMTSKG----LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP 479

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
               Y  +L GL + +   + + L A MI  G +P+     ++V G    G +K A
Sbjct: 480 TAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 3/375 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI      G    AL V   +     LP +     LL    K+  +    +  +EM
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+VTY V+++  C +G V  A+     +   G EP  V Y I++ GL    + 
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE +   M   G  PN+ T+N L+   C+   V  A+E   +M  +   PN +++  L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK  ++  A  F   M   G +P+I  YN L+   C+ G +  A+ L  +++    
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SP + +YN +I GL   G+ + A  LL +M  +G+  +++TY+++  G C+E  +E+A+ 
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
              ++ + G+ P    +++++ G CK      A+ L+  M+    +P+   +T L++GL+
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527

Query: 411 KDGNMKETLRLYKEM 425
            +G +KE   L+ ++
Sbjct: 528 YEGLVKEARELFAQL 542



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 44/371 (11%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++ VYN ++ G+C AG L  A  L ++M    + PD +TYN LI+GLCG G+   A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M++ G L +VVTY  L++  CK    ++A+ +  +M +KG  P++VT++ +++G C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 377 AGNIDAAM-----------------------GLYT------------EMVIKSLVPDVVV 401
            G ++ AM                       GL+T            EM  K   P+VV 
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
           F  LI  L + G ++  + + ++M +   TP+  + + L+H   K  +I  A+ F     
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
            +     C P+ V Y  ++ ALC +G++  A +L   ++     P   +Y T++ GL +A
Sbjct: 369 SRG----CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 522 KRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
            +  + + LL +M   G+ PD +    +  G      ++ A R   F K   +G   T  
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR--TFCKVQDMGIRPTAA 482

Query: 582 HTTRSFLGHLK 592
                 LG  K
Sbjct: 483 LYNAILLGLCK 493



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 149/310 (48%), Gaps = 3/310 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ ++    + G +E+A+   + +      P   + N +L GL    +++   +  EEM
Sbjct: 238 TYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   +VVT+ +LI   C +G V  A+ + ++M   G  P  + Y  L+H  C + K+
Sbjct: 298 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A      M   G  P++ +YN L+   C+  +V+ A+E  H++      P ++++  +
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTV 417

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGL K G+ + A      M   G+ P+I  Y+ +  G C+   + EA+    +++   I
Sbjct: 418 IDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGI 477

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P    YN ++ GLC   +   A  L   M   G + N  TY  L++G   EG +++A  
Sbjct: 478 RPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARE 537

Query: 351 VCSQMTEKGV 360
           + +Q+  +GV
Sbjct: 538 LFAQLCSRGV 547



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 117/245 (47%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N L++ L ++G  +   E  E+M   G   + ++Y  L+   C Q  + KA+  
Sbjct: 304 PNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            + M+ +G  P +V Y  L+  LC   ++  A  +   +++ G  P L +YN ++DG  K
Sbjct: 364 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTK 423

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                 ALE   EM    LQP+++T+  +  GLC+   +  A   F  +   G+ P   +
Sbjct: 424 AGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAAL 483

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN ++ G CK      A+ L + M      P+  TY IL++GL   G ++ A  L  ++ 
Sbjct: 484 YNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLC 543

Query: 322 KEGIL 326
             G++
Sbjct: 544 SRGVV 548


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 221/442 (50%), Gaps = 9/442 (2%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAES 175
           V ++  +++    +GD   A   +  +     KG +P ++ Y ++I  LC   ++  A  
Sbjct: 160 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
            FR M      P+++TY+ LM+G CK   V+ A+    EM      PN VTF VL+D L 
Sbjct: 220 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 279

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G+L  A     +M   G  PN   YN LI G C  G L +A+SL  +M   +  P+  
Sbjct: 280 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 339

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY  +I GL    + E    +L  M + G  AN   Y+SLI G  KEG  E A+ +  +M
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            EKG +PNVV + + IDG C+    D A  +  EM+ K  +P+   +++L+ G  K G+ 
Sbjct: 400 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 459

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           ++ + ++KEM+   +  +V   S L++GL ++GR+  AL  +        G    P+ V 
Sbjct: 460 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML----GEGLKPDVVA 515

Query: 476 YAAIIQALCYDGQILKASKLFSDM--RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           Y+++I+ LC  G + K  KLF +M  +    RPD  TY  +   L R   +   + LL  
Sbjct: 516 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNS 575

Query: 534 MIKMGIVPDAVINQVMVRGYQE 555
           M+  G  PD++   + +   +E
Sbjct: 576 MLDEGCDPDSLTCNIFLETLRE 597



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 219/439 (49%), Gaps = 5/439 (1%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKAL 139
            +++ N++LN +I++G F   ++FY  +      G   +++TY ++I   C  G + +A+
Sbjct: 159 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAV 218

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           + F EM  K   P V  Y+ L++GLC E ++ EA  +   M+  G +PN  T+N L+D  
Sbjct: 219 DTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL 278

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D++RA +    M      PN VT+  L+ GLC  G+L  A +    M      PN 
Sbjct: 279 SKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQ 338

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  +I+G  K     + + +   ME+     + + Y+ LI GL   G+ E A  L ++
Sbjct: 339 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 398

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M ++G   NVV Y + IDG C++   ++A  +  +M  KG  PN  T+SSL+ G  K G+
Sbjct: 399 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 458

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A+ ++ EM+ + +  +VV  + L++GL + G ++E L ++  ML   + P V   SS
Sbjct: 459 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 518

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I GL   G +   L  F E   +       P+ V Y  +  ALC    + +A  L + M
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEM--QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576

Query: 500 RSDNLRPDNCTYTTMLRGL 518
             +   PD+ T    L  L
Sbjct: 577 LDEGCDPDSLTCNIFLETL 595



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 232/470 (49%), Gaps = 27/470 (5%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N ++  L K G+ D   + + EM L     DV TY  L++  C +  V +A+ L
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            DEM  +G  P  V + +LI  L     +  A  +  +M   G VPN  TYN L+ G C 
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++AL    +M+     PN VT+G +++GL K        +  + M + G   N ++
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G  K G    A+ L  EM +    P+V  Y   I GLC   + + AE +LQ+M 
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G L N  TY+SL+ G+ K+GD +KA+ V  +M  + +  NVV  S L++G C++G + 
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM--LEAKITPSVFTVSS 439
            A+ ++T M+ + L PDVV ++++I GL   G++ + L+L+ EM   E K  P V T + 
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL------CYDGQI---- 489
           L + L +   ++ A++      D+     C P+ +     ++ L        DG++    
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEG----CDPDSLTCNIFLETLRERINPPQDGRLFLDE 611

Query: 490 -----------LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
                      L A ++  +M    L P+  T++ +++   + KR+ + +
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 208 ALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM---AKFGVFPNIFVYN 263
           A+ F+H M +  + +  V +F  +++ + + G+   A  F++H+      G  PN+  YN
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 202

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I   CK G +  A+    EM     +PDVFTY+ L+ GLC   +++ A  LL +M  E
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G L N VT+N LID   K GD+ +A  +   M  KG  PN VT+++LI G C  G +D A
Sbjct: 263 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 322

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L  +MV    VP+ V +  +I+GL K    ++ + +   M E     + +  SSLI G
Sbjct: 323 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 382

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           LFK G+  NA+  + E  +K     C PN V+Y A I  LC D +  +A  +  +M S  
Sbjct: 383 LFKEGKSENAVRLWKEMAEKG----CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             P+  TY+++++G  +       +++  +M+   +  + V   V++ G  E+G L+ A 
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 25/446 (5%)

Query: 51  NPSVF--STLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWE 105
           NP VF  STL+    +   ++EA+++  +++    LP     N L++ L K G      +
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M L G V + VTY  LI   C +G + KAL+L ++M+     P  V Y  +I+GL 
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            + +  +   +  SM E G   N Y Y++L+ G  K      A+  + EM     +PNVV
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +G  +DGLC+  +   A +    M   G  PN F Y+ L+ G  K G+  +A+ +  EM
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
              ++  +V   ++L+ GLC  G+L  A  +   M  EG+  +VV Y+S+I G C  G +
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 529

Query: 346 EKALSVCSQM--TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           +K L +  +M   E    P+VVT++ L +  C+  N+  A+ L   M+ +   PD +   
Sbjct: 530 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 589

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             ++ L +  N  +  RL+              +  L+  L K  R  +AL    E   +
Sbjct: 590 IFLETLRERINPPQDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLR 635

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQI 489
               +  P    ++ +IQ  C   +I
Sbjct: 636 ----FLPPEPSTWSRVIQRTCKPKRI 657



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 17/278 (6%)

Query: 296 TYNILIKGLCGVGQLEG-AEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           T  ILI   CG   L G A     +M  +      V ++NS+++   +EGD   A     
Sbjct: 125 TIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYL 184

Query: 354 QM---TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
            +     KG +PN++T++ +I   CK G ID A+  + EM +K+  PDV  ++ L++GL 
Sbjct: 185 HVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 244

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL----NFFLEKTDKTDG 466
           K+  + E + L  EM      P+  T + LI  L KNG +S A     N FL+       
Sbjct: 245 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKG------ 298

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
             C PN V Y  +I  LC  G++ KA  L   M S    P+  TY T++ GL++ +R  D
Sbjct: 299 --CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 356

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            + +L  M + G   +  I   ++ G  + G  ++A R
Sbjct: 357 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 394



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 11/251 (4%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV-------VTFSSLID 372
           ++K   L+    ++SL        D +  LS+  Q+ +    P          TF  LI+
Sbjct: 40  LHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKS--RPQFGSYKLGDATFYRLIE 97

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML-EAKIT 431
               +        +   M  +  V    +F  +     K     E +  +  M  +    
Sbjct: 98  NYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCK 157

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            +V + +S+++ + + G  S A  F+L        G+  PN + Y  II+ALC  GQI +
Sbjct: 158 QTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF-QPNLLTYNLIIKALCKLGQIDR 216

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A   F +M   N  PD  TY+T++ GL + +R+ + + LL +M   G +P+ V   V++ 
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 276

Query: 552 GYQENGDLKSA 562
              +NGDL  A
Sbjct: 277 ALSKNGDLSRA 287



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 8/248 (3%)

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
            T+  LI+ Y    +      V  +M  +G       F  +     KA     A+  +  
Sbjct: 90  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149

Query: 390 MVIKSLVPDVV-VFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTVSSLIHGLF 445
           M         V  F ++++ + ++G+     + Y  +  A      P++ T + +I  L 
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K G+I  A++ F E   K     C+P+   Y+ ++  LC + ++ +A  L  +M+++   
Sbjct: 210 KLGQIDRAVDTFREMPLKN----CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 265

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           P+  T+  ++  L +   +     L+ +M   G VP+ V    ++ G    G L  A   
Sbjct: 266 PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 325

Query: 566 SEFLKESR 573
            E +  S+
Sbjct: 326 LEKMVSSK 333


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 242/498 (48%), Gaps = 15/498 (3%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV---LCGLVADVVTYGVLIDCCCGQG 133
           ++  +P + +C  LL GL  + +     E    M      G   DVV+Y  +I+    +G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           D  KA + + EM+D+ I P VV Y+ +I  LC    M +A  +  SM + GV+PN  TY 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHN-----LQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           ++M GYC       A+ F  ++         L+P++ T+  L+ G    G L        
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M + G+ P+ +VYN LI  + K G + EAM + S+M +  ++PD  TY  +I  LC  G
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++E A    ++M  EG+    + YNSLI G C     E+A  +  +M ++G+  N + F+
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 450

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           S+ID  CK G +  +  L+  MV   + PD++ ++ LIDG    G M E ++L   M+  
Sbjct: 451 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 510

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P+  T  +LI+G  K  R+ +AL  F E     +    SP+ + Y  I+Q L    +
Sbjct: 511 GLKPNTVTYRTLINGYCKISRMGDALVLFKE----MESSGVSPDIITYNIILQGLFQTRR 566

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
              A +L+  +     + +  TY  +L GL + K   D + +  ++  M +  +A    +
Sbjct: 567 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 626

Query: 549 MVRGY---QENGDLKSAF 563
           M+        NG+ K  F
Sbjct: 627 MIDALLKVGRNGEAKDLF 644



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 235/483 (48%), Gaps = 13/483 (2%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           +V P +     L+    +  + D  +     +V  G   + +T+  L+   C       A
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 139 LNL-FDEMIDKGIEPTVVIYTILIHGLCNENKMVEA---ESMFRSMRECGVVPNLYTYNA 194
           +++    M +    P V   TIL+ GLC+EN+  EA     M    R  G  P++ +Y  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           +++G+ K  D  +A   YHEML   + P+VVT+  ++  LCK   +  A      M K G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSE-----MEKFEISPDVFTYNILIKGLCGVGQ 309
           V PN   Y  ++ G+C +G   EA+    +     +E   + PD+ TY  L++G    G 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           L G   LL  M + GI  +   YN LI  Y K+G +++A+ V S+M ++G+ P+ VT+ +
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I   CK+G ++ AM  + +M+ + L P  +V+ +LI GL      +    L  EML+  
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           I  +    +S+I    K GR+  +   F    D        P+ + Y+ +I   C  G++
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLF----DLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
            +A KL S M S  L+P+  TY T++ G  +  RM D ++L  +M   G+ PD +   ++
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 550 VRG 552
           ++G
Sbjct: 558 LQG 560



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 231/459 (50%), Gaps = 16/459 (3%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +   V TY +LI CCC    +         ++ KG     + +T L+ G
Sbjct: 72  YNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--- 219
           LC + +  +A + + R M E   +P++++   L+ G C       ALE  H M       
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGG 191

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
             P+VV++  +++G  K G+   A + +  M    + P++  Y+ +I   CK   + +AM
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN-----VVTYNS 334
            + + M K  + P+  TY  ++ G C  GQ + A G L+K+  +G+  +     + TY +
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L+ GY  +G +    ++   M   G+ P+   ++ LI    K G +D AM ++++M  + 
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           L PD V + A+I  L K G +++ +  +++M++  ++P     +SLIHGL    +   A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
              LE  D+   G C  N + + +II + C +G+++++ KLF  M    ++PD  TY+T+
Sbjct: 432 ELILEMLDR---GIC-LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           + G   A +M + M LL+ M+ +G+ P+ V  + ++ GY
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGY 526



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 227/482 (47%), Gaps = 14/482 (2%)

Query: 49  KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
           + +P V  +S++I A  +   +++A+ V     K  V+P  +   ++++G    G+    
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEA 285

Query: 104 WEFYEEMVLCG-----LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
             F +++   G     L  D+ TY  L+     +G ++    L D M+  GI P   +Y 
Sbjct: 286 IGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYN 345

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
           ILI     + K+ EA  +F  MR+ G+ P+  TY A++   CK   V  A+ ++ +M+  
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            L P  + +  L+ GLC   +   A    + M   G+  N   +N +ID HCK G + E+
Sbjct: 406 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 465

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             L   M +  + PD+ TY+ LI G C  G+++ A  LL  M   G+  N VTY +LI+G
Sbjct: 466 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLING 525

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           YCK   M  AL +  +M   GV P+++T++ ++ G  +     AA  LY  +       +
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 585

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           +  +  ++ GL K+    + LR+++ +    +     T + +I  L K GR   A + F+
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFV 645

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
             +         PN+  Y  + + +   G + +  +LF  M  +    D+     ++R L
Sbjct: 646 AFSSNG----LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 701

Query: 519 LR 520
           L+
Sbjct: 702 LQ 703



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 185/370 (50%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+    K+GK D     + +M   GL  D VTYG +I   C  G V  A+  F++MID
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMID 404

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+ P  ++Y  LIHGLC  NK   AE +   M + G+  N   +N+++D +CK   V  
Sbjct: 405 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 464

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           + + +  M+   ++P+++T+  L+DG C  G++  A      M   G+ PN   Y  LI+
Sbjct: 465 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLIN 524

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK   + +A+ L  EME   +SPD+ TYNI+++GL    +   A+ L  ++ + G   
Sbjct: 525 GYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 584

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            + TYN ++ G CK    + AL +   +    ++    TF+ +ID   K G    A  L+
Sbjct: 585 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLF 644

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
                  LVP+   +  + + +   G ++E  +L+  M +   T     ++ ++  L + 
Sbjct: 645 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 704

Query: 448 GRISNALNFF 457
           G I+ A  + 
Sbjct: 705 GEITRAGTYL 714



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 27/398 (6%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR-----ALEFYHEMLHH---NLQPN 223
           +A  +F  +   G   ++Y  N  +      ADV R     A+  Y+ M       + P 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRAL------ADVARHSPAAAVSRYNRMARAGAGKVTPT 86

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC- 282
           V T+ +L+   C+   L        ++ K G       +  L+ G C      +AM +  
Sbjct: 87  VHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE---GILANVVTYNSLIDGY 339
             M +    PDVF+  IL+KGLC   + + A  L   M      G   +VV+Y ++I+G+
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGF 206

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            KEGD  KA S   +M ++ + P+VVT+SS+I   CK   +D AM + T MV   ++P+ 
Sbjct: 207 FKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNC 266

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKI-----TPSVFTVSSLIHGLFKNGRISNAL 454
             +T+++ G    G  KE +   K++    +      P + T  +L+ G    G +   +
Sbjct: 267 RTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALV-GM 325

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           +  L+   +       P+H +Y  +I A    G++ +A  +FS MR   L PD  TY  +
Sbjct: 326 HALLDLMVRNG---IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  L ++ R+ D M+    MI  G+ P  ++   ++ G
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 184/432 (42%), Gaps = 17/432 (3%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG---VVPNLYTYNA 194
           A ++FDE++ +G   ++      +  +   +    A S +  M   G   V P ++TY  
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYAI 92

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKF 253
           L+   C+   ++        ++    +   +TF  L+ GLC       A +  +  M + 
Sbjct: 93  LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE---ISPDVFTYNILIKGLCGVGQL 310
              P++F    L+ G C      EA+ L   M        +PDV +Y  +I G    G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A     +M    I  +VVTY+S+I   CK   M+KA+ V + M + GV PN  T++S+
Sbjct: 213 GKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSI 272

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKS-----LVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           + G C +G    A+G   ++         L PD+  +  L+ G +  G +     L   M
Sbjct: 273 MHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLM 332

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           +   I P  +  + LI    K G++  A+  F +   +      +P+ V Y A+I  LC 
Sbjct: 333 VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG----LNPDAVTYGAVIGILCK 388

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G++  A   F  M  + L P N  Y +++ GL    +      L+ +M+  GI  + + 
Sbjct: 389 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 448

Query: 546 NQVMVRGYQENG 557
              ++  + + G
Sbjct: 449 FNSIIDSHCKEG 460



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 161/363 (44%), Gaps = 40/363 (11%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
            NP    +  +I    + G +E+A+  + ++    + P     N+L++GL    K++   
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           E   EM+  G+  + + +  +ID  C +G V+++  LFD M+  G++P ++ Y+ LI G 
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C   KM EA  +   M   G+ PN  TY  L++GYCK++ +  AL  + EM    + P++
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------VFPN 258
           +T+ +++ GL +     AA   +V + + G                          +F N
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQN 611

Query: 259 I---------FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           +           +N +ID   K G   EA  L        + P+ +TY ++ + + G G 
Sbjct: 612 LCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 671

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           LE  + L   M   G   +    N ++    + G++ +A +  S + EK       T S 
Sbjct: 672 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 731

Query: 370 LID 372
            ID
Sbjct: 732 FID 734



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 9/275 (3%)

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
           E A  +  ++ + G  A++   N  +    +      A+S  ++M   G   V P V T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
           + LI   C+A  +D        +V K    + + FT L+ GL  D    + + +  + M 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P VF+ + L+ GL    R   AL       D   GG  +P+ V Y  +I     +
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGG-SAPDVVSYTTVINGFFKE 209

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G   KA   + +M    + PD  TY++++  L + + M   M +L  M+K G++P+    
Sbjct: 210 GDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTY 269

Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEG 581
             ++ GY  +G  K A     FLK+ R    E +G
Sbjct: 270 TSIMHGYCSSGQPKEAI---GFLKKVRSDGVEPDG 301



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 4/275 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +STLI  +   G ++EA+ +      + + P       L+NG  K  +       ++EM
Sbjct: 483 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM 542

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G+  D++TY +++           A  L+  + + G +  +  Y I++HGLC     
Sbjct: 543 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 602

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  MF+++    +     T+N ++D   KV     A + +     + L PN  T+ ++
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
            + +   G L      F+ M   G   +  + N ++    + G +  A +  S +++   
Sbjct: 663 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 722

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           S +  T ++ I  L G G+ +     L + YK  I
Sbjct: 723 SLEASTASLFIDLLSG-GKYQEYHRFLPEKYKSFI 756


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 258/555 (46%), Gaps = 61/555 (10%)

Query: 43  NSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGK 99
           ++++IP   P  FS LI A+++ G  E+A+  + K++     P +   N++L+ +++K  
Sbjct: 125 SNIQIP---PPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEV 181

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           F      Y +M+      +  T+ +L++  C  G    AL +FDEM  KGI P  +IYTI
Sbjct: 182 FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTI 241

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           ++ GLC   +  +   +  +M+  G  P+  T NAL+DG+CK+  ++ A           
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
               +  +  L+DGL +         +   M K G+ P++ +Y  LI G C+ G +  A+
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           ++ ++M +  +SPD + YN LIKG C VG L+ A  L  ++ K        TY  LI G 
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI------- 392
           C+ G +++A  + +QM   G  P+++TF++LIDG CKAG ++ A  L+ +M I       
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLF 481

Query: 393 ------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
                    V D      +++ L + G + +  +L  ++ ++ + P + T + LI+G  K
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCK 541

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
              I+ A   F E                                       ++     P
Sbjct: 542 AKNINGAFKLFRE---------------------------------------LQLKGHSP 562

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           D+ TY T++ G  R  R  D   +L  M+K G  P + + + ++      G L  AF  S
Sbjct: 563 DSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAF--S 620

Query: 567 EFLKESR-IGSSETE 580
            +LK  R + S E E
Sbjct: 621 LWLKYLRSLPSQEDE 635



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 222/459 (48%), Gaps = 19/459 (4%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           VT+ ++ID             + +E+ +  I+     +++LI          +A   F  
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           M++ G  P+++TYN+++    +      AL  Y++ML  N  PN  TF +L++GLCK G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
              A   F  M + G+ PN  +Y  ++ G C+A    +   L + M+     PD  T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           L+ G C +GQ++ A  LLQ   KEG +  +  Y+SLIDG  +    ++    C +M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
           +EP+VV ++ LI G C+ G +D A+ +  +M  + L PD   + ALI G    G + +  
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            L  E+ +    P+  T + LI G+ +NG +  A   F    ++ +   CSP+ + + A+
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF----NQMENLGCSPSIMTFNAL 452

Query: 480 IQALCYDGQILKASKLFSDMR--------------SDNLRPDNCTYTTMLRGLLRAKRML 525
           I  LC  G++ +A  LF  M               +D +  D  +  TM+  L  +  +L
Sbjct: 453 IDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVM-DTASLQTMVERLCESGLIL 511

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
               LL  +   G+VPD +   V++ G+ +  ++  AF+
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFK 550



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 236/500 (47%), Gaps = 59/500 (11%)

Query: 38  VFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLN 92
           V   LN++++    P   +   L+  F ++G I+EA   L ++ K   +  I+  ++L++
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL +  ++D V E+  +M   G+  DVV Y +LI   C  G V  ALN+ ++M  +G+ P
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
               Y  LI G C+   + +A S+   + +    P   TY  L+ G C+   ++ A + +
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV----------- 261
           ++M +    P+++TF  L+DGLCK GEL  A + F  M + G  P++F+           
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMD 493

Query: 262 ---YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
                 +++  C++G + +A  L  ++    + PD+ TYN+LI G C    + GA  L +
Sbjct: 494 TASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFR 553

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           ++  +G   + VTY +LIDG+ +    E A  V  QM + G  P+   +  L+   C+ G
Sbjct: 554 ELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKG 613

Query: 379 NIDAAMGLY--------------------------TEMVIKSLVP--------DVVVFTA 404
            +  A  L+                           E  ++ L+         ++  +T 
Sbjct: 614 KLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTI 673

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            + GL +    +E L+++  + E ++  +  +   LI+GL K+G +  A++ FL   +K 
Sbjct: 674 WLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEK- 732

Query: 465 DGGYCSP---NHVLYAAIIQ 481
            G    P   N +L + I+Q
Sbjct: 733 -GFMLMPRICNQLLRSLILQ 751



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 139/321 (43%), Gaps = 12/321 (3%)

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
           FF+   +   F +   +N +ID   K         +  E++   I     T+++LI    
Sbjct: 83  FFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYA 142

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G  E A     KM   G   +V TYNS++    ++     AL+V +QM +    PN  
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           TF  L++G CK G  D A+ ++ EM  K + P+ +++T ++ GL +     +  RL   M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNF--FLEKTDKTDG--GYCSPNHVLYAAIIQ 481
             +   P   T ++L+ G  K G+I  A       EK     G  GY S    L   + +
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS----LIDGLFR 318

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A  YD       K+F       + PD   YT ++RG      +   + +L DM + G+ P
Sbjct: 319 AKRYDEVQEWCRKMF----KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374

Query: 542 DAVINQVMVRGYQENGDLKSA 562
           D      +++G+ + G L  A
Sbjct: 375 DTYCYNALIKGFCDVGLLDKA 395



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 150/362 (41%), Gaps = 58/362 (16%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ LI      G ++EA  ++ ++E L   P+I   NAL++GL K G+ +     + +M
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 111 VL-------------CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
            +                V D  +   +++  C  G ++KA  L  ++ D G+ P ++ Y
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
            +LI+G C    +  A  +FR ++  G  P+  TY  L+DG+ +V     A     +M+ 
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK 592

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFV-------------------HMAK------ 252
           +   P+   +  LM   C+ G+L  A + ++                   H  K      
Sbjct: 593 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 652

Query: 253 -------------FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
                        F + P    Y   + G C+A    EA+ +   +++ ++  +  +  +
Sbjct: 653 VRCLLEMNFKLNNFEIAP----YTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVM 708

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI GLC  G LE A  +     ++G +      N L+     +  M+ AL + ++M   G
Sbjct: 709 LINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 768

Query: 360 VE 361
            +
Sbjct: 769 YD 770


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/516 (31%), Positives = 245/516 (47%), Gaps = 44/516 (8%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKAL 139
            P IQ  N L   + K   F +     + +   G  +ADV T  +LI+C C         
Sbjct: 73  FPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGF 132

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +   M   G+EPT+V    + +GLC                             +++G 
Sbjct: 133 AVLGLMTKIGLEPTLVTLNTIANGLC-----------------------------IVNGL 163

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+ D + ALE   +M+  NL+PNVV +  ++DGLCK G +  A   F  M    V PN+
Sbjct: 164 CKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNV 223

Query: 260 FVYNCLIDGHC-KAGNLFEAMSLCSEM--EKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
             YNCLI G C + G   E + L +EM  EK  I PDV T++IL+ G C  G L  AE +
Sbjct: 224 VTYNCLIQGLCGEVGGWREGVGLFNEMVAEK-GIVPDVQTFSILVNGFCKEGLLLRAESM 282

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNVVTFSSLIDGQ 374
           +  M + G+  NVVTYNSLI GYC    ME+A+ V   M  +G    P+VVT++SLI G 
Sbjct: 283 VGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGW 342

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK   ++ AM L +EMV K L PDV  +T+LI G  + G       L+  M +    P +
Sbjct: 343 CKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPIL 402

Query: 435 FTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            T + ++ GL+K    S A+  F  +EK+          + V+Y  ++  +C  G++  A
Sbjct: 403 QTCAVVLDGLYKCWLDSEAMTLFRAMEKSG------LDLDIVIYNIMLDGMCKMGKLNDA 456

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            KL S +    L+ D+ T+  M++GL R   + D   LL  M + G  P+     V V+G
Sbjct: 457 RKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQG 516

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
                D+  + +  + +K+       T       FL
Sbjct: 517 LLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFL 552



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 198/381 (51%), Gaps = 10/381 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKK--GKFDSVWE 105
           N  V++ ++    + G + EAL ++ ++ V+   P +   N L+ GL  +  G  + V  
Sbjct: 187 NVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGL 246

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F E +   G+V DV T+ +L++  C +G +++A ++   MI  G+E  VV Y  LI G C
Sbjct: 247 FNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306

Query: 166 NENKMVEAESMFRSM-REC-GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             N+M EA  +F  M RE  G +P++ TYN+L+ G+CKV  VN+A+    EM+   L P+
Sbjct: 307 LRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPD 366

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V T+  L+ G  +VG+  AA   F+ M   G  P +     ++DG  K     EAM+L  
Sbjct: 367 VFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFR 426

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            MEK  +  D+  YNI++ G+C +G+L  A  LL  +  +G+  +  T+N +I G C+EG
Sbjct: 427 AMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREG 486

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A  +  +M E G  PN  +++  + G  +  +I  +      M  K    D     
Sbjct: 487 LLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAE 546

Query: 404 ALIDGLS---KDGNMKETLRL 421
            LI  LS   +D   +E L++
Sbjct: 547 LLIRFLSANEEDNAFQEFLQI 567



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 193/390 (49%), Gaps = 7/390 (1%)

Query: 74  VYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ- 132
           V R +E  P +   NA+L+GL K+G        + EM +  +  +VVTY  LI   CG+ 
Sbjct: 180 VKRNLE--PNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEV 237

Query: 133 GDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
           G   + + LF+EM+ +KGI P V  ++IL++G C E  ++ AESM   M   GV  N+ T
Sbjct: 238 GGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVT 297

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHN--LQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
           YN+L+ GYC    +  A+  +  M+       P+VVT+  L+ G CKV ++  A +    
Sbjct: 298 YNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSE 357

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M   G+ P++F +  LI G  + G    A  L   M+     P + T  +++ GL     
Sbjct: 358 MVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWL 417

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A  L + M K G+  ++V YN ++DG CK G +  A  + S +  KG++ +  T++ 
Sbjct: 418 DSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNI 477

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G C+ G +D A  L  +M      P+   +   + GL +  ++  + R Y ++++ K
Sbjct: 478 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRS-RKYLQIMKDK 536

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             P   T + L+          NA   FL+
Sbjct: 537 GFPVDATTAELLIRFLSANEEDNAFQEFLQ 566



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIFV 261
           A V+ +++F+H ML  N  P +  F +L   + K      A +    +   G    ++  
Sbjct: 55  AAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCT 114

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI------LIKGLCGVGQLEGAEG 315
            N LI+  C+        ++   M K  + P + T N       ++ GLC +G   GA  
Sbjct: 115 LNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALE 174

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
            L+KM K  +  NVV YN+++DG CK G + +AL +  +M    VEPNVVT++ LI G C
Sbjct: 175 SLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLC 234

Query: 376 -KAGNIDAAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            + G     +GL+ EMV  K +VPDV  F+ L++G  K+G +     +   M+   +  +
Sbjct: 235 GEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELN 294

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T +SLI G     R+  A+  F     + +G  C P+ V Y ++I   C   ++ KA 
Sbjct: 295 VVTYNSLISGYCLRNRMEEAVRVFDLMVREGEG--CLPSVVTYNSLIHGWCKVKKVNKAM 352

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            L S+M    L PD  T+T+++ G     + L    L   M   G VP
Sbjct: 353 SLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVP 400


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 223/438 (50%), Gaps = 42/438 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKI-EV--LPAIQACNALLNGLIKKGKFDSVWEF 106
           ++P +F  L+ A+ + G I+E    + +I EV  +P++ ACN LLNGL+K       W  
Sbjct: 180 WDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHV 239

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           Y EM   G++ +  T+ +L    C  GD+ K  +  ++M ++G EP +V Y  LI+G C 
Sbjct: 240 YGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCG 299

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
             ++ +A  ++R M    V+P+L +Y ALM+G CK   V  A +  H M+H  L P+VV+
Sbjct: 300 RGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVS 359

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G CK G++  + +    M   G+FP+ F    LI G+ K G L  A++L  E+E
Sbjct: 360 YNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELE 419

Query: 287 KF--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           KF   ISPD++ Y  L+  LC   +   A+ LL++M + G + +V  YN LI+  CK   
Sbjct: 420 KFGVSISPDIYDY--LVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDC 477

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +  ALS+ +++    + PN++T+ +LI   C+ G    A  L  EM+   L PD  +  A
Sbjct: 478 VADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRA 537

Query: 405 LIDG-----------------------------------LSKDGNMKETLRLYKEMLEAK 429
           +I G                                   + +DG++ + + L + ML+  
Sbjct: 538 MIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVG 597

Query: 430 ITPSVFTVSSLIHGLFKN 447
             P+  T   +I GL KN
Sbjct: 598 FAPNSLTCKYMIDGLRKN 615



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 231/483 (47%), Gaps = 30/483 (6%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEA--------- 173
           VL+ C   Q D + AL  F+ +  D G++P+ + Y +++H L    +  +A         
Sbjct: 102 VLLRC---QSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELIL 158

Query: 174 ----------ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
                     + +F   ++C   P    ++ L+  Y K   +      + ++L     P+
Sbjct: 159 LVKDTDEDVFQCLFLCCQDCNWDP--IIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPS 216

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+    L++GL K   +    + +  M + GV PN + +N L    CK G++ +      
Sbjct: 217 VIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLE 276

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +ME+    PD+ TYN LI G CG G+L  A  L + MY+  +L ++V+Y +L++G CKEG
Sbjct: 277 KMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEG 336

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            + +A  +  +M  +G+ P+VV++++LI G CK G +  +  L  EM+   + PD     
Sbjct: 337 RVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCR 396

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI G  K+G +   L L  E+ +  ++ S      L+  L +  R   A    LE+  +
Sbjct: 397 VLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDR-PFAAKTLLERMSQ 455

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              GY  P+  +Y  +I++LC    +  A  L +++   N+ P+  TY  ++R L R  R
Sbjct: 456 R--GYI-PHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGR 512

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL-KSAFRCSEFLKESRIGSSETEGH 582
            ++   L+ +M+  G+ PD  I + M+ GY    D  K+      F KE +I  SE+   
Sbjct: 513 SIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYST 572

Query: 583 TTR 585
             R
Sbjct: 573 LVR 575



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 232/508 (45%), Gaps = 35/508 (6%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC--- 129
           WV   + + P+      +L+ L    +F+   +F  E++L     D   +  L  CC   
Sbjct: 119 WVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDC 178

Query: 130 --------------CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
                            G + +    F ++++ G  P+V+    L++GL   N +     
Sbjct: 179 NWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWH 238

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           ++  M   GV+PN YT+N L   +CK  D+++  +F  +M     +P++VT+  L++G C
Sbjct: 239 VYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYC 298

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
             G L  A   +  M +  V P++  Y  L++G CK G + EA  L   M    ++PDV 
Sbjct: 299 GRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVV 358

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +YN LI G C  G++  ++ LL +M   GI  +  T   LI GY KEG +  AL++  ++
Sbjct: 359 SYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVEL 418

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
            + GV  +   +  L+   C+     AA  L   M  +  +P V ++  LI+ L K   +
Sbjct: 419 EKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCV 478

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR-------ISNALNFFLEKTDKTDGGY 468
            + L L  E++   I P++ T  +LI  L + GR       +   L+F L+         
Sbjct: 479 ADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQ--------- 529

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
             P+  +  A+I   C +    KA  L      +    D+ +Y+T++R +     +   M
Sbjct: 530 --PDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFM 587

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQEN 556
            L   M+K+G  P+++  + M+ G ++N
Sbjct: 588 ELQERMLKVGFAPNSLTCKYMIDGLRKN 615


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 264/515 (51%), Gaps = 16/515 (3%)

Query: 61  AFSEMGHIEEALWVYRKIEVLP---AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
           A ++M H  +AL+V  K+  L    +I   ++LL  L K    D     ++EM  CG+  
Sbjct: 158 ARAQMNH--DALYVLSKMNSLNMQISITTYDSLLYSLRKA---DVALAIFKEMESCGIPP 212

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESM 176
              ++G+LID  C QG + +AL+   E   +G  +P  + +  L+  LCN   + +A+S+
Sbjct: 213 SDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFIQDAKSV 272

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F  M + G+ P+ +TY+ ++ G CKV  VN A + +  +    ++ ++VT   L++G   
Sbjct: 273 FCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRL 332

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G  R        M   GV P++  Y  LI GHC+ G++ E M +  ++    I  ++ T
Sbjct: 333 HGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVT 392

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM- 355
           Y++LI  L   G     E L  ++   G+  +V+ Y+ LI G+CK G++ +AL V + M 
Sbjct: 393 YSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMC 452

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLSKDGN 414
             + V P  V   S++ G CK G +D A   Y E V     P DVV++  +IDG +K G+
Sbjct: 453 CSQRVIPTSVNHVSILLGLCKKGFLDEARS-YLETVASKYQPSDVVLYNVVIDGYAKVGD 511

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +   ++LY  ++ A + P++ T +SL++G  K G +  A ++F+     +D     P  V
Sbjct: 512 IGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFM-AIQLSD---LLPTTV 567

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  ++ AL   G++     +F +M    +RP+  TY+ +++GL +     D   +L DM
Sbjct: 568 TYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDM 627

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
            + G   D +    +++G+ E  D K+AF   E +
Sbjct: 628 YREGFDADPIPYNTLIQGFCETQDAKNAFYVYELM 662



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 245/515 (47%), Gaps = 10/515 (1%)

Query: 50  FNPS--VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
            NPS   +ST+I    ++G + EA  +++ +    +   I  CN+L+NG    G    + 
Sbjct: 281 LNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIP 340

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  E M   G+  DVVTY +LI   C  GDV + + +  +++ +GIE  +V Y++LI+ L
Sbjct: 341 KMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINAL 400

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-HHNLQPN 223
             +    E E++F  +   G+  ++  Y+ L+ G+CK+ ++ RAL+ ++ M     + P 
Sbjct: 401 FKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPT 460

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V    ++ GLCK G L  A ++   +A      ++ +YN +IDG+ K G++  A+ L  
Sbjct: 461 SVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYD 520

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            +    + P + T N L+ G C  G L  AE     +    +L   VTY +L+D   + G
Sbjct: 521 AIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAG 580

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +   LS+  +MT KG+ PN +T+S +I G CK      A  +  +M  +    D + + 
Sbjct: 581 KVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYN 640

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI G  +  + K    +Y+ M+   + PS  T + L++ L   G + +A    LE   K
Sbjct: 641 TLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHA-EMKLESFRK 699

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                       Y  +I+A C  G   KA      +           ++  +  L + + 
Sbjct: 700 QGA---ELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQF 756

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             + +ML++ M+ +G+ PD  + +V+    Q+  +
Sbjct: 757 TREALMLISIMLSVGVYPDIQLYRVLGTAVQKKNE 791



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 6/210 (2%)

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           + + + + +L +   +A     A+ + ++M   ++   +  + +L+  L K       L 
Sbjct: 144 DSSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRK---ADVALA 200

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           ++KEM    I PS ++   LI GL K G+I  AL+F L++T K   G   P  + +  ++
Sbjct: 201 IFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSF-LQETRKE--GKFKPLGMTFNTLM 257

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
            ALC  G I  A  +F  M    L P   TY+T++ GL +   + +   +   + + G+ 
Sbjct: 258 SALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGME 317

Query: 541 PDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
            D V    ++ G++ +G  +   +  E ++
Sbjct: 318 LDIVTCNSLINGFRLHGHTREIPKMIEMMR 347


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 245/467 (52%), Gaps = 7/467 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N+L++G    G ++     +++M  CG++  V      I      G   +A  +FD M+ 
Sbjct: 243 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 302

Query: 148 KGIEPTVVIYTILIHG--LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           KG +P ++ Y+ ++HG     ++ + +  ++F  M   G+ PN + +N L++ Y +   +
Sbjct: 303 KGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 362

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           ++A+  + +M +  + P+ VTF  ++  LC++G L  A + F HM   GV P+  VY CL
Sbjct: 363 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 422

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-NILIKGLCGVGQLEGAEGLLQKMYKEG 324
           I G C  G L +A  L SEM   +I P    Y + +I  LC  G++   + ++  M + G
Sbjct: 423 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTG 482

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVT+NSL++GYC  G+ME+A ++   M   G+EPN   + +L+DG CK G ID A+
Sbjct: 483 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 542

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +M+ K + P  V+++ ++ GL +        +++ EM+E+  T S+ T   ++ GL
Sbjct: 543 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 602

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +N     A N  LEK    +  +   + + +  +I A+   G+  +A +LF  + +  L
Sbjct: 603 CRNNCTDEA-NMLLEKLFAMNVKF---DIITFNIVISAMFKVGRRQEAKELFDAISTYGL 658

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            P+  TY+ M+  L++ +   +   L   + K G   D+ +   +VR
Sbjct: 659 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 705



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 243/520 (46%), Gaps = 11/520 (2%)

Query: 50  FNPSVFS-TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
             P  FS +LI  F + G +++A  ++ ++    VLP I  CN+++  L K  + D    
Sbjct: 131 LGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 190

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++MV  G+  D+ TY ++ID  C    + KA  + ++M++ G  P  + Y  LIHG  
Sbjct: 191 IVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYS 250

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 E+  +F+ M  CGV+P +   N+ +    K    N A   +  M+    +P+++
Sbjct: 251 ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 310

Query: 226 TFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++  ++ G     +  L    N F  M   G+ PN  V+N LI+ + + G + +AM +  
Sbjct: 311 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 370

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+   + PD  T+  +I  LC +G+L+ A      M   G+  +   Y  LI G C  G
Sbjct: 371 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 430

Query: 344 DMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           ++ KA  + S+M  K +  P V  FSS+I+  CK G +     +   MV     P+VV F
Sbjct: 431 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 490

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +L++G    GNM+E   L   M    I P+ +   +L+ G  KNGRI +AL  F +   
Sbjct: 491 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 550

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K       P  VLY+ I+  L    +   A K+F +M          TY  +L GL R  
Sbjct: 551 KG----VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 606

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +  MLL  +  M +  D +   +++    + G  + A
Sbjct: 607 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 646



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 14/477 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++   +  + D        ++  GL  D  +Y  LI      G+V KA  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+++G+ P ++I   +I  LC   +M +AES+ + M + G+ P+L+TY+ ++DG CK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++A     +M+    +PN +T+  L+ G    G    +   F  M+  GV P +  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ--LEGAEGLLQK 319
            N  I    K G   EA  +   M      PD+ +Y+ ++ G        L     +   
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +GI  N   +N LI+ Y + G M+KA+ +   M  KG+ P+ VTF+++I   C+ G 
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVS 438
           +D A+  +  MV   + P   V+  LI G    G + +   L  EM+   I  P V   S
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 439 SLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           S+I+ L K GR++     ++  ++   +       PN V + ++++  C  G + +A  L
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQR-------PNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              M S  + P+   Y T++ G  +  R+ D + +  DM+  G+ P +V+  +++ G
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 211/445 (47%), Gaps = 6/445 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +LIDC          L +   ++  G+ P    Y+ LI+G   + ++ +A  +F  M
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 160

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E GV+P +   N+++   CK+ ++++A     +M+   + P++ T+ +++DGLCK   +
Sbjct: 161 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 220

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M + G  PN   YN LI G+  +G   E++ +  +M    + P V   N  
Sbjct: 221 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 280

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD--MEKALSVCSQMTEK 358
           I  L   G+   A+ +   M  +G   ++++Y++++ GY    D  +    ++ + M  K
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN   F+ LI+   + G +D AM ++ +M  K ++PD V F  +I  L + G + + 
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L  +  M++  + PS      LI G   +G +  A     E  +K       P    +++
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD---IPPPGVKYFSS 457

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           II  LC +G++ +   +   M     RP+  T+ +++ G      M +   LL  M  +G
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           I P+  I   +V GY +NG +  A 
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDAL 542



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 238/518 (45%), Gaps = 50/518 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI  +S  G   E++ V++++    V+P +  CN+ ++ L K G+ +     +
Sbjct: 238 NSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIF 297

Query: 108 EEMVLCGLVADVVTYGVLI-------DCC------------------------------- 129
           + MVL G   D+++Y  ++       D C                               
Sbjct: 298 DSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYA 357

Query: 130 -CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            CG  D  KA+ +F++M +KG+ P  V +  +I  LC   ++ +A   F  M + GV P+
Sbjct: 358 RCGMMD--KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 415

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGNFF 247
              Y  L+ G C   ++ +A E   EM++ ++ P  V  F  +++ LCK G +    +  
Sbjct: 416 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 475

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G  PN+  +N L++G+C  GN+ EA +L   M    I P+ + Y  L+ G C  
Sbjct: 476 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 535

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A  + + M  +G+    V Y+ ++ G  +      A  +  +M E G   ++ T+
Sbjct: 536 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTY 595

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             ++ G C+    D A  L  ++   ++  D++ F  +I  + K G  +E   L+  +  
Sbjct: 596 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIST 655

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P++ T S +I  L K      A N F+   +K+  G+ S + +L   I++ L    
Sbjct: 656 YGLVPNIQTYSMMITNLIKEESYEEADNLFI-SVEKS--GHASDSRLL-NHIVRMLLNKA 711

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           ++ KAS   S +  +NL  +  T  ++L  L   + M+
Sbjct: 712 EVAKASNYLSIIGENNLTLEAST-ISLLASLFSREGMI 748



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 14/423 (3%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           +++FN + +  I   N  VF+ LI A++  G +++A+ ++  ++   ++P       +++
Sbjct: 331 HNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L + G+ D     +  MV  G+      YG LI  CC  G+++KA  L  EM++K I P
Sbjct: 390 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 153 TVVIY-TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
             V Y + +I+ LC E ++ E + +   M + G  PN+ T+N+LM+GYC V ++  A   
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M    ++PN   +G L+DG CK G +  A   F  M   GV P   +Y+ ++ G  +
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 569

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A     A  +  EM +   +  + TY +++ GLC     + A  LL+K++   +  +++T
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N +I    K G  ++A  +   ++  G+ PN+ T+S +I    K  + + A  L+  + 
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689

Query: 392 IKSLVPDVVVFTALIDGL------SKDGNMKETLRLYKEMLEA---KITPSVFTVSSLIH 442
                 D  +   ++  L      +K  N    +      LEA    +  S+F+   +I 
Sbjct: 690 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749

Query: 443 GLF 445
           GLF
Sbjct: 750 GLF 752



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 34/339 (10%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN LID + +       +++   + K  + PD F+Y+ LI G    G+++ A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M ++G+L  ++  NS+I   CK  +M+KA S+  +M + G+ P++ T+S +IDG CK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +  +D A  +  +MV     P+ + + +LI G S  G   E++R++K+M    + P+V  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 437 VSSLIHGLFKNGRISNALNFF---LEKTDKTD--------GGYCS--------------- 470
            +S IH LFK+GR + A   F   + K  K D         GY +               
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 471 -------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN  ++  +I A    G + KA  +F DM++  + PD  T+ T++  L R  R
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + D +     M+ +G+ P   +   +++G   +G+L  A
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 435



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 12/270 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F++L+  +  +G++EEA   L     I + P       L++G  K G+ D     +
Sbjct: 486 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 545

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M+  G+    V Y +++           A  +F EMI+ G   ++  Y +++ GLC  
Sbjct: 546 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 605

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N   EA  +   +    V  ++ T+N ++    KV     A E +  +  + L PN+ T+
Sbjct: 606 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 665

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID------GHCKAGNLFEAM-- 279
            +++  L K      A N F+ + K G   +  + N ++          KA N    +  
Sbjct: 666 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 725

Query: 280 -SLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            +L  E     +   +F+   +IKGL G  
Sbjct: 726 NNLTLEASTISLLASLFSREGMIKGLFGTA 755


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 241/500 (48%), Gaps = 19/500 (3%)

Query: 80  VLPAIQ--ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV-TYGVLIDCCCGQGDVM 136
           V+P +Q    +A   GL +  +F      Y  MV    V     T+GV     C  G   
Sbjct: 121 VVPLLQRRPVSASQGGLPRARRF----ALYRRMVHRDRVPPTTFTFGVAARALCRLGRAD 176

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +AL L   M   G  P  V+Y  +IH LC++  + EA ++   M   G   ++ T++ ++
Sbjct: 177 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 236

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C +  V  A      M+     P V+T+G L+ GLC+V +   A       A  G  
Sbjct: 237 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA------RAMLGRV 290

Query: 257 P--NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           P  N+ ++N +I G    G L EA  L   M      PD  TY+IL+ GLC +G++  A 
Sbjct: 291 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            LL++M K+G   NVVTY  ++  +CK G  +   ++  +M+ KG+  N   ++ +I   
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AMGL  EM  +   PD+  +  +I  L  +  M+E   +++ +LE  +  + 
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T +++IH L ++GR  +A+    E         CS + V Y  +I+A+C DG + ++  
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHG----CSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           L  +M    ++P+N +Y  ++  L + +R+ D + L   M+  G+ PD V    ++ G  
Sbjct: 527 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 586

Query: 555 ENGDLKSAFRCSEFLKESRI 574
           + G + +A    E L    +
Sbjct: 587 KMGWMHAALNLLEKLHNENV 606



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 237/504 (47%), Gaps = 25/504 (4%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F     A   +G  +EAL + R +     +P       +++ L  +G          EM
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +L G  ADV T+  ++   CG G V +A  L D M+ KG  P V+ Y  L+ GLC   + 
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280

Query: 171 VEAESMFRSMRECGVVP--NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            EA +M       G VP  N+  +N ++ G      +  A E Y  M     QP+  T+ 
Sbjct: 281 DEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 334

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +LM GLCK+G + +A      M K G  PN+  Y  ++   CK G   +  +L  EM   
Sbjct: 335 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 394

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            ++ +   YN +I  LC  G+++ A GL+Q+M  +G   ++ +YN++I   C    ME+A
Sbjct: 395 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 454

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             +   + E+GV  N +T++++I    + G    A+ L  EM++     DVV +  LI  
Sbjct: 455 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 514

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           + KDGN+  +L L +EM E  I P+  + + LI  L K  R+ +AL    +  ++     
Sbjct: 515 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG---- 570

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
            +P+ V Y  +I  LC  G +  A  L   + ++N+ PD  TY  ++    + + + D  
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 630

Query: 529 MLL----------ADMIKMGIVPD 542
           MLL           D   M I+PD
Sbjct: 631 MLLNRAMAAVCPVGDRRIMQILPD 654



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 4/366 (1%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDS 102
            +P+ N  +F+T+I      G + EA  +Y  + +    P     + L++GL K G+  S
Sbjct: 289 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGS 348

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
                 EM   G   +VVTY +++   C  G       L +EM  KG+      Y  +I+
Sbjct: 349 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 408

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC + +M EA  + + MR  G  P++ +YN ++   C    +  A   +  +L   +  
Sbjct: 409 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 468

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N +T+  ++  L + G  + A      M   G   ++  YN LI   CK GN+  ++ L 
Sbjct: 469 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 528

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM +  I P+  +YNILI  LC   ++  A  L ++M  +G+  ++VTYN+LI+G CK 
Sbjct: 529 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 588

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI-DAAMGLYTEMVIKSLVPDVVV 401
           G M  AL++  ++  + V P+++T++ LI   CK   + DAAM L   M     V D  +
Sbjct: 589 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRI 648

Query: 402 FTALID 407
              L D
Sbjct: 649 MQILPD 654


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 245/467 (52%), Gaps = 7/467 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N+L++G    G ++     +++M  CG++  V      I      G   +A  +FD M+ 
Sbjct: 319 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 378

Query: 148 KGIEPTVVIYTILIHG--LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           KG +P ++ Y+ ++HG     ++ + +  ++F  M   G+ PN + +N L++ Y +   +
Sbjct: 379 KGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 438

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           ++A+  + +M +  + P+ VTF  ++  LC++G L  A + F HM   GV P+  VY CL
Sbjct: 439 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 498

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-NILIKGLCGVGQLEGAEGLLQKMYKEG 324
           I G C  G L +A  L SEM   +I P    Y + +I  LC  G++   + ++  M + G
Sbjct: 499 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTG 558

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVT+NSL++GYC  G+ME+A ++   M   G+EPN   + +L+DG CK G ID A+
Sbjct: 559 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 618

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +M+ K + P  V+++ ++ GL +        +++ EM+E+  T S+ T   ++ GL
Sbjct: 619 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 678

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +N     A N  LEK    +  +   + + +  +I A+   G+  +A +LF  + +  L
Sbjct: 679 CRNNCTDEA-NMLLEKLFAMNVKF---DIITFNIVISAMFKVGRRQEAKELFDAISTYGL 734

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            P+  TY+ M+  L++ +   +   L   + K G   D+ +   +VR
Sbjct: 735 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 781



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 243/520 (46%), Gaps = 11/520 (2%)

Query: 50  FNPSVFS-TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
             P  FS +LI  F + G +++A  ++ ++    VLP I  CN+++  L K  + D    
Sbjct: 207 LGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 266

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++MV  G+  D+ TY ++ID  C    + KA  + ++M++ G  P  + Y  LIHG  
Sbjct: 267 IVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYS 326

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 E+  +F+ M  CGV+P +   N+ +    K    N A   +  M+    +P+++
Sbjct: 327 ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 386

Query: 226 TFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++  ++ G     +  L    N F  M   G+ PN  V+N LI+ + + G + +AM +  
Sbjct: 387 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 446

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+   + PD  T+  +I  LC +G+L+ A      M   G+  +   Y  LI G C  G
Sbjct: 447 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 506

Query: 344 DMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           ++ KA  + S+M  K +  P V  FSS+I+  CK G +     +   MV     P+VV F
Sbjct: 507 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 566

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +L++G    GNM+E   L   M    I P+ +   +L+ G  KNGRI +AL  F +   
Sbjct: 567 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 626

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K       P  VLY+ I+  L    +   A K+F +M          TY  +L GL R  
Sbjct: 627 KG----VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 682

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +  MLL  +  M +  D +   +++    + G  + A
Sbjct: 683 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 722



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 14/477 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++   +  + D        ++  GL  D  +Y  LI      G+V KA  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+++G+ P ++I   +I  LC   +M +AES+ + M + G+ P+L+TY+ ++DG CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++A     +M+    +PN +T+  L+ G    G    +   F  M+  GV P +  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ--LEGAEGLLQK 319
            N  I    K G   EA  +   M      PD+ +Y+ ++ G        L     +   
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +GI  N   +N LI+ Y + G M+KA+ +   M  KG+ P+ VTF+++I   C+ G 
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVS 438
           +D A+  +  MV   + P   V+  LI G    G + +   L  EM+   I  P V   S
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 439 SLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           S+I+ L K GR++     ++  ++   +       PN V + ++++  C  G + +A  L
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQR-------PNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              M S  + P+   Y T++ G  +  R+ D + +  DM+  G+ P +V+  +++ G
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 211/445 (47%), Gaps = 6/445 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +LIDC          L +   ++  G+ P    Y+ LI+G   + ++ +A  +F  M
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 236

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E GV+P +   N+++   CK+ ++++A     +M+   + P++ T+ +++DGLCK   +
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 296

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M + G  PN   YN LI G+  +G   E++ +  +M    + P V   N  
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD--MEKALSVCSQMTEK 358
           I  L   G+   A+ +   M  +G   ++++Y++++ GY    D  +    ++ + M  K
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN   F+ LI+   + G +D AM ++ +M  K ++PD V F  +I  L + G + + 
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L  +  M++  + PS      LI G   +G +  A     E  +K       P    +++
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD---IPPPGVKYFSS 533

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           II  LC +G++ +   +   M     RP+  T+ +++ G      M +   LL  M  +G
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           I P+  I   +V GY +NG +  A 
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDAL 618



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 239/524 (45%), Gaps = 49/524 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI  +S  G   E++ V++++    V+P +  CN+ ++ L K G+ +     +
Sbjct: 314 NSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIF 373

Query: 108 EEMVLCGLVADVVTYGVLI-------DCC------------------------------- 129
           + MVL G   D+++Y  ++       D C                               
Sbjct: 374 DSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYA 433

Query: 130 -CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            CG  D  KA+ +F++M +KG+ P  V +  +I  LC   ++ +A   F  M + GV P+
Sbjct: 434 RCGMMD--KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 491

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGNFF 247
              Y  L+ G C   ++ +A E   EM++ ++ P  V  F  +++ LCK G +    +  
Sbjct: 492 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 551

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G  PN+  +N L++G+C  GN+ EA +L   M    I P+ + Y  L+ G C  
Sbjct: 552 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 611

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A  + + M  +G+    V Y+ ++ G  +      A  +  +M E G   ++ T+
Sbjct: 612 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTY 671

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             ++ G C+    D A  L  ++   ++  D++ F  +I  + K G  +E   L+  +  
Sbjct: 672 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIST 731

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P++ T S +I  L K      A N F+   +K+  G+ S + +L   I++ L    
Sbjct: 732 YGLVPNIQTYSMMITNLIKEESYEEADNLFI-SVEKS--GHASDSRLL-NHIVRMLLNKA 787

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           ++ KAS   S +  +NL  +  T + +     R  +  + + LL
Sbjct: 788 EVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 34/339 (10%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN LID + +       +++   + K  + PD F+Y+ LI G    G+++ A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M ++G+L  ++  NS+I   CK  +M+KA S+  +M + G+ P++ T+S +IDG CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +  +D A  +  +MV     P+ + + +LI G S  G   E++R++K+M    + P+V  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 437 VSSLIHGLFKNGRISNALNFF---LEKTDKTD--------GGYCS--------------- 470
            +S IH LFK+GR + A   F   + K  K D         GY +               
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 471 -------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN  ++  +I A    G + KA  +F DM++  + PD  T+ T++  L R  R
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + D +     M+ +G+ P   +   +++G   +G+L  A
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 511



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 87/169 (51%), Gaps = 4/169 (2%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
           +++ +A+ S+ I   N  ++ TL+  + + G I++AL V+R +    V P     + +L+
Sbjct: 583 FALLDAMASIGIEP-NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 641

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL +  +  +  + + EM+  G    + TYGV++   C      +A  L +++    ++ 
Sbjct: 642 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 701

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++ + I+I  +    +  EA+ +F ++   G+VPN+ TY+ ++    K
Sbjct: 702 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 750


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 231/436 (52%), Gaps = 20/436 (4%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE-AESMFRSM-RECGVVPNLY 190
           GD  +AL L   M D GI P VV +T LI G C +N+MVE A  +F+ M +     P+ +
Sbjct: 28  GDAARALEL---MCDAGIHPDVVTFTALIRGFC-KNRMVERAWEIFQEMIKSNRCQPDCF 83

Query: 191 TYNALMDGYCKVADVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            Y  L+DGYCK   ++RALE   EM +   +QP+VV +  ++DGLC+      A  F   
Sbjct: 84  LYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDE 143

Query: 250 -MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M + G  P +  Y  LI G CKA  +  AM++ + M + +I P + +Y+++I GL   G
Sbjct: 144 TMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAG 203

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           ++  A  ++++M   G   NVV Y +LIDG CK G ++ A ++   M   G  PN  T++
Sbjct: 204 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 263

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +LID  C+    + A+GL+    I+   P DV ++TA++ GL ++  + +   L++EM  
Sbjct: 264 TLIDTFCRNDRTETALGLFDH--IRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRL 321

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
           A ++      + L+HG F++GR   A     E  D  D G C  N + Y  +I   C + 
Sbjct: 322 AGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGD--DPG-CVANLLTYNTVIAGCCLES 378

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA-VIN 546
            ++    LF +MR   + PD  TY+ ++  LL +  +     L  +M+  G+ P + V+ 
Sbjct: 379 GMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLG 434

Query: 547 QVMVR-GYQENGDLKS 561
           +V+ R  +   GDL +
Sbjct: 435 RVVARLCWSRRGDLAA 450



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 212/447 (47%), Gaps = 53/447 (11%)

Query: 48  PKFNPSVFSTLIIAFSE---MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   F++LI A S+   +G    AL +     + P +    AL+ G  K    +  W
Sbjct: 7   PPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAW 66

Query: 105 EFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIH 162
           E ++EM+       D   YGVLID  C +  + +AL L  EM +++ I+P VVIY  ++ 
Sbjct: 67  EIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 126

Query: 163 GLCNENKMVEA-----ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           GLC  N+ +EA     E+M R     G  P + TY +L+ G CK   +  A+  ++ ML 
Sbjct: 127 GLCRSNRFLEAWKFLDETMVRQ----GCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLE 182

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
             +QP +V++ V++DGL K G +  A      M   G   N+ +Y  LIDG CK+G L +
Sbjct: 183 RKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDD 242

Query: 278 AMSLCSEMEKFEISP----------------------------------DVFTYNILIKG 303
           A +L   M++    P                                  DV  Y  ++ G
Sbjct: 243 AYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSG 302

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEP 362
           LC   +L+ A  L ++M   G+ A+   YN L+ G  + G  E+A  +  ++  + G   
Sbjct: 303 LCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVA 362

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N++T++++I G C    +++ M L+ EM  + + PD   ++ALID L   G ++    L 
Sbjct: 363 NLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLC 418

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGR 449
           +EML + ++P    +  ++  L  + R
Sbjct: 419 EEMLASGLSPPSGVLGRVVARLCWSRR 445



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 198/422 (46%), Gaps = 47/422 (11%)

Query: 187 PNLYTYNALMDGYCK---VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           PN + + +L+D   K   + D  RALE    M    + P+VVTF  L+ G CK   +  A
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALEL---MCDAGIHPDVVTFTALIRGFCKNRMVERA 65

Query: 244 GNFFVHMAKFG-VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILI 301
              F  M K     P+ F+Y  LIDG+CK   +  A+ L  EM  +  I PDV  YN ++
Sbjct: 66  WEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIV 125

Query: 302 KGLCGVGQ-LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
            GLC   + LE  + L + M ++G    VVTY SLI G CK   M+ A+++ + M E+ +
Sbjct: 126 DGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKI 185

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
           +P +V++S +IDG  KAG +  A  +  EM       +VV++T LIDGL K G + +   
Sbjct: 186 QPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYA 245

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           LY+ M  +   P+  T ++LI    +N R   AL  F    D     YC  +  +Y A++
Sbjct: 246 LYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRD-----YCPLDVAMYTAVV 300

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV------------- 527
             LC + ++  A  LF +MR   +  D   Y  +L G  R+ R  +              
Sbjct: 301 SGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGC 360

Query: 528 -------------------MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR-CSE 567
                              M+L  +M + GI PD      ++     +G+++ AF  C E
Sbjct: 361 VANLLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEE 420

Query: 568 FL 569
            L
Sbjct: 421 ML 422



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 185/417 (44%), Gaps = 57/417 (13%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEFYEE 109
           ++  LI  + +   ++ AL + R++ V   IQ      N++++GL +  +F   W+F +E
Sbjct: 84  LYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDE 143

Query: 110 -MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            MV  G    VVTY  LI   C    +  A+ +++ M+++ I+PT+V Y+++I GL    
Sbjct: 144 TMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAG 203

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ +A  + R M   G   N+  Y  L+DG CK   ++ A   Y  M      PN  T+ 
Sbjct: 204 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 263

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+D  C+      A   F H+  +    ++ +Y  ++ G C+   L +A +L  EM   
Sbjct: 264 TLIDTFCRNDRTETALGLFDHIRDYCPL-DVAMYTAVVSGLCRERRLDDARALFREMRLA 322

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKE----- 342
            +S D   YN+L+ G    G+ E A  +L+++  + G +AN++TYN++I G C E     
Sbjct: 323 GVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGMVL 382

Query: 343 --------------------------GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
                                     G++ +A  +C +M   G+ P       ++   C 
Sbjct: 383 FYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCW 442

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALID----------------GLSKDGNMKE 417
           +   D A  L  EM +   V D   F+   D                G  KDG M+E
Sbjct: 443 SRRGDLAAKL-IEMAMA--VDDTASFSLPWDDEDGAAQDEDSQREELGSIKDGAMQE 496



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 9/197 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC--NALLNGLIKKGKFDSVWEFYE 108
           N   ++TLI  F      E AL ++  I     +      A+++GL ++ + D     + 
Sbjct: 258 NQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFR 317

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNE 167
           EM L G+ AD   Y VL+      G   +A  + +E+  D G    ++ Y  +I G C E
Sbjct: 318 EMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLE 377

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           + MV    +F  MR+ G+ P+  TY+AL+D      ++ RA +   EML   L P     
Sbjct: 378 SGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVL 433

Query: 228 GVLMDGLC--KVGELRA 242
           G ++  LC  + G+L A
Sbjct: 434 GRVVARLCWSRRGDLAA 450


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 219/441 (49%), Gaps = 8/441 (1%)

Query: 69  EEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           E+AL+   ++    ++P     N LL  LIK   F+  W  + E     +  DV ++G++
Sbjct: 99  EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIM 157

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           I  CC  G + K   +  +M + G+ P VV+YT LI G C    +   + +F  M E  V
Sbjct: 158 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 217

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
           V N YTY  L++G+ K+      +E Y +M    + PNV T+  ++   C  G+L  A  
Sbjct: 218 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 277

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
            F  M + GV  N+  YN LI G C+   + EA  L   M++  +SP++ +YN LI G C
Sbjct: 278 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 337

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            +G L+ A  L  +M   G   ++ TYN LI G+ +  +      +  +M  +G+ P+ V
Sbjct: 338 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ L+D   ++ NI+ A  +Y+ M    LV D+ ++  LI GL   G+MKE  +L+K +
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
            E  + P+    +++I+G  K G    AL    E  +        PN   Y + I  LC 
Sbjct: 458 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG----MVPNVASYNSTIXILCK 513

Query: 486 DGQILKASKLFSDMRSDNLRP 506
           D +  +A  L  DM    L+P
Sbjct: 514 DEKWTEAEVLLKDMIELGLKP 534



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 196/372 (52%), Gaps = 5/372 (1%)

Query: 39  FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNG 93
           F  L  +E    +P+V  ++TLI    + G IE    ++ K   ++V+        L+NG
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
             K G      E YE+M L G+V +V TY  +I  CC  G +  A  LFDEM ++G+   
Sbjct: 231 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 290

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV Y  LI GLC E +++EAE +   M+  G+ PNL +YN L+DGYC + ++++A   ++
Sbjct: 291 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFN 350

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           +M      P++ T+ +L+ G  +        +    M   G+ P+   Y  L+D   ++ 
Sbjct: 351 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 410

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           N+ +A  + S MEK  +  D++ Y +LI GLC VG ++ A  L + + +  +  N V YN
Sbjct: 411 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 470

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           ++I GYCKEG   +AL +  +M E G+ PNV +++S I   CK      A  L  +M+  
Sbjct: 471 TMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIEL 530

Query: 394 SLVPDVVVFTAL 405
            L P + ++  +
Sbjct: 531 GLKPSISIWNMI 542



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 215/430 (50%), Gaps = 4/430 (0%)

Query: 26  LKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE--VLPA 83
           ++S+ P    +     +    +P  N   F+ L+I   +    E+A  V+ + +  V   
Sbjct: 93  VRSQLPEQALFYXNQMIGRGLVPGSN--TFNNLLILLIKSNFFEKAWRVFNETKGNVKLD 150

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + +   ++ G  + G  D  +E   +M   GL  +VV Y  LID CC  GD+ +   LF 
Sbjct: 151 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 210

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           +M +  +      YT+LI+G        +   ++  M+  G+VPN+YTYN+++   C   
Sbjct: 211 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 270

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            +N A E + EM    +  NVVT+  L+ GLC+   +  A      M + G+ PN+  YN
Sbjct: 271 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            LIDG+C  GNL +A SL ++M+    SP + TYNILI G        G   ++++M   
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 390

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  + VTY  L+D   +  ++EKA  + S M + G+  ++  +  LI G C  G++  A
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             L+  +    L P+ V++  +I G  K+G+    LRL KEM E  + P+V + +S I  
Sbjct: 451 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXI 510

Query: 444 LFKNGRISNA 453
           L K+ + + A
Sbjct: 511 LCKDEKWTEA 520



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 196/402 (48%), Gaps = 3/402 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K +   F  +I    E+G++++   V  ++E +   P +     L++G  K G  +   +
Sbjct: 148 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 207

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M    +VA+  TY VLI+     G     + L+++M   GI P V  Y  +I   C
Sbjct: 208 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
           N+ K+  A  +F  MRE GV  N+ TYN L+ G C+   V  A      M    L PN++
Sbjct: 268 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 327

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++  L+DG C +G L  A + F  M   G  P++  YN LI G  +A N      +  EM
Sbjct: 328 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 387

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           E   +SP   TY IL+  L     +E A  +   M K G++A++  Y  LI G C  GDM
Sbjct: 388 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 447

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A  +   + E  ++PN V ++++I G CK G+   A+ L  EM    +VP+V  + + 
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNST 507

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           I  L KD    E   L K+M+E  + PS+   + +    F N
Sbjct: 508 IXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 211/458 (46%), Gaps = 27/458 (5%)

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV--------- 186
           +KAL+LF     +G + T    + ++H L + N    ++S+   +    +          
Sbjct: 7   LKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSL 66

Query: 187 ------PNLYTY-------NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
                 P+L ++        A+++ + +     +AL + ++M+   L P   TF  L+  
Sbjct: 67  FHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLIL 126

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           L K      A   F +  K  V  +++ +  +I G C+ G L +   +  +ME+  +SP+
Sbjct: 127 LIKSNFFEKAWRVF-NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPN 185

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           V  Y  LI G C  G +E  + L  KM +  ++AN  TY  LI+G+ K G  +  + +  
Sbjct: 186 VVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYE 245

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M   G+ PNV T++S+I   C  G ++ A  L+ EM  + +  +VV +  LI GL ++ 
Sbjct: 246 KMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 305

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            + E  RL   M    ++P++ + ++LI G    G +  A + F +   K+ G   SP+ 
Sbjct: 306 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM--KSSGQ--SPSL 361

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
             Y  +I            + +  +M +  L P   TYT ++  L+R+  +     + + 
Sbjct: 362 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 421

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M K G+V D  I  V++ G    GD+K A +  + L E
Sbjct: 422 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 5/254 (1%)

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M   G++    T+N+L+    K    EKA  V ++ T+  V+ +V +F  +I G C+ G
Sbjct: 107 QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVG 165

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D    +  +M    L P+VVV+T LIDG  K+G+++   +L+ +M E  +  + +T +
Sbjct: 166 YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 225

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI+G FK G   + +  + EK   T      PN   Y ++I   C DG++  A +LF +
Sbjct: 226 VLINGFFKMGLKKDGIELY-EKMKLTG---IVPNVYTYNSMICRCCNDGKLNNAFELFDE 281

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           MR   +  +  TY T++ GL + +R+L+   L+  M + G+ P+ +    ++ GY   G+
Sbjct: 282 MRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN 341

Query: 559 LKSAFRCSEFLKES 572
           L  A      +K S
Sbjct: 342 LDKASSLFNQMKSS 355


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 245/467 (52%), Gaps = 7/467 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N+L++G    G ++     +++M  CG++  V      I      G   +A  +FD M+ 
Sbjct: 299 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 358

Query: 148 KGIEPTVVIYTILIHG--LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           KG +P ++ Y+ ++HG     ++ + +  ++F  M   G+ PN + +N L++ Y +   +
Sbjct: 359 KGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 418

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           ++A+  + +M +  + P+ VTF  ++  LC++G L  A + F HM   GV P+  VY CL
Sbjct: 419 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 478

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-NILIKGLCGVGQLEGAEGLLQKMYKEG 324
           I G C  G L +A  L SEM   +I P    Y + +I  LC  G++   + ++  M + G
Sbjct: 479 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTG 538

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVT+NSL++GYC  G+ME+A ++   M   G+EPN   + +L+DG CK G ID A+
Sbjct: 539 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 598

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +M+ K + P  V+++ ++ GL +        +++ EM+E+  T S+ T   ++ GL
Sbjct: 599 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 658

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +N     A N  LEK    +  +   + + +  +I A+   G+  +A +LF  + +  L
Sbjct: 659 CRNNCTDEA-NMLLEKLFAMNVKF---DIITFNIVISAMFKVGRRQEAKELFDAISTYGL 714

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            P+  TY+ M+  L++ +   +   L   + K G   D+ +   +VR
Sbjct: 715 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 761



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 243/520 (46%), Gaps = 11/520 (2%)

Query: 50  FNPSVFS-TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
             P  FS +LI  F + G +++A  ++ ++    VLP I  CN+++  L K  + D    
Sbjct: 187 LGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 246

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++MV  G+  D+ TY ++ID  C    + KA  + ++M++ G  P  + Y  LIHG  
Sbjct: 247 IVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYS 306

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 E+  +F+ M  CGV+P +   N+ +    K    N A   +  M+    +P+++
Sbjct: 307 ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 366

Query: 226 TFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++  ++ G     +  L    N F  M   G+ PN  V+N LI+ + + G + +AM +  
Sbjct: 367 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 426

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+   + PD  T+  +I  LC +G+L+ A      M   G+  +   Y  LI G C  G
Sbjct: 427 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 486

Query: 344 DMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           ++ KA  + S+M  K +  P V  FSS+I+  CK G +     +   MV     P+VV F
Sbjct: 487 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 546

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +L++G    GNM+E   L   M    I P+ +   +L+ G  KNGRI +AL  F +   
Sbjct: 547 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 606

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K       P  VLY+ I+  L    +   A K+F +M          TY  +L GL R  
Sbjct: 607 KG----VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 662

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +  MLL  +  M +  D +   +++    + G  + A
Sbjct: 663 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 702



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 14/477 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++   +  + D        ++  GL  D  +Y  LI      G+V KA  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+++G+ P ++I   +I  LC   +M +AES+ + M + G+ P+L+TY+ ++DG CK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++A     +M+    +PN +T+  L+ G    G    +   F  M+  GV P +  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ--LEGAEGLLQK 319
            N  I    K G   EA  +   M      PD+ +Y+ ++ G        L     +   
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +GI  N   +N LI+ Y + G M+KA+ +   M  KG+ P+ VTF+++I   C+ G 
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS-VFTVS 438
           +D A+  +  MV   + P   V+  LI G    G + +   L  EM+   I P  V   S
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 439 SLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           S+I+ L K GR++     ++  ++   +       PN V + ++++  C  G + +A  L
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQR-------PNVVTFNSLMEGYCLVGNMEEAFAL 565

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              M S  + P+   Y T++ G  +  R+ D + +  DM+  G+ P +V+  +++ G
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 211/445 (47%), Gaps = 6/445 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +LIDC          L +   ++  G+ P    Y+ LI+G   + ++ +A  +F  M
Sbjct: 158 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 216

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E GV+P +   N+++   CK+ ++++A     +M+   + P++ T+ +++DGLCK   +
Sbjct: 217 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 276

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M + G  PN   YN LI G+  +G   E++ +  +M    + P V   N  
Sbjct: 277 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 336

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD--MEKALSVCSQMTEK 358
           I  L   G+   A+ +   M  +G   ++++Y++++ GY    D  +    ++ + M  K
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN   F+ LI+   + G +D AM ++ +M  K ++PD V F  +I  L + G + + 
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L  +  M++  + PS      LI G   +G +  A     E  +K       P    +++
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD---IPPPGVKYFSS 513

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           II  LC +G++ +   +   M     RP+  T+ +++ G      M +   LL  M  +G
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           I P+  I   +V GY +NG +  A 
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDAL 598



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 230/499 (46%), Gaps = 49/499 (9%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   +++LI  +S  G   E++ V++++    V+P +  CN+ ++ L K G+ +    
Sbjct: 292 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 351

Query: 106 FYEEMVLCGLVADVVTYGVLI-------DCC----------------------------- 129
            ++ MVL G   D+++Y  ++       D C                             
Sbjct: 352 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411

Query: 130 ---CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
              CG  D  KA+ +F++M +KG+ P  V +  +I  LC   ++ +A   F  M + GV 
Sbjct: 412 YARCGMMD--KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 469

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGN 245
           P+   Y  L+ G C   ++ +A E   EM++ ++ P  V  F  +++ LCK G +    +
Sbjct: 470 PSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKD 529

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               M + G  PN+  +N L++G+C  GN+ EA +L   M    I P+ + Y  L+ G C
Sbjct: 530 IMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 589

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G+++ A  + + M  +G+    V Y+ ++ G  +      A  +  +M E G   ++ 
Sbjct: 590 KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH 649

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T+  ++ G C+    D A  L  ++   ++  D++ F  +I  + K G  +E   L+  +
Sbjct: 650 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI 709

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
               + P++ T S +I  L K      A N F+   +K+  G+ S + +L   I++ L  
Sbjct: 710 STYGLVPNIQTYSMMITNLIKEESYEEADNLFI-SVEKS--GHASDSRLL-NHIVRMLLN 765

Query: 486 DGQILKASKLFSDMRSDNL 504
             ++ KAS   S +  +NL
Sbjct: 766 KAEVAKASNYLSIIGENNL 784



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 14/423 (3%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           +++FN + +  I   N  VF+ LI A++  G +++A+ ++  ++   ++P       +++
Sbjct: 387 HNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 445

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            L + G+ D     +  MV  G+      YG LI  CC  G+++KA  L  EM++K I P
Sbjct: 446 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 505

Query: 153 TVVIY-TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
             V Y + +I+ LC E ++ E + +   M + G  PN+ T+N+LM+GYC V ++  A   
Sbjct: 506 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 565

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
              M    ++PN   +G L+DG CK G +  A   F  M   GV P   +Y+ ++ G  +
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           A     A  +  EM +   +  + TY +++ GLC     + A  LL+K++   +  +++T
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N +I    K G  ++A  +   ++  G+ PN+ T+S +I    K  + + A  L+  + 
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745

Query: 392 IKSLVPDVVVFTALIDGL------SKDGNMKETLRLYKEMLEA---KITPSVFTVSSLIH 442
                 D  +   ++  L      +K  N    +      LEA    +  S+F+   +I 
Sbjct: 746 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 805

Query: 443 GLF 445
           GLF
Sbjct: 806 GLF 808



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 34/339 (10%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN LID + +       +++   + K  + PD F+Y+ LI G    G+++ A  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M ++G+L  ++  NS+I   CK  +M+KA S+  +M + G+ P++ T+S +IDG CK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +  +D A  +  +MV     P+ + + +LI G S  G   E++R++K+M    + P+V  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 437 VSSLIHGLFKNGRISNALNFF---LEKTDKTD--------GGYCS--------------- 470
            +S IH LFK+GR + A   F   + K  K D         GY +               
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 471 -------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN  ++  +I A    G + KA  +F DM++  + PD  T+ T++  L R  R
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + D +     M+ +G+ P   +   +++G   +G+L  A
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 491



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 12/272 (4%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   F++L+  +  +G++EEA   L     I + P       L++G  K G+ D    
Sbjct: 540 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 599

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + +M+  G+    V Y +++           A  +F EMI+ G   ++  Y +++ GLC
Sbjct: 600 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 659

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             N   EA  +   +    V  ++ T+N ++    KV     A E +  +  + L PN+ 
Sbjct: 660 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 719

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID------GHCKAGNLFEAM 279
           T+ +++  L K      A N F+ + K G   +  + N ++          KA N    +
Sbjct: 720 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 779

Query: 280 ---SLCSEMEKFEISPDVFTYNILIKGLCGVG 308
              +L  E     +   +F+   +IKGL G  
Sbjct: 780 GENNLTLEASTISLLASLFSREGMIKGLFGTA 811


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 230/450 (51%), Gaps = 8/450 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWE 105
           F P V   + LI  F    ++++A+ V   +E    P + + NA+++G  K  + DS  +
Sbjct: 93  FKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQ 152

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            ++ M   G   DVVTY ++I   C +G +  A  + DE++  G +P+V+ YTILI    
Sbjct: 153 VFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATI 212

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E ++ EA  +F  +   G+ P+LYTYNA++ G CK    +RAL+F   +      P+VV
Sbjct: 213 LEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVV 272

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +L+                  M   G  PN+  ++ LI   C+ G + EA+++   M
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  ++PD ++Y+ LI   C  G+L+ A   L+KM  +G L ++V YN+++   CK G  
Sbjct: 333 KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           + AL V  ++ E G  P V  ++++       GN   A+ + +EM+ K + PD + + +L
Sbjct: 393 DLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSL 452

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I  L +DG + E + L  +M   +  P+V + + ++ G+ K  R+   +   +   +K  
Sbjct: 453 ISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKG- 511

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKL 495
              C PN   Y  +I+ + Y G   +A +L
Sbjct: 512 ---CLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 237/498 (47%), Gaps = 5/498 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           LLN   + GK +    F E +V  G   DVV    LI       ++ KA+ +  E+++  
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P V  Y  +I G    N++  A  +F  MR  G  P++ TYN ++   C    +  A 
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           E   E+L    +P+V+T+ +L++     G +  A   F  +   G+ P+++ YN +I G 
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G    A+     +     +PDV +YNIL++      + E  E L++ M   G   NV
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
           VT++ LI  +C+EG + +A++V   M EKG+ P+  ++  LI   CK G +D A+    +
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           MV    +PD+V +  ++  L K G     L +++++ E    P+V   +++   L+  G 
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
              AL    E   K       P+ + Y ++I  LC DG + +A  L  DM +   +P   
Sbjct: 427 KIKALEMISEMIRKG----IDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           ++  +L G+ +A R+ + + LL  M++ G +P+     +++ G    G    A   +  L
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542

Query: 570 KESRIGSSETEGHTTRSF 587
               + S ++     ++F
Sbjct: 543 YRLGVISGDSSKRLNKTF 560



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 42/350 (12%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
           PSV  ++ LI A    G I EAL ++ ++    + P +   NA++ G+ K+G  D   +F
Sbjct: 199 PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDF 258

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   G   DVV+Y +L+     +        L  +M+  G EP VV ++ILI   C 
Sbjct: 259 VRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCR 318

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           E ++ EA ++   M+E G+ P+ Y+Y+ L+  +CK   ++ A+E+  +M+     P++V 
Sbjct: 319 EGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVN 378

Query: 227 FGVLMDGLCKVG-------------------ELRAAGNFFV----------------HMA 251
           +  ++  LCK G                    +RA    F                  M 
Sbjct: 379 YNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMI 438

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL- 310
           + G+ P+   YN LI   C+ G + EA+ L  +ME     P V ++NI++ G+C   ++ 
Sbjct: 439 RKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVF 498

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           EG E LL  M ++G L N  +Y  LI+G    G   +A+ + + +   GV
Sbjct: 499 EGIE-LLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 38/312 (12%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++ +I    + G  + AL   R +      P + + N LL   + K +++      ++M
Sbjct: 238 TYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM 297

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           VL G   +VVT+ +LI   C +G V +A+N+ + M +KG+ P    Y  LI   C E ++
Sbjct: 298 VLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL 357

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKV--ADVN---------------------- 206
             A      M   G +P++  YN ++   CK   AD+                       
Sbjct: 358 DLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTM 417

Query: 207 -----------RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                      +ALE   EM+   + P+ +T+  L+  LC+ G +  A    V M     
Sbjct: 418 FSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRF 477

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +  +N ++ G CKA  +FE + L   M +    P+  +Y +LI+G+   G    A  
Sbjct: 478 QPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAME 537

Query: 316 LLQKMYKEGILA 327
           L   +Y+ G+++
Sbjct: 538 LANSLYRLGVIS 549


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 245/467 (52%), Gaps = 7/467 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N+L++G    G ++     +++M  CG++  V      I      G   +A  +FD M+ 
Sbjct: 157 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 216

Query: 148 KGIEPTVVIYTILIHG--LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           KG +P ++ Y+ ++HG     ++ + +  ++F  M   G+ PN + +N L++ Y +   +
Sbjct: 217 KGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 276

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           ++A+  + +M +  + P+ VTF  ++  LC++G L  A + F HM   GV P+  VY CL
Sbjct: 277 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 336

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY-NILIKGLCGVGQLEGAEGLLQKMYKEG 324
           I G C  G L +A  L SEM   +I P    Y + +I  LC  G++   + ++  M + G
Sbjct: 337 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTG 396

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              NVVT+NSL++GYC  G+ME+A ++   M   G+EPN   + +L+DG CK G ID A+
Sbjct: 397 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            ++ +M+ K + P  V+++ ++ GL +        +++ EM+E+  T S+ T   ++ GL
Sbjct: 457 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 516

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +N     A N  LEK    +  +   + + +  +I A+   G+  +A +LF  + +  L
Sbjct: 517 CRNNCTDEA-NMLLEKLFAMNVKF---DIITFNIVISAMFKVGRRQEAKELFDAISTYGL 572

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
            P+  TY+ M+  L++ +   +   L   + K G   D+ +   +VR
Sbjct: 573 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVR 619



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 243/520 (46%), Gaps = 11/520 (2%)

Query: 50  FNPSVFS-TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
             P  FS +LI  F + G +++A  ++ ++    VLP I  CN+++  L K  + D    
Sbjct: 45  LGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAES 104

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             ++MV  G+  D+ TY ++ID  C    + KA  + ++M++ G  P  + Y  LIHG  
Sbjct: 105 IVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYS 164

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
                 E+  +F+ M  CGV+P +   N+ +    K    N A   +  M+    +P+++
Sbjct: 165 ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII 224

Query: 226 TFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           ++  ++ G     +  L    N F  M   G+ PN  V+N LI+ + + G + +AM +  
Sbjct: 225 SYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 284

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           +M+   + PD  T+  +I  LC +G+L+ A      M   G+  +   Y  LI G C  G
Sbjct: 285 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 344

Query: 344 DMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           ++ KA  + S+M  K +  P V  FSS+I+  CK G +     +   MV     P+VV F
Sbjct: 345 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 404

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +L++G    GNM+E   L   M    I P+ +   +L+ G  KNGRI +AL  F +   
Sbjct: 405 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 464

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           K       P  VLY+ I+  L    +   A K+F +M          TY  +L GL R  
Sbjct: 465 KG----VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 520

Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              +  MLL  +  M +  D +   +++    + G  + A
Sbjct: 521 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 560



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 228/477 (47%), Gaps = 14/477 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I   N L++   +  + D        ++  GL  D  +Y  LI      G+V KA  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F EM+++G+ P ++I   +I  LC   +M +AES+ + M + G+ P+L+TY+ ++DG CK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +++A     +M+    +PN +T+  L+ G    G    +   F  M+  GV P +  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ--LEGAEGLLQK 319
            N  I    K G   EA  +   M      PD+ +Y+ ++ G        L     +   
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +GI  N   +N LI+ Y + G M+KA+ +   M  KG+ P+ VTF+++I   C+ G 
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVS 438
           +D A+  +  MV   + P   V+  LI G    G + +   L  EM+   I  P V   S
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 439 SLIHGLFKNGRIS---NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           S+I+ L K GR++   + ++  ++   +       PN V + ++++  C  G + +A  L
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQR-------PNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
              M S  + P+   Y T++ G  +  R+ D + +  DM+  G+ P +V+  +++ G
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 211/445 (47%), Gaps = 6/445 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +LIDC          L +   ++  G+ P    Y+ LI+G   + ++ +A  +F  M
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 74

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
            E GV+P +   N+++   CK+ ++++A     +M+   + P++ T+ +++DGLCK   +
Sbjct: 75  MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 134

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A      M + G  PN   YN LI G+  +G   E++ +  +M    + P V   N  
Sbjct: 135 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 194

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD--MEKALSVCSQMTEK 358
           I  L   G+   A+ +   M  +G   ++++Y++++ GY    D  +    ++ + M  K
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN   F+ LI+   + G +D AM ++ +M  K ++PD V F  +I  L + G + + 
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           L  +  M++  + PS      LI G   +G +  A     E  +K       P    +++
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD---IPPPGVKYFSS 371

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           II  LC +G++ +   +   M     RP+  T+ +++ G      M +   LL  M  +G
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431

Query: 539 IVPDAVINQVMVRGYQENGDLKSAF 563
           I P+  I   +V GY +NG +  A 
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDAL 456



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/533 (24%), Positives = 243/533 (45%), Gaps = 49/533 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +++LI  +S  G   E++ V++++    V+P +  CN+ ++ L K G+ +     +
Sbjct: 152 NSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIF 211

Query: 108 EEMVLCGLVADVVTYGVLI-------DCC------------------------------- 129
           + MVL G   D+++Y  ++       D C                               
Sbjct: 212 DSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYA 271

Query: 130 -CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            CG  D  KA+ +F++M +KG+ P  V +  +I  LC   ++ +A   F  M + GV P+
Sbjct: 272 RCGMMD--KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 329

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP-NVVTFGVLMDGLCKVGELRAAGNFF 247
              Y  L+ G C   ++ +A E   EM++ ++ P  V  F  +++ LCK G +    +  
Sbjct: 330 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 389

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G  PN+  +N L++G+C  GN+ EA +L   M    I P+ + Y  L+ G C  
Sbjct: 390 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 449

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
           G+++ A  + + M  +G+    V Y+ ++ G  +      A  +  +M E G   ++ T+
Sbjct: 450 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTY 509

Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
             ++ G C+    D A  L  ++   ++  D++ F  +I  + K G  +E   L+  +  
Sbjct: 510 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIST 569

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P++ T S +I  L K      A N F+   +K+  G+ S + +L   I++ L    
Sbjct: 570 YGLVPNIQTYSMMITNLIKEESYEEADNLFIS-VEKS--GHASDSRLL-NHIVRMLLNKA 625

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
           ++ KAS   S +  +NL  +  T + +     R  +  + + LL   + M +V
Sbjct: 626 EVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPANMTMAVV 678



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 34/339 (10%)

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P I  YN LID + +       +++   + K  + PD F+Y+ LI G    G+++ A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
             +M ++G+L  ++  NS+I   CK  +M+KA S+  +M + G+ P++ T+S +IDG CK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           +  +D A  +  +MV     P+ + + +LI G S  G   E++R++K+M    + P+V  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 437 VSSLIHGLFKNGRISNALNFF---LEKTDKTD--------GGYCS--------------- 470
            +S IH LFK+GR + A   F   + K  K D         GY +               
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 471 -------PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  PN  ++  +I A    G + KA  +F DM++  + PD  T+ T++  L R  R
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + D +     M+ +G+ P   +   +++G   +G+L  A
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 349



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 197/443 (44%), Gaps = 44/443 (9%)

Query: 36  YSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLN 92
           +++FN + +  I   N  VF+ LI A++  G +++A+ ++  ++   ++P       +++
Sbjct: 245 HNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK---- 148
            L + G+ D     +  MV  G+      YG LI  CC  G+++KA  L  EM++K    
Sbjct: 304 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 149 --------------------------------GIEPTVVIYTILIHGLCNENKMVEAESM 176
                                           G  P VV +  L+ G C    M EA ++
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   G+ PN Y Y  L+DGYCK   ++ AL  + +MLH  ++P  V + +++ GL +
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
                AA   F  M + G   +I  Y  ++ G C+     EA  L  ++    +  D+ T
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +NI+I  +  VG+ + A+ L   +   G++ N+ TY+ +I    KE   E+A ++   + 
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           + G   +    + ++        +  A    + +   +L  +    + L    S++G  +
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 663

Query: 417 ETLRLYKEMLEAKITPSVFTVSS 439
           E ++L    L A +T +V   ++
Sbjct: 664 EHIKL----LPANMTMAVVAATA 682


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 269/586 (45%), Gaps = 42/586 (7%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           F  +AN+  +K+       + + L   R    + Y +   L  LE    N  +F  +I A
Sbjct: 60  FKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLL--QLMKLEGISCNEDLFVIVINA 117

Query: 62  FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G  E+AL  + +I      P+++  N +L+ L+ + KF  +   Y  M   G+  +
Sbjct: 118 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 177

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V TY +L+   C    V  A  L  EM  KG  P  V YT ++  +C   K+ EA  +  
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL-- 235

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           SMR    VP    YNAL++G+C+   +    E ++EM    + P+V+T+  +++ L ++G
Sbjct: 236 SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A      M   G  PN+  +  L+ G+   G L EA+ L + M +    P+   YN
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI GLC  G++  A  + QKM + G+  N  TY++LIDG+ K GD+  A  + ++M   
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  PNVV ++ ++D  C+    + A+ L   M   +  P+ + F   I GL   G  +  
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD---KTD--------GG 467
           +++  +M +    P+V T + ++ GLF   R   AL    E  +   K++         G
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532

Query: 468 YC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRP 506
           +C                     P+ + Y  +I A C  G++  A +L   + +     P
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYP 592

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           D  TYT++L G+     + + ++ L  MI  GI P+      +VRG
Sbjct: 593 DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 268/546 (49%), Gaps = 17/546 (3%)

Query: 25  LLKSRKPHHVCYSVFNALNSLEIPKFNPSVF--STLIIAFSEMGHIEEALWVYRKIEVLP 82
           LLK +KP  +   V N +N L+  + + ++   S ++       +I  AL  ++ I    
Sbjct: 10  LLKKQKP--LVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSN 67

Query: 83  AIQACNALLNGLIKKGKF----DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           + +        +IK+  +    D +    + M L G+  +   + ++I+     G   +A
Sbjct: 68  SFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQA 127

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           L  F  + + G +P+V IY  ++  L +ENK      ++ +M+  G+  N+YTYN L+  
Sbjct: 128 LKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKA 187

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   V+ A +   EM +    P+ V++  ++  +C++G++  A    + +  F     
Sbjct: 188 LCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF----- 242

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           + VYN LI+G C+   + E   L +EM    I PDV TY+ +I  L  +G +E A  +L 
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM+  G   NV T+ SL+ GY   G + +AL + ++M ++G EPN V +++LI G C  G
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +  A+ +  +M    + P+   ++ LIDG +K G++     ++ +M+     P+V   +
Sbjct: 363 KMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            ++  L +N   ++AL+      +    G C PN + +   I+ LC  G+   A K+ + 
Sbjct: 423 CMVDVLCRNSMFNHALHLI----ENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ 478

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           MR     P+  TY  +L GL  AKR  + + ++ ++ +M I  + V    ++ G+   G 
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538

Query: 559 LKSAFR 564
            K A +
Sbjct: 539 FKGALQ 544



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 217/430 (50%), Gaps = 7/430 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++T++ +   +G +EEA  +  +I+    +   NAL+NG  ++ K + V+E + EM + G
Sbjct: 216 YTTVVSSMCRLGKVEEARELSMRIKSF--VPVYNALINGFCREHKMEEVFELFNEMAVEG 273

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  DV+TY  +I+     G+V  AL +  +M  +G  P V  +T L+ G     ++ EA 
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            ++  M + G  PN   YN L+ G C    +  A+    +M  + + PN  T+  L+DG 
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGF 393

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
            K G+L  A   +  M   G  PN+ VY C++D  C+      A+ L   M      P+ 
Sbjct: 394 AKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNT 453

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            T+N  IKGLC  G+ E A  +L +M + G   NV TYN ++DG        +AL +  +
Sbjct: 454 ITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGE 513

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + E  ++ N+VT+++++ G C AG    A+ +  ++++    PD + +  +I    K G 
Sbjct: 514 IEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGE 573

Query: 415 MKETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           +K  ++L   +  + +  P VFT +SL+ G+     +  A+   L+K    + G C PN 
Sbjct: 574 VKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAV-VHLDKM--INEGIC-PNR 629

Query: 474 VLYAAIIQAL 483
             + A+++ L
Sbjct: 630 ATWNALVRGL 639



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 212/471 (45%), Gaps = 9/471 (1%)

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
           +TY  +I     + D+     L   M  +GI     ++ I+I+         +A   F  
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
           + E G  P++  YN ++D              Y+ M    ++ NV T+ +L+  LCK   
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNI 299
           + AA      M+  G  P+   Y  ++   C+ G + EA  L   ++ F     V  YN 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNA 248

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           LI G C   ++E    L  +M  EGI  +V+TY+++I+   + G++E AL+V ++M  +G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             PNV TF+SL+ G    G +  A+ L+  M+ +   P+ V +  LI GL   G M E +
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
            + ++M    + P+  T S+LI G  K G +  A   +    +K     C PN V+Y  +
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIW----NKMITNGCLPNVVVYTCM 424

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
           +  LC +     A  L  +M + N  P+  T+ T ++GL  + +    M +L  M + G 
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484

Query: 540 VPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
            P+      ++ G       + A +    ++E  I S+    +T  S   H
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 202/363 (55%), Gaps = 4/363 (1%)

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           +VTY  LI   C +G + +A  + + M DKG++P++  Y  +I+GLC + +   A+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
            M   G+ P+  TYN L+   C+  + + A E + EML   + P++V+F  LM    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            L  A  +F  M KFG+ P+  +Y  L+ G+C+ GN+ EA+ +  EM +     DV  YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            ++ GLC    L  A+ L  +M + G L +  T+ +LI G+C++G+M KALS+   MT++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
            ++P++V +++LIDG CK G ++ A  L+  M+ + + P+ + +  LI+     G++ E 
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL+  M+E  I P++ T +++I G  ++G  S A  F      K      +P+H+ Y  
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG----VAPDHISYNT 356

Query: 479 IIQ 481
           +I 
Sbjct: 357 LIN 359



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 190/357 (53%), Gaps = 3/357 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI A+   G +EEA  +   +    + P++   NA++NGL KKG++        EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  GL  D  TY  L+   C + +  +A  +F EM+ +G+ P +V ++ L+        +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A   FR M++ G+VP+   Y  LM GYC+  ++  AL+   EML      +V+ +  +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GLCK   L  A   F  M + G  P+ + +  LI GHC+ GN+ +A+SL   M +  I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PD+  YN LI G C VG++E A  L   M    I  N +TY  LI+ YC  G + +A  
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           +   M EKG++P +VT +++I G C++G+   A      M+ K + PD + +  LI+
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 4/356 (1%)

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
           + TYN L+  YC+   +  A E  + M    L+P++ T+  +++GLCK G    A    +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M   G+ P+   YN L+   C+  N  EA  +  EM +  + PD+ +++ L+       
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
            L+ A    + M K G++ + V Y  L+ GYC+ G+M +AL +  +M E+G   +V+ ++
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           ++++G CK   +  A  L+ EMV +  +PD   FT LI G  +DGNM + L L+  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            I P +   ++LI G  K G +  A   +    D        PNH+ Y  +I A C  G 
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELW----DGMISRKIFPNHITYGILINAYCSVGH 296

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           + +A +L+  M    ++P   T  T+++G  R+         L  MI  G+ PD +
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 352



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 177/355 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+    ++G  +  +E    M   GL   + TY  +I+  C +G   +A  +  EM++
Sbjct: 5   NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 64

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+ P    Y  L+   C  +   EA+ +F  M   GVVP+L ++++LM  + +   +++
Sbjct: 65  IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL ++ +M    L P+ V + VLM G C+ G +  A      M + G   ++  YN +++
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 184

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G CK   L +A  L  EM +    PD +T+  LI G C  G +  A  L   M +  I  
Sbjct: 185 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 244

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           ++V YN+LIDG+CK G+MEKA  +   M  + + PN +T+  LI+  C  G++  A  L+
Sbjct: 245 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 304

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
             M+ K + P +V    +I G  + G+  +       M+   + P   + ++LI+
Sbjct: 305 DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 181/346 (52%), Gaps = 7/346 (2%)

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           +VT+  L+   C+ G L  A      MA  G+ P++F YN +I+G CK G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
           EM    +SPD  TYN L+   C       A+ +  +M ++G++ ++V+++SL+  + +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            +++AL     M + G+ P+ V ++ L+ G C+ GN+  A+ +  EM+ +  V DV+ + 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            +++GL K+  + +  +L+ EM+E    P  +T ++LIHG  ++G ++ AL+ F   T +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                  P+ V Y  +I   C  G++ KAS+L+  M S  + P++ TY  ++        
Sbjct: 241 N----IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           + +   L   MI+ GI P  V    +++GY  +GD   A    EFL
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA---DEFL 339



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 4/314 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN LI  +C+ G L EA  + + M    + P +FTYN +I GLC  G+   A+G+L +M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G+  +  TYN+L+   C+  +  +A  +  +M  +GV P++V+FSSL+    +  ++
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+  + +M    LVPD V++T L+ G  ++GNM E L++  EMLE      V   +++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++GL K   +++A   F E  ++       P+   +  +I   C DG + KA  LF  M 
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERG----ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             N++PD   Y T++ G  +   M     L   MI   I P+ +   +++  Y   G + 
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298

Query: 561 SAFRCSEFLKESRI 574
            AFR  + + E  I
Sbjct: 299 EAFRLWDVMIEKGI 312


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 224/444 (50%), Gaps = 42/444 (9%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           ++P VF  L+ A+  MG + E L  +R+   +  +P +   N LLNGL+K    D  WE 
Sbjct: 231 WDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEV 290

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           YEEM   G+  ++ T+ +L    C  GD  K     ++M ++G +P +V Y  LI+  C 
Sbjct: 291 YEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCR 350

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + ++ +A  +++ M   GVVP+L +Y ALM+G CK   V  A + +H M+H  L P++VT
Sbjct: 351 KGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVT 410

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  L+ G CK G+++ + +    M   G+ P+ F    L++G+ K G    A++L  E++
Sbjct: 411 YNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQ 470

Query: 287 KF--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           +F   IS D+++Y  LI  LC   +   A+ LL++M ++G    +  YN LI  +C+   
Sbjct: 471 RFGVSISQDIYSY--LIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDC 528

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLID-------------------------------- 372
           + +AL +  +M +K ++PN+ T+ ++J                                 
Sbjct: 529 IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRA 588

Query: 373 ---GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
              G C+  +ID A  L +    +  + D   F ALI   S  G++  +L +   ML+  
Sbjct: 589 LFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMG 648

Query: 430 ITPSVFTVSSLIHGLFKNGRISNA 453
           + P+  T   +I GL+K  R+ +A
Sbjct: 649 LLPNPLTCKYVIDGLWKARRVDSA 672



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 226/510 (44%), Gaps = 65/510 (12%)

Query: 124 VLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
           VL+ C   Q D   AL+ F+ +  D G+ P+   Y I++H L       +A         
Sbjct: 151 VLLRC---QSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFL----- 202

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
           C +V        L+       DV + L    E    N  P  V F +L+    ++G +R 
Sbjct: 203 CELV-------ELVKDDLPGEDVFKNLILCTE--DCNWDP--VVFDMLVKAYLRMGRVRE 251

Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
               F  M + G  P +   N L++G  K         +  EME+F I+P+++T+NIL  
Sbjct: 252 GLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTH 311

Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
            LC  G        L+KM +EG   ++VTYN+LI+ YC++G ++ A  +   M  +GV P
Sbjct: 312 VLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVP 371

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           ++V++++L++G CK G +  A  L+  MV + L PD+V +  LI G  K+G M+E+  L 
Sbjct: 372 DLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLL 431

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            +M+   I+P  FT   L+ G  K G+  +ALN  +E          S +  +Y+ +I A
Sbjct: 432 HDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVE----LQRFGVSISQDIYSYLIVA 487

Query: 483 LCYDGQILKASKLFSDMRSD-----------------------------------NLRPD 507
           LC + +   A  L   M  D                                    ++P+
Sbjct: 488 LCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             TY  +J  L R  R ++   L+ +M+  G +PD  I + +  GY    D+  A     
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS 607

Query: 568 FLKESRIGSSETEGHTTRSFLGHLKPTVYK 597
           F       + E + H T SF   ++ T  K
Sbjct: 608 FX------AKEFQIHDTESFNALIRITSAK 631



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 214/461 (46%), Gaps = 8/461 (1%)

Query: 105 EFYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           + ++ ++LC      D V + +L+      G V + L  F  M+  G  PTV+    L++
Sbjct: 217 DVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLN 276

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GL   N       ++  M   G+ PNLYT+N L    CK  D  +  +F  +M      P
Sbjct: 277 GLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDP 336

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           ++VT+  L++  C+ G L  A   +  M + GV P++  Y  L++G CK G + EA  L 
Sbjct: 337 DIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLF 396

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
             M    +SPD+ TYN LI G C  G+++ +  LL  M   GI  +  T   L++GY KE
Sbjct: 397 HRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKE 456

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G    AL++  ++   GV  +   +S LI   C+     AA  L   M       ++ ++
Sbjct: 457 GKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIY 516

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             LI    +   + E L L  EM++ +I P++ T  ++J  L    R+S ++       +
Sbjct: 517 NELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCL---SRLSRSMEGESLVGE 573

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
               G   P+  +  A+    C +  I KA  L S    +    D  ++  ++R +  AK
Sbjct: 574 MVASGXL-PDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIR-ITSAK 631

Query: 523 RMLDVMMLLAD-MIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +   + + D M+KMG++P+ +  + ++ G  +   + SA
Sbjct: 632 GDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 217/497 (43%), Gaps = 20/497 (4%)

Query: 73  WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           WV   + + P+ Q    +++ L     F    +F     LC LV       ++ D   G+
Sbjct: 168 WVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKF-----LCELVE------LVKDDLPGE 216

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
            DV K L L  E  D   +P  V++ +L+       ++ E    FR M   G VP + T 
Sbjct: 217 -DVFKNLILCTE--DCNWDP--VVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 271

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L++G  K+   +R  E Y EM    + PN+ TF +L   LCK G+      F   M +
Sbjct: 272 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 331

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  P+I  YN LI+ +C+ G L +A  L   M +  + PD+ +Y  L+ GLC  G++  
Sbjct: 332 EGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE 391

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  L  +M   G+  ++VTYN+LI GYCKEG M+++ S+   M   G+ P+  T   L++
Sbjct: 392 AHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVE 451

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G  K G   +A+ L  E+    +     +++ LI  L ++        L + M +     
Sbjct: 452 GYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKX 511

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
            +   + LI    +   I+ AL   +E  DK       PN   Y A+J  L    + ++ 
Sbjct: 512 ELEIYNELIKSFCQCDCIAEALLLKMEMVDKE----IKPNLATYRAVJGCLSRLSRSMEG 567

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L  +M +    PD      +  G  R   +     LL+   K   + D      ++R 
Sbjct: 568 ESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRI 627

Query: 553 YQENGDLKSAFRCSEFL 569
               GD+  +    + +
Sbjct: 628 TSAKGDIARSLEIQDMM 644


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 222/448 (49%), Gaps = 8/448 (1%)

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           DVV+Y  +ID    +GDV KA   + EM+D+ + P  V Y  +I  L     M  A  + 
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M    V+PN +TYN++M GYC      +A+  + +M    ++P+VVT+  LMD LCK 
Sbjct: 70  TVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
           G+   A   F  M K G+ P+I  Y  L+ G+   G L E   L + M +  +  D   +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           NILI       +++    +  KM ++G+  N V Y ++IDG CK G ++ A+    QM +
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           KG+ PNVV ++SLI   C     + A  L  E++ + + P++V F  ++D L K+G + E
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
           + +L+  +    + P V T S+LI G    G++  A+      T     G   P+ V Y+
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL---TGMVSVG-LKPDSVTYS 361

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I   C   ++  A  LF +M S+ + PD  TY  +L GL R +R      L A + + 
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRC 565
           G   +     +++  + +   L   F C
Sbjct: 422 GTQLELSTYNIILMDFAKTNSLMMHFGC 449



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 209/411 (50%), Gaps = 7/411 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++T+I    + G +++A   Y ++    V P     N+++  L K    D   E    MV
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV 73

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
           +     +  TY  ++   C  G   KA+ +F +M   GIEP VV Y  L+  LC   K  
Sbjct: 74  M----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCT 129

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +F SM + G+ P++ TY  L+ GY     +    +    M+ + +Q +   F +L+
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
               K  ++      F  M + G+ PN   Y  +IDG CK G L +AM    +M    ++
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V  Y  LI  LC   + E AE L+ ++  +GI  N+V +N+++D  CKEG + ++  +
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +   GV P+V+T+S+LIDG C AG +D AM L T MV   L PD V ++ LI+G  K
Sbjct: 310 FDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCK 369

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
              M++ L L+KEM    + P + T + ++HGLF+  R + A   +   T+
Sbjct: 370 INRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITE 420



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 207/409 (50%), Gaps = 9/409 (2%)

Query: 145 MIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           M D G   P VV Y  +I GL  E  + +A   +  M +  V P+  TYN+++    K  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            ++RA+E    M+     PN  T+  +M G C  G+   A   F  M   G+ P++  YN
Sbjct: 61  AMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L+D  CK G   EA  +   M K  + PD+ TY  L+ G    G L     LL  M + 
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  +   +N LI  Y K+  +++ + V S+M ++G+ PN V + ++IDG CK G +D A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           M  + +M+ K L P+VVV+T+LI  L      ++   L  E+L+  I P++   ++++  
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L K GR+  +   F    D       +P+ + Y+ +I   C  G++  A KL + M S  
Sbjct: 297 LCKEGRVIESKKLF----DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           L+PD+ TY+T++ G  +  RM D + L  +M   G+ PD +   +++ G
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHG 401



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 197/375 (52%), Gaps = 1/375 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
            ++++I A S+   ++ A+ V   + V+P     N++++G    G+ +     + +M   
Sbjct: 48  TYNSIIAALSKAQAMDRAMEVL-TVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD 106

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           G+  DVVTY  L+D  C  G   +A  +FD M+ +G++P +  Y  L+HG  ++  +VE 
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             +   M + G+  + + +N L+  Y K   V+  +  + +M    L PN V +  ++DG
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LCK+G L  A   F  M   G+ PN+ VY  LI   C      +A  L  E+    I+P+
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
           +  +N ++  LC  G++  ++ L   +   G+  +V+TY++LIDGYC  G M+ A+ + +
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLT 346

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M   G++P+ VT+S+LI+G CK   ++ A+ L+ EM    + PD++ +  ++ GL +  
Sbjct: 347 GMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTR 406

Query: 414 NMKETLRLYKEMLEA 428
                  LY  + E+
Sbjct: 407 RTAAAKELYARITES 421



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 194/367 (52%), Gaps = 8/367 (2%)

Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
           P++ +YN ++DG  K  DV++A   YHEML   + P+ VT+  ++  L K   +  A   
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
              M    V PN F YN ++ G+C +G   +A+ +  +M    I PDV TYN L+  LC 
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+   A  +   M K G+  ++ TY +L+ GY  +G + +   + + M + G++ +   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           F+ LI    K   +D  + ++++M  + L P+ V +  +IDGL K G + + +  +++M+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           +  +TP+V   +SLIH L    +   A     E  D+      +PN V +  I+ +LC +
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQG----INPNIVFFNTILDSLCKE 300

Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
           G+++++ KLF  +    + PD  TY+T++ G   A +M   M LL  M+ +G+ PD+V  
Sbjct: 301 GRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360

Query: 547 QVMVRGY 553
             ++ GY
Sbjct: 361 STLINGY 367



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 8/163 (4%)

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           PDVV +  +IDGL K+G++ +    Y EML+ +++P   T +S+I  L K   +  A+  
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                         PN   Y +I+   C  GQ  KA  +F  M SD + PD  TY +++ 
Sbjct: 69  LTVMV--------MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            L +  +  +   +   M+K G+ PD      ++ GY   G L
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGAL 163


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/410 (33%), Positives = 212/410 (51%), Gaps = 9/410 (2%)

Query: 3   YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLIIA 61
           + L   +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI A
Sbjct: 16  HFLCTHQMFSEAKSLIQVVV-----SRKGKGSAXAVFAAILETKGTQRSDIYVFSGLITA 70

Query: 62  FSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           + E G + +A+  YR   + ++      C  +L  L+K   F  VW FYEE++ CG  A 
Sbjct: 71  YLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPAS 130

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           +  + +L+   C  GD+  A  +FD +   G+ P+VV Y  L++G      + E   +  
Sbjct: 131 LYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 190

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           +MR  GV P++YTY+ L++G CK + ++ A E + EML   L PN VTF  L+DG CK G
Sbjct: 191 AMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNG 250

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A   +  M    + P+J  YN L+ G CK G+L +A  L  EM    + PD FTY 
Sbjct: 251 RVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYT 310

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G L+ A    ++M +E I  + V Y +LI G C+EG    A  +  +M   
Sbjct: 311 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSV 370

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           G++P+  T++ +I+  CK G++     L  EM     VP VV +  L++G
Sbjct: 371 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 188/371 (50%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE  +     T   +++   K+    
Sbjct: 54  KGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFK 113

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A   F  + K+G+ P++  YN L+
Sbjct: 114 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLM 173

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PDV+TY++LI GLC    ++ A  L  +M  +G++
Sbjct: 174 NGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLV 233

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++L+ G CK G+++ A GL
Sbjct: 234 PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGL 293

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM  K L PD   +T LIDG  K+G++       K M++  I       ++LI GL +
Sbjct: 294 IDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQ 353

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+   Y  II   C  G + K SKL  +M+ +   P
Sbjct: 354 EGRSXDAEKMLREMLSVG----LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 410 XVVTYNVLMNG 420



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVV---------------PNLYTYNA 194
           T+  Y   IH LC      EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 7   TLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFSG 66

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H L     T   +++ L K+   +    F+  + + G
Sbjct: 67  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 126

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A  +   + K+ + P V +YN L+ G   +G L+   
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 187 RLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGH 246

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ + L+PD++ +  L+ GL K G++ +   L  EM    + P  
Sbjct: 247 CKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDK 306

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT ++LI G  K G +  A     E   +        + V Y A+I  LC +G+   A K
Sbjct: 307 FTYTTLIDGCCKEGDLDAA----FEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEK 362

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 363 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 121 EILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLG 180

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K   + +A   F E   K       PN 
Sbjct: 181 DLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKG----LVPNX 236

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S  L PD  TY T++ GL +   +     L+ +
Sbjct: 237 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDE 296

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD      ++ G  + GDL +AF
Sbjct: 297 MXXKGLKPDKFTYTTLIDGCCKEGDLDAAF 326


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 250/500 (50%), Gaps = 20/500 (4%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           + EAL  + ++   +  PA+   N L   L KK ++  V      M   GL+ + ++  +
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           L++C C    V +   +F  ++ KG  P    +T L+ GLC E K+ EA  +F+ M    
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH------NLQPNVVTFGVLMDGLCKVG 238
             P+  T   L+ G C+  +   AL+ +  M++       N +P VV++  ++D LCK G
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  A  FFV M + G+FPN+  Y  L+ G C A    EA  L  EM    + PDV T++
Sbjct: 268 LVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
           +LI  LC VG+++ A GL   M +  +  +  TYN LI+GYC  G +++   +   M  K
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNK 387

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
             + +  ++S L+   CK   +  AM LY EM+ + + P V+ ++ + D     G ++  
Sbjct: 388 RCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQ-- 445

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
              +++M+   I+ S++ V   + GL KNG +S AL+ F       +    + N  ++ +
Sbjct: 446 ---FQDMVLDSISYSIYNV--YLDGLCKNGCVSEALDVFY----GLENCKFASNVAIFNS 496

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  +C   ++  A +LF+ + ++ L+PD  TYT M+ GL +  +      L  +M + G
Sbjct: 497 LINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKG 556

Query: 539 IVPDAVINQVMVRGYQENGD 558
             P+ V    ++RG   N +
Sbjct: 557 CAPNVVTFNTLMRGLCLNSE 576



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 179/372 (48%), Gaps = 28/372 (7%)

Query: 78  IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
           I   P + + + +++ L K G  +   EF+ EM   G+  +VVTY  L+   C   +  +
Sbjct: 247 INCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEE 306

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A  LF EM+D G+ P VV +++LI  LC   K+ EA  +F  M +  V P+  TYN L++
Sbjct: 307 AKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIE 366

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           GYC    V+   + +  M++   Q +  ++ +LM   CK  E+  A   +  M   G+ P
Sbjct: 367 GYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQP 426

Query: 258 NIF----------------------------VYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            +                             +YN  +DG CK G + EA+ +   +E  +
Sbjct: 427 TVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCK 486

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            + +V  +N LI G+C   +LE A  L  ++  E +  +VVTY  +I G CK G  +KA 
Sbjct: 487 FASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAY 546

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M EKG  PNVVTF++L+ G C        + L  +M  + L PD      ++D L
Sbjct: 547 DLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDIL 606

Query: 410 SKDGNMKETLRL 421
            KD N  E L L
Sbjct: 607 LKDENYHECLNL 618


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEA--LWVYRKIEVLP-AIQACNALLNG 93
           + F A  SL +      V   ++ AF E G + EA  + +  +   LP  ++  N +L  
Sbjct: 91  TAFVARGSLPMAH---EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRV 147

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
            ++ G F    + ++ M   G+  D  ++  L+  CC +G V +   L   M   G    
Sbjct: 148 GLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLD 207

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
               T+++  LC + +  +    FR M E G  PN+  Y A +DG CK   V +A     
Sbjct: 208 NATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE 267

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKA 272
           EM+   L+PNV T   L+DGLCK+G    A   F+ + K   + PN+  Y  +I G+C+ 
Sbjct: 268 EMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCRE 327

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L  A  L   M +  + P+  TY  LI G C  G  + A  L+ KM +EG L N+ TY
Sbjct: 328 GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 387

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N++IDG+CK+G +++A  V    T +G++ + +T++ LI   CK G+I  A+ L+  MV 
Sbjct: 388 NAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE 447

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
               PD+  +T+LI    +   M+E+ + + + L   + P+  T +S+I G  K GR + 
Sbjct: 448 NGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTM 507

Query: 453 ALNFF 457
           AL  F
Sbjct: 508 ALRVF 512



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 180/349 (51%), Gaps = 1/349 (0%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P  ++  AL+    ++GK + V      M   G   D  T  V++   C +G      
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
             F  M++ G  P VV YT  I GLC    + +A  +   M   G+ PN+YT+  L+DG 
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 200 CKVADVNRALEFYHEMLHHN-LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           CK+    RA   + +++  +  +PNV T+ V++ G C+ G+L  A    V M + G+ PN
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
              Y  LI GHCK G+   A  L ++M++    P+++TYN +I G C  G+++ A  +L+
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
               +G+  + +TY  LI  +CK+G +  AL +  +M E G  P++  ++SLI   C+  
Sbjct: 409 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 468

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
            ++ +   + + ++  L+P    +T++I G  K G     LR+++ M++
Sbjct: 469 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQ 517



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 192/414 (46%), Gaps = 5/414 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G + +A ++  EM   G+   V     ++         V A  +F  M   GV P+  ++
Sbjct: 117 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 176

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
            AL+   C+   V         M  +    +  T  V++  LC+ G  +    FF  M +
Sbjct: 177 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 236

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN+  Y   IDG CK   + +A  +  EM    + P+V+T+  LI GLC +G  E 
Sbjct: 237 MGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 296

Query: 313 AEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L  K+ K      NV TY  +I GYC+EG + +A  +  +M E+G++PN  T+++LI
Sbjct: 297 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 356

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
            G CK G+ D A  L  +M  +  +P++  + A+IDG  K G ++E  ++ +      + 
Sbjct: 357 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 416

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T + LI    K G I+ AL+ F    D+     C P+   Y ++I   C   Q+ +
Sbjct: 417 FDKITYTILITEHCKQGHITYALDLF----DRMVENGCCPDIEAYTSLISTYCQQRQMEE 472

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           + K F       L P   TYT+M+ G  +  R    + +   M++ G   D+++
Sbjct: 473 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSIL 526



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 169/354 (47%), Gaps = 10/354 (2%)

Query: 55  FSTLIIAFSEMGHIEE------ALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           F  L++     G +EE      A+W Y    +  A   C  ++  L +KG+F  V EF+ 
Sbjct: 176 FRALVVVCCREGKVEEVDALLAAMWRY-GFSLDNA--TCTVVVRSLCEKGRFKDVSEFFR 232

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            M+  G   +VV Y   ID  C +  V +A ++ +EM+ +G++P V  +T LI GLC   
Sbjct: 233 RMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 292

Query: 169 KMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
               A  +F + ++     PN++TY  ++ GYC+   + RA      M+   L+PN  T+
Sbjct: 293 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 352

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ G CK G    A      M + G  PNI+ YN +IDG CK G + EA  +      
Sbjct: 353 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 412

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             +  D  TY ILI   C  G +  A  L  +M + G   ++  Y SLI  YC++  ME+
Sbjct: 413 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 472

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
           +     +    G+ P   T++S+I G CK G    A+ ++  MV      D ++
Sbjct: 473 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSIL 526



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++  + +   +  A +   EM  H L   V T   ++    + G    A   F  M +
Sbjct: 107 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 166

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            GV P+   +  L+   C+ G + E  +L + M ++  S D  T  ++++ LC  G+ + 
Sbjct: 167 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 226

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                ++M + G   NVV Y + IDG CK   +++A  V  +M  +G++PNV T ++LID
Sbjct: 227 VSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 286

Query: 373 GQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           G CK G  + A  L+ +++   S  P+V  +T +I G  ++G +     L   M+E  + 
Sbjct: 287 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 346

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P+  T ++LI G  K G    A  F L    K +G    PN   Y A+I   C  G+I +
Sbjct: 347 PNTNTYTTLIGGHCKGGSFDRA--FELMNKMKQEGFL--PNIYTYNAVIDGFCKKGKIQE 402

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A K+     S  L+ D  TYT ++    +   +   + L   M++ G  PD      ++ 
Sbjct: 403 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462

Query: 552 GYQENGDLKSA 562
            Y +   ++ +
Sbjct: 463 TYCQQRQMEES 473



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           +AG L EA  +  EM    +   V T N +++     G    A  +   M + G+  +  
Sbjct: 115 EAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDER 174

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           ++ +L+   C+EG +E+  ++ + M   G   +  T + ++   C+ G        +  M
Sbjct: 175 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 234

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +     P+VV +TA IDGL K   +K+   + +EM+   + P+V+T ++LI GL K G  
Sbjct: 235 LEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 294

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A   FL+    +      PN   Y  +I   C +G++ +A  L   M    L+P+  T
Sbjct: 295 ERAFRLFLKLIKSSS---YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 351

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           YTT++ G  +         L+  M + G +P+      ++ G+ + G ++ A++
Sbjct: 352 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 405



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 5/266 (1%)

Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
            G+L  A  ++ +M   G+   V T N ++    + G    A  V   MT  GV P+  +
Sbjct: 116 AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERS 175

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           F +L+   C+ G ++    L   M       D    T ++  L + G  K+    ++ ML
Sbjct: 176 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 235

Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
           E    P+V   ++ I GL K   +  A +   E      G    PN   +  +I  LC  
Sbjct: 236 EMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV----GRGLKPNVYTHTTLIDGLCKI 291

Query: 487 GQILKASKLFSDM-RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
           G   +A +LF  + +S + +P+  TYT M+ G  R  ++    MLL  M++ G+ P+   
Sbjct: 292 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 351

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
              ++ G+ + G    AF     +K+
Sbjct: 352 YTTLIGGHCKGGSFDRAFELMNKMKQ 377



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 23/202 (11%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           V   ++    + G + E   +  EM    +   V T + ++    + G    A   F   
Sbjct: 105 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVF--- 161

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
              T  G C P+   + A++   C +G++ +   L + M       DN T T ++R L  
Sbjct: 162 DGMTRAGVC-PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 220

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
             R  DV      M++MG  P+ V     + G  +   +K AF                 
Sbjct: 221 KGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAF----------------- 263

Query: 581 GHTTRSFLGH-LKPTVYKEQDL 601
            H     +G  LKP VY    L
Sbjct: 264 -HVLEEMVGRGLKPNVYTHTTL 284



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVY-RKIE--VLPAIQACNALLNGLIKKGKFDSVWE 105
           KF+   ++ LI    + GHI  AL ++ R +E    P I+A  +L++   ++ + +   +
Sbjct: 416 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 475

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           F+++ ++ GL+    TY  +I   C  G    AL +F+ M+  G
Sbjct: 476 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 231/471 (49%), Gaps = 10/471 (2%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           K +  +F+TLI  + E   +E+AL     + K    P     ++++   +K G   +   
Sbjct: 27  KLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL 86

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y++M+    V D  T+ +LID       V +A N+F +M    + P V  YTILI  L 
Sbjct: 87  MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLG 146

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              ++     +F SM   G  PNL+TY+++M  +     V+ A + + +M+   LQP+ V
Sbjct: 147 TIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+D   K G+L  A +F   + K   F N   YN L+    + G++   M L  +M
Sbjct: 207 TYNILIDAFGKTGQLERAFDF---VGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQM 263

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           +   +  +  TY ILI+ L   G++E    L  +M    I  ++VT N+++D   K G +
Sbjct: 264 KAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRV 323

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           E A  +   M  KG+  + VT++ LI+G  +AG +DAA  L  EM      P+++ +  L
Sbjct: 324 EAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTL 383

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I    K  N+    RL+ EM E  + P+V + SSLI G  K GR   A++ F E   K +
Sbjct: 384 ISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREM--KAE 441

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
           G  C PNHV Y  +I  L   G+   A +   +MR    +    T + ++R
Sbjct: 442 G--CPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVR 490



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 231/501 (46%), Gaps = 13/501 (2%)

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM-KALNLFDEMIDKGIEPTVVIY 157
           ++D V    E M       D   +  LI    G+ ++M KAL        +G  PT   Y
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIY-GEANMMEKALQTLAAFTKEGGRPTAYTY 68

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I        +     M++ M +   VP+  T+N L+D   K   V  A   + +M  
Sbjct: 69  SSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK 128

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
            N+ P+V T+ +L+  L  +G + A    F  M   G  PN+F Y+ ++     AG + E
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A  +  +M +  + PD  TYNILI      GQLE A   + K        N VTYNSL+ 
Sbjct: 189 ACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNSLLS 245

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
              ++GD++  + +  QM  KG+  N +T++ LI+    AG ++    LY EMV   +  
Sbjct: 246 SLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKY 305

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D+V    ++D LSK G ++    L+++M    +     T + LI+GL + G++  A    
Sbjct: 306 DIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
           LE  +      C+PN + Y  +I +      +  A++LF +M+   + P+  +Y++++ G
Sbjct: 366 LEMEENG----CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEG 421

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
             +A R    + L  +M   G  P+ V   +++      G   +A    E+L+E R    
Sbjct: 422 FGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM---EYLREMRDAGC 478

Query: 578 ETEGHTTRSFLGHLKPTVYKE 598
           +  G  T+S L  + P   +E
Sbjct: 479 QM-GKVTKSLLVRIPPQYMEE 498


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 223/440 (50%), Gaps = 8/440 (1%)

Query: 66  GHIEEALWVYRKIEVL----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           G ++EAL + R +       P + + NA+L GL    ++  V +  EEMV  G   +VVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           +  LI   C  G   +   +  +M+D G  P + +Y  ++ G+C E  +  A  +   M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G+ PN+  YN ++ G C      +A E   EM  ++   + VTF +L+D  C+ G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                   M + G  P++  Y  +I+G CK G + EA+ L   M      P+  +Y I++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           KGLC   +   AE L+ +M ++G   N VT+N++I+  CK+G +E+A+ +  QM   G  
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+++++S++IDG  KAG  D A+ L   MV K + P+ ++++++   LSK+G +   +++
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQM 562

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           +  + +  I       +++I  L K G    A+ F            C PN   Y  +I+
Sbjct: 563 FDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSG----CMPNESTYTILIR 618

Query: 482 ALCYDGQILKASKLFSDMRS 501
            L  +G + +A ++ +++ S
Sbjct: 619 GLASEGFVKEAQEMLTELCS 638



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 258/536 (48%), Gaps = 16/536 (2%)

Query: 44  SLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGK- 99
           S+ +P  N   +  ++ A    G I +AL V    R+    P     + +L     +G  
Sbjct: 108 SVPVPP-NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGG 166

Query: 100 --FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQG-DVMKALNLFDEMIDK-GIEPTVV 155
             F S     +++   G   DV    ++++  C QG  V +AL L  ++    G +P VV
Sbjct: 167 GGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVV 226

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  ++ GLC   +    + +   M   G  PN+ T+N L+   C+     R  +   +M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           + H   P++  +  ++DG+CK G L  A      M  +G+ PN+  YN ++ G C A   
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A  L +EM   +   D  T+NIL+   C  G +     LL++M + G + +V+TY ++
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I+G+CKEG +++A+ +   M   G  PN ++++ ++ G C A     A  L ++M+ +  
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+ V F  +I+ L K G +++ + L K+ML    +P + + S++I GL K G+   AL 
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                 +K      SPN ++Y++I  AL  +G+I +  ++F +++   +R D   Y  ++
Sbjct: 527 LLNVMVNKG----MSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVI 582

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             L +       +  LA M+  G +P+     +++RG    G +K A    E L E
Sbjct: 583 SSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEA---QEMLTE 635



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 195/398 (48%)

Query: 66  GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           G +++ +    ++   P +   N L+  L + G F+ V +   +MV  G   D+  Y  +
Sbjct: 242 GRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATV 301

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           +D  C +G +  A  + D M   G++P VV Y  ++ GLC+  +  +AE +   M +   
Sbjct: 302 LDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC 361

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
             +  T+N L+D +C+   V R +E   +ML H   P+V+T+  +++G CK G +  A  
Sbjct: 362 PLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVM 421

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
               MA  G  PN   Y  ++ G C A    +A  L S+M +   SP+  T+N +I  LC
Sbjct: 422 LLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +E A  LL++M   G   ++++Y+++IDG  K G  ++AL + + M  KG+ PN +
Sbjct: 482 KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 541

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            +SS+     K G I+  + ++  +   ++  D V++ A+I  L K G     +     M
Sbjct: 542 IYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYM 601

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           + +   P+  T + LI GL   G +  A     E   K
Sbjct: 602 VSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSK 639



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 231/494 (46%), Gaps = 12/494 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA+++G  + G+  S       +    +  +  TY  ++   C +G +  AL++ DEM  
Sbjct: 87  NAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC---GVVPNLYTYNALMDGYC-KVA 203
           +G  P   +Y +++   C+        S  R +++    G   ++   N +++  C +  
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 204 DVNRALEFYHEM-LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            V+ AL    ++       P+VV++  ++ GLC         +    M + G  PN+  +
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N LI   C+ G       + ++M     +PD+  Y  ++ G+C  G LE A  +L +M  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
            G+  NVV YN+++ G C     E+A  + ++M +     + VTF+ L+D  C+ G +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
            + L  +M+    VPDV+ +T +I+G  K+G + E + L K M      P+  + + ++ 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           GL    R  +A +   +  ++     CSPN V +  +I  LC  G + +A +L   M  +
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQG----CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              PD  +Y+T++ GL +A +  + + LL  M+  G+ P+ +I   +     + G +   
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559

Query: 563 FRCSEFLKESRIGS 576
            +  + +++  I S
Sbjct: 560 IQMFDNIQDVTIRS 573



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 196/420 (46%), Gaps = 15/420 (3%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y  ++ G C   ++  A  +  S+    V PN YTY  ++   C    +  AL    EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 217 HHNLQPNVVTFGVLMDGLCK---VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC-KA 272
                P    + V+++  C     G  R+A      +   G   ++   N +++  C + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 273 GNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           G++ EA+ L  ++   F   PDV +YN ++KGLC   +    + L+++M + G   NVVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +N+LI   C+ G  E+   V +QM + G  P++  +++++DG CK G+++ A  +   M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              L P+VV +  ++ GL      ++   L  EM +        T + L+    +NG + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             +    +  +      C P+ + Y  +I   C +G I +A  L   M +   RP+  +Y
Sbjct: 383 RVIELLEQMLEHG----CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY 438

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           T +L+GL  A+R +D   L++ MI+ G  P+ V    ++    + G ++ A    E LK+
Sbjct: 439 TIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI---ELLKQ 495



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++   + G    V E  E+M+  G V DV+TY  +I+  C +G + +A+ L   M  
Sbjct: 369 NILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G  P  + YTI++ GLC+  + V+AE +   M E G  PN  T+N +++  CK   V +
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A+E   +ML +   P+++++  ++DGL K G+   A      M   G+ PN  +Y+ +  
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
              K G +   + +   ++   I  D   YN +I  LC  G  + A   L  M   G + 
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           N  TY  LI G   EG +++A  + +++  KG
Sbjct: 609 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N ++N L KKG  +   E  ++M+L G   D+++Y  +ID     G   +AL L + M++
Sbjct: 474 NTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 533

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           KG+ P  +IY+ +   L  E ++     MF ++++  +  +   YNA++   CK    +R
Sbjct: 534 KGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDR 593

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           A+EF   M+     PN  T+ +L+ GL   G ++ A      +   G     F+
Sbjct: 594 AIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFM 647


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 192/366 (52%), Gaps = 2/366 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+ G  K G  +  ++   EM   G   DVVT+  ++   C  G++ +A+  F E ++
Sbjct: 109 NTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE 168

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
               P  V++ IL+HGLC  N++ EA  M   M E G+VP++ TYN+L+DG CK   +  
Sbjct: 169 --CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE 226

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A +    M+   ++PN+VT+  L+ G CK G    A      M + G  P++  +N LI 
Sbjct: 227 ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLIS 286

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+   + +A  +   M+K   +P++ TYN+LI GLC  G+   A  LL +M   GIL 
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +++TYNSLI  +C+   +E+A  + + M E+GV P+ +++ +L     K+   D A  L 
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M     +P++  F +L++GL     + E   L   M      P+  T   L+ GL K 
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466

Query: 448 GRISNA 453
           GR+ +A
Sbjct: 467 GRVDDA 472



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 219/452 (48%), Gaps = 11/452 (2%)

Query: 73  WVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV--VTYGVLIDC 128
           WV R  + E +     CN LL  L+K  +    ++ + + +L G   D   +TY  LI  
Sbjct: 56  WVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELL-GQHCDTNHITYNTLIGG 114

Query: 129 CCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN 188
            C  GD+ +A  L  EM ++G  P VV ++ ++  LCN   +  A   FR   EC   P+
Sbjct: 115 FCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PD 172

Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
              +N L+ G CK   ++ A +   EM    + P+VVT+  L+DGLCK   +  A     
Sbjct: 173 SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232

Query: 249 HMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVG 308
            M K  V PN+  YN LI G+CK G    A  L   M +    PDV T+N LI G C   
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           +++ A  +L  M K     N+VTYN LI G C  G   +A  + S+M  +G+ P+++T++
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           SLI   C+   I+ A  +   MV + ++PD + +  L   L K     E   L   M +A
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
              P++FT +SL+ GL  + R+  A +       +  G  C P    Y  ++  LC  G+
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLL--AVMRRVG--CDPAASTYEVLVTGLCKAGR 468

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           +  A ++   M S+ ++P   +  T++  L R
Sbjct: 469 VDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAR 500



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 137 KALNLF-DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +A  +F DE++ +  +   + Y  LI G C    M  A  +   M+E G  P++ T++++
Sbjct: 87  QAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +   C   +++RA++++ E +     P+ V F +L+ GLCK  +L  A      M++ G+
Sbjct: 147 VQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P++  YN LIDG CK+  + EA  L   M K ++ P++ TYN LI G C  G    A  
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           L+++M + G   +VVT+NSLI G+C++  ++KA  V   M +    PN+VT++ LI G C
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            AG  + A  L +EM  + ++PD++ + +LI    ++  +++  ++   M+E  + P   
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           +  +L   L K+ R   A        +  D G   PN   + ++++ LC   ++ +A  L
Sbjct: 385 SYCTLAVALLKSERFDEAFALL---DNMFDAGAI-PNLFTFNSLMEGLCCSRRLDEARHL 440

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            + MR     P   TY  ++ GL +A R+ D   +L  M+  GI P
Sbjct: 441 LAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 222/461 (48%), Gaps = 11/461 (2%)

Query: 16  CLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY 75
           CL++     L+K+R+ HH  Y +F      +    N   ++TLI  F + G +E A  + 
Sbjct: 74  CLLR----TLVKARR-HHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLL 128

Query: 76  RKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
            +++     P +   ++++  L   G      +++ E V C    D V + +L+   C  
Sbjct: 129 AEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKA 186

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
             + +A  + +EM ++GI P VV Y  LI GLC   +M EA  +  +M +  V PNL TY
Sbjct: 187 NQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTY 246

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L+ GYCK      A +    M+     P+VVTF  L+ G C+  ++  A      M K
Sbjct: 247 NTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK 306

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               PN+  YN LI G C AG   EA  L SEM+   I PD+ TYN LI   C   Q+E 
Sbjct: 307 GLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQ 366

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  +   M + G++ + ++Y +L     K    ++A ++   M + G  PN+ TF+SL++
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLME 426

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C +  +D A  L   M      P    +  L+ GL K G + +   +   M+   I P
Sbjct: 427 GLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
            V +  +++H L + G+   AL++F ++    +   C P++
Sbjct: 487 LVSSSGTIVHTLAREGKQDLALHYF-DQVVAAESKACDPSY 526



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 17/389 (4%)

Query: 186 VPNLYTYNALMDGYCKVADVNRALE-FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           + N +T N L+    K    ++A + F  E+L  +   N +T+  L+ G CK G++  A 
Sbjct: 66  IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M + G  P++  ++ ++   C  GNL  AM    E    E +PD   +NIL+ GL
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGL 183

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C   QL  A  ++++M + GI+ +VVTYNSLIDG CK   ME+A  +   M ++ V PN+
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT+++LI G CK G    A  L   M+     PDVV F +LI G  +   + +   +   
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL 303

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           M +    P++ T + LI GL   GR + A     E     DG    P+ + Y ++I   C
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE----MDGRGILPDIITYNSLIGIFC 359

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            + QI +A ++ + M    + PD  +Y T+   LL+++R  +   LL +M   G +P+  
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESR 573
               ++ G            CS  L E+R
Sbjct: 420 TFNSLMEG----------LCCSRRLDEAR 438



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 87/171 (50%), Gaps = 7/171 (4%)

Query: 405 LIDGLSKDGNMKETLRLYK-EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           L+  L K     +  ++++ E+L      +  T ++LI G  K G +  A     E  ++
Sbjct: 75  LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
              G+ SP+ V +++I+QALC  G + +A + F +  S    PD+  +  ++ GL +A +
Sbjct: 135 ---GH-SPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQ 188

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + +   ++ +M + GIVPD V    ++ G  ++  ++ A +  E + + ++
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 270/571 (47%), Gaps = 70/571 (12%)

Query: 57  TLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
           TL+  F     ++ AL +     ++  +P+   C+ +L+GL KKG+ +  +    ++   
Sbjct: 272 TLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGEL 331

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
            +V ++  Y  L++  C  G   +A  L +EM DKG+EP  V Y ILIH LC    M +A
Sbjct: 332 RMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDA 391

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
             M   MRE GV   +Y YN+L++  CK  D++ A+ F  EM+   L PN  ++  ++ G
Sbjct: 392 LCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAG 451

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
           LC+ G+L  A      MA+ GV  N + +  LI+G CKA  + EA  L ++M +  + P+
Sbjct: 452 LCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPN 511

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID---------------- 337
             T+N +I+G C VG +  A  L  +M   G+  +  TY SLI                 
Sbjct: 512 EVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVA 571

Query: 338 -------------------GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
                              G+C+EG + +A  V ++M   G + ++++F+ ++    K  
Sbjct: 572 DLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQH 631

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           + + +  L+ EM  K + PD V  T +I+  SK+GNM + L  + EM+     P+  T +
Sbjct: 632 DSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYT 691

Query: 439 SLIHGLFKNGRISNA------------------LNFFLEKTDKTDGGYCSPNHVLYA--- 477
           +L++ L K+  +S+A                   N FL+    T+G   +   + +A   
Sbjct: 692 ALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF-ATEGNLETAKDLYFAMLQ 750

Query: 478 ----------AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                      +I+  C  GQI +A  L S    +   PD  +Y+T++  L +   + + 
Sbjct: 751 GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEA 810

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           + L  +M+  G+ PD V   +++R    +G+
Sbjct: 811 IELWNEMLYKGVKPDIVAYNILIRWCNIHGE 841



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 246/523 (47%), Gaps = 39/523 (7%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P     + +L  L+K  +F      ++ M+  G++ D   Y   I   C   ++  A 
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L   M D+G + + V Y +LI+GLC   ++ EA  +  SM   GV  +  T   L+ G+
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  +++ ALE   +M      P+      ++DGL K G +  A      + +  + PNI
Sbjct: 278 CRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI 337

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN L++  CK G   EA  L +EM    + P+  TY ILI  LC  G ++ A  +L +
Sbjct: 338 FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDR 397

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M ++G+   V  YNSLI+  CK+ D++ A+   S+M E G+ PN  ++S +I G C+ G+
Sbjct: 398 MREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGD 457

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +  A+ L+ +M  K +  +   FTALI+G  K   M E  RL+ +M E+ + P+  T ++
Sbjct: 458 LSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNA 517

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I G    G I  A   +    D+      +P++  Y ++I  LC      KA +  +D+
Sbjct: 518 VIEGYCLVGDIRKAFQLY----DQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRM----------------LDVM--------------- 528
            ++    +  + T +L G  R  R+                LD++               
Sbjct: 574 ENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDS 633

Query: 529 ----MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
               +L  +M + G+ PD V +  M+  Y + G++  A  C +
Sbjct: 634 EKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 209/486 (43%), Gaps = 74/486 (15%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI +  + G +++AL +  ++    V   +   N+L+N   KK   D    F 
Sbjct: 371 NEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFL 430

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV  GL  +  +Y  +I   C +GD+  A+ L  +M +KG+      +T LI+G C  
Sbjct: 431 SEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKA 490

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            KM EA  +F  M E  + PN  T+NA+++GYC V D+ +A + Y +M+   L P+  T+
Sbjct: 491 KKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTY 550

Query: 228 -----------------------------------GVLMDGLCKVGELRAAGNFFVHMAK 252
                                                L+ G C+ G L  A + +  MA 
Sbjct: 551 RSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAM 610

Query: 253 FG-----------------------------------VFPNIFVYNCLIDGHCKAGNLFE 277
           +G                                   V P+   + C+I+ + K GN+ +
Sbjct: 611 WGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQ 670

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID 337
           A++   EM      P+  TY  L+  LC    L  AE L ++M     L N  T+N  +D
Sbjct: 671 ALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLD 730

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
            +  EG++E A  +   M + G   N+V+ ++LI G CK G I  A+ L +        P
Sbjct: 731 YFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFP 789

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           D + ++ +I  L K G++ E + L+ EML   + P +   + LI     +G     L  +
Sbjct: 790 DCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIY 849

Query: 458 LEKTDK 463
           ++   K
Sbjct: 850 IDMVKK 855



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 202/431 (46%), Gaps = 39/431 (9%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + +S +I      G +  A+ ++RK+    V        AL+NG  K  K D     +
Sbjct: 441 NAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLF 500

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY---------- 157
            +M    L  + VT+  +I+  C  GD+ KA  L+D+M+ +G+ P    Y          
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLT 560

Query: 158 -------------------------TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
                                    T L+HG C E ++ EA  ++  M   G   +L ++
Sbjct: 561 DGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISF 620

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++    K  D  ++   + EM    ++P+ V    +++   K G +  A N +  M  
Sbjct: 621 TIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIA 680

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN   Y  L++  CK+ +L  A  LC EM      P+ +T+N  +      G LE 
Sbjct: 681 DGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLET 740

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A+ L   M  +G LAN+V+ N+LI G+CK G +++A+ + S+ TE G  P+ +++S++I 
Sbjct: 741 AKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIH 799

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK G+I+ A+ L+ EM+ K + PD+V +  LI   +  G   + L +Y +M++  + P
Sbjct: 800 ELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQP 859

Query: 433 SVFTVSSLIHG 443
           +  T  +L  G
Sbjct: 860 NWHTHRALFVG 870



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 202/453 (44%), Gaps = 39/453 (8%)

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  GI P     + ++  L    +   A  +F  M   GV+ + Y Y A +  YC+V ++
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           + A      M     + + V + VL+ GLCK   +R A +    M   GV  +      L
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           + G C+   L  A+ +  +M +    P     + ++ GL   G++E A  L  ++ +  +
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG------- 378
           + N+  YN+L++  CK G   +A  + ++M++KG+EPN VT++ LI   CK G       
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 379 ----------------------------NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
                                       ++D AMG  +EMV   L P+   ++ +I GL 
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           + G++   + L+++M E  +  + +T ++LI+G  K  ++  A   F + T+        
Sbjct: 454 RKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN----LE 509

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           PN V + A+I+  C  G I KA +L+  M    L PDN TY +++ GL            
Sbjct: 510 PNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEF 569

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +AD+     V +      ++ G+   G L  A+
Sbjct: 570 VADLENNCSVLNKFSLTALLHGFCREGRLTEAY 602



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 4/381 (1%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G+ P+ +T + ++    K+     A   +  MLH  +  +   +   +   C+V  L  A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
                 M   G   +   YN LI G CK   + EA+ + + M    ++ D  T   L+ G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
            C   +L+ A  +   M + G + +    + ++DG  K+G +E+A  +  Q+ E  + PN
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
           +  +++L++  CK G    A  L  EM  K L P+ V +  LI  L K G M + L +  
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M E  +  +V+  +SLI+   K   +  A+ F  E  +       +PN   Y+ +I  L
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIG----LTPNAASYSPVIAGL 452

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G +  A +L   M    +  +  T+T ++ G  +AK+M +   L   M +  + P+ 
Sbjct: 453 CRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNE 512

Query: 544 VINQVMVRGYQENGDLKSAFR 564
           V    ++ GY   GD++ AF+
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQ 533


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 229/469 (48%), Gaps = 19/469 (4%)

Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
           Y  M   G   +   V TY +LI CCC  G +         ++ KG     + +T L+ G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN--- 219
           LC + +  +A + + R M E G +P++++YN L+ G C       ALE  H M       
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 220 LQPNVVTFGVLMDGLCKVG--------ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             P+VV++  +++G  K G         +  A      M K GV P+   YN ++ G+C 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
           +G   EA+    +M    + P+V TY+ L+  LC  G+   A  +   M K G+  ++ T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y +L+ G+CKEG + ++  +   M   GV+P+++T+++LIDG C AG +D A  L   MV
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
              + PD+V +  LI+G  +   M + L L+KEM+ + ++P++ T + ++ GLF   R +
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 436

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   ++  T        S     Y  I+  LC +    +A ++F ++   +L+ +  T+
Sbjct: 437 AAKELYVSITKSGTQLELST----YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             M+  LL+  RM +   L A     G+VPD     +M     E G L+
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 541



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 206/423 (48%), Gaps = 16/423 (3%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKG----- 98
           P VFS   L+    +    +EAL +       R     P + + N +LNG  K+G     
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220

Query: 99  ---KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
                D   E    MV  G++ D +TY  ++   C  G   +A+    +M   G+EP VV
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y+ L++ LC   +  EA  +F SM + G+ P++ TY  L+ G+CK   V  + + +  M
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM 340

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           +   ++P+++T+  L+DG C  G++  A      M   GV P+I  Y  LI+G+C+   +
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 400

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +A++L  EM    +SP++ TYNI+++GL    +   A+ L   + K G    + TYN +
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 460

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           + G CK    ++AL +   +    ++    TF+ +I    K G +D A  L+       L
Sbjct: 461 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 520

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VPDV  ++ + + L + G+++E   L+  M E   +     ++S++  L + G I+ A  
Sbjct: 521 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGT 580

Query: 456 FFL 458
           +  
Sbjct: 581 YLF 583



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 197/423 (46%), Gaps = 15/423 (3%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQG---- 133
           +P + + N LL GL  + +     E    M      G   DVV+Y  +++    +G    
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTK 219

Query: 134 ----DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
                + KA+ + + M+  G+ P  + Y  ++HG C+  +  EA    + MR  GV PN+
Sbjct: 220 LTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 279

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            TY++LM+  CK      A + +  M    L+P++ T+  L+ G CK G +  +   F  
Sbjct: 280 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339

Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
           M + GV P+I  YN LIDG C AG + EA  L + M    + PD+ TY  LI G C V +
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
           ++ A  L ++M   G+  N++TYN ++ G         A  +   +T+ G +  + T++ 
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           ++ G CK    D A+ ++  + +  L  +   F  +I  L K G M E   L+       
Sbjct: 460 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 519

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
           + P V T S +   L + G +    + FL   +      CS +  +  +I++ L   G I
Sbjct: 520 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG----CSADSRMLNSIVRKLLQRGDI 575

Query: 490 LKA 492
            +A
Sbjct: 576 TRA 578



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 197/442 (44%), Gaps = 20/442 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG---VVPNLYTYNA 194
           A ++FDE++ +G   ++      +  +   +    A S +  M   G   V P ++TY  
Sbjct: 39  ARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYAI 97

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKF 253
           L+   C+   ++        ++    + + +TF  L+ GLC       A +  +  M + 
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE---ISPDVFTYNILIKGLCGVG-- 308
           G  P++F YN L+ G C      EA+ L   M         PDV +YN ++ G    G  
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQ 217

Query: 309 ------QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
                  ++ A  +L  M K G++ + +TYNS++ GYC  G  ++A+    +M   GVEP
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 277

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           NVVT+SSL++  CK G    A  ++  M  + L PD+  +  L+ G  K+G + E+ +L+
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
             M+   + P + T ++LI G    G++  A                 P+ V Y  +I  
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG----VKPDIVTYGTLING 393

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
            C   ++  A  LF +M S  + P+  TY  +L+GL   +R      L   + K G   +
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453

Query: 543 AVINQVMVRGYQENGDLKSAFR 564
                +++ G  +N     A R
Sbjct: 454 LSTYNIILHGLCKNNLTDEALR 475



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +++++  +   G  +EA+   +K+    V P +   ++L+N L K G+     + ++ M
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  D+ TY  L+   C +G V+++  LFD M+  G++P ++ Y  LI G C   KM
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +  SM   GV P++ TY  L++GYC+V+ ++ AL  + EM+   + PN++T+ ++
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GL       AA   +V + K G    +  YN ++ G CK     EA+ +   +   ++
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 485

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             +  T+NI+I  L   G+++ A+ L       G++ +V TY+ + +   ++G +E+   
Sbjct: 486 QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 545

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +   M E G   +    +S++    + G+I  A G Y  M+
Sbjct: 546 LFLSMEENGCSADSRMLNSIVRKLLQRGDITRA-GTYLFMI 585



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 38/288 (13%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + + TL+    + G + E+  ++    +I V P I   N L++G    GK D   +    
Sbjct: 315 ATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 374

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI-------- 161
           MV  G+  D+VTYG LI+  C    +  AL LF EM+  G+ P ++ Y I++        
Sbjct: 375 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 434

Query: 162 ---------------------------HGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
                                      HGLC  N   EA  MF+++    +     T+N 
Sbjct: 435 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 494

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++    K   ++ A + +     + L P+V T+ ++ + L + G L    + F+ M + G
Sbjct: 495 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
              +  + N ++    + G++  A +    +++   S +  T + L++
Sbjct: 555 CSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 602


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 231/501 (46%), Gaps = 38/501 (7%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            F     A   +G   +AL + R +     +P       +++ L+ +G         +EM
Sbjct: 182 TFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM 241

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN---- 166
           +L G  ADV T+  ++   CG G V +A  L D M+  G  P+VV Y  L+ GLC     
Sbjct: 242 LLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301

Query: 167 ---------------------------ENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
                                      E K+  A  ++  M   G  P+++TYN LM G 
Sbjct: 302 DEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+     A+    EM      PN+VT+  L+   C+ G    A      M+  G   N 
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             YN +I    K G L EAM L  EM+     PD+ TYN +I  LC   Q++ AE +   
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + +EG++AN +TYN+LI      G  ++ L + ++M   G   +VV+++ LI   CK GN
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D +M L  EM+ K + P+   +  LI+ L K G +++ L L KEML   +TP + T ++
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 601

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+GL K G    ALN  LEK    +     P+ V Y  +I   C    +  AS L    
Sbjct: 602 LINGLCKVGWTHAALN-LLEKLPNEN---VHPDIVTYNILISWHCKVRLLDDASMLLDKA 657

Query: 500 RSDNLRPDNCTYTTMLRGLLR 520
            S  + P+  T+  M++  +R
Sbjct: 658 VSGGIVPNERTWGMMVQNFVR 678



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 234/501 (46%), Gaps = 12/501 (2%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R+  V P+ ++ NA+L+ L +          Y  M+   +     T+GV     C  G  
Sbjct: 137 RRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 196

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
             AL L   M   G  P  V+Y  +IH L  +  + EA ++   M   G   ++ T+N +
Sbjct: 197 RDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDV 256

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           + G C +  V  A      M+ H   P+VVT+G L+ GLC+    R A   +   A  G 
Sbjct: 257 VLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT---RQADEAY---AMLGR 310

Query: 256 FP--NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
            P  N+ + N +I G    G L  A  L   M      PDV TYNIL+ GLC +G+   A
Sbjct: 311 VPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSA 370

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             +L +M ++G   N+VTY++L+  +C+ G  + A ++  QM+ KG   N   ++ +I  
Sbjct: 371 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYA 430

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
             K G +D AM L  EM  +   PD+  +  +I  L  +  M E   ++  +LE  +  +
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T ++LIH L  +GR    L    E         C  + V Y  +I+ALC +G + ++ 
Sbjct: 491 GITYNTLIHALLHSGRWQEGLRLANEMVLHG----CPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            L  +M +  ++P+N +Y  ++  L +A ++ D + L  +M+  G+ PD V    ++ G 
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606

Query: 554 QENGDLKSAFRCSEFLKESRI 574
            + G   +A    E L    +
Sbjct: 607 CKVGWTHAALNLLEKLPNENV 627



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 5/313 (1%)

Query: 35  CYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLP---AIQACNA 89
           C S    L+ +E     P++  +STL+ +F   G  ++A  +  ++         Q  N 
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++  L K GK D      +EM   G   D+ TY  +I   C    + +A ++F  ++++G
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           +    + Y  LIH L +  +  E   +   M   G   ++ +YN L+   CK  +V+R++
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
               EM+   ++PN  ++ +L++ LCK G++R A      M   G+ P+I  YN LI+G 
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           CK G    A++L  ++    + PD+ TYNILI   C V  L+ A  LL K    GI+ N 
Sbjct: 607 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE 666

Query: 330 VTYNSLIDGYCKE 342
            T+  ++  + ++
Sbjct: 667 RTWGMMVQNFVRQ 679


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 169/607 (27%), Positives = 262/607 (43%), Gaps = 97/607 (15%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N + F+ L+ A  E G  + A  + RK++     P     N LLN   KKG++ +  E  
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELI 237

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           + M   G+ ADV TY VLID  C +    K   +   M    + P  + Y  LI+GL  E
Sbjct: 238 DAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKE 297

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+  A  +F  M  C ++PN  TYN L+ G+C   ++  AL     M+ H L+PN VT+
Sbjct: 298 GKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTY 357

Query: 228 GVLM-----------------------------------DGLCKVGELRAAGNFFVHMAK 252
           G L+                                   DGLCK G L  A      M K
Sbjct: 358 GALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLK 417

Query: 253 FGVFPNIFVYNCLIDG-------------------HCKAGNLFEAMSLCSEMEKFEISPD 293
             V P+I  ++ L++G                   +CK GNL EA++  + M +     D
Sbjct: 418 VSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSD 477

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
            FT ++L+   C  G+LE AE  +  M + G+  + VT++ +ID Y   GD  KA SV  
Sbjct: 478 HFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFD 537

Query: 354 QMTEKGVEPNVVT-----------------------------------FSSLIDGQCKAG 378
           +M   G  P+  T                                   +++++    ++G
Sbjct: 538 KMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSG 597

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFTV 437
           N+  A+ L  EMV+ + VPD   +T+LI GL + G M   L L    +E   ++P+    
Sbjct: 598 NLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMY 657

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           +SL+ GL K G    AL  F    D  + G   P+ + +  ++      G++ K + + S
Sbjct: 658 TSLVDGLLKEGHSKAALYMF---EDMLNEG-VQPDAIAFNVLLDRYSRKGKMSKVNDILS 713

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            MRS +L  +  TY  +L G  +   M     L  +MI  G  PD +    ++ GY ++G
Sbjct: 714 TMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSG 773

Query: 558 DLKSAFR 564
            L  A +
Sbjct: 774 SLDVAVK 780



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 270/610 (44%), Gaps = 67/610 (10%)

Query: 37  SVFNALNSLEIPKF---NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNAL 90
           +VF AL  +E   F   NP+VF  LI        + +A+  +R +      P++  CN +
Sbjct: 93  NVFGAL--METYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMV 150

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           L  L+K  + D  W F++EM+   +  +V T+ +L++  C +G    A  L  +M + G 
Sbjct: 151 LGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGH 210

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            PT V Y  L++  C + +   A  +  +M   G+  ++ TYN L+D  C+ +   +   
Sbjct: 211 FPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYL 270

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
               M  + + PN +T+  L++GL K G++  A   F  M+   + PN   YN LI GHC
Sbjct: 271 ILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHC 330

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             GN+ EA+ LC  M    + P+  TY  L+ G+    Q      +L++M  +G+    +
Sbjct: 331 SNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHI 390

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           +Y ++IDG CK G +E+A+ +   M +  V P++VTFS L++G  K G            
Sbjct: 391 SYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTG------------ 438

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               LVP+ V+ + LI    K GN+KE L  Y  M ++      FT S L+    + GR+
Sbjct: 439 ----LVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRL 494

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A  +F++   +      +P+ V +  II      G  LKA  +F  M S    P   T
Sbjct: 495 EEA-EYFVDHMSRMG---LAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFT 550

Query: 511 -----------------------------------YTTMLRGLLRAKRMLDVMMLLADMI 535
                                              Y TML    R+  + + + LL +M+
Sbjct: 551 YEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMV 610

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTT--RSFL--GHL 591
               VPD+     ++ G    G +  A   S    E  + S     +T+     L  GH 
Sbjct: 611 MNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHS 670

Query: 592 KPTVYKEQDL 601
           K  +Y  +D+
Sbjct: 671 KAALYMFEDM 680



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 236/489 (48%), Gaps = 11/489 (2%)

Query: 36   YSVFNALNSL-EIPKFNPSVFSTLIIAFSEMGHIEEA-LWVYRKIEVLPAIQAC--NALL 91
            +SVF+ +NSL  +P  +   +  L+      GHI EA ++++R   +  AI +   N +L
Sbjct: 533  FSVFDKMNSLGHLP--SQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTML 590

Query: 92   NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI- 150
                + G   +     +EMV+   V D  TY  LI   C +G ++ AL L    I+KG+ 
Sbjct: 591  TLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLL 650

Query: 151  EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
             P   +YT L+ GL  E     A  MF  M   GV P+   +N L+D Y +   +++  +
Sbjct: 651  SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVND 710

Query: 211  FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
                M   +L  N+ T+ +L+ G  K   +      +  M   G  P+   ++ LI G+C
Sbjct: 711  ILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC 770

Query: 271  KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
            K+G+L  A+    ++       D FT N+L+  LC   +++ A  L++++   G+  NV 
Sbjct: 771  KSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVD 830

Query: 331  TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            TYNSL +G+ +    ++A  +   + E G  P    F++LI G C+ GN+  AM L  EM
Sbjct: 831  TYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 890

Query: 391  VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             I  +    V  +A+I GL++     E  R+   MLE +I P+V T ++L+H   K G +
Sbjct: 891  KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNV 950

Query: 451  SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            + A    LE     +  +   +   Y  +I  LC DG I  A KL+ +M   ++ P+   
Sbjct: 951  AKA----LELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSI 1006

Query: 511  YTTMLRGLL 519
            Y  ++   L
Sbjct: 1007 YIVLIDSFL 1015



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 256/562 (45%), Gaps = 19/562 (3%)

Query: 23  ENLLK-SRKPHHVCYSVF--NALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           +++LK S  P  V +SV     L +  +P  N  + STLI  + +MG+++EAL  Y  + 
Sbjct: 413 DDMLKVSVSPDIVTFSVLVNGFLKTGLVP--NRVLHSTLIYNYCKMGNLKEALNAYAVMN 470

Query: 80  VLPAIQ---ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
               +      + L+    + G+ +    F + M   GL    VT+  +ID     GD +
Sbjct: 471 QSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDAL 530

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           KA ++FD+M   G  P+   Y  L+ GL     + EA+                 YN ++
Sbjct: 531 KAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTML 590

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
               +  +++ A+    EM+ +N  P+  T+  L+ GLC+ G++  A        + G+ 
Sbjct: 591 TLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLL 650

Query: 257 -PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN  +Y  L+DG  K G+   A+ +  +M    + PD   +N+L+      G++     
Sbjct: 651 SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVND 710

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +L  M    +  N+ TYN L+ GY K   M +   + ++M   G  P+ +T+ SLI G C
Sbjct: 711 ILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC 770

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K+G++D A+    ++ ++    D      L+  L +   +K    L K++    +TP+V 
Sbjct: 771 KSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVD 830

Query: 436 TVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T +SL +G  +      A   L+  LE       GY +P    +  +I+ +C  G +  A
Sbjct: 831 TYNSLFNGFVRTCSFDEARCILHALLE------NGY-APTCKQFTTLIRGMCRMGNVKGA 883

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            +L  +M+   +       + ++RGL R+++  +   +L  M++M I+P       ++  
Sbjct: 884 MELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHT 943

Query: 553 YQENGDLKSAFRCSEFLKESRI 574
           Y + G++  A      +++  +
Sbjct: 944 YCKEGNVAKALELRSVMEQCHV 965



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 6/413 (1%)

Query: 42   LNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVY-RKIE---VLPAIQACNALLNGLI 95
            L+ + +  F P  F+  +LI      G +  AL +  R IE   + P      +L++GL+
Sbjct: 606  LDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLL 665

Query: 96   KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
            K+G   +    +E+M+  G+  D + + VL+D    +G + K  ++   M  + +   + 
Sbjct: 666  KEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLA 725

Query: 156  IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
             Y IL+HG    + M     ++  M   G  P+  T+++L+ GYCK   ++ A++F  ++
Sbjct: 726  TYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKI 785

Query: 216  LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
                 + +  T  VL+  LC+  E++ A +    +   GV PN+  YN L +G  +  + 
Sbjct: 786  TVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSF 845

Query: 276  FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             EA  +   + +   +P    +  LI+G+C +G ++GA  L  +M   G+ +  V  +++
Sbjct: 846  DEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAI 905

Query: 336  IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
            I G  +    ++A  +   M E  + P V TF++L+   CK GN+  A+ L + M    +
Sbjct: 906  IRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHV 965

Query: 396  VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
              DV  +  LI GL  DG+++   +LY+EM +  I P+      LI      G
Sbjct: 966  KLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTG 1018



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 56   STLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
            S +I   +     +EA   L +  +++++P +     L++   K+G      E    M  
Sbjct: 903  SAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQ 962

Query: 113  CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG-LCNENKMV 171
            C +  DV  Y VLI   C  GD+  A  L++EM  + I P   IY +LI   LC  N +V
Sbjct: 963  CHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIV 1022

Query: 172  EAESMFRSMR 181
            E+E + R +R
Sbjct: 1023 ESEKLLRDLR 1032


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 221/452 (48%), Gaps = 16/452 (3%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           P FN       + +F+ M H+             P+      LL  + K   + +V    
Sbjct: 88  PHFN--TLDDALSSFNRMLHMHPP----------PSTVDFTKLLTSIAKMKHYSTVLSLS 135

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +M   G+  DV T  +LI+  C    +  A ++  +++  G +P    +  LI GLC E
Sbjct: 136 TQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVE 195

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA  +F      G  P++ TY  LM+G CKV + + A+     M+  N +PNV+ +
Sbjct: 196 GKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 255

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             ++D LCK  ++  A N F  M   G+ P+IF YN LI   C         +L +EM  
Sbjct: 256 NTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 315

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            +I P+V  ++ ++  LC  G +  A  ++  M K G+  +VVTY +L+DG+C   +M++
Sbjct: 316 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE 375

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ V   M  KG  PNV +++ LI+G C+   +D AMGL  +M ++ L+ D V +  LI 
Sbjct: 376 AVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIH 435

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           GL   G ++  + L+ EM+ +   P + T   L+  L KN  ++ A+          +G 
Sbjct: 436 GLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL----KAIEGS 491

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
               + ++Y   I  +C  G++  A  LFS++
Sbjct: 492 NLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 211/401 (52%), Gaps = 8/401 (1%)

Query: 30  KPHHVCYSVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL---PAI 84
           K +    S+   ++S  IP   P V++   LI +F  +  +  A  V  K+  L   P  
Sbjct: 126 KHYSTVLSLSTQMDSFGIP---PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDN 182

Query: 85  QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
              N L+ GL  +GK       +++ +  G   DVVTYG L++  C  G+   A+ L   
Sbjct: 183 TTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS 242

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ K   P V+ Y  +I  LC + ++ EA ++F  M   G+ P+++TYN+L+   C + +
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
                   +EM++  + PNVV F  ++D LCK G +  A +    M K GV P++  Y  
Sbjct: 303 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+DGHC    + EA+ +   M      P+V +YNILI G C + +++ A GLL++M  +G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           ++A+ VTYN+LI G C  G ++ A+++  +M   G  P++VT+  L+D  CK  ++  AM
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            L   +   +L  D++V+   IDG+ + G ++    L+  +
Sbjct: 483 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 209/425 (49%), Gaps = 4/425 (0%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL+ F+ M+     P+ V +T L+  +          S+   M   G+ P++YT N L++
Sbjct: 96  ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 155

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  +  A     ++L    QP+  TF  L+ GLC  G++  A + F      G  P
Sbjct: 156 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 215

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           ++  Y  L++G CK GN   A+ L   M +    P+V  YN +I  LC   Q+  A  L 
Sbjct: 216 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 275

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M  +GI  ++ TYNSLI   C   + +   ++ ++M    + PNVV FS+++D  CK 
Sbjct: 276 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 335

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G I  A  +   M+ + + PDVV +TAL+DG      M E ++++  M+     P+V + 
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI+G  +  R+  A+    + + +   G  + + V Y  +I  LC+ G++  A  LF 
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQ---GLIA-DTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +M +    PD  TY  +L  L +   + + M+LL  +    +  D ++  + + G    G
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 558 DLKSA 562
           +L++A
Sbjct: 512 ELEAA 516



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 183/396 (46%), Gaps = 4/396 (1%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           N + +A S F  M      P+   +  L+    K+   +  L    +M    + P+V T 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            +L++  C +  L  A +    + K G  P+   +N LI G C  G + EA+ L  +   
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
               PDV TY  L+ GLC VG    A  LL+ M ++    NV+ YN++ID  CK+  + +
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A ++ S+M  KG+ P++ T++SLI   C          L  EMV   ++P+VVVF+ ++D
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+G +     +   M++  + P V T ++L+ G      +  A+  F     K    
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG--- 387

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C PN   Y  +I   C   ++ KA  L   M    L  D  TY T++ GL    R+   
Sbjct: 388 -CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 446

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + L  +M+  G +PD V  ++++    +N  L  A 
Sbjct: 447 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 5/315 (1%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P V  + TL+    ++G+   A+ + R +      P + A N +++ L K  +    +
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
             + EM+  G+  D+ TY  LI   C   +      L +EM++  I P VV+++ ++  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C E  +  A  +   M + GV P++ TY ALMDG+C  ++++ A++ +  M+H    PNV
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            ++ +L++G C++  +  A      M+  G+  +   YN LI G C  G L  A++L  E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M      PD+ TY IL+  LC    L  A  LL+ +    + A+++ YN  IDG C+ G+
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 345 MEKALSVCSQMTEKG 359
           +E A  + S ++ +G
Sbjct: 513 LEAARDLFSNLSCQG 527



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 149/280 (53%), Gaps = 3/280 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I +  +   + EA  ++ ++    + P I   N+L++ L    ++  V    
Sbjct: 251 NVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 310

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EMV   ++ +VV +  ++D  C +G +  A ++ D MI +G+EP VV YT L+ G C  
Sbjct: 311 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 370

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           ++M EA  +F +M   G VPN+ +YN L++GYC++  +++A+    +M    L  + VT+
Sbjct: 371 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 430

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             L+ GLC VG L+ A   F  M   G  P++  Y  L+D  CK  +L EAM L   +E 
Sbjct: 431 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 490

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             +  D+  YNI I G+C  G+LE A  L   +  +G  A
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score = 45.4 bits (106), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 4/150 (2%)

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + + L  +  ML     PS    + L+  + K    S  L+     + + D     P+  
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSL----STQMDSFGIPPDVY 148

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
               +I + C+  ++  A  + + +     +PDN T+ T++RGL    ++ + + L    
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           I  G  PD V    ++ G  + G+  +A R
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 238


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 222/463 (47%), Gaps = 4/463 (0%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++ GL  +G+ +      E     G V   V Y VLID  C +GDV + L L  EM  KG
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I PTVV Y  +IH L  ++ + + ES+   M+E G+ PN+  YN ++   CK    ++AL
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
              ++M+     P+VVTF  L+   C+ G++  A        +  + PN   Y  LI G 
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
           C  G +  A  L  EM     +PDV T   LI GL   GQ++ A  + +KM +  ++ + 
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
             YN LI G CK+  +  A ++  +M E+ V+P+   +++LIDG  ++  +  A  ++  
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
           M  K    D+V + A+I G  K G M E +     M +    P  FT ++LI G  K G 
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
           I  AL F  +   +     C PN V YA++I   C  G    A  LF+ M+S+ L P+  
Sbjct: 642 IKAALRFLCDMMKRR----CKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
            YT ++  L +  + +        M+     P+      +V G
Sbjct: 698 HYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNG 740



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 238/497 (47%), Gaps = 24/497 (4%)

Query: 42  LNSLEIPKFNPSVFS-TLIIAF----SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIK 96
           L  +E+    P+V +   II +    S++  IE  LW  ++  + P +Q  N ++  L K
Sbjct: 334 LGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK 393

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
                       +MV      DVVT+  LI   C +GDV +AL L  E I + +EP  + 
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT LIHG C   +++ A  +   M   G  P++ T  AL+ G      V+ AL    +M 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P+   + VL+ GLCK   L AA N  V M +  V P+ FVY  LIDG  ++  L 
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           +A  +   ME+     D+  YN +IKG C  G +  A   +  M K G + +  TY +LI
Sbjct: 574 DARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLI 633

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           DGY K+GD++ AL     M ++  +PN+VT++SLI G C  GN D+A  L+  M  + L 
Sbjct: 634 DGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLF 693

Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
           P+VV +T LI  L K     +    ++ ML    +P+  T+  L++GL  N R    +N 
Sbjct: 694 PNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL-TNCRY-GMINS 751

Query: 457 FLEKTDK---------------TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
               TD+               +DG    P    Y AII +LC    + KA +L   M +
Sbjct: 752 NCSDTDQAHKKSALLDVFKGLISDG--LDPRISAYNAIIFSLCRHNMLGKAMELKEKMSN 809

Query: 502 DNLRPDNCTYTTMLRGL 518
               PD  T+ ++L G 
Sbjct: 810 KGCLPDPVTFLSLLYGF 826



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYT--ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           A  L+ EM+ +  E     Y+  +++ GLC E ++ E   +  +    G VP    YN L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           +DGYC+  DV R L    EM    + P VVT+G ++  L +  +L    +    M + G+
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PN+ +YN +I   CK  +  +A+++ ++M      PDV T+N LI   C  G +E A  
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL++  +  +  N ++Y  LI G+C  G++  A  +  +M  +G  P+VVT  +LI G  
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
            +G +D A+ +  +M  + ++PD  ++  LI GL K   +     L  EMLE K+ P  F
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
             ++LI G  ++ ++S+A   F    +K  GGY   + V Y A+I+  C  G + +A   
Sbjct: 558 VYTTLIDGFIRSDKLSDARKIFEFMEEK--GGY--RDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S MR     PD  TYTT++ G  +   +   +  L DM+K    P+ V    ++ GY  
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCN 673

Query: 556 NGDLKSA 562
            G+  SA
Sbjct: 674 IGNTDSA 680



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 223/431 (51%), Gaps = 4/431 (0%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L++G  ++G          EM + G++  VVTYG +I     + D+ K  +L  EM +
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           +G+ P V IY  +I+ LC      +A ++   M      P++ T+N L+  +C+  DV  
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL+   E +   L+PN +++  L+ G C  GE+  A +  V M   G  P++     LI 
Sbjct: 435 ALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIH 494

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G   +G + EA+ +  +M + ++ PD   YN+LI GLC    L  A+ LL +M ++ +  
Sbjct: 495 GLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +   Y +LIDG+ +   +  A  +   M EKG   ++V ++++I G CK+G ++ A+   
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
           + M     +PD   +T LIDG +K G++K  LR   +M++ +  P++ T +SLI G    
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNI 674

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G   +A   F   + +++G +  PN V Y  +I +L    + ++A+  F  M  ++  P+
Sbjct: 675 GNTDSAEVLF--ASMQSEGLF--PNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPN 730

Query: 508 NCTYTTMLRGL 518
           + T   ++ GL
Sbjct: 731 DATMHYLVNGL 741



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 183/389 (47%), Gaps = 6/389 (1%)

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           M    RE G   + Y+   ++ G C    V                P  V + VL+DG C
Sbjct: 265 MLARDREGGA--DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYC 322

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G++         M   G+ P +  Y  +I    +  +L +  SL  EM++  +SP+V 
Sbjct: 323 RRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQ 382

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
            YN +I  LC       A  +L +M       +VVT+N+LI  +C+EGD+E+AL +  + 
Sbjct: 383 IYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREA 442

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             + +EPN ++++ LI G C  G +  A  L  EM+ +   PDVV   ALI GL   G +
Sbjct: 443 IRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQV 502

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            E L + ++M E ++ P     + LI GL K   +S A N  +E  ++       P+  +
Sbjct: 503 DEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQK----VQPDKFV 558

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I       ++  A K+F  M       D   Y  M++G  ++  M + +M ++ M 
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           K+G +PD      ++ GY + GD+K+A R
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALR 647



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 6/366 (1%)

Query: 208 ALEFYHEMLHHNLQPNVVTFG--VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           A   Y EML  + +     +   V++ GLC  G +             G  P    YN L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           IDG+C+ G++   + L  EME   I P V TY  +I  L     L   E LL +M + G+
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NV  YN++I   CK     +AL+V +QM     +P+VVTF++LI   C+ G+++ A+ 
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L  E + + L P+ + +T LI G    G +     L  EM+    TP V T+ +LIHGL 
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            +G++  AL    +  ++       P+  +Y  +I  LC    +  A  L  +M    ++
Sbjct: 498 VSGQVDEALMVREKMAERQ----VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD   YTT++ G +R+ ++ D   +   M + G   D V    M++GY ++G +  A  C
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 566 SEFLKE 571
              +++
Sbjct: 614 MSSMRK 619



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 172/445 (38%), Gaps = 128/445 (28%)

Query: 35  CYSVFNAL---NSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI----------- 78
           C S   AL   N +   +F+P V  F+TLI AF   G +EEAL + R+            
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453

Query: 79  ------------EVL---------------PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
                       EV+               P +    AL++GL+  G+ D      E+M 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              ++ D   Y VLI   C +  +  A NL  EM+++ ++P   +YT LI G    +K+ 
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 172 EAESMFR-----------------------------------SMRECGVVPNLYTYNALM 196
           +A  +F                                    SMR+ G +P+ +TY  L+
Sbjct: 574 DARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLI 633

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
           DGY K  D+  AL F  +M+    +PN+VT+  L+ G C +G   +A   F  M   G+F
Sbjct: 634 DGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLF 693

Query: 257 PNIFVYNCLI------DGHCKAGNLFEAMSL----------------------------C 282
           PN+  Y  LI      D   +A   FE M L                            C
Sbjct: 694 PNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNC 753

Query: 283 SEMEKFE----------------ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           S+ ++                  + P +  YN +I  LC    L  A  L +KM  +G L
Sbjct: 754 SDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCL 813

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSV 351
            + VT+ SL+ G+   G   K  S 
Sbjct: 814 PDPVTFLSLLYGFSSVGKSGKWRSA 838



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 18/304 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEFYEEM 110
           V++TLI  F     + +A  ++  +E       I A NA++ G  K G  +        M
Sbjct: 558 VYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSM 617

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G + D  TY  LID    +GD+  AL    +M+ +  +P +V Y  LI G CN    
Sbjct: 618 RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNT 677

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             AE +F SM+  G+ PN+  Y  L+    K     +A  ++  ML ++  PN  T   L
Sbjct: 678 DSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYL 737

Query: 231 MDGL--CKVGELR-------------AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           ++GL  C+ G +              A  + F  +   G+ P I  YN +I   C+   L
Sbjct: 738 VNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNML 797

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
            +AM L  +M      PD  T+  L+ G   VG+       L   +++     +  Y +L
Sbjct: 798 GKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEFEIICKYMTL 857

Query: 336 IDGY 339
           ++ +
Sbjct: 858 LNQH 861



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 4/240 (1%)

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           ++ G C EG +E+   +      +G  P  V ++ LIDG C+ G++   + L  EM +K 
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           ++P VV + A+I  L +  ++ +   L  EM E  ++P+V   +++I+ L K    S AL
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                  ++       P+ V +  +I A C +G + +A KL  +     L P+  +YT +
Sbjct: 402 AVL----NQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPL 457

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + G      ++    LL +MI  G  PD V    ++ G   +G +  A    E + E ++
Sbjct: 458 IHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 239/463 (51%), Gaps = 6/463 (1%)

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           LN   K  K+D    F + MV  G   DV+    LI        + KA+ +  E+++K  
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHG 142

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
           +P V  Y  +I G C  +++  A  +   M++ G  P++ TYN L+  +C    ++ AL 
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
              ++L  N +P V+T+ +L++     G +  A      M   G+ P+ + YN +++G C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G L  A    S + K      V TYNIL++ L   G+ E  E L+  M  +G   N +
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           TY++LI   C++G +++A +V   M EK + P+  ++  LI   C+ G +D A+    +M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           +    +PD++ + +++  L K+GN  E L +++++ E    P+  + ++L   L+ +G  
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNC 509
             AL   LE    ++G    P+ + Y ++I  LC DG + +A +L  DM  S+  +P   
Sbjct: 443 IRALGMILEML--SNG--IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVI 498

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +Y T+L GL + +R++D + +LA M+  G +P+     ++++G
Sbjct: 499 SYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 231/451 (51%), Gaps = 9/451 (1%)

Query: 50  FNPSVF--STLIIAFSEMGHIEEALWVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWE 105
           + P V   + LI  F  M  IE+A+ V   +E    P + A NA+++G  K  + D   +
Sbjct: 108 YKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASK 167

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + M   G   DVVTY +LI   CG+G +  AL + D+++    +PTV+ YTILI    
Sbjct: 168 VLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATI 227

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            +  + EA  +   M   G+ P+ YTYN +++G CK   ++RA EF   +  +     V 
Sbjct: 228 TQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+ +L+  L   G+          M   G  PN   Y+ LI   C+ G + EA ++   M
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVM 347

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           ++  ++PD ++Y+ LI  LC  G+++ A   L  M   G L ++++YNS++   CK G+ 
Sbjct: 348 KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNA 407

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL++  ++ E G  PN  ++++L      +G+   A+G+  EM+   + PD + + +L
Sbjct: 408 DEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSL 467

Query: 406 IDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           I  L +DG + + + L  +M E+ K  P+V + ++++ GL K  RI +A+       ++ 
Sbjct: 468 ISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEG 527

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
               C PN   Y  +IQ + + G    A +L
Sbjct: 528 ----CLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 5/359 (1%)

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK A  + +L F   M++   +P+V+    L+ G   + ++  A      + K G  P++
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDV 146

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           F YN +I G CKA  +  A  +   M+K    PDV TYNILI   CG G+L+ A  ++ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           + K+     V+TY  LI+    +G +++A+ +  +M  +G+ P+  T++ +++G CK G 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A    + +     V  V  +  L+  L  +G  +   +L  +ML     P+  T S+
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI  L ++G+I  A N      +K      +P+   Y  +I ALC +G++  A +   DM
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKA----LAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
            S    PD  +Y ++L  L +     + + +   + ++G  P+A     +      +GD
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGD 441



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 5/337 (1%)

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  +   +  F  HM   G  P++ +   LI G      + +A+ +   +EK    PDV
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           F YN +I G C   +++ A  +L +M K G   +VVTYN LI  +C  G ++ AL V  Q
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           + +   +P V+T++ LI+     G ID AM L  EM+ + L PD   +  +++G+ K+G 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +         + +      V T + L+  L   G+         +   K     C PN +
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG----CEPNPI 322

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y+ +I ALC DG+I +A  +   M+   L PD  +Y  ++  L R  ++   +  L DM
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           I  G +PD +    ++    +NG+   A    E L E
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE 419



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 5/250 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           NP  +STLI A    G I+EA   L V ++  + P   + + L++ L ++GK D   EF 
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++M+  G + D+++Y  ++   C  G+  +ALN+F+++ + G  P    Y  L   L + 
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH-HNLQPNVVT 226
              + A  M   M   G+ P+  TYN+L+   C+   V++A+E   +M      QP V++
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVIS 499

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++ GLCKV  +  A      M   G  PN   Y  LI G   AG  ++AM L + + 
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559

Query: 287 KFE-ISPDVF 295
             + IS D F
Sbjct: 560 NMDAISEDSF 569



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 40/310 (12%)

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ++  CK+    E++     M      PDV     LIKG   + ++E A  +++ + K G 
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             +V  YN++I G+CK   ++ A  V  +M ++G EP+VVT++ LI   C  G +D A+ 
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           +  +++  +  P V+ +T LI+     G + E ++L  EML   + P  +T         
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYT--------- 253

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
                                         Y  ++  +C +G + +A +  S +  +   
Sbjct: 254 ------------------------------YNVVVNGMCKEGMLDRAFEFLSRISKNGCV 283

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
               TY  +LR LL   +      L++DM+  G  P+ +    ++     +G +  A   
Sbjct: 284 AGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNV 343

Query: 566 SEFLKESRIG 575
            + +KE  + 
Sbjct: 344 LKVMKEKALA 353



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 10/213 (4%)

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             F   ++  CK+   D ++     MV +   PDV++ T LI G      +++ +++  E
Sbjct: 78  TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-E 136

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           +LE    P VF  +++I G  K  R+ +A        D+       P+ V Y  +I   C
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVL----DRMKKRGFEPDVVTYNILIGNFC 192

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             G++  A ++   +  DN +P   TYT ++   +    + + M LL +M+  G+ PD  
Sbjct: 193 GRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRY 252

Query: 545 INQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
              V+V G  + G L  AF   EFL  SRI  +
Sbjct: 253 TYNVVVNGMCKEGMLDRAF---EFL--SRISKN 280


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 213/412 (51%), Gaps = 5/412 (1%)

Query: 134 DVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           DV+   +L + ++  G IE       I++ GLC E K+ E   +       G +PN+  Y
Sbjct: 164 DVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFY 223

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N L+DGYCK  D+  A   + E+      P V T+G +++G CK G+ +A     + M  
Sbjct: 224 NTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNS 283

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G+  N+ VYN +ID   K G++ +A+     M +    PD+ TYN LI G C  G++  
Sbjct: 284 RGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSE 343

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A+ LL++   +G++ N  +Y  LI  YCK+G  ++A +   +MTE+G +P++VT+ +L+ 
Sbjct: 344 ADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVH 403

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G   AG +D A+ +  +M+ + + PD  ++  L+ GL K   +     L  EML+  + P
Sbjct: 404 GLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 463

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
             F  ++L+ G  +NG +  A   F    +K      +P  V Y A+I+  C  G +  A
Sbjct: 464 DAFVYATLVDGFIRNGNLDEARKLFELTIEKG----MNPGIVGYNAMIKGYCKFGMMKDA 519

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
               + M+  +L PD  TY+T++ G ++   +     +  +M+KM   P+ +
Sbjct: 520 MACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 190/349 (54%), Gaps = 3/349 (0%)

Query: 55  FSTLIIAFSEMGHIEEA--LWVYRKIE-VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TLI  + + G +E A  L++  K++  LP ++   A++NG  KKG F ++     EM 
Sbjct: 223 YNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 282

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             GL  +V  Y  +ID     G ++KA+   + MI+ G +P +V Y  LI G C + K+ 
Sbjct: 283 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 342

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA+ +       G++PN ++Y  L+  YCK    +RA  +  EM     +P++VT+G L+
Sbjct: 343 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 402

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            GL   GE+  A      M + GVFP+  +YN L+ G CK   L  A  L +EM    + 
Sbjct: 403 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 462

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD F Y  L+ G    G L+ A  L +   ++G+   +V YN++I GYCK G M+ A++ 
Sbjct: 463 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 522

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
            ++M ++ + P+  T+S++IDG  K  ++D A  ++ EMV     P+V+
Sbjct: 523 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 199/446 (44%), Gaps = 31/446 (6%)

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ L+  L       E E +  +MR   + P     + ++  Y     V +ALE Y+ +L
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 217 H-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK--------------------FGV 255
             +   P+V+    L++ L K+G +  A  F   M K                     G 
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGC 216

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            PNI  YN LIDG+CK G++  A  L  E++     P V TY  +I G C  G  +  + 
Sbjct: 217 IPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDR 276

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL +M   G+  NV  YN++ID   K G + KA+     M E G +P++VT+++LI G C
Sbjct: 277 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSC 336

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           + G +  A  L  + + K L+P+   +T LI    K G          EM E    P + 
Sbjct: 337 RDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLV 396

Query: 436 TVSSLIHGLFKNGRISNALNF---FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           T  +L+HGL   G +  AL      LE+    D G       +Y  ++  LC   ++  A
Sbjct: 397 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG-------IYNILMSGLCKKFKLPAA 449

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
             L ++M   ++ PD   Y T++ G +R   + +   L    I+ G+ P  V    M++G
Sbjct: 450 KLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 509

Query: 553 YQENGDLKSAFRCSEFLKESRIGSSE 578
           Y + G +K A  C   +K+  +   E
Sbjct: 510 YCKFGMMKDAMACINRMKKRHLAPDE 535



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 36/340 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIKKGKFDSVW 104
           N  V++T+I A  + GHI +A+     IE +      P I   N L++G  + GK     
Sbjct: 289 NVQVYNTIIDARYKHGHIVKAV---ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 345

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           +  E+ +  GL+ +  +Y  LI   C QG   +A N   EM ++G +P +V Y  L+HGL
Sbjct: 346 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 405

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
               ++  A ++   M E GV P+   YN LM G CK   +  A     EML  ++ P+ 
Sbjct: 406 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA 465

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
             +  L+DG  + G L  A   F    + G+ P I  YN +I G+CK G + +AM+  + 
Sbjct: 466 FVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINR 525

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-----------EGIL------- 326
           M+K  ++PD FTY+ +I G      L+GA+ + ++M K           +G+L       
Sbjct: 526 MKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVMDGLQGLLLIIPSLF 585

Query: 327 --ANV-------VTYNSLIDGYCKEGDMEKALSVCSQMTE 357
             AN+       + Y+S++D Y  +G  E ++ + +   E
Sbjct: 586 AFANMECSELHCINYSSILDQYLPQGTSEASVILQTMFEE 625



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 25/289 (8%)

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
           F Y+ L+K L         E +L+ M  E +       + +I  Y   G +EKAL +   
Sbjct: 95  FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYF 154

Query: 355 MTEKGVE-PNVVTFSSLID--------------------GQCKAGNIDAAMGLYTEMVIK 393
           + +     P+V+  +SL++                    G CK G ++    L  +   +
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQ 214

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
             +P+++ +  LIDG  K G+M+    L+ E+      P+V T  ++I+G  K G     
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
               +E   +      + N  +Y  II A    G I+KA +    M     +PD  TY T
Sbjct: 275 DRLLMEMNSRG----LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 330

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++ G  R  ++ +   LL   +  G++P+      ++  Y + G    A
Sbjct: 331 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 379


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 197/361 (54%), Gaps = 10/361 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A  FY ++L   L P    F VLM  L ++GEL +A N F  M   GV   +  +N +I 
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG+L  A +L   M +  ++PDV+TY  LI+GLC VG++E A G+ +KM   G+  
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N V +  LID +CK+GD E  L +  +M E+GV P+ VT++++++G C+A ++ +A G+ 
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    L PD V +T LIDG  K+  +   + + + M+   +     T ++LI GL K 
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 339

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR ++A     E  +        P++  Y  +I A C  G +    +L  +M++   +P 
Sbjct: 340 GRSADAERVLGEMMEAG----LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG------DLKS 561
             TY  ++ G  +  +M +  MLL  MI +G+ PD +   +++ G+ ++G      +LKS
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 455

Query: 562 A 562
           A
Sbjct: 456 A 456



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 204/399 (51%), Gaps = 16/399 (4%)

Query: 62  FSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE---FYEEMVLC 113
           ++E G + +A     L + R I + P   +C  L++      +F +  E   FY +++  
Sbjct: 59  YAEEGLLPDACTLVLLALRRGIRLEPT--SCTGLMS------RFPTAPEACAFYLQLLDA 110

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL  +   + VL+      G++  A N+FDEM  +G+  TVV +  +I G+C    +  A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E++ R M E GV P++YTY AL+ G C+V  +  A   + +M    ++PN V F +L+D 
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            CK G+          M + GV P+   YN +++G C+A +L  A  +  EM    + PD
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             TY  LI G C   +L+ A  + Q M  EG+  + VTY +LI G  K G    A  V  
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M E G+EP+  T++ +ID  C+ G++   + L  EM  K   P VV +  +++G  K G
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            MK    L   M+   ++P   T + L+ G  K+G++++
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 449



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 203/389 (52%), Gaps = 13/389 (3%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A   + +++D G+ P   ++ +L+  L    ++  A+++F  M+  GV   + ++N ++
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C+  D++ A   +  M    + P+V T+G L+ GLC+VG +  A   F  M   G+ 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN  V+  LID HCK G+    + L  EM +  + PD  TYN ++ GLC    L+ A G+
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + +M   G+  + VTY +LIDGYCKE +++ A+ +   M  +GV  + VT+++LI G  K
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG    A  +  EM+   L PD   +T +ID   + G++K  LRL KEM      P V T
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398

Query: 437 VSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + +++G  K G++ NA   LN  +           SP+ + Y  ++   C  G++    
Sbjct: 399 YNVIMNGFCKLGQMKNADMLLNAMINIG-------VSPDDITYNILLDGHCKHGKVTDIE 451

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +L S   +    PD   YT+++  +++ K
Sbjct: 452 ELKS---AKGTVPDLGVYTSIVGEIVKKK 477



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 159/282 (56%), Gaps = 7/282 (2%)

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+   +N+L++ L  +G+L  A+ +  +M   G+   VV++N++I G C+ GD++ A 
Sbjct: 112 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 171

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  +M+E GV P+V T+ +LI G C+ G I+ A G++ +M  + + P+ VVFT LID  
Sbjct: 172 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 231

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K G+ +  L L++EM E  + P   T +++++GL +   + +A    +E   ++ G   
Sbjct: 232 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM--RSAG--L 287

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  +I   C + ++  A ++  +M ++ +  D  TYT ++ GL +A R  D   
Sbjct: 288 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 347

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L +M++ G+ PD     +++  +   GD+K+  R    LKE
Sbjct: 348 VLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR---LLKE 386



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 42/338 (12%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           +VF+ + S  + +   S F+T+I      G ++ A  ++R++    V P +    AL+ G
Sbjct: 137 NVFDEMQSRGVRRTVVS-FNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQG 195

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L + G+ +     +E+M   G+  + V + +LID  C +GD    L L  EM ++G+ P 
Sbjct: 196 LCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPD 255

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  +++GLC    +  A  +   MR  G+ P+  TY  L+DGYCK  +++ A+E   
Sbjct: 256 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 315

Query: 214 -----------------------------------EMLHHNLQPNVVTFGVLMDGLCKVG 238
                                              EM+   L+P+  T+ +++D  C+ G
Sbjct: 316 NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +++        M   G  P +  YN +++G CK G +  A  L + M    +SPD  TYN
Sbjct: 376 DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYN 435

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           IL+ G C  G++   E L      +G + ++  Y S++
Sbjct: 436 ILLDGHCKHGKVTDIEELKS---AKGTVPDLGVYTSIV 470



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 4/246 (1%)

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           ++   G+      +N L+    + G++  A +V  +M  +GV   VV+F+++I G C+AG
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A  L+  M    + PDV  + ALI GL + G +++   ++++M    + P+    +
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI    K G     L    E  ++       P+ V Y AI+  LC    +  AS +  +
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERG----VRPDAVTYNAIVNGLCRARDLKSASGIVVE 281

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           MRS  LRPD  TYTT++ G  + + +   M +  +M+  G+  D V    ++ G  + G 
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341

Query: 559 LKSAFR 564
              A R
Sbjct: 342 SADAER 347



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 4/225 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           Q+ + G+ P    F+ L+    + G + +A  ++ EM  + +   VV F  +I G+ + G
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++     L++ M EA +TP V+T  +LI GL + GRI +A   F    +K  G    PN 
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF----EKMCGRGMKPNA 221

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V++  +I A C  G      +L  +MR   +RPD  TY  ++ GL RA+ +     ++ +
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           M   G+ PD V    ++ GY +  +L  A    + +    +G  E
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDE 326


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 192/349 (55%), Gaps = 4/349 (1%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + F+ +I  FS  G+   ALW +R++  +   P +     ++ GL K+G     +E  EE
Sbjct: 241 ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEE 300

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNEN 168
           MV  G   +V T+  LID  C +G   KA  LF +++  +  +P V+ YT +I G C E+
Sbjct: 301 MVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED 360

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           K+  AE +   M+E G+VPN  TY  L+DG+CK  +  RA +  + M      PN+ T+ 
Sbjct: 361 KLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYN 420

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +++GLCK G ++ A        + G+ P+ F YN L+  HCK  N+ +A++L ++M K 
Sbjct: 421 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 480

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I PD+ +Y  LI   C   +++ +E   ++  + GI+    TY S+I GYC+EG++  A
Sbjct: 481 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 540

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP 397
           +    ++++ G  P+ +T+ ++I G CK    D A  LY  M+ K LVP
Sbjct: 541 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 242/507 (47%), Gaps = 15/507 (2%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           PKF   +   ++ A S +G+        R  E    +  C  ++    + G+     E  
Sbjct: 109 PKFRHFMRLYIVCAMSLIGN--------RNSEKACEVMRC--MVESFSEVGRLKEAVEMV 158

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM   GLV +  T   +I      G V  A  LF+EM  +G++P  + Y +++   C  
Sbjct: 159 IEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKI 218

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             ++EA+     M E G V +  T+  ++  +       RAL ++  ++   L+PN++ F
Sbjct: 219 GNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINF 278

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             +++GLCK G ++ A      M   G  PN++ +  LIDG CK G   +A  L  ++ +
Sbjct: 279 TCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVR 338

Query: 288 FE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
            E   P+V TY  +I G C   +L  AE LL +M ++G++ N  TY +LIDG+CK G+ E
Sbjct: 339 SENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFE 398

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A  + + M+ +G  PN+ T++++++G CK G +  A  +  +     L PD   +  L+
Sbjct: 399 RAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILM 458

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
               K  N+++ L L+ +ML+  I P + + ++LI    +  R+  +  FF E       
Sbjct: 459 SEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG-- 516

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P +  Y ++I   C +G +  A K F  +      PD+ TY  ++ GL +  +  +
Sbjct: 517 --IIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGY 553
              L   MI+ G+VP  V    +   Y
Sbjct: 575 ARSLYDSMIEKGLVPCEVTRITLAYEY 601



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 199/419 (47%), Gaps = 5/419 (1%)

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           ++  E    +   ++       ++ EA  M   M   G+VPN  T N ++    ++  V 
Sbjct: 128 NRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVE 187

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A   + EM    +QP+ +++ V++   CK+G +  A  +   M + G   +   +  +I
Sbjct: 188 YAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLII 247

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
                 G    A+     +    + P++  +  +I+GLC  G ++ A  +L++M  +G  
Sbjct: 248 SRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWK 307

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-KGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
            NV T+ SLIDG CK+G  EKA  +  ++   +  +PNV+T++++I G C+   ++ A  
Sbjct: 308 PNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEM 367

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           L + M  + LVP+   +T LIDG  K GN +    L   M     +P++ T +++++GL 
Sbjct: 368 LLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLC 427

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K GR+  A        D    G   P+   Y  ++   C    I +A  LF+ M    ++
Sbjct: 428 KRGRVQEAYKML---EDGFQNGL-KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQ 483

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           PD  +YTT++    R  RM +  M   + +++GI+P       M+ GY   G+L  A +
Sbjct: 484 PDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 542



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 6/311 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKI----EVLPAIQACNAL 90
             F  L  +    + P+V++  +LI    + G  E+A  ++ K+       P +    A+
Sbjct: 293 QAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 352

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           ++G  ++ K +        M   GLV +  TY  LID  C  G+  +A +L + M  +G 
Sbjct: 353 ISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGF 412

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P +  Y  +++GLC   ++ EA  M     + G+ P+ +TYN LM  +CK  ++ +AL 
Sbjct: 413 SPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALA 472

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +++ML   +QP++ ++  L+   C+   ++ +  FF    + G+ P    Y  +I G+C
Sbjct: 473 LFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYC 532

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + GNL  AM     +     +PD  TY  +I GLC   + + A  L   M ++G++   V
Sbjct: 533 REGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEV 592

Query: 331 TYNSLIDGYCK 341
           T  +L   YCK
Sbjct: 593 TRITLAYEYCK 603


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 238/491 (48%), Gaps = 7/491 (1%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL-CGLVADVVTYGVLIDCCCGQGD 134
           R+  + P     N L+ GL + G   +    + +M    G   D  +Y +LI   C  G 
Sbjct: 117 REAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGR 176

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A  +F +M      P V  YT+L+ GLC   ++ EAE++   M   GVVPN+ TYNA
Sbjct: 177 IDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNA 236

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G C+    +   +   +M      P+  T+  ++ GLCK G++             G
Sbjct: 237 LIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKG 296

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V   +  YN LI+G+CK G++  A+ +   M++  ++P V T+N +I G C  G++  A 
Sbjct: 297 VALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAM 356

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             L +M   G+  N VT+NSLI G C  G+ + AL +   M E GV P+  T++  ID  
Sbjct: 357 AFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDAL 416

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           C  G ++ A  L++ + +K +    V++T+L+ G  + G++     L ++M      P V
Sbjct: 417 CDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI GL K  R+  A++      DK       P    +  +I+ + +D +   A+K
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLL----DKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 495 LFSDMRSDNLRPDNCTYTTMLR--GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           ++  M S   +PD  TYT  +       A +  ++ M + +M + G+ PD      +++ 
Sbjct: 533 MYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKA 592

Query: 553 YQENGDLKSAF 563
           Y + G  + AF
Sbjct: 593 YVDAGLKEKAF 603



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 218/464 (46%), Gaps = 5/464 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++ LI      G I++A  V+ K+      P +     LL+GL K  +         EMV
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+V +VVTY  LI   C +G       L ++M  +   P    YT ++HGLC   K+ 
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
               +       GV   + TYNAL++GYCK  D+  AL+    M  + + P V TF  ++
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C  G++  A  F   MA  G+ PN   +N LI G C  G    A+ L   ME++ + 
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY I I  LC  GQLE A  L   +  +GI A+ V Y SL+ GYC+ GD++ A  +
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M  +   P+V T+++LIDG CK   +D A+ L  +M  + + P    F  LI  +  
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           D    +  ++Y++M+ +   P   T +  I   +  G      N  +   +  + G   P
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEE-NIDMAVVEMHEAGV-FP 581

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
           +   Y AII+A    G   KA      M S  + PD  TY+ +L
Sbjct: 582 DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 201/455 (44%), Gaps = 52/455 (11%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM-- 196
           L  F  M+  G  P    Y  LI+  C    + +A +    MRE G+ P+ +TYN LM  
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 197 ----------------------------------DGYCKVADVNRALEFYHEMLHHNLQP 222
                                              G C    ++ A   + +M     +P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
            V T+ VL+DGLCKV  +  A      M   GV PN+  YN LI G C+ G   +   L 
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +ME    SPD +TY  ++ GLC  G++     +L +   +G+   V+TYN+LI+GYCK 
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKG 314

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           GDM+ AL V   M    V P V TF+ +I G C  G +  AM   T+M    L P+ V F
Sbjct: 315 GDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTF 374

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            +LI G    G  K  LRL   M E  + P   T +  I  L   G++  A + F     
Sbjct: 375 NSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF----- 429

Query: 463 KTDGGYCSP------NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
                 C P      ++V+Y +++   C  G I  A  L   M S+N  PD  TY T++ 
Sbjct: 430 -----SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 517 GLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           GL + KR+   + LL  M K GI P      ++++
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 197/388 (50%), Gaps = 5/388 (1%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F +M + G  PN  TYN L++ +CK+A +  A      M    L P+  T+  LM GLC+
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 237 VGELRAAGNFFVHMA-KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
            G L AA   FV M  ++G   + + Y  LI G C AG + +A  + ++M +    P V 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY +L+ GLC V ++  AE LL +M  +G++ NVVTYN+LI G C+EG  +    +  +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
             +   P+  T++ ++ G CK G +     +  E + K +  +V+ + ALI+G  K G+M
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
           K  L + + M   ++ P V T + +IHG    G++  A+ F  +      G   SPN V 
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA----GAGLSPNTVT 373

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           + ++I   C  G+   A +L   M    + PD  TY   +  L    ++ +   L + + 
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLP 433

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAF 563
             GI    VI   +V GY + GD+ SAF
Sbjct: 434 MKGIKAHNVIYTSLVHGYCQVGDIDSAF 461



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 239/566 (42%), Gaps = 94/566 (16%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V+P +   NAL+ GL ++G+FD V +  E+M +     D  TY  ++   C  G V    
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +  E I KG+   V+ Y  LI+G C    M  A  + + M+   V P + T+N ++ G+
Sbjct: 287 KVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGF 346

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C    V++A+ F  +M    L PN VTF  L+ G C VGE + A      M ++GV P+ 
Sbjct: 347 CCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDR 406

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y   ID  C  G L EA SL S +    I      Y  L+ G C VG ++ A GL++K
Sbjct: 407 QTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEK 466

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI-------- 371
           M  E  + +V TYN+LIDG CK   +++A+ +  +M ++G+EP   TF+ LI        
Sbjct: 467 MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526

Query: 372 --------------------------------DGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
                                           +G  K  NID A+    EM    + PDV
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAV---VEMHEAGVFPDV 583

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL--------FKNGRIS 451
             + A+I      G  ++    + +ML   I P   T S L++ +        F N +I 
Sbjct: 584 ETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIW 643

Query: 452 NALNF-----FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI----------------- 489
             ++        E+  ++D    +P    Y A+++ LC   ++                 
Sbjct: 644 KMVDVRNLQELFEQMCESDA---APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILL 700

Query: 490 ------------------LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
                              +A + F  M   + +P   +   +L GL  +      + + 
Sbjct: 701 DEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIF 760

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENG 557
           +DM+ +G   D V+ ++++    E G
Sbjct: 761 SDMLGLGYNYDEVVWKLLIDCLHEKG 786



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 5/326 (1%)

Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
           F  M K G  PN   YN LI+ HCK   L +A +    M +  ++PD FTYN L+ GLC 
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 307 VGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
            G L  A GL  +M +  G   +  +Y  LI G C  G ++ A  V ++M+     P V 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           T++ L+DG CK   +  A  L  EMV K +VP+VV + ALI GL ++G   +  +L ++M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
              + +P  +T + ++HGL K+G++ +      E   K      +   + Y A+I   C 
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKG----VALEVLTYNALINGYCK 313

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A  +   M+ + + P   T+  ++ G     ++   M  L  M   G+ P+ V 
Sbjct: 314 GGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVT 373

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKE 571
              ++ G    G+ K A R  + ++E
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEE 399



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 207/500 (41%), Gaps = 97/500 (19%)

Query: 37  SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
           +  + L  ++  + NP V  F+ +I  F   G + +A+    ++    + P     N+L+
Sbjct: 319 AALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLI 378

Query: 92  NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
           +G    G+        + M   G++ D  TY + ID  C +G + +A +LF  +  KGI+
Sbjct: 379 SGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIK 438

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
              VIYT L+HG C    +  A  +   M     +P+++TYN L+DG CKV  ++RA++ 
Sbjct: 439 AHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDL 498

Query: 212 YHEMLHHNLQPNVVTFGVLMDGL--------------------CKVGE----LRAAGNFF 247
             +M    ++P   TF +L+  +                    CK  +    L+ + ++F
Sbjct: 499 LDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWF 558

Query: 248 -------------VHMAKFGVFPNIFVYNCLIDGHCKAG--------------------- 273
                        V M + GVFP++  YN +I  +  AG                     
Sbjct: 559 EGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDC 618

Query: 274 ----------------------------NLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
                                       ++     L  +M + + +P + TY  L++GLC
Sbjct: 619 TTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLC 678

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ---MTEKGVEP 362
              +LE  E LL KM    IL +    + L+  YC   ++E     C Q   M  +  +P
Sbjct: 679 NQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYC---NLEMYREACEQFRSMAHQSFQP 735

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
            + +   L+ G C +G+   A+ ++++M+      D VV+  LID L + G+    L + 
Sbjct: 736 GLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEML 795

Query: 423 KEMLEAKITPSVFTVSSLIH 442
             M   K   S  T +SL+ 
Sbjct: 796 SVMDAKKCVASTRTYASLVR 815



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 5/256 (1%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M K G   N  TYN+LI+ +CK   +  A +   +M E G+ P+  T++ L+ G C+AG 
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 380 IDAAMGLYTEMVIK-SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           + AA GL+ +M  +     D   +T LI GL   G + +  R++ +M      P V T +
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+ GL K  R+  A     E  +K       PN V Y A+I  LC +G+    +KL   
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKG----VVPNVVTYNALIGGLCQEGRFDDVTKLLEK 256

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M      PD  TYT ++ GL +  ++     +L + I  G+  + +    ++ GY + GD
Sbjct: 257 MEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGD 316

Query: 559 LKSAFRCSEFLKESRI 574
           +K+A    + +K +R+
Sbjct: 317 MKAALDVLQLMKRNRV 332


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 262/586 (44%), Gaps = 45/586 (7%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           F  +AN+K +K+     + + E L   R+   V Y +      LE    +  +F ++I +
Sbjct: 63  FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM--KLEGISCSEDLFISVIGS 120

Query: 62  FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G  E+AL  + +++   V P ++  N +L+ L+ + +F  +   Y  M   G+  +
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V TY +L+   C    V  A  L  EM  KG +P  V YT LI  LC   K+ EA  +  
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM 240

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           S       P++  YNAL++G CK      A +   EM++  + PNV+++  +++ L   G
Sbjct: 241 SF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  +      M   G  PN+  +  LI G    G   EA+     M +  + P+V  YN
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GLC    L  A  +  +M   G   NV TY++LIDGY K GD++ A  V + M   
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  PNVV ++ ++D  C+    + A  L   M +++  P+ V F   I GL   G +   
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG------------ 466
           ++++ +M  +   P+  T + L+  L K+ R   A  F L K  +  G            
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA--FGLVKDMEHRGIELNLVTYNTII 533

Query: 467 -GYC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            GYC                     P+ +    +I A C  G++  A +L   + +    
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWH 593

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           PD   YT+++ G+     + + ++ L  M+  GI P+     V+VR
Sbjct: 594 PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 37/438 (8%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++TLI +  ++G ++EA  +   +   P++   NAL+NG+ K+  F+  ++  +EM+  G
Sbjct: 219 YTTLISSLCKLGKVKEAREL--AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276

Query: 115 LVADVVTYGVLIDCCCGQGDV-----------------------------------MKAL 139
           +  +V++Y  +I+     G+V                                    +AL
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           + +D MI +G+ P VV Y  L+HGLC++  + +A S+F  M   G  PN+ TY+AL+DGY
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
            K  D++ A E ++ M+ H   PNVV +  ++D LC+      A     +M      PN 
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +N  I G C +G +  A+ +  +M      P+  TYN L+  L    +   A GL++ 
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   GI  N+VTYN++I GYC  G + +AL +  +M  +G +P+ +T + +ID  CK G 
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           ++ A+ L   +      PD++ +T+LI G+     ++E +   + ML   I+P+V T + 
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636

Query: 440 LIHGLFKNGRISNALNFF 457
           L+  LF N   S A+ F 
Sbjct: 637 LVRHLFSNMGHSGAVQFL 654



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 242/519 (46%), Gaps = 44/519 (8%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++  L  + + D V    ++M L G+      +  +I      G   +AL  F  M D  
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           ++PTV IY  ++  L +EN+      ++ +M++ G+ PN++TYN L+   CK   V+ A 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +   EM      P+ V++  L+  LCK+G+++ A    +        P++ VYN LI+G 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----PSVPVYNALINGV 256

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY-------- 321
           CK     EA  L  EM    I P+V +Y  +I  L   G +E +  +L KM+        
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 322 ---------------------------KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
                                      +EG++ NVV YN+L+ G C +  +  A+SV +Q
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G  PNV T+S+LIDG  KAG++D A  ++  M+     P+VV +T ++D L ++  
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             +   L + M      P+  T ++ I GL  +GR+  A+  F    D+     C PN  
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVF----DQMGNSGCFPNTT 492

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  ++ +L  D +  +A  L  DM    +  +  TY T++ G   A  + + + LL  M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           +  G  PDA+   +++  Y + G +  A +  + L   +
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 208/434 (47%), Gaps = 10/434 (2%)

Query: 132 QGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           + D+  AL  F  + + K  + T + Y ++I  L +E +M   + + + M+  G+  +  
Sbjct: 53  EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            + +++  Y +     +AL+ ++ M    ++P V  +  ++D L      +     + +M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G+ PN+F YN L+   CK   +  A  L  EM      PD  +Y  LI  LC +G++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L           +V  YN+LI+G CKE   E+A  +  +M  KG++PNV++++++
Sbjct: 233 KEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+    AGN++ ++ +  +M  +   P++  FT+LI G    G   E L  +  M+   +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+V   ++L+HGL     + +A++ F    ++ +   C PN   Y+A+I      G + 
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVF----NQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            AS++++ M +    P+   YT M+  L R         L+ +M      P+ V     +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 551 RGYQENGDLKSAFR 564
           +G   +G +  A +
Sbjct: 464 KGLCGSGRVDWAIK 477


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 224/427 (52%), Gaps = 22/427 (5%)

Query: 43  NSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKK 97
           + L++    PS+  F+T+I  +  +G ++ A  V  KI  +   P       L+ GL   
Sbjct: 72  HRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLN 131

Query: 98  GKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIY 157
           GK      F++ ++  G   + V+YG+LI+  C  G+   AL +  ++  K +   VV+Y
Sbjct: 132 GKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMY 191

Query: 158 TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           + +I  LC E  + EA  ++  M    V P++ T++AL+ G+C V     A   +HEM+ 
Sbjct: 192 STIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVL 251

Query: 218 HNLQPNVVTFGVLMDGLCK-----------------VGELRAAGNFFVHMAKFGVFPNIF 260
            N+ P+V TF +L+D LCK                 V ++  A + F  + K  V P++ 
Sbjct: 252 TNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVH 311

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  +I   CK   + EA+SL +EM    I+PD  TY+ LI GLC   ++  A  LL +M
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           +  G  A+V+TY S +   CK   ++KA+++  ++ ++G++PN+ T++ LIDG CK G  
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           + A  ++ +++IK     V  +  +I+GL  +G   E + L ++M +   TP V T  ++
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491

Query: 441 IHGLFKN 447
           I  LFKN
Sbjct: 492 IRALFKN 498



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 226/482 (46%), Gaps = 23/482 (4%)

Query: 82  PAIQACNALLNGLIKKGK--FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           P+I   N +L  L+K     +      Y  + L  +   +VT+  +I+C C  G++  A 
Sbjct: 44  PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
           ++  +++  G  P  +  T LI GLC   K+ EA      +   G   N  +Y  L++G 
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+ +   AL+   ++    +  NVV +  ++D LCK   +  A   +  M    V P++
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             ++ LI G C  G   EA  L  EM    I+PDV T+NIL+  LC  G  +  + +L  
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 320 MYKE-----------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
           M KE                  +  +V +Y  +I   CK   +++ALS+ ++M  KG+ P
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           + VT+SSLIDG CK+  I  A  L  +M  +    DV+ +T+ +  L K+  + + + L 
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
           K++ +  I P++ T + LI GL K GR  NA   F    D    GY       Y  +I  
Sbjct: 404 KKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIF---QDLLIKGY-KVTVWTYNIMING 459

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC +G   +A  L   M  +   PD  TY T++R L +         LL +MI  G++ +
Sbjct: 460 LCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519

Query: 543 AV 544
            V
Sbjct: 520 KV 521



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 214/438 (48%), Gaps = 21/438 (4%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++L+  +    I P++V +  +I+  C+  +M  A S+   + + G  P+  T   L+ 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
           G C    V+ AL F+  ++    + N V++G+L++GLCK+GE RAA      +    V  
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +Y+ +ID  CK   + EA  L S+M   ++SPDV T++ LI G C VGQ + A GL 
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-----------------KGV 360
            +M    I  +V T+N L+D  CKEG  ++  +V + M +                 + V
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV 306

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P+V +++ +I   CK   +D A+ L+ EM  K + PD V +++LIDGL K   +     
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWE 366

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  +M        V T +S +H L KN ++  A+   L K  K  G    PN   Y  +I
Sbjct: 367 LLDQMHARGQPADVITYTSFLHALCKNHQVDKAVA--LVKKIKDQG--IQPNINTYNILI 422

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC +G+   A  +F D+     +    TY  M+ GL       + M LL  M   G  
Sbjct: 423 DGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCT 482

Query: 541 PDAVINQVMVRGYQENGD 558
           PD V  + ++R   +N +
Sbjct: 483 PDVVTYETIIRALFKNDE 500



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 199/410 (48%), Gaps = 23/410 (5%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR--ALEFYHEMLHHNLQPNVVTFGV 229
           +A S F  M      P++  +N ++    K  + N   A+  YH +  + + P++VTF  
Sbjct: 29  DAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNT 88

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +++  C +GE+  A +    + K G  P+      LI G C  G + EA+     +    
Sbjct: 89  VINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARG 148

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              +  +Y ILI GLC +G+   A  +L+K+  + +  NVV Y+++ID  CKE  + +A 
Sbjct: 149 FRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAY 208

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + SQM  K V P+VVTFS+LI G C  G    A GL+ EMV+ ++ PDV  F  L+D L
Sbjct: 209 ELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268

Query: 410 SKDGNMKETLRLYKEMLEA-----------------KITPSVFTVSSLIHGLFKNGRISN 452
            K+G+ KET  +   M++                  ++TP V + + +I  L K   +  
Sbjct: 269 CKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDE 328

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           AL+ F E   K      +P+ V Y+++I  LC   +I  A +L   M +     D  TYT
Sbjct: 329 ALSLFNEMRCKG----ITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYT 384

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + L  L +  ++   + L+  +   GI P+     +++ G  + G  ++A
Sbjct: 385 SFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENA 434



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 20/372 (5%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   +  LI    +MG    AL V RKI+   V   +   + +++ L K+      +E
Sbjct: 150 RLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYE 209

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y +M++  +  DVVT+  LI   C  G   +A  LF EM+   I P V  + IL+  LC
Sbjct: 210 LYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALC 269

Query: 166 NE-----------------NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            E                 N++ +A+ +F  + +  V P++++Y  ++   CK+  V+ A
Sbjct: 270 KEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEA 329

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L  ++EM    + P+ VT+  L+DGLCK   +  A      M   G   ++  Y   +  
Sbjct: 330 LSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHA 389

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK   + +A++L  +++   I P++ TYNILI GLC  G+ E A+ + Q +  +G    
Sbjct: 390 LCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVT 449

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           V TYN +I+G C EG  ++A+++  +M + G  P+VVT+ ++I    K      A  L  
Sbjct: 450 VWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLR 509

Query: 389 EMVIKSLVPDVV 400
           EM+ + L+ + V
Sbjct: 510 EMIARGLLEEKV 521



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 185/386 (47%), Gaps = 15/386 (3%)

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE--LRAAGNFFVHMAKFGVFPNIFV 261
           DV+ A+  ++ ML  N  P+++ F  ++  L K        A + +  +    + P+I  
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           +N +I+ +C  G +  A S+ +++ K    PD  T   LIKGLC  G++  A      + 
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   N V+Y  LI+G CK G+   AL V  ++  K V  NVV +S++ID  CK   + 
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  LY++M++K + PDVV F+ALI G    G  KE   L+ EM+   I P V T + L+
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265

Query: 442 HGLFKNG---RISNALNFFLEKTDKTDGG----------YCSPNHVLYAAIIQALCYDGQ 488
             L K G      N L   +++ ++ +              +P+   Y  II+ LC    
Sbjct: 266 DALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKM 325

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A  LF++MR   + PD  TY++++ GL +++R+     LL  M   G   D +    
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 549 MVRGYQENGDLKSAFRCSEFLKESRI 574
            +    +N  +  A    + +K+  I
Sbjct: 386 FLHALCKNHQVDKAVALVKKIKDQGI 411


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 269/609 (44%), Gaps = 48/609 (7%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
           F  +AN+K +K+     + + E L   R+   V Y +      LE    +  +F ++I +
Sbjct: 63  FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM--KLEGISCSEDLFISVIGS 120

Query: 62  FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
           +   G  E+AL  + +++   V P ++  N +L+ L+ + +F  +   Y  M   G+  +
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
           V TY +L+   C    V  A  L  EM  KG +P  V YT LI  LC   K+ EA  +  
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM 240

Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
           S       P++  YNAL++G CK      A +   EM++  + PNV+++  +++ L   G
Sbjct: 241 SF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
            +  +      M   G  PN+  +  LI G    G   EA+     M +  + P+V  YN
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            L+ GLC    L  A  +  +M   G   NV TY++LIDGY K GD++ A  V + M   
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G  PNVV ++ ++D  C+    + A  L   M +++  P+ V F   I GL   G +   
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG------------ 466
           ++++ +M  +   P+  T + L+  L K+ R   A  F L K  +  G            
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA--FGLVKDMEHRGIELNLVTYNTII 533

Query: 467 -GYC--------------------SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
            GYC                     P+ +    +I A C  G++  A +L   + +    
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWH 593

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
           PD   YT+++ G+     + + ++ L  M+  GI P+     V+VR    N     A   
Sbjct: 594 PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAV-- 651

Query: 566 SEFLKESRI 574
            +FL  S I
Sbjct: 652 -QFLDASSI 659



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 208/434 (47%), Gaps = 10/434 (2%)

Query: 132 QGDVMKALNLFDEMID-KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
           + D+  AL  F  + + K  + T + Y ++I  L +E +M   + + + M+  G+  +  
Sbjct: 53  EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            + +++  Y +     +AL+ ++ M    ++P V  +  ++D L      +     + +M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
            K G+ PN+F YN L+   CK   +  A  L  EM      PD  +Y  LI  LC +G++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  L           +V  YN+LI+G CKE   E+A  +  +M  KG++PNV++++++
Sbjct: 233 KEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I+    AGN++ ++ +  +M  +   P++  FT+LI G    G   E L  +  M+   +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            P+V   ++L+HGL     + +A++ F    ++ +   C PN   Y+A+I      G + 
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVF----NQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            AS++++ M +    P+   YT M+  L R         L+ +M      P+ V     +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 551 RGYQENGDLKSAFR 564
           +G   +G +  A +
Sbjct: 464 KGLCGSGRVDWAIK 477


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 225/423 (53%), Gaps = 4/423 (0%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + LL  + K  K+++V   +  + + G+  D+ ++  LIDC C    +  AL+
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +M+  G EP++V +  L++G C+ N++ EA S+   +   G  PN+  YN ++D  C
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   V+ AL+  + M    ++P+V+T+  L+  L   G+   +      M + G+ P++ 
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            ++ +ID   K G L EA     EM +  + P++ TYN LI GLC  G L+ A+ +L  M
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   N VTYN+L++GYCK   ++ A+ +   M+  GV+ +  T+++L  G C+AG  
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           +AA  +   MV   ++PD+  F  L+DGL + G +++ L   +++ +++    + T + +
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I G+ K  ++ +A   F     K      SP+ + Y  ++  L      L+A +L+  M+
Sbjct: 430 IKGMCKANKVEDAWYLFCSLALKG----VSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485

Query: 501 SDN 503
            D+
Sbjct: 486 KDD 488



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 191/374 (51%), Gaps = 3/374 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           FSTLI  F     +  AL    K+  L   P+I    +L+NG     +        +++V
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV 170

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +VV Y  +ID  C    V  AL++ + M   GI P V+ Y  LI  L +  K  
Sbjct: 171 GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWG 230

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            +  +   M   G+ P++ T++A++D + K   +  A + Y EM+  ++ PN+VT+  L+
Sbjct: 231 VSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLI 290

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           +GLC  G L  A      M   G FPN   YN L++G+CK+  + +AM +   M    + 
Sbjct: 291 NGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVD 350

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D FTYN L +G C  GQ   AE +L +M   G+L ++ T+N L+DG C+ G +EKAL  
Sbjct: 351 GDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVK 410

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              + +      ++T++ +I G CKA  ++ A  L+  + +K + PDV+ +T ++ GL +
Sbjct: 411 LEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470

Query: 412 DGNMKETLRLYKEM 425
                E   LY++M
Sbjct: 471 KRLWLEAHELYRKM 484



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 212/420 (50%), Gaps = 8/420 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL LF +M +    P++V ++ L+  +    K     S+FR +   G+  +LY+++ L+D
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ + ++ AL    +M+    +P++VTFG L++G C V  ++ A +    +   G  P
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +ID  C+   +  A+ + + MEK  I PDV TYN LI  L   G+   +  +L
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M + GI  +V+T++++ID + KEG + +A     +M ++ V+PN+VT++SLI+G C  
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  +   MV K   P+ V +  L++G  K   + + +++   M    +    FT 
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTY 356

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
           ++L  G  + G+ + A               C   P+   +  ++  LC  G+I KA   
Sbjct: 357 NTLYQGYCQAGQFNAAEKVLARMVS------CGVLPDIYTFNMLLDGLCEHGKIEKALVK 410

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             D++         TY  +++G+ +A ++ D   L   +   G+ PD +    M+ G + 
Sbjct: 411 LEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 193/370 (52%), Gaps = 10/370 (2%)

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N AL  + +M      P++V F  L+  + K+ +  A  + F H+   G+  +++ ++ L
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ID  C+   L  A+S   +M K    P + T+  L+ G C V +++ A  L+ ++   G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVV YN++ID  C+   ++ AL V + M + G+ P+V+T++SLI     +G    +  
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+   + PDV+ F+A+ID   K+G + E  + Y EM++  + P++ T +SLI+GL 
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 446 KNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            +G +  A   LNF + K      G+  PN V Y  ++   C   ++  A K+   M  D
Sbjct: 295 IHGLLDEAKKVLNFMVSK------GF-FPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHD 347

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  D  TY T+ +G  +A +      +LA M+  G++PD     +++ G  E+G ++ A
Sbjct: 348 GVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKA 407

Query: 563 FRCSEFLKES 572
               E L++S
Sbjct: 408 LVKLEDLQKS 417



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 168/352 (47%), Gaps = 13/352 (3%)

Query: 220 LQPNVVTFGVLMDGLCKVGELRA---------AGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           L  NV  FG    G      LR+         A   F  MA+    P+I  ++ L+    
Sbjct: 25  LSLNVCNFGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIA 84

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K       +SL   +E   IS D+++++ LI   C   +L  A   L KM K G   ++V
Sbjct: 85  KLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIV 144

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ SL++G+C    +++A+S+  Q+   G EPNVV ++++ID  C+   +D A+ +   M
Sbjct: 145 TFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM 204

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               + PDV+ + +LI  L   G    + R+  +M+   I P V T S++I    K G++
Sbjct: 205 EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQL 264

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             A   + E   ++      PN V Y ++I  LC  G + +A K+ + M S    P+  T
Sbjct: 265 LEAKKQYDEMIQRS----VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT 320

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           Y T++ G  ++KR+ D M +L  M   G+  D      + +GY + G   +A
Sbjct: 321 YNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL   + + G    A  V  ++    VLP I   N LL+GL + GK +      E++ 
Sbjct: 356 YNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQ 415

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
               V  ++TY ++I   C    V  A  LF  +  KG+ P V+ YT ++ GL  +   +
Sbjct: 416 KSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWL 475

Query: 172 EAESMFRSM-RECGVVP 187
           EA  ++R M ++ G++P
Sbjct: 476 EAHELYRKMKKDDGLMP 492


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 197/361 (54%), Gaps = 10/361 (2%)

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A  FY ++L   L P    F VLM  L ++GEL +A N F  M   GV   +  +N +I 
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+AG+L  A +L   M +  ++PDV+TY  LI+GLC VG++E A G+ +KM   G+  
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N V +  LID +CK+GD E  L +  +M E+GV P+ VT++++++G C+A ++ +A G+ 
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM    L PD V +T LIDG  K+  +   + + + M+   +     T ++LI GL K 
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 463

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           GR ++A     E  +        P++  Y  +I A C  G +    +L  +M++   +P 
Sbjct: 464 GRSADAERVLGEMMEAG----LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 519

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG------DLKS 561
             TY  ++ G  +  +M +  MLL  MI +G+ PD +   +++ G+ ++G      +LKS
Sbjct: 520 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 579

Query: 562 A 562
           A
Sbjct: 580 A 580



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 204/399 (51%), Gaps = 16/399 (4%)

Query: 62  FSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE---FYEEMVLC 113
           ++E G + +A     L + R I + P   +C  L++      +F +  E   FY +++  
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPT--SCTGLMS------RFPTAPEACAFYLQLLDA 234

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL  +   + VL+      G++  A N+FDEM  +G+  TVV +  +I G+C    +  A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           E++ R M E GV P++YTY AL+ G C+V  +  A   + +M    ++PN V F +L+D 
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
            CK G+          M + GV P+   YN +++G C+A +L  A  +  EM    + PD
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
             TY  LI G C   +L+ A  + Q M  EG+  + VTY +LI G  K G    A  V  
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           +M E G+EP+  T++ +ID  C+ G++   + L  EM  K   P VV +  +++G  K G
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
            MK    L   M+   ++P   T + L+ G  K+G++++
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 573



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 203/389 (52%), Gaps = 13/389 (3%)

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A   + +++D G+ P   ++ +L+  L    ++  A+++F  M+  GV   + ++N ++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C+  D++ A   +  M    + P+V T+G L+ GLC+VG +  A   F  M   G+ 
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           PN  V+  LID HCK G+    + L  EM +  + PD  TYN ++ GLC    L+ A G+
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           + +M   G+  + VTY +LIDGYCKE +++ A+ +   M  +GV  + VT+++LI G  K
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
           AG    A  +  EM+   L PD   +T +ID   + G++K  LRL KEM      P V T
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522

Query: 437 VSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            + +++G  K G++ NA   LN  +           SP+ + Y  ++   C  G++    
Sbjct: 523 YNVIMNGFCKLGQMKNADMLLNAMINIG-------VSPDDITYNILLDGHCKHGKVTDIE 575

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
           +L S   +    PD   YT+++  +++ K
Sbjct: 576 ELKS---AKGTVPDLGVYTSIVGEIVKKK 601



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 159/282 (56%), Gaps = 7/282 (2%)

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+   +N+L++ L  +G+L  A+ +  +M   G+   VV++N++I G C+ GD++ A 
Sbjct: 236 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 295

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           ++  +M+E GV P+V T+ +LI G C+ G I+ A G++ +M  + + P+ VVFT LID  
Sbjct: 296 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 355

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K G+ +  L L++EM E  + P   T +++++GL +   + +A    +E   ++ G   
Sbjct: 356 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM--RSAG--L 411

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  +I   C + ++  A ++  +M ++ +  D  TYT ++ GL +A R  D   
Sbjct: 412 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 471

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +L +M++ G+ PD     +++  +   GD+K+  R    LKE
Sbjct: 472 VLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR---LLKE 510



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 42/344 (12%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
           +VF+ + S  + +   S F+T+I      G ++ A  ++R++    V P +    AL+ G
Sbjct: 261 NVFDEMQSRGVRRTVVS-FNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQG 319

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           L + G+ +     +E+M   G+  + V + +LID  C +GD    L L  EM ++G+ P 
Sbjct: 320 LCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPD 379

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
            V Y  +++GLC    +  A  +   MR  G+ P+  TY  L+DGYCK  +++ A+E   
Sbjct: 380 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 439

Query: 214 -----------------------------------EMLHHNLQPNVVTFGVLMDGLCKVG 238
                                              EM+   L+P+  T+ +++D  C+ G
Sbjct: 440 NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           +++        M   G  P +  YN +++G CK G +  A  L + M    +SPD  TYN
Sbjct: 500 DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYN 559

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
           IL+ G C  G++   E L      +G + ++  Y S++    K+
Sbjct: 560 ILLDGHCKHGKVTDIEELKS---AKGTVPDLGVYTSIVGEIVKK 600



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 4/246 (1%)

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           ++   G+      +N L+    + G++  A +V  +M  +GV   VV+F+++I G C+AG
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
           ++D A  L+  M    + PDV  + ALI GL + G +++   ++++M    + P+    +
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI    K G     L    E  ++       P+ V Y AI+  LC    +  AS +  +
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERG----VRPDAVTYNAIVNGLCRARDLKSASGIVVE 405

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           MRS  LRPD  TYTT++ G  + + +   M +  +M+  G+  D V    ++ G  + G 
Sbjct: 406 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465

Query: 559 LKSAFR 564
              A R
Sbjct: 466 SADAER 471



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 4/225 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           Q+ + G+ P    F+ L+    + G + +A  ++ EM  + +   VV F  +I G+ + G
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++     L++ M EA +TP V+T  +LI GL + GRI +A   F    +K  G    PN 
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF----EKMCGRGMKPNA 345

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V++  +I A C  G      +L  +MR   +RPD  TY  ++ GL RA+ +     ++ +
Sbjct: 346 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 405

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           M   G+ PD V    ++ GY +  +L  A    + +    +G  E
Sbjct: 406 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDE 450


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 225/465 (48%), Gaps = 8/465 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   ++  FSE+G + EA+ +   ++   + P+    N +L   I+ G  D     ++EM
Sbjct: 172 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEM 231

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + G+  D  ++ +++  C   G + +A      MI +G  P     T+++  LC    +
Sbjct: 232 SVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLV 291

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A   FR M + G  PNL  + +L+DG CK   + +A E   EM+ +  +PNV T   L
Sbjct: 292 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G    A   F+ + +  ++ PN+  Y  +I G+CK   L  A  L S M++  
Sbjct: 352 IDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 411

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+V TY  LI G C  G  + A  L+  M  EG   N+ TYN++ID  CK+    +A 
Sbjct: 412 LFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY 471

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++    G+E + VT++ LI  QCK  +I  A+  +  M       D+ +   LI   
Sbjct: 472 ELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAF 531

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   MKE+ RL++ ++   + P+  T +S+I G  K G    AL +F     K  G  C
Sbjct: 532 CRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYF--HNMKRHG--C 587

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
            P+   Y ++I  LC    + +A KL+  M    L P   T  T+
Sbjct: 588 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 632



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 211/437 (48%), Gaps = 12/437 (2%)

Query: 57  TLII-AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           TLI+ A  E G +  A+W +RK+  L   P +    +L++GL KKG     +E  EEMV 
Sbjct: 279 TLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 338

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMV 171
            G   +V T+  LID  C +G   KA  LF +++   I +P V  YT +I G C E+K+ 
Sbjct: 339 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLN 398

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +F  M+E G+ PN+ TY  L++G+CK  + +RA E  + M     +PN+ T+  ++
Sbjct: 399 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVI 458

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK      A          G+  +   Y  LI   CK  ++ +A++    M K    
Sbjct: 459 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFE 518

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D+   NILI   C   +++ +E L Q +   G++    TY S+I GYCKEGD + AL  
Sbjct: 519 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKY 578

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G  P+  T+ SLI G CK   +D A  LY  M+ + L P  V    L     K
Sbjct: 579 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 638

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             +    + +  E L+ K+   + TV +L+  L    ++  A  FF +  +K      S 
Sbjct: 639 RNDSASAM-IVLEPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS----SA 691

Query: 472 NHVLYAAIIQALCYDGQ 488
           + V  AA   A    G+
Sbjct: 692 DRVTLAAFTTACSESGK 708



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 215/450 (47%), Gaps = 5/450 (1%)

Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
           GL    +T   +++     G +  A N+FDEM  +G+ P    + +++ G   + K+ EA
Sbjct: 200 GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA 259

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
           +     M + G +P+  T   ++   C+   VNRA+ ++ +M+    +PN++ F  L+DG
Sbjct: 260 DRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 319

Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI-SP 292
           LCK G ++ A      M + G  PN++ +  LIDG CK G   +A  L  ++ + +I  P
Sbjct: 320 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKP 379

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V TY  +I G C   +L  AE L  +M ++G+  NV TY +LI+G+CK G+ ++A  + 
Sbjct: 380 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELM 439

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           + M ++G  PN+ T++++ID  CK      A  L  +     L  D V +T LI    K 
Sbjct: 440 NLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 499

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
            ++K+ L  +  M +      +   + LI    +  ++  +   F             P 
Sbjct: 500 SDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG----LVPT 555

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              Y ++I   C +G    A K F +M+     PD+ TY +++ GL +   + +   L  
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            MI  G+ P  V    +   Y +  D  SA
Sbjct: 616 AMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 204/421 (48%), Gaps = 5/421 (1%)

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G + +A+ +  +M ++G+ P+ +    ++        +  AE++F  M   GV P+  ++
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
             ++ G  +   +  A  +   M+     P+  T  +++  LC+ G +  A  +F  M  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN+  +  LIDG CK G++ +A  +  EM +    P+V+T+  LI GLC  G  E 
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 313 AEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
           A  L  K+ +  I   NV TY S+I GYCKE  + +A  + S+M E+G+ PNV T+++LI
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G CKAGN D A  L   M  +   P++  + A+ID L K     E   L  +     + 
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T + LI    K   I  AL FF  + +KT  G+   +  L   +I A C   ++ +
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFC-RMNKT--GF-EADMRLNNILIAAFCRQKKMKE 539

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           + +LF  + S  L P   TYT+M+ G  +       +    +M + G VPD+     ++ 
Sbjct: 540 SERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLIS 599

Query: 552 G 552
           G
Sbjct: 600 G 600



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 5/397 (1%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EA  M   M+  G+ P+  T N +++   +   ++ A   + EM    + P+  +F 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++ G  + G+++ A  +   M + G  P+      ++   C+ G +  A+    +M   
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P++  +  LI GLC  G ++ A  +L++M + G   NV T+ +LIDG CK G  EKA
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364

Query: 349 LSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
             +  ++    + +PNV T++S+I G CK   ++ A  L++ M  + L P+V  +T LI+
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K GN      L   M +    P+++T +++I  L K  R   A     E  +K    
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY----ELLNKAFSC 480

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               + V Y  +IQ  C    I +A   F  M       D      ++    R K+M + 
Sbjct: 481 GLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 540

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             L   ++ +G+VP       M+ GY + GD   A +
Sbjct: 541 ERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALK 577



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++  + ++  +N A+    +M +  L P+ +T   +++   + G +  A N F  M+  G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V P+   +  ++ G  + G + EA    S M +    PD  T  +++  LC  G +  A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
              +KM   G   N++ + SLIDG CK+G +++A  +  +M   G +PNV T ++LIDG 
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 375 CKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G  + A  L+ ++V   +  P+V  +T++I G  K+  +     L+  M E  + P+
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T ++LI+G  K G    A     E  +  D     PN   Y A+I +LC   +  +A 
Sbjct: 416 VNTYTTLINGHCKAGNFDRA----YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY 471

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L +   S  L  D  TYT +++   +   +   +     M K G   D  +N +++  +
Sbjct: 472 ELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAF 531

Query: 554 QENGDLKSAFR 564
                +K + R
Sbjct: 532 CRQKKMKESER 542



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 5/346 (1%)

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           NLQ        ++    ++G L  A    + M   G+ P+    NC+++   ++G +  A
Sbjct: 165 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYA 224

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            ++  EM    + PD  ++ +++ G    G+++ A+  L  M + G + +  T   ++  
Sbjct: 225 ENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSA 284

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C+ G + +A+    +M + G +PN++ F+SLIDG CK G+I  A  +  EMV     P+
Sbjct: 285 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 344

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFF 457
           V   TALIDGL K G  ++  RL+ +++ + I  P+V T +S+I G  K  +++ A   F
Sbjct: 345 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLF 404

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                K  G +  PN   Y  +I   C  G   +A +L + M  +  RP+  TY  ++  
Sbjct: 405 SRM--KEQGLF--PNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDS 460

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L +  R  +   LL      G+  D V   ++++   +  D+K A 
Sbjct: 461 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 217/404 (53%), Gaps = 5/404 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D++ +F   M+L      +V +G ++           A++L  +M  KGIEP +V   IL
Sbjct: 35  DAISQF-NGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+  C+  +M  + S+   + + G  PN  T   LM G C   +V +++ F+ +++    
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
           Q N V++G L++GLCK+GE R A  F   +       N+ +YN +IDG CK   + EA  
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYD 213

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             SEM    I P+V TY  LI G C  GQL GA  LL +M  + I  NV TY  LID  C
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           KEG +++A ++ ++M  +G   +VVT++SL+DG CK  N+D A  L+ +M    + P+  
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            +TALIDGL K G +K+  +L++++L       V T + +I GL K G +  AL     K
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAI---K 390

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           +   D G C PN V +  II++L    +  KA KL  +M +  L
Sbjct: 391 SKMEDNG-CIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 203/365 (55%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P I     +L  L K   + +     ++M + G+  ++VT  +LI+C C  G +  + ++
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             +++  G +P  +  T L+ GLC + ++ ++      +   G   N  +Y  L++G CK
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + +   A++F   +   +   NVV +  ++DGLCK   +  A +F+  M   G+FPN+  
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  LI G C AG L  A SL +EM    I+P+V+TY ILI  LC  G+++ A+ LL +M+
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMH 289

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G  A+VVTY SL+DG+CK  +++KA ++  +M E G++PN  T+++LIDG CK G + 
Sbjct: 290 YRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLK 349

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  L+ ++++K    DV  +  +I GL K+G + E L +  +M +    P+V T   +I
Sbjct: 350 DAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409

Query: 442 HGLFK 446
             LFK
Sbjct: 410 RSLFK 414



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 44  SLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKG 98
            +E+    P++   + LI  F  +G +  +  V  KI  L   P       L+ GL  KG
Sbjct: 77  QMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKG 136

Query: 99  KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
           +      F++++V  G   + V+YG L++  C  G+   A+     + D      VV+Y 
Sbjct: 137 EVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYN 196

Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
            +I GLC +  + EA   +  M   G+ PN+ TY  L+ G+C    +  A    +EM+  
Sbjct: 197 TIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILK 256

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           N+ PNV T+ +L+D LCK G+++ A N    M   G   ++  Y  L+DG CK  NL +A
Sbjct: 257 NINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKA 316

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            +L  +M+++ I P+ +TY  LI GLC  G+L+ A+ L Q +  +G   +V TYN +I G
Sbjct: 317 TALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGG 376

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
            CKEG +++AL++ S+M + G  PNVVTF  +I    K    D A  L  EM+ K L+
Sbjct: 377 LCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 203/425 (47%), Gaps = 12/425 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A++ F+ M+     P +V +  ++  L        A S+ + M   G+ PNL T N L++
Sbjct: 36  AISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILIN 95

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C +  ++ +     ++L    QPN +T   LM GLC  GE++ + +F   +   G   
Sbjct: 96  CFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQM 155

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   Y  L++G CK G    A+     +E      +V  YN +I GLC    +  A    
Sbjct: 156 NQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFY 215

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
            +M   GI  NV+TY +LI G+C  G +  A S+ ++M  K + PNV T++ LID  CK 
Sbjct: 216 SEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKE 275

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +  A  L  EM  +    DVV +T+L+DG  K+ N+ +   L+ +M E  I P+ +T 
Sbjct: 276 GKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTY 335

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           ++LI GL K GR+ +A   F +   K     C  +   Y  +I  LC +G + +A  + S
Sbjct: 336 TALIDGLCKGGRLKDAQKLFQDLLVKG----CCIDVCTYNVMIGGLCKEGMLDEALAIKS 391

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M  +   P+  T+  ++R L +         LL +MI  G+        +  R + E  
Sbjct: 392 KMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL--------LRFRNFHEIE 443

Query: 558 DLKSA 562
           DLK  
Sbjct: 444 DLKPT 448



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 187/375 (49%), Gaps = 3/375 (0%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F  ++   ++M H   A+ + +++EV    P +   N L+N     G+    +    +++
Sbjct: 55  FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKIL 114

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   + +T   L+   C +G+V K+++  D+++ +G +   V Y  L++GLC   +  
Sbjct: 115 KLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 174

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A    R + +     N+  YN ++DG CK   VN A +FY EM    + PNV+T+  L+
Sbjct: 175 CAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLI 234

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G C  G+L  A +    M    + PN++ Y  LID  CK G + EA +L +EM      
Sbjct: 235 GGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQP 294

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            DV TY  L+ G C    L+ A  L  KM + GI  N  TY +LIDG CK G ++ A  +
Sbjct: 295 ADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKL 354

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              +  KG   +V T++ +I G CK G +D A+ + ++M     +P+VV F  +I  L K
Sbjct: 355 FQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFK 414

Query: 412 DGNMKETLRLYKEML 426
                +  +L  EM+
Sbjct: 415 KDENDKAEKLLHEMI 429



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 4/385 (1%)

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           +N + +A S F  M      P +  +  ++    K+   + A+    +M    ++PN+VT
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
             +L++  C +G++  + +    + K G  PN      L+ G C  G + +++    ++ 
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
                 +  +Y  L+ GLC +G+   A   L+ +       NVV YN++IDG CK+  + 
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           +A    S+M  +G+ PNV+T+++LI G C AG +  A  L  EM++K++ P+V  +  LI
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           D L K+G +KE   L  EM        V T +SL+ G  KN  +  A   F++  +    
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG-- 327

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               PN   Y A+I  LC  G++  A KLF D+       D CTY  M+ GL +   + +
Sbjct: 328 --IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDE 385

Query: 527 VMMLLADMIKMGIVPDAVINQVMVR 551
            + + + M   G +P+ V  ++++R
Sbjct: 386 ALAIKSKMEDNGCIPNVVTFEIIIR 410



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 4/359 (1%)

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V+ A+  ++ ML  +  P +V FG ++  L K+     A +    M   G+ PN+   N 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+  C  G +  + S+  ++ K    P+  T   L+KGLC  G+++ +     K+  +G
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              N V+Y +L++G CK G+   A+     + +     NVV ++++IDG CK   ++ A 
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
             Y+EM  + + P+V+ +T LI G    G +     L  EM+   I P+V+T + LI  L
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            K G++  A N   E   +        + V Y +++   C +  + KA+ LF  M+   +
Sbjct: 273 CKEGKVKEAKNLLAEMHYRGQ----PADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI 328

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           +P+  TYT ++ GL +  R+ D   L  D++  G   D     VM+ G  + G L  A 
Sbjct: 329 QPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 191/357 (53%), Gaps = 4/357 (1%)

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  ++ R+  FY E+L     PN   F VLM G CKVG + +A   F  + K G+ P + 
Sbjct: 119 RPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVV 178

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N LI G CKAG + E   L   ME   + PDVFT++ LI GLC  G+L+    L  +M
Sbjct: 179 SFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G++ N VT+  LIDG CK G ++ AL     M  +GV P++VT+++LI+G CK G++
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L  EM    L PD + FT LIDG  K G+M+  L + + M+E  I       + L
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL ++GR+ +A        D    G+  P+   Y  ++   C  G +    KL  +M+
Sbjct: 359 ISGLCRDGRVHDAERML---RDMLSAGF-KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQ 414

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           SD   P   TY  ++ GL +  ++ +  MLL  M+ +G+ P+ +   +++ G+ ++G
Sbjct: 415 SDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 211/436 (48%), Gaps = 18/436 (4%)

Query: 30  KPHHVCYSVFNALNSLE---------------IPKFNPSVFSTLIIAFSEMGHIEEALWV 74
           K H++   +F A+N  E               +P   P   S LI            L  
Sbjct: 37  KDHNLLCEIFEAINDSENEKDYYSKNPRLKQILPYLKPRHVSNLITLNPLSLSPSSFLSF 96

Query: 75  YRKIEVLPAIQACNALLNGLIK--KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQ 132
           +  +  +P +Q C  LL  +++    + +  W FY E++  G   +   + VL+   C  
Sbjct: 97  FNHLFPVP-VQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKV 155

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           G V  A  +FDE+  +G+ PTVV +  LI G C    + E   +   M    V P+++T+
Sbjct: 156 GGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTF 215

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           +AL++G CK   ++     + EM    L PN VTF VL+DG CK G++  A   F  M  
Sbjct: 216 SALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLA 275

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            GV P++  YN LI+G CK G+L EA  L +EM    + PD  T+  LI G C  G +E 
Sbjct: 276 QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMES 335

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  + ++M +EGI  + V +  LI G C++G +  A  +   M   G +P+  T++ ++D
Sbjct: 336 ALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVD 395

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
             CK GN+     L  EM     VP VV + AL++GL K G +K    L   ML   + P
Sbjct: 396 CFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAP 455

Query: 433 SVFTVSSLIHGLFKNG 448
           +  T + L+ G  K+G
Sbjct: 456 NDITYNILLEGHSKHG 471



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 188/346 (54%), Gaps = 4/346 (1%)

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G  PN + +N LM G+CKV  V  A   + E+    L+P VV+F  L+ G CK G + 
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
                   M    V P++F ++ LI+G CK G L E   L  EM    + P+  T+ +LI
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G C  G+++ A    Q M  +G+  ++VTYN+LI+G CK GD+++A  + ++M+  G+ 
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ +TF++LIDG CK G++++A+ +   MV + +  D V FT LI GL +DG + +  R+
Sbjct: 315 PDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERM 374

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
            ++ML A   P   T + ++    K G +   + F L K  ++DG    P  V Y A++ 
Sbjct: 375 LRDMLSAGFKPDDPTYTMVVDCFCKKGNV--XMGFKLLKEMQSDGHV--PGVVTYNALMN 430

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            LC  GQ+  A  L   M +  + P++ TY  +L G  +    +DV
Sbjct: 431 GLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 167/320 (52%)

Query: 134 DVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYN 193
           ++ ++   + E++D G  P    + +L+HG C    +  A  +F  + + G+ P + ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
            L+ G CK   V         M    + P+V TF  L++GLCK G L      F  M   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           G+ PN   +  LIDG CK G +  A+     M    + PD+ TYN LI GLC VG L+ A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
             L+ +M   G+  + +T+ +LIDG CK GDME AL +  +M E+G+E + V F+ LI G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C+ G +  A  +  +M+     PD   +T ++D   K GN+    +L KEM      P 
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 434 VFTVSSLIHGLFKNGRISNA 453
           V T ++L++GL K G++ NA
Sbjct: 422 VVTYNALMNGLCKQGQVKNA 441



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 70  EALWVYRKIEVL-----PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           E  W +  +EVL     P     N L++G  K G   S    ++E+   GL   VV++  
Sbjct: 124 ERSWAFY-LEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI  CC  G V +   L   M  + + P V  ++ LI+GLC E ++ E   +F  M   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
           +VPN  T+  L+DG CK   V+ AL+ +  ML   ++P++VT+  L++GLCKVG+L+ A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
                M+  G+ P+   +  LIDG CK G++  A+ +   M +  I  D   + +LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C  G++  AE +L+ M   G   +  TY  ++D +CK+G++     +  +M   G  P V
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           VT+++L++G CK G +  A  L   M+   + P+ + +  L++G SK G+
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 188/360 (52%), Gaps = 6/360 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           F+ L+  F ++G +  A  V+ +I    + P + + N L++G  K G  +  +     M 
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
              +  DV T+  LI+  C +G + +   LFDEM  KG+ P  V +T+LI G C   K+ 
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A   F+ M   GV P+L TYNAL++G CKV D+  A    +EM    L+P+ +TF  L+
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG CK G++ +A      M + G+  +   +  LI G C+ G + +A  +  +M      
Sbjct: 325 DGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFK 384

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD  TY +++   C  G +     LL++M  +G +  VVTYN+L++G CK+G ++ A  +
Sbjct: 385 PDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKML 444

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   GV PN +T++ L++G  K G+        +E   K LV D   +TAL++  SK
Sbjct: 445 LDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKDYASYTALVNESSK 501



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 172/324 (53%), Gaps = 4/324 (1%)

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
           EL  +  F++ +   G  PN F +N L+ G CK G +  A  +  E+ K  + P V ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G +E    L   M  E +  +V T+++LI+G CKEG +++   +  +M  K
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN VTF+ LIDGQCK G +D A+  +  M+ + + PD+V + ALI+GL K G++KE 
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
            RL  EM  + + P   T ++LI G  K G + +AL     K    + G    + V +  
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEI---KRRMVEEGI-ELDDVAFTV 357

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC DG++  A ++  DM S   +PD+ TYT ++    +   +     LL +M   G
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417

Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
            VP  V    ++ G  + G +K+A
Sbjct: 418 HVPGVVTYNALMNGLCKQGQVKNA 441



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 150/291 (51%), Gaps = 12/291 (4%)

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+ F +N+L+ G C VG +  A  +  ++ K G+   VV++N+LI G CK G +E+   +
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  + V P+V TFS+LI+G CK G +D    L+ EM  K LVP+ V FT LIDG  K
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G +   L+ ++ ML   + P + T ++LI+GL K G +  A     E +         P
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS----ASGLRP 315

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + + +  +I   C  G +  A ++   M  + +  D+  +T ++ GL R  R+ D   +L
Sbjct: 316 DRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERML 375

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGH 582
            DM+  G  PD     ++V  + + G++   F+    LKE      +++GH
Sbjct: 376 RDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFK---LLKE-----MQSDGH 418



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 132/256 (51%), Gaps = 4/256 (1%)

Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
           +LE +     ++   G   N   +N L+ G+CK G +  A  V  ++ ++G+ P VV+F+
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
           +LI G CKAG ++    L   M  + + PDV  F+ALI+GL K+G + E   L+ EM   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 429 KITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ 488
            + P+  T + LI G  K G++  AL  F     +       P+ V Y A+I  LC  G 
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQG----VRPDLVTYNALINGLCKVGD 297

Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           + +A +L ++M +  LRPD  T+TT++ G  +   M   + +   M++ GI  D V   V
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 549 MVRGYQENGDLKSAFR 564
           ++ G   +G +  A R
Sbjct: 358 LISGLCRDGRVHDAER 373



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 4/231 (1%)

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           ++E++ +   ++ + G  PN   F+ L+ G CK G + +A  ++ E+  + L P VV F 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
            LI G  K G ++E  RL   M   ++ P VFT S+LI+GL K GR+      F    D+
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLF----DE 237

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
             G    PN V +  +I   C  G++  A K F  M +  +RPD  TY  ++ GL +   
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           + +   L+ +M   G+ PD +    ++ G  + GD++SA      + E  I
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGI 348


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 230/468 (49%), Gaps = 7/468 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P + AC AL+    K G+  +       +   G V D  +Y VLI+  C  G++ +AL 
Sbjct: 101 IPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALR 160

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           + D      + P    Y  ++  LC+  K+ +A  +     +    P++ T   L+D  C
Sbjct: 161 VLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATC 217

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K + V +A++ ++EM     +P+VVT+ VL+ G CK G L  A  F   +  +G   ++ 
Sbjct: 218 KESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVI 277

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            +N ++   C  G   +AM L + M +    P V T+NILI  LC  G L  A  +L+ M
Sbjct: 278 SHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMM 337

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K G   N  ++N LI G+C    +++A+     M  +G  P++VT++ L+   CK G +
Sbjct: 338 PKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKV 397

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ + +++  K   P ++ +  +IDGL K G  +  + L +EM    + P + T +S+
Sbjct: 398 DDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 457

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           + GL + G++  A+ FF        G    PN  +Y +I+  LC   Q   A     DM 
Sbjct: 458 VGGLSREGKVHEAIKFF----HYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMV 513

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
           ++  +P   +YTT+++G+       +   L  ++   G+V  ++I +V
Sbjct: 514 ANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKV 561



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 247/488 (50%), Gaps = 24/488 (4%)

Query: 32  HHVCYSVFNA------------LNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE 79
           HH+C  + N              N  +IP  +    + LI  F ++G  + A  +   +E
Sbjct: 74  HHLCRLIRNGELEEGSRFLEYMTNKGKIP--DVVACTALIREFCKIGRTKNATRIMGILE 131

Query: 80  VLPAI---QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
              A+    + N L+N   K G+ +      +      +  +  TY  ++   C +G + 
Sbjct: 132 ESGAVIDANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLK 188

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           +A+ + D  +     P VV  T+LI   C E+ + +A  +F  MR  G  P++ TYN L+
Sbjct: 189 QAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLI 248

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G+CK   ++ A+ F  ++  +  Q +V++  +++  LC  G    A      M + G F
Sbjct: 249 KGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF 308

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  +N LI+  C+ G L +A+++   M K   +P+  ++N LI+G C    ++ A   
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L+ M   G   ++VTYN L+   CK+G ++ A+ + SQ++ KG  P++++++++IDG  K
Sbjct: 369 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 428

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G  + A+ L  EM  K L PD++  T+++ GLS++G + E ++ +  +    I P+ F 
Sbjct: 429 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFI 488

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +S++ GL K  + S A++F +   D    G C P    Y  +I+ + Y+G   +ASKL 
Sbjct: 489 YNSIMMGLCKAQQTSLAIDFLV---DMVANG-CKPTEASYTTLIKGITYEGLAEEASKLS 544

Query: 497 SDMRSDNL 504
           +++ S  L
Sbjct: 545 NELYSRGL 552



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 226/476 (47%), Gaps = 7/476 (1%)

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
           LI+ G+ +    F E M   G + DVV    LI   C  G    A  +   + + G    
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
              Y +LI+  C   ++ EA    R +    V PN  TY+A++   C    + +A++   
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
             L     P+VVT  VL+D  CK   +  A   F  M   G  P++  YN LI G CK G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            L EA+    ++  +    DV ++N++++ LC  G+   A  LL  M ++G   +VVT+N
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            LI+  C++G + KAL+V   M + G  PN  +F+ LI G C    ID A+     MV +
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              PD+V +  L+  L KDG + + + +  ++     +PS+ + +++I GL K G+   A
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
           +    E   K       P+ +   +++  L  +G++ +A K F  ++   ++P+   Y +
Sbjct: 436 VELLEEMCYKG----LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNS 491

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFL 569
           ++ GL +A++    +  L DM+  G  P       +++G    G  + A + S  L
Sbjct: 492 IMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 188/416 (45%), Gaps = 16/416 (3%)

Query: 161 IHGLCN---ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH 217
           IH LC      ++ E       M   G +P++    AL+  +CK+     A      +  
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE 277
                +  ++ VL++  CK GE+  A     H +   V PN   Y+ ++   C  G L +
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQ 189

Query: 278 AMSLCSEMEKFEISPDVFTYNILIKGLC---GVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           AM +     + +  PDV T  +LI   C   GVGQ   A  L  +M  +G   +VVTYN 
Sbjct: 190 AMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQ---AMKLFNEMRGKGCKPDVVTYNV 246

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI G+CKEG +++A+    ++   G + +V++ + ++   C  G    AM L   M+ K 
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             P VV F  LI+ L + G + + L + + M +   TP+  + + LI G      I  A+
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAI 366

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
                   +     C P+ V Y  ++ ALC DG++  A  + S + S    P   +Y T+
Sbjct: 367 EHLEIMVSRG----CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 422

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + GLL+  +    + LL +M   G+ PD +    +V G    G +  A +   +LK
Sbjct: 423 IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLK 478


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 224/447 (50%), Gaps = 44/447 (9%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 25  MIHFLCTHQMLSEAKSLIQVVV-----SRKGKGSASAVFAAILETRGTQRSDIYVFSGLI 79

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +    I  C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 139

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C +  +  A+S+
Sbjct: 140 A-----------------------------------SLYFFNILMHRFCKDGDIRLAQSV 164

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ +YN LM+GY ++ D++        ML   +QP+V T+ VL++GLCK
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+ T
Sbjct: 225 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 284

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  + +TY +LIDG CKEGD++ A     +M 
Sbjct: 285 YNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 344

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD   +T +I+   K G++ 
Sbjct: 345 QENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHG 443
           +  +L KEM      PSV T + L++G
Sbjct: 405 KGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 4/364 (1%)

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           + +++ LI        + +A   +R  RE      + T   +++   K+        FY 
Sbjct: 72  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYE 131

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L++G+ + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++ N VT+ 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L  EM +K
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L PD + +T LIDG  K+G++       K M++  I       ++LI GL + GR  +A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
                E           P+   Y  II   C  G + K SKL  +M+ D   P   TY  
Sbjct: 372 EKMLREMLSVG----LKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427

Query: 514 MLRG 517
           ++ G
Sbjct: 428 LMNG 431



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 204/418 (48%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSG 77

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H     + T   +++ L K+   +    F+  + + G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G + +A     E   +        + V Y A+I  LC +G+ + A K
Sbjct: 318 ITYTTLIDGCCKEGDLDSA----FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNG 247

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD +    ++ G  + GDL SAF
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 276/611 (45%), Gaps = 85/611 (13%)

Query: 19  KDVTENLLK----SRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEAL 72
           +DV   LLK    +R P+   + VF  +    +   +P++  F+TL+ AF E      A 
Sbjct: 77  EDVPLTLLKAYAKTRMPNEALH-VFQTMP--HVFGCSPTIRSFNTLLNAFVESHQWARAE 133

Query: 73  WVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
             ++  E   V P ++  N L+  + KKG+F+        M   G+  D +TYG LI   
Sbjct: 134 NFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGV 193

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF-RSMRECGVVPN 188
              GD+  AL +FDEM ++G+EP VV Y ++I G       V+A  M+ R +RE  V P+
Sbjct: 194 AKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS 253

Query: 189 LYTYNALMDGYCK-----------------------------------VADVNRALEFYH 213
           + +YN ++ G CK                                     D+  A + Y 
Sbjct: 254 VVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYE 313

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF-------------GVFPNIF 260
           EM+   ++P+VVT   +++GLCK G +      +  M K              G+F N  
Sbjct: 314 EMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGK 373

Query: 261 V-----------------YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV--FTYNILI 301
           V                 Y  ++ G C  G +  A+ +  E E  E   DV  F Y+ LI
Sbjct: 374 VDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLI 433

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             LC  G+L+ A+G+++ M K G   N    N LIDG+ K   ++ A+ V  +M+ KG  
Sbjct: 434 NALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCS 493

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
             VV+++ LI+G  +A     A     EM+ K   PD++ ++ LI GL +   M   LRL
Sbjct: 494 LTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRL 553

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
           + + L+    P +   + +IH L  +G++ +AL  +     K        N V +  I++
Sbjct: 554 WHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKK-----CVNLVTHNTIME 608

Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
                G    ASK+++ +  D L+PD  +Y   L+GL    R+ D +  L D +  G +P
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLP 668

Query: 542 DAVINQVMVRG 552
            A+   ++VR 
Sbjct: 669 TAITWNILVRA 679



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 225/465 (48%), Gaps = 44/465 (9%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
           +AL++F  M    G  PT+  +  L++     ++   AE+ F+      V PN+ TYN L
Sbjct: 95  EALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVL 154

Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
           M   CK  +  +       M    + P+ +T+G L+ G+ K G+L  A   F  M + GV
Sbjct: 155 MKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGV 214

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAE 314
            P++  YN +IDG  K G+  +A  +   + + E + P V +YN++I GLC  G+     
Sbjct: 215 EPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGL 274

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            + ++M K     ++ TY++LI G  + GD+  A  V  +M  +GV P+VVT +++++G 
Sbjct: 275 EIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGL 334

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CKAGN++    L+ EM   SL  +V  +   + GL ++G + + + L+  +LEA      
Sbjct: 335 CKAGNVEECFELWEEMGKCSL-RNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSA--- 390

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS- 493
            T   ++HGL  NG ++ AL   LE+ +  +GG    +   Y+++I ALC +G++ +A  
Sbjct: 391 -TYGVVVHGLCWNGYVNRALQ-VLEEAEHREGGM-DVDEFAYSSLINALCKEGRLDEADG 447

Query: 494 ----------------------------------KLFSDMRSDNLRPDNCTYTTMLRGLL 519
                                             K+F +M          +Y  ++ GLL
Sbjct: 448 VVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLL 507

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           RA+R  +    + +M++ G  PD +    ++ G  E+  + +A R
Sbjct: 508 RAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALR 552



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 10/316 (3%)

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
           FG  P I  +N L++   ++     A +     E   +SP+V TYN+L+K +C  G+ E 
Sbjct: 107 FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEK 166

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
             GLL  M+  G+  + +TY +LI G  K GD+  AL V  +M E+GVEP+VV ++ +ID
Sbjct: 167 GRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIID 226

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           G  K G+   A  ++  ++ + LV P VV +  +I GL K G   E L +++ M + +  
Sbjct: 227 GFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERK 286

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
             +FT S+LIHGL + G +  A   + E      G    P+ V   A++  LC  G + +
Sbjct: 287 CDLFTYSALIHGLSEAGDLGGARKVYEEMV----GRGVRPDVVTCNAMLNGLCKAGNVEE 342

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
             +L+ +M   +LR +  +Y   L+GL    ++ D MML   +++     D+    V+V 
Sbjct: 343 CFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVH 397

Query: 552 GYQENGDLKSAFRCSE 567
           G   NG +  A +  E
Sbjct: 398 GLCWNGYVNRALQVLE 413



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 186/396 (46%), Gaps = 11/396 (2%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S LI   SE G +  A  VY ++    V P +  CNA+LNGL K G  +  +E +EEM
Sbjct: 291 TYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM 350

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
             C L  +V +Y + +      G V  A+ L+D ++    E     Y +++HGLC    +
Sbjct: 351 GKCSL-RNVRSYNIFLKGLFENGKVDDAMMLWDGLL----EADSATYGVVVHGLCWNGYV 405

Query: 171 VEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
             A  +      RE G+  + + Y++L++  CK   ++ A      M     + N     
Sbjct: 406 NRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCN 465

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           VL+DG  K  +L +A   F  M+  G    +  YN LI+G  +A    EA    +EM + 
Sbjct: 466 VLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEK 525

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              PD+ TY+ LI GL     ++ A  L  +    G   +++ YN +I   C  G +E A
Sbjct: 526 GWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDA 585

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           L + S + +K    N+VT +++++G  K GN + A  ++  ++   L PD++ +   + G
Sbjct: 586 LQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKG 644

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           L   G + + +    + L     P+  T + L+  +
Sbjct: 645 LCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 252/517 (48%), Gaps = 11/517 (2%)

Query: 68  IEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           ++ AL  Y K+   +  P ++  N L + + K   + +     + M   G+   V T  +
Sbjct: 64  VDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNI 123

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           +I+C C     +   ++   M   G+EP++V +  +++GLC E  + +A      +++ G
Sbjct: 124 VINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMG 183

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
              + YT  A+ +G CKV   + AL +  +M   N   +V  +  ++DGLCK G +  A 
Sbjct: 184 YESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEAL 243

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
           N F  M   G+ P++F YNCLI G C      EA  L + M +  I PDV T+N++    
Sbjct: 244 NLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 303

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
              G +  A+ +   M   GI  +VVTY S+I  +C    M+ A+ V   M  KG  PN+
Sbjct: 304 FKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNI 363

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           VT++SLI G C+  N++ AM    EMV   L P+VV ++ LI G+ K G       L+  
Sbjct: 364 VTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLV 423

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQA 482
           M +    P++ T + ++ GLFK    S A++ F  LEK +         N ++Y  I+  
Sbjct: 424 MHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN------WDLNIIIYNIILDG 477

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +C  G++  A +LFS + S  ++ D  TY  M++GL +   + D   LL  M + G  P+
Sbjct: 478 MCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPN 537

Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
                V V+G      +  + +   F+K+    +  T
Sbjct: 538 ECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADAT 574



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 236/481 (49%), Gaps = 20/481 (4%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV------ 54
           +F ++A  K Y  A  LIK ++   +  +   H    V N L  L    F  SV      
Sbjct: 89  LFSIVAKMKHYTTAISLIKHMS--YIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFK 146

Query: 55  ---------FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
                    F+T++      G++ +A+     ++ +        C A+ NGL K G   +
Sbjct: 147 IGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSA 206

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
              + ++M       DV  Y  ++D  C  G V +ALNLF +M  KGI+P +  Y  LIH
Sbjct: 207 ALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIH 266

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
           GLCN ++  EA  +  +M   G++P++ T+N +   + K   ++RA   +  M+H  ++ 
Sbjct: 267 GLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEH 326

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +VVT+  ++   C + +++ A   F  M   G  PNI  Y  LI G C+  N+ +AM   
Sbjct: 327 DVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFL 386

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM    + P+V T++ LI G+C  G+   A+ L   M+K G L N+ T   ++DG  K 
Sbjct: 387 GEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKC 446

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
               +A+S+  ++ +   + N++ ++ ++DG C +G ++ A+ L++ +  K +  DVV +
Sbjct: 447 NFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTY 506

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             +I GL K+G + +   L  +M E    P+  T +  + GL +  +IS +  + +   D
Sbjct: 507 NIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKD 566

Query: 463 K 463
           K
Sbjct: 567 K 567



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           + +S ++    + G + EAL ++ ++    + P +   N L++GL    ++         
Sbjct: 224 TAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLAN 283

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M+  G++ DV T+ V+       G + +A ++F  M+  GIE  VV YT +I   C  N+
Sbjct: 284 MMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQ 343

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           M +A  +F  M   G +PN+ TY +L+ G+C+  ++N+A+ F  EM+++ L PNVVT+  
Sbjct: 344 MKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWST 403

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+ G+CK G+  AA   F+ M K G  PN+     ++DG  K     EAMSL  E+EK  
Sbjct: 404 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 463

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              ++  YNI++ G+C  G+L  A  L   +  +G+  +VVTYN +I G CKEG ++ A 
Sbjct: 464 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAE 523

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  +M E G  PN  T++  + G  +   I  +      M  K    D      LI+  
Sbjct: 524 DLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYF 583

Query: 410 SKD 412
           S +
Sbjct: 584 SAN 586



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            +D       V+ AL+FYH+M+     P V  F +L   + K+     A +   HM+  G
Sbjct: 54  FLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIG 113

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V P +   N +I+  C+  +     S+   M K  + P + T+N ++ GLC  G +  A 
Sbjct: 114 VKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAI 173

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
             +  +   G  ++  T  ++ +G CK G    ALS   +M EK    +V  +S ++DG 
Sbjct: 174 RFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGL 233

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +  A+ L+++M  K + PD+  +  LI GL      KE   L   M+   I P V
Sbjct: 234 CKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 293

Query: 435 FTVSSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            T + +    FK G IS A    +F +    + D        V Y +II A C   Q+  
Sbjct: 294 QTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDV-------VTYTSIIGAHCMLNQMKD 346

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A ++F  M S    P+  TYT+++ G    K M   M  L +M+  G+ P+ V    ++ 
Sbjct: 347 AMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIG 406

Query: 552 GYQENG 557
           G  + G
Sbjct: 407 GVCKAG 412


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 218/440 (49%), Gaps = 44/440 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 19  MIHFLCTHQMFLEAKSLIQTVV-----SRKGKDSASAVFAAILETKGTQRSDIYVFSGLI 73

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G I +A+  +R   K         C  +L  L+K   F  VW FY+E++ CG  
Sbjct: 74  TAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYP 133

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C E +M  A+S+
Sbjct: 134 A-----------------------------------SLYFFNILMHRFCKEGEMRLAQSV 158

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ ++N LM+GY K+ D++      + M    +QP+V T+ VL++GLCK
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCK 218

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
              +  A   F  M   G+ PN   +  LIDGHCK G L  AM +  +M     SPDV T
Sbjct: 219 ESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVT 278

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  LL +M ++G+  + +TY +LIDG CKEGD+E A  +  +M 
Sbjct: 279 YNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMI 338

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD   +T +++   K G++K
Sbjct: 339 KESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVK 398

Query: 417 ETLRLYKEMLEAKITPSVFT 436
           +   L +EM      P V T
Sbjct: 399 KASELLREMQRNGRVPCVVT 418



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 163/296 (55%), Gaps = 4/296 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY E+L      ++  F +LM   CK GE+R A + F  + K+G+ P++  +N L++G+ 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G+L E   L + M    + PDV+TY++LI GLC   +++ A GL  +M   G++ N V
Sbjct: 183 KLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGV 242

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LIDG+CK G ++ A+ +  QM  +G  P+VVT+++LI G CK G++  A  L  EM
Sbjct: 243 TFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEM 302

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             K L PD + +T LIDG  K+G+++    L + M++  I       ++LI GL + GR 
Sbjct: 303 SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRA 362

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            +A     E           P+   Y  I+   C  G + KAS+L  +M+ +   P
Sbjct: 363 VDAEKMLREMLRVG----LKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 162/283 (57%)

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           ++ + ECG   +LY +N LM  +CK  ++  A   +  +    L+P+VV+F  LM+G  K
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           +G+L         M   GV P+++ Y+ LI+G CK   + EA  L  EM    + P+  T
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           +  LI G C  G+L+ A  + ++M  +G   +VVTYN+LI G CK+GD+++A  +  +M+
Sbjct: 244 FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMS 303

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
            KG++P+ +T+++LIDG CK G+++ A  L   M+ +S+  D VV+TALI GL ++G   
Sbjct: 304 RKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAV 363

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           +  ++ +EML   + P   T + +++   K G +  A     E
Sbjct: 364 DAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLRE 406



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 199/410 (48%), Gaps = 22/410 (5%)

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSM------------------RECGVVPNLYT 191
           +  T+  Y  +IH LC     +EA+S+ +++                   +     ++Y 
Sbjct: 9   VRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYV 68

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
           ++ L+  Y +   +  A+E +     H+ +    T   +++ L K    +    F+  + 
Sbjct: 69  FSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEIL 128

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G   +++ +N L+   CK G +  A S+   + K+ + P V ++N L+ G   +G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
               L   M   G+  +V TY+ LI+G CKE  M++A  +  +M + G+ PN VTF++LI
Sbjct: 189 EGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           DG CK G +D AM +Y +M+ +   PDVV +  LI GL K G++K+   L  EM    + 
Sbjct: 249 DGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLK 308

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
           P   T ++LI G  K G +  A     E  ++        + V+Y A+I  LC +G+ + 
Sbjct: 309 PDKITYTTLIDGSCKEGDLETA----FELRERMIKESIRLDDVVYTALIFGLCQEGRAVD 364

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
           A K+  +M    L+PD+ TYT ++    +   +     LL +M + G VP
Sbjct: 365 AEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 5/220 (2%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G +  A  ++  +    L P VV F  L++G  K G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K  R+  A   F E  D        PN 
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNG----LVPNG 241

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A  ++  M +    PD  TY T++ GL +   +     LL +
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE-FLKES 572
           M + G+ PD +    ++ G  + GDL++AF   E  +KES
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKES 341


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 245/507 (48%), Gaps = 16/507 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           N   ++TLI  +   G + +AL +   + V P     N +L GL    +++       EM
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V      + VT+   I   C  G + +A+ L D M   G  P VVIY+ L++G   + ++
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +A  +   M      PN   YNA + G C         +   EM+  +  PN  TF +L
Sbjct: 299 DDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
              LC+ G +  A      M K+G  P+  +YN LI    + G + +A+ L + M     
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---C 412

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           SPDV ++N  +KGLC   + + AE L+ +M +E      +T+N LID  C+ G +  A+ 
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V  QM + G  P++VT+SSLI+G  + G +++A+ L+  M  K   PD+  + A++ GL 
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLC 529

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           +    ++   L   M      P+  T + LI+ L + G +  A+  F E+  K      +
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVF-EQMPKYGS---T 585

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y A+I      G++  A +L S M   + +PD  +Y + L+GL RA+R  +   +
Sbjct: 586 PDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEV 642

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENG 557
           +A+M++M   P+ V  +   R +  NG
Sbjct: 643 VAEMLRMKCPPNEVTFKYANRLFVPNG 669



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 222/474 (46%), Gaps = 18/474 (3%)

Query: 84  IQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFD 143
           + ACN L+  L  + +        + +   G  AD V++  L+   C  G +  A  L  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAG-AADPVSHNTLVAGYCRDGRLADAERLLA 170

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
                G    VV YT LI+G C   ++ +A ++  SM    V P+ YTYN ++ G C   
Sbjct: 171 AAGLSGAA-NVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGAR 226

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
               A     EM+ ++  PN VTF   +   C+ G L  A      M ++G  P++ +Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            L++G  + G + +A+ L + M      P+   YN  +KGLC   + E    L+ +M ++
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
             L N  T++ L    C+ G ++ A+ V  QM + G  P+ V +++LI    + G +D A
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L   M      PDV+ F A + GL +     +   L  +ML         T + LI  
Sbjct: 404 LKLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDS 460

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
           L +NGR++NA+  F E+  K     C+P+ V Y+++I  L   G +  A +LF  M    
Sbjct: 461 LCQNGRVNNAIEVF-EQMPKYG---CTPDIVTYSSLINGLSEQGLVESAIELFQSM---P 513

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            +PD   Y  +L+GL RA R  D   L+++M +    P+ +   +++    + G
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKG 567


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 248/520 (47%), Gaps = 10/520 (1%)

Query: 49  KFNP--SVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSV 103
           KF P  S ++TLI AFS + H +  L ++++++ L   P +     L+ G  K+G+ DS 
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
               +EM    L AD+V Y V ID     G V  A   F E+   G++P  V YT +I  
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282

Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           LC  N++ EA  MF  + +   VP  Y YN ++ GY      + A             P+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V+ +  ++  L K+G++  A   F  M K    PN+  YN LID  C+AG L  A  L  
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRD 401

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M+K  + P+V T NI++  LC   +L+ A  + ++M  +    + +T+ SLIDG  K G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++ A  V  +M +     N + ++SLI      G  +    +Y +M+ ++  PD+ +  
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
             +D + K G  ++   +++E+   +  P   + S LIHGL K G  +     F    ++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
                C  +   Y  +I   C  G++ KA +L  +M++    P   TY +++ GL +  R
Sbjct: 582 G----CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           + +  ML  +     I  + VI   ++ G+ + G +  A+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 165/572 (28%), Positives = 254/572 (44%), Gaps = 48/572 (8%)

Query: 54  VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++T+I+ +   G  +EA   L   R    +P++ A N +L  L K GK D   + +EEM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  ++ TY +LID  C  G +  A  L D M   G+ P V    I++  LC   K+
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML-------------- 216
            EA +MF  M      P+  T+ +L+DG  KV  V+ A + Y +ML              
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488

Query: 217 ---------------------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                                + N  P++      MD + K GE       F  +     
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P+   Y+ LI G  KAG   E   L   M++     D   YNI+I G C  G++  A  
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL++M  +G    VVTY S+IDG  K   +++A  +  +   K +E NVV +SSLIDG  
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G ID A  +  E++ K L P++  + +L+D L K   + E L  ++ M E K TP+  
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T   LI+GL K  + + A  F+ E   +       P+ + Y  +I  L   G I +A  L
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQG----MKPSTISYTTMISGLAKAGNIAEAGAL 784

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
           F   +++   PD+  Y  M+ GL    R +D   L  +  + G+        V++    +
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844

Query: 556 NGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
           N  L+ A      L+E+  G +    H  RS+
Sbjct: 845 NDCLEQAAIVGAVLRET--GKAR---HAARSW 871



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 242/537 (45%), Gaps = 38/537 (7%)

Query: 68  IEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLID 127
           IE   W  R+ E+    ++ N+LL  + +   FD++ +   EM + G    V T   ++ 
Sbjct: 82  IEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL 141

Query: 128 CCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP 187
            C     + +  ++   M      P    YT LI      N      ++F+ M+E G  P
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
            ++ +  L+ G+ K   V+ AL    EM   +L  ++V + V +D   KVG++  A  FF
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             +   G+ P+   Y  +I   CKA  L EA+ +   +EK    P  + YN +I G    
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321

Query: 308 GQLEGAEGLLQKMYKEGILANVV----------------------------------TYN 333
           G+ + A  LL++   +G + +V+                                  TYN
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYN 381

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            LID  C+ G ++ A  +   M + G+ PNV T + ++D  CK+  +D A  ++ EM  K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
              PD + F +LIDGL K G + +  ++Y++ML++    +    +SLI   F +GR  + 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
              + +  ++     CSP+  L    +  +   G+  K   +F ++++    PD  +Y+ 
Sbjct: 502 HKIYKDMINQN----CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           ++ GL++A    +   L   M + G V D     +++ G+ + G +  A++  E +K
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 9/484 (1%)

Query: 38  VFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGL 94
           VF  +     P  N S ++ LI      G ++ A  +    +K  + P ++  N +++ L
Sbjct: 365 VFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
            K  K D     +EEM       D +T+  LID     G V  A  ++++M+D       
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           ++YT LI    N  +  +   +++ M      P+L   N  MD   K  +  +    + E
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +      P+  ++ +L+ GL K G        F  M + G   +   YN +IDG CK G 
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + +A  L  EM+     P V TY  +I GL  + +L+ A  L ++   + I  NVV Y+S
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+ K G +++A  +  ++ +KG+ PN+ T++SL+D   KA  I+ A+  +  M    
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             P+ V +  LI+GL K     +    ++EM +  + PS  + +++I GL K G I+ A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F     K +GG   P+   Y A+I+ L    + + A  LF + R   L   N T   +
Sbjct: 783 ALF--DRFKANGGV--PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838

Query: 515 LRGL 518
           L  L
Sbjct: 839 LDTL 842



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 216/452 (47%), Gaps = 6/452 (1%)

Query: 5   LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
           +  A L+ N R  +  + + L KS+K    C ++F  ++  ++   +   F +LI    +
Sbjct: 403 MQKAGLFPNVRT-VNIMVDRLCKSQKLDEAC-AMFEEMD-YKVCTPDEITFCSLIDGLGK 459

Query: 65  MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
           +G +++A  VY K+   +         +L+      G+ +   + Y++M+      D+  
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
               +DC    G+  K   +F+E+  +   P    Y+ILIHGL       E   +F SM+
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           E G V +   YN ++DG+CK   VN+A +   EM     +P VVT+G ++DGL K+  L 
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A   F       +  N+ +Y+ LIDG  K G + EA  +  E+ +  ++P+++T+N L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
             L    ++  A    Q M +     N VTY  LI+G CK     KA     +M ++G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
           P+ ++++++I G  KAGNI  A  L+        VPD   + A+I+GLS      +   L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819

Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
           ++E     +     T   L+  L KN  +  A
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 243/460 (52%), Gaps = 31/460 (6%)

Query: 52  PSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKF---DS 102
           P++F    +  +  ++ H    + +  ++E L  IQ      N L+N     G+    D 
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQME-LRGIQTDLVNLNILVNCFCHLGQVCLNDK 64

Query: 103 VWE---FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
           V E   F+++++  G   + V+YG LID  C  G+   A+ +   +    ++P VV+Y+ 
Sbjct: 65  VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
           +I+ LC +  +++A  ++  M    + P++ TYN LM G   V  +  A+  +++ML  N
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184

Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           ++P++ TF +L+DGLCK GE++ A N    M K  V P++  YN L+DG+       +A 
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
            + + M +  ++PDV +Y+++I GLC    ++ A  LL++M+ + +  N VTY+SLIDG 
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
            K G +  A  + ++M  +G   +V+T++SL+D  CK   +D A+ L T++  + + PD+
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
             +T L+DGL K+G +K+   +Y+ +              LI G   +     AL+    
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLL-- 408

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
              K +   C+PN V +  +I+AL  +    KA +L  +M
Sbjct: 409 --SKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 230/448 (51%), Gaps = 36/448 (8%)

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV------ 205
           PT+  +  +   L   N      S+   M   G+  +L   N L++ +C +  V      
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
              L F+ +++    Q N V++G L+DGLCK GE RAA     ++    V PN+ +Y+ +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I   CK   + +A  L S+M    ISPDV TYN L+ G   VG+L+ A GL  +M  + I
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             ++ T+N L+DG CKEG+M+KA +V + M ++ V+P+V+T++SL+DG       + A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           ++  M  + + PDV  ++ +I+GL K   + E + L KEM    + P+  T SSLI GL 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVL-YAAIIQALCYDGQILKASKLFSDMRSDNL 504
           K+GRI +A +   E  ++       P  V+ Y +++ ALC + Q+ KA  L + ++   +
Sbjct: 306 KSGRIFDAWDLVNEMHNRG-----QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI 360

Query: 505 RPDNCTYTTMLRGLLRAKRMLD---------------------VMMLLADMIKMGIVPDA 543
           +PD  TYT ++ GL +  R+ D                      + LL+ M   G  P+ 
Sbjct: 361 QPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNP 420

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKE 571
           V  ++++R   EN D+    +  E L+E
Sbjct: 421 VTFEILIRALFEN-DMND--KAVELLRE 445



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 189/372 (50%), Gaps = 24/372 (6%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
           + N   + TLI    + G    A+ V R I+   V P +   + ++  L K       ++
Sbjct: 81  QLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFD 140

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            Y +M+L  +  DV+TY  L+  C   G + +A+ LF++M+ K I+P +  + IL+ GLC
Sbjct: 141 LYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLC 200

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            E +M +A ++   M +  V P++ TYN+LMDGY  V   N+A   ++ M    + P+V 
Sbjct: 201 KEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVH 260

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ V+++GLCK   +  A N    M    + PN   Y+ LIDG  K+G +F+A  L +EM
Sbjct: 261 SYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEM 320

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
                  DV TYN L+  LC   Q++ A  LL K+  +GI  ++ TY  L+DG CK G +
Sbjct: 321 HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRL 380

Query: 346 ---------------------EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
                                +KALS+ S+M + G  PN VTF  LI    +    D A+
Sbjct: 381 KDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAV 440

Query: 385 GLYTEMVIKSLV 396
            L  EM+ + L+
Sbjct: 441 ELLREMIARGLL 452



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 10/363 (2%)

Query: 218 HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL-- 275
           +N  P +  FG +   L K+       +    M   G+  ++   N L++  C  G +  
Sbjct: 2   NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61

Query: 276 ----FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
                E +    ++       +  +Y  LI GLC  G+   A  +L+ +    +  NVV 
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y+++I   CK+  +  A  + SQM  K + P+V+T+++L+ G    G +  A+GL+ +M+
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181

Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
           +K++ PD+  F  L+DGL K+G MK+   +   M++  + P V T +SL+ G F   + +
Sbjct: 182 LKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQEN 241

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A   F+  T    G   +P+   Y+ +I  LC    + +A  L  +M S ++ P+  TY
Sbjct: 242 KAT--FVFNTMARRG--VTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTY 297

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           ++++ GL ++ R+ D   L+ +M   G   D +    ++    +N  +  A      +K+
Sbjct: 298 SSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKD 357

Query: 572 SRI 574
             I
Sbjct: 358 QGI 360



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 21/291 (7%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLIK 96
            N + +    P +  F+ L+    + G +++A   L V  K  V P +   N+L++G   
Sbjct: 177 FNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFL 236

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             + +     +  M   G+  DV +Y V+I+  C    V +A+NL  EM  K + P  V 
Sbjct: 237 VKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT 296

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           Y+ LI GL    ++ +A  +   M   G   ++ TYN+L+D  CK   V++A+    ++ 
Sbjct: 297 YSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIK 356

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              +QP++ T+ +L+DGLCK G L+ A                 VY  L+       +LF
Sbjct: 357 DQGIQPDIYTYTILVDGLCKNGRLKDAQE---------------VYQILLIKGYHLDSLF 401

Query: 277 E-AMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           + A+SL S+ME    +P+  T+ ILI+ L      + A  LL++M   G+L
Sbjct: 402 DKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 267/572 (46%), Gaps = 46/572 (8%)

Query: 24  NLLKSRKPHHVCYSVFNALNSL--EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI--- 78
           + LK    H +   + + L +L  E  K      S ++ A++E G + +A+ +Y  +   
Sbjct: 104 SFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVEL 163

Query: 79  -EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK 137
            + +P + ACNALL+ ++K  + +   + Y+EM   G   D  +  +++   C +G V +
Sbjct: 164 YDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEE 223

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
              L ++   KG  P +V Y  +I G C    +  A+ +F+ ++  G +P L T+  +++
Sbjct: 224 GRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMIN 283

Query: 198 GYCKVADV---NRALEFYHE--------------------------------MLHHNLQP 222
           G+CK  D    +R LE   E                                ++ ++ +P
Sbjct: 284 GFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKP 343

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           ++ T+ +L++ LCK G+   A       +K G+      Y  LI  +CK+     A  L 
Sbjct: 344 DIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLL 403

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            ++ +    PD+ TY ILI GL   G ++ A  +  K+   G+  +   YN L+ G CK 
Sbjct: 404 LQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G    A  + S+M ++ + P+   +++LIDG  ++G+ D A  ++T  V K +  DVV  
Sbjct: 464 GRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHH 523

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
            A+I G  + G + E L     M E  + P  FT S++I G  K   ++ A+  F +   
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRD--- 580

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
             +   C PN V Y ++I   C  G    A + F +M+S +L P+  TYTT++R   +  
Sbjct: 581 -MEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKES 639

Query: 523 RMLDVMMLLAD-MIKMGIVPDAVINQVMVRGY 553
             L+  +   + M+    VP+ V    +++G+
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 242/522 (46%), Gaps = 24/522 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++T+I  + ++G IE A  V++++++   +P ++    ++NG  KKG F +     
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLL 298

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           EE+   GL   V     +ID     G  +        ++    +P +  Y ILI+ LC E
Sbjct: 299 EEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKE 358

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K   A  +     + G++    +Y  L+  YCK  + + A +   ++     +P++VT+
Sbjct: 359 GKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTY 418

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
           G+L+ GL   G +  A N  V +   GV P+  +YN L+ G CK G    A  L SEM  
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             I PD + Y  LI G    G  + A  +     ++G+  +VV +N++I G+C+ G +++
Sbjct: 479 RSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           AL+  ++M E+ + P+  T+S++IDG  K  ++  A+ ++ +M      P+VV +T+LI+
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLIN 598

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE--KTDKTD 465
           G    G+       +KEM    + P+V T ++LI    K         ++ E   T+K  
Sbjct: 599 GFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNK-- 656

Query: 466 GGYCSPNHVLYAAIIQALCYD--------------GQILKASKLFSDMRSDNLRPDNCTY 511
              C PN V +  ++Q                   GQ     + F  M+SD        Y
Sbjct: 657 ---CVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAY 713

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            ++L  L     +    ML   M+K G  PD V    ++ G+
Sbjct: 714 NSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 184/433 (42%), Gaps = 53/433 (12%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+    K  ++D   +   ++   G   D+VTYG+LI      G +  A+N+  ++ID+G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           + P   IY +L+ GLC   + + A+ +F  M +  ++P+ Y Y  L+DG+ +  D + A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           + +   +   ++ +VV    ++ G C+ G L  A      M +  + P+ F Y+ +IDG+
Sbjct: 506 KVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            K  ++  A+ +  +MEK +  P+V TY  LI G C  G    AE   ++M    ++ NV
Sbjct: 566 VKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNV 625

Query: 330 VTYNSLIDGYCKEGD-MEKALSVCSQMTEKGVEPNVVTFSSLIDG--------------- 373
           VTY +LI  + KE   +EKA+     M      PN VTF+ L+ G               
Sbjct: 626 VTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDG 685

Query: 374 ----------------------------------QCKAGNIDAAMGLYTEMVIKSLVPDV 399
                                              C  G +  A  L   MV K   PD 
Sbjct: 686 FNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDP 745

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI---SNALNF 456
           V F A++ G    GN K+   +    L+ K        S ++        I   S  L+ 
Sbjct: 746 VSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHA 805

Query: 457 FLEKTDKTDGGYC 469
            +EK D  +   C
Sbjct: 806 MVEKADTKEPEIC 818



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 86/440 (19%)

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNC 264
           N  ++  HE L H L               + G L  A   + ++ + +   P++   N 
Sbjct: 127 NENVKLTHEALSHVLH-----------AYAESGFLSKAVEIYDYVVELYDSVPDVIACNA 175

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           L+    K+  L +A  +  EM +     D ++  I++KG+C  G++E    L++  + +G
Sbjct: 176 LLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKG 235

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N+V YN++I GYCK GD+E A  V  ++  KG  P + TF ++I+G CK G+  A+ 
Sbjct: 236 CVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASD 295

Query: 385 GLYTE-----------------------------------MVIKSLVPDVVVFTALIDGL 409
            L  E                                   +V     PD+  +  LI+ L
Sbjct: 296 RLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRL 355

Query: 410 SKDGNMKETLRLYKE-----------------------------------MLEAKITPSV 434
            K+G  +    L  E                                   + E    P +
Sbjct: 356 CKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDI 415

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T   LIHGL  +G + +A+N  ++  D+      SP+  +Y  ++  LC  G+ L A  
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRG----VSPDAAIYNMLMSGLCKTGRFLPAKL 471

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
           LFS+M   ++ PD   Y T++ G +R+    +   +    ++ G+  D V +  M++G+ 
Sbjct: 472 LFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFC 531

Query: 555 ENGDLKSAFRCSEFLKESRI 574
            +G L  A  C   + E  +
Sbjct: 532 RSGMLDEALACMNRMNEEHL 551



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 28/339 (8%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR-------KIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           V++TLI  F   G  +EA  V+        K++V+      NA++ G  + G  D     
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHH----NAMIKGFCRSGMLDEALAC 542

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              M    LV D  TY  +ID    Q D+  A+ +F +M     +P VV YT LI+G C 
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCC 602

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK-VADVNRALEFYHEMLHHNLQPNVV 225
           +     AE  F+ M+   +VPN+ TY  L+  + K  + + +A+ ++  M+ +   PN V
Sbjct: 603 QGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEV 662

Query: 226 TFGVLMDGLCKVGELRAAGN--------------FFVHMAKFGVFPNIFVYNCLIDGHCK 271
           TF  L+ G  K    R  G               FF  M   G   +   YN ++   C 
Sbjct: 663 TFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCV 722

Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
            G +  A  L   M K   SPD  ++  ++ G C VG  +    +  +   E  L   V 
Sbjct: 723 HGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVR 782

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNVVTFS 368
           Y+ +++ +  +  + +A ++   M EK    EP +   S
Sbjct: 783 YSRVLEQHLPKAVICEASTILHAMVEKADTKEPEICRIS 821


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 212/395 (53%), Gaps = 3/395 (0%)

Query: 68  IEEALW-VYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
           I++A+   YR I +   P+       L  + KK ++ +V     +M L G+  +  T  +
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
           LI+  C    +  A+++  +M   GI+P  V +T LI+GLCNE ++ EA  +F  M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
            +PN  T+  L+D  CK   V+ A   +  M    ++PN+ T+  LM+G C   E+  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
             F  M   G  P++  Y+ LI+G+CK+  + EA +L ++M + E+ P+  TYN L++GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
           C    L  A+ L +KM   G+L N+ TY+ L+DG CK G +E+AL + + M E+ +EP++
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
           V ++ LI G   AG ++ A  L++++    + P V  +  +I GL K+G   E  +L+++
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           M +    P   + + +I G  +N   S A+    E
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDE 461



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 200/382 (52%), Gaps = 3/382 (0%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N    + LI +   + HI  A+ V  K   + + P       L+NGL  +G+     E +
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            EM     + + VT+ +L+D  C +G V +A  +F+ M +KG+EP +  Y  L++G C  
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M +A  +F  M   G  P++++Y+ L++GYCK   ++ A     +M    L PN VT+
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
             LM GLC    L  A   F  M   G+ PN+  Y+ L+DG CK G+L EA+ L + M++
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
            ++ PD+  YNILI+G+   G+LE A+ L  K++  GI  +V TYN +I G  KEG  ++
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  +M + G  P+  +++ +I G  +  +   A+ L  EMV +    D   F  L+D
Sbjct: 420 AYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479

Query: 408 GLSKDGNMKETLRLYKEMLEAK 429
             S D  +   +R   ++ + K
Sbjct: 480 LESHDEIISRFMRESSQIRKMK 501



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 223/436 (51%), Gaps = 12/436 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A+  F  MI     P+ V     +  +  + +     S+   M   GV  N YT N L++
Sbjct: 70  AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILIN 129

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
             C+++ ++ A+    +M    +QP+ VTF  L++GLC  G ++ A   F  MA     P
Sbjct: 130 SLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMP 189

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N   +  L+D  CK G + EA  +   M +  + P+++TYN L+ G C   ++  A  + 
Sbjct: 190 NTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF 249

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
           + M  +G   +V +Y+ LI+GYCK   +++A ++ +QM+EK + PN VT+++L+ G C A
Sbjct: 250 EIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHA 309

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
            ++  A  L+ +M    ++P++  ++ L+DGL K G+++E L+L   M E K+ P +   
Sbjct: 310 SSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLY 369

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
           + LI G+F  G++  A   F     K       P+   Y  +I+ L  +G   +A KLF 
Sbjct: 370 NILIQGMFIAGKLEVAKELF----SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFR 425

Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
            M  D   PD+C+Y  +++G L+ +     + L+ +M+      D+   ++++       
Sbjct: 426 KMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL------- 478

Query: 558 DLKSAFR-CSEFLKES 572
           DL+S     S F++ES
Sbjct: 479 DLESHDEIISRFMRES 494



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 207/415 (49%), Gaps = 5/415 (1%)

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
           D++  FY  M+        V  G  +     +      ++L ++M   G+        IL
Sbjct: 69  DAMASFYR-MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I+ LC  + +  A S+   M + G+ P+  T+  L++G C    +  A+E ++EM   + 
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            PN VTF +L+D LCK G +  A   F  M + GV PNI+ YN L++G+C    + +A  
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASK 247

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           +   M     +P V +Y+ILI G C   +++ A+ LL +M ++ ++ N VTYN+L+ G C
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
               + +A  +  +M   G+ PN+ T+S L+DG CK G+++ A+ L T M  + L PD+V
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           ++  LI G+   G ++    L+ ++    I PSV T + +I GL K G    A   F + 
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            D  DG    P+   Y  IIQ    +     A +L  +M       D+ T+  +L
Sbjct: 428 ED--DGFL--PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 4/393 (1%)

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +A + F  M      P+       +    K    +  +   ++M    +  N  T  +L+
Sbjct: 69  DAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           + LC++  +  A +    M K G+ P+   +  LI+G C  G + EA+ L +EM   +  
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+  T+ IL+  LC  G +  A  + + M ++G+  N+ TYN+L++GYC   +M  A  V
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  KG  P+V ++S LI+G CK+  ID A  L T+M  K L+P+ V +  L+ GL  
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             ++ E   L+K+M  + + P++ T S L+ GL K+G +  AL       ++       P
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK----LEP 364

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           + VLY  +IQ +   G++  A +LFS + ++ +RP   TY  M++GLL+     +   L 
Sbjct: 365 DIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLF 424

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             M   G +PD+    V+++G+ +N D  +A +
Sbjct: 425 RKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQ 457



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 135/251 (53%), Gaps = 4/251 (1%)

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
           G+  N  T N LI+  C+   +  A+SV S+M + G++P+ VTF++LI+G C  G I  A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           + L+ EM  +  +P+ V FT L+D L K G + E   +++ M E  + P+++T ++L++G
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235

Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
                 +++A   F    +   G  C+P+   Y+ +I   C   +I +A  L + M    
Sbjct: 236 YCLRLEMNDASKVF----EIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291

Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L P+  TY T+++GL  A  +L+   L   M   G++P+     +++ G  ++G L+ A 
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351

Query: 564 RCSEFLKESRI 574
           +    ++E ++
Sbjct: 352 KLLTSMQERKL 362


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 211/430 (49%), Gaps = 5/430 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N LL  LI+   FD  W  +  ++   +V +  ++G++I  CC  G  ++   L
Sbjct: 122 PLSNTFNNLLCLLIRSNYFDKAWWIFN-VLKSKVVLNAYSFGIMITGCCEAGYFVRVFRL 180

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              + + G+ P VVIYT LI G C    ++ A+++F  M   G+VPN +TY+ LM+G+ K
Sbjct: 181 LAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFK 240

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
                   + Y  M    + PN   +  L+   C  G +  A   F  M + G+   +  
Sbjct: 241 QGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMT 300

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI G C+     EA+ L  ++ K  +SP++ TYNILI G C VG+++ A  L  ++ 
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+   +VTYN+LI GY K  ++  AL +  +M E+ +  + VT++ LID   +    D
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTD 420

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +++ M    LVPDV  ++ LI G   +GNMKE  + +K + E  + P+    +++I
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMI 480

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HG  K G    AL    E           PN   + + +  LC D +  +A  L   M +
Sbjct: 481 HGYCKEGSSYRALRLLNEMVHSG----MVPNVASFCSTMGLLCRDEKWKEAELLLGQMIN 536

Query: 502 DNLRPDNCTY 511
             L+P    Y
Sbjct: 537 SGLKPSVSLY 546



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 242/516 (46%), Gaps = 13/516 (2%)

Query: 32  HHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC---- 87
           HH  +S+   LN L      P   S ++   S  G I  +L +        +        
Sbjct: 35  HHTSHSISFILNHLLSSGMLPQAQSLILRLIS--GRIPSSLMLQLTQAHFTSCSTYTPLY 92

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +A++N  +     D    F   M+  G      T+  L+          KA  +F+ +  
Sbjct: 93  DAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS 152

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K +      + I+I G C     V    +   + E G+ PN+  Y  L+DG CK  DV  
Sbjct: 153 K-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           A   + +M    L PN  T+ VLM+G  K G  R     + +M + G+ PN + YNCLI 
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
            +C  G + +A  + +EM +  I+  V TYNILI GLC   +   A  L+ K+ K G+  
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N+VTYN LI+G+C  G M+ A+ + +Q+   G+ P +VT+++LI G  K  N+  A+ L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            EM  + +    V +T LID  ++     +   ++  M ++ + P V+T S LIHG   N
Sbjct: 392 KEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVN 451

Query: 448 GRISNALNFFLEKTDKTDGG-YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
           G +  A      K  K+ G  +  PN V+Y  +I   C +G   +A +L ++M    + P
Sbjct: 452 GNMKEA-----SKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +  ++ + +  L R ++  +  +LL  MI  G+ P 
Sbjct: 507 NVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 206/427 (48%), Gaps = 38/427 (8%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYR--KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           + F+ L+       + ++A W++   K +V+    +   ++ G  + G F  V+     +
Sbjct: 125 NTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVL 184

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              GL  +VV Y  LID CC  GDVM A NLF +M   G+ P    Y++L++G   +   
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQ 244

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM--------------- 215
            E   M+ +M   G+VPN Y YN L+  YC    V++A + + EM               
Sbjct: 245 REGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 216 ---------------LHHN-----LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV 255
                          L H      L PN+VT+ +L++G C VG++  A   F  +   G+
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364

Query: 256 FPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEG 315
            P +  YN LI G+ K  NL  A+ L  EME+  I+    TY ILI     +   + A  
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACE 424

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           +   M K G++ +V TY+ LI G C  G+M++A      + E  ++PN V ++++I G C
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           K G+   A+ L  EMV   +VP+V  F + +  L +D   KE   L  +M+ + + PSV 
Sbjct: 485 KEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSV- 543

Query: 436 TVSSLIH 442
           ++  ++H
Sbjct: 544 SLYKMVH 550



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 204/453 (45%), Gaps = 23/453 (5%)

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPN------- 188
           +K L LF+    +G+  T    + +++ L +   + +A+S+   +   G +P+       
Sbjct: 20  IKTLLLFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLIS-GRIPSSLMLQLT 78

Query: 189 --------LYT--YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
                    YT  Y+A+++ Y      ++AL F H M+H    P   TF  L+  L +  
Sbjct: 79  QAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSN 138

Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
               A   F ++ K  V  N + +  +I G C+AG       L + +E+F +SP+V  Y 
Sbjct: 139 YFDKAWWIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYT 197

Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
            LI G C  G +  A+ L  KM + G++ N  TY+ L++G+ K+G   +   +   M   
Sbjct: 198 TLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS 257

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G+ PN   ++ LI   C  G +D A  ++ EM  K +   V+ +  LI GL +     E 
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           ++L  ++ +  ++P++ T + LI+G    G++  A+  F    ++      SP  V Y  
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF----NQLKSSGLSPTLVTYNT 373

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I        +  A  L  +M    +     TYT ++    R         + + M K G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSG 433

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           +VPD     V++ G   NG++K A +  + L E
Sbjct: 434 LVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGE 466



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 147/318 (46%), Gaps = 5/318 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
           +Y+ +++ +  + +  +A++    M     +P   T+N L+  L      + A  +   +
Sbjct: 91  LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            K  ++ N  ++  +I G C+ G   +   + + + E G+ PNVV +++LIDG CK G++
Sbjct: 151 -KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
             A  L+ +M    LVP+   ++ L++G  K G  +E  ++Y+ M  + I P+ +  + L
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I     +G +  A   F E  +K  G  C    + Y  +I  LC   +  +A KL   + 
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREK--GIACGV--MTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
              L P+  TY  ++ G     +M   + L   +   G+ P  V    ++ GY +  +L 
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 561 SAFRCSEFLKESRIGSSE 578
            A    + ++E  I  S+
Sbjct: 386 GALDLVKEMEERCIARSK 403



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 105/226 (46%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K+ + P I   N L+NG    GK D+    + ++   GL   +VTY  LI       ++ 
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
            AL+L  EM ++ I  + V YTILI      N   +A  M   M + G+VP++YTY+ L+
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
            G C   ++  A + +  +   +LQPN V +  ++ G CK G    A      M   G+ 
Sbjct: 446 HGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
           PN+  +   +   C+     EA  L  +M    + P V  Y ++ K
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 240/469 (51%), Gaps = 14/469 (2%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
           C QG +  AL L ++M+  G  P ++++  L++GLC    + +A+ + R MRE G  PN 
Sbjct: 130 CLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNC 189

Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
            +YN L+ G C V +V++AL  +  +  + ++PN VT  +++  LC+ G +       + 
Sbjct: 190 VSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLE 249

Query: 250 ----MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
                ++     +I     L+D   K GN+ +A+ +  EM +  +  D   YN++I+GLC
Sbjct: 250 EILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLC 309

Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
             G +  A G +  M K G+  +V TYN+LI   CK G  + A  +   M   GV P+ +
Sbjct: 310 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQI 369

Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
           ++  +I G C  G++D A      M+ +SL+P+V+++  +IDG  + G+    L +   M
Sbjct: 370 SYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLM 429

Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
           L   + P+V+T ++LIHG  K GR+ +A  ++++   ++   +  P+   Y  ++ A C 
Sbjct: 430 LSYGVKPNVYTNNALIHGYVKGGRLIDA--WWVKNEMRSTKIH--PDTTTYNLLVGAACT 485

Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            G +  A +L+ +M     +PD  TYT ++RGL    R+ +   LL+ M   GI  D V 
Sbjct: 486 LGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVP 545

Query: 546 NQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPT 594
             ++V+ Y        A+   +    +R G     G +  S L H KPT
Sbjct: 546 FLILVKKYTRLQRPDEAYLVYKKWLVTRNG-----GVSCPSILNH-KPT 588



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 204/410 (49%), Gaps = 11/410 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S+ S+++      G ++ ALW+  K+     +P +   N LLNGL K G  +       E
Sbjct: 120 SIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVRE 179

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC---- 165
           M   G   + V+Y  LI   C   +V KAL LF  +   GI+P  V   I++H LC    
Sbjct: 180 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGV 239

Query: 166 --NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
             N N  +  E +  S  +     ++ T   LMD   K  +V +ALE + EM   N+  +
Sbjct: 240 IGNNNTKLLEEILDSS--QVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTD 297

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            V + V++ GLC  G + AA  F   M K GV P++F YN LI   CKAG    A  L  
Sbjct: 298 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHG 357

Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
            M+   ++PD  +Y ++I+GLC  G ++ A   LQ M K  +L  V+ +N +IDGY + G
Sbjct: 358 TMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYG 417

Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
           D   ALSV + M   GV+PNV T ++LI G  K G +  A  +  EM    + PD   + 
Sbjct: 418 DTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 477

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L+      G+++   +LY EML+    P + T + L+ GL   GR+  A
Sbjct: 478 LLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEA 527



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 225/467 (48%), Gaps = 8/467 (1%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           +   +  + E++   +  E   ++   ++++  L  +GK D+     E+M+  G +  ++
Sbjct: 96  SLDRLASLRESVCQTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLI 155

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
            +  L++  C  G + KA  L  EM + G  P  V Y  LI GLC+ N + +A  +F ++
Sbjct: 156 MHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTL 215

Query: 181 RECGVVPNLYTYNALMDGYCKVADV-NRALEFYHEMLHH---NLQPNVVTFGVLMDGLCK 236
            + G+ PN  T N ++   C+   + N   +   E+L     N   ++VT  +LMD   K
Sbjct: 216 NKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFK 275

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M++  V  +  VYN +I G C +GN+  A     +M K  ++PDVFT
Sbjct: 276 NGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 335

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI  LC  G+ + A  L   M   G+  + ++Y  +I G C +GD+++A      M 
Sbjct: 336 YNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSML 395

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ + P V+ ++ +IDG  + G+   A+ +   M+   + P+V    ALI G  K G + 
Sbjct: 396 KRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLI 455

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           +   +  EM   KI P   T + L+      G +  A   + E   +     C P+ + Y
Sbjct: 456 DAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRG----CQPDIITY 511

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
             +++ LC+ G++ +A  L S M+   +  D+  +  +++   R +R
Sbjct: 512 TELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQR 558



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 201/389 (51%), Gaps = 7/389 (1%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKF-DSV 103
           P  N   ++TLI     + ++++AL+++    K  + P    CN +++ L +KG   ++ 
Sbjct: 185 PSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNN 244

Query: 104 WEFYEEMVLCGLVA---DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
            +  EE++    V    D+VT  +L+D C   G+V++AL ++ EM  K +    V+Y ++
Sbjct: 245 TKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVI 304

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           I GLC+   MV A      M + GV P+++TYN L+   CK    + A + +  M +  +
Sbjct: 305 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGV 364

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
            P+ +++ V++ GLC  G++  A  F   M K  + P + ++N +IDG+ + G+   A+S
Sbjct: 365 APDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALS 424

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           + + M  + + P+V+T N LI G    G+L  A  +  +M    I  +  TYN L+   C
Sbjct: 425 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAAC 484

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
             G +  A  +  +M ++G +P+++T++ L+ G C  G +  A  L + M +  +  D V
Sbjct: 485 TLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHV 544

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAK 429
            F  L+   ++     E   +YK+ L  +
Sbjct: 545 PFLILVKKYTRLQRPDEAYLVYKKWLVTR 573



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 11/370 (2%)

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +M  LC  G++ AA      M + G  P + ++N L++G CK G + +A  L  EM +  
Sbjct: 125 IMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMG 184

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG----DM 345
            SP+  +YN LIKGLC V  ++ A  L   + K GI  N VT N ++   C++G    + 
Sbjct: 185 PSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNN 244

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            K L      ++     ++VT + L+D   K GN+  A+ ++ EM  K++  D VV+  +
Sbjct: 245 TKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVI 304

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL   GNM        +M++  + P VFT ++LI  L K G+   A +  L  T +  
Sbjct: 305 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACD--LHGTMQNV 362

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
           G   +P+ + Y  IIQ LC  G + +A++    M   +L P+   +  ++ G  R     
Sbjct: 363 G--VAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTS 420

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHT-- 583
             + +L  M+  G+ P+   N  ++ GY + G L  A+     ++ ++I    T  +   
Sbjct: 421 CALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLV 480

Query: 584 -TRSFLGHLK 592
                LGHL+
Sbjct: 481 GAACTLGHLR 490



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 9/389 (2%)

Query: 188 NLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF 247
           +L  ++++M   C    ++ AL    +ML     P ++    L++GLCK+G +  A    
Sbjct: 118 SLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177

Query: 248 VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             M + G  PN   YN LI G C   N+ +A+ L S + K+ I P+  T NI++  LC  
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQK 237

Query: 308 GQL-EGAEGLLQKMYKEGILA---NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           G +      LL+++     +    ++VT   L+D   K G++ +AL V  +M++K V  +
Sbjct: 238 GVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTD 297

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYK 423
            V ++ +I G C +GN+ AA G   +MV + + PDV  +  LI  L K G       L+ 
Sbjct: 298 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHG 357

Query: 424 EMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
            M    + P   +   +I GL   G +  A N FL+   K       P  +L+  +I   
Sbjct: 358 TMQNVGVAPDQISYKVIIQGLCIQGDVDRA-NEFLQSMLKRS---LLPEVLLWNVVIDGY 413

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
              G    A  + + M S  ++P+  T   ++ G ++  R++D   +  +M    I PD 
Sbjct: 414 GRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 473

Query: 544 VINQVMVRGYQENGDLKSAFRC-SEFLKE 571
               ++V      G L+ AF+   E LK 
Sbjct: 474 TTYNLLVGAACTLGHLRLAFQLYDEMLKR 502



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 152/296 (51%), Gaps = 12/296 (4%)

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
           S+C + + FE    +  ++ +++ LC  G+++ A  L +KM + G +  ++ +N L++G 
Sbjct: 106 SVC-QTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGL 164

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           CK G +EKA  +  +M E G  PN V++++LI G C   N+D A+ L++ +    + P+ 
Sbjct: 165 CKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNR 224

Query: 400 VVFTALIDGLSKDGNM-KETLRLYKEMLEAKITPS---VFTVSSLIHGLFKNGRISNALN 455
           V    ++  L + G +     +L +E+L++    +   + T + L+   FKNG +  AL 
Sbjct: 225 VTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALE 284

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
            + E + K        + V+Y  II+ LC  G ++ A     DM    + PD  TY T++
Sbjct: 285 VWKEMSQKN----VPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 340

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             L +A +      L   M  +G+ PD +  +V+++G    GD+    R +EFL+ 
Sbjct: 341 SALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVD---RANEFLQS 393


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 168/559 (30%), Positives = 280/559 (50%), Gaps = 22/559 (3%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
           + +VL N++ + +A  +++ +   L   + P  V   +   +NS EI   NP+VF  L+ 
Sbjct: 98  LVHVLVNSRNFNDALSIMESLM--LKNGKSPLEVLGGL---MNSYEICNSNPAVFDALVR 152

Query: 61  AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
             +++  +E A  V RK+ +      I A N  LN L+K G+ D  W  Y EMV  G   
Sbjct: 153 TCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSE 212

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           +V T+ ++I   C +  +++A+++   M+   I P VV + ++I      +KM E +   
Sbjct: 213 NVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIID---KASKMGEMDLAL 269

Query: 178 RSMRECGVV------PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           +  R   V+      PN+ TYN +++G+CK+  +  A     EM+   +  N  T+  L+
Sbjct: 270 KLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLI 329

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG  + G L  A      M +  + P+  VYN LI      G L EA  L S+M    I 
Sbjct: 330 DGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRIL 389

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD FTY+IL KGLC  G L  A  +   + +  ++ +  T+N LI+   +  ++  A  +
Sbjct: 390 PDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQL 449

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
            S M  +G++P++VT+ +L+ G CK G I+AA+ +Y + V      ++VV+ +++DGL K
Sbjct: 450 LSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK 509

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G++     L  ++ +     SV T ++L+HG   NG +  A   FLE  +         
Sbjct: 510 QGSIDAARLLVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAFALFLEMINVGS----LV 564

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V Y  +I  LC  G I +A +L   M S  + PD  TYTT++   +++    +V+ L 
Sbjct: 565 NIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELH 624

Query: 532 ADMIKMGIVPDAVINQVMV 550
             M+  G VPD    Q +V
Sbjct: 625 DYMVLKGAVPDRQTYQSLV 643



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 212/416 (50%), Gaps = 11/416 (2%)

Query: 165 CNENKMVE-AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           C + K VE A  + R +R  G    ++ +N  ++   K+ + ++    Y EM+      N
Sbjct: 154 CTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSEN 213

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
           V TF +++  LCK  +L  A +    M K  ++PN+  +N +ID   K G +  A+ L  
Sbjct: 214 VNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTR 273

Query: 284 EMEKF---EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
             E      +SP++ TYN +I G C + +LE A+ +L +M K GI +N  TY  LIDGY 
Sbjct: 274 NTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYA 333

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
           ++G ++ A  +C +M E  + P+ V ++SLI      G ++ A  L ++M+ + ++PD  
Sbjct: 334 RKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEF 393

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            ++ L  GL   G++ + LR++  ++E  +    +T + LI+ +F++  I+ A       
Sbjct: 394 TYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSM 453

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
             +       P+ V Y  ++   C +G+I  A +++      + + +   Y ++L GL +
Sbjct: 454 IVRG----IKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK 509

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
            +  +D   LL D ++     D+V    ++ G+  NG+++ AF  + FL+   +GS
Sbjct: 510 -QGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAF--ALFLEMINVGS 562



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 285 MEKFEI---SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
           M  +EI   +P VF  + L++    +  +EGA  +++K+  EG    +  +N+ ++   K
Sbjct: 134 MNSYEICNSNPAVF--DALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLK 191

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G+ +K  ++  +M   G   NV TF+ +I   CK   +  A+ +   M+   + P+VV 
Sbjct: 192 LGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVS 251

Query: 402 FTALIDGLSKDGNMKETLRLYK--EMLE-AKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
           F  +ID  SK G M   L+L +  E++    ++P++ T + +I+G  K  R+ +A N   
Sbjct: 252 FNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLA 311

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           E            N   YA +I      G +  A +L  +M    L PD   Y +++  L
Sbjct: 312 EMIKLG----IDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWL 367

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
                + +   LL+DMI   I+PD     ++ +G   +G L  A R   ++ E  +
Sbjct: 368 YIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNL 423


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 255/536 (47%), Gaps = 38/536 (7%)

Query: 44  SLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKF 100
           S+ +P  +   ++ LI    + G + +AL +   +   E  P++     LL  + K   F
Sbjct: 130 SMPVPP-DAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGF 188

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTIL 160
               +  +EM   G   ++VTY V+I+  C +  V  A  + + +   G +P  V YT +
Sbjct: 189 GQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTV 248

Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
           + GLC   +  + E +F  M E   VPN  T++ L+  +C+   V RA+E    M  H  
Sbjct: 249 LKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGC 308

Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
             N     ++++ +CK G +  A  F  +M  +G  P+   Y  ++ G C+AG   +A  
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKE 368

Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYC 340
           L +EM +    P+  T+N  I  LC  G ++ A  L+++M + G    +VTYN+L++G+C
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428

Query: 341 KEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
            +G ++ AL + + +     EPN +T+++L+ G C A  +DAA  L  EM+      +VV
Sbjct: 429 VQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVV 485

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--- 457
            F  L+    + G ++E + L ++M+E   TP++ T ++L+ G+ ++     AL      
Sbjct: 486 TFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGL 545

Query: 458 ------------------LEKTDKTDGGY----------CSPNHVLYAAIIQALCYDGQI 489
                             L + D+ +               P  V+Y  I+ ALC   + 
Sbjct: 546 VSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCET 605

Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
            +A   F+ M S++  P+  TY  ++ GL R   + +   +L+++   G++  ++I
Sbjct: 606 DRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 249/540 (46%), Gaps = 36/540 (6%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++TL+  +   G ++ A  +   + V P       L+ GL  +G+        ++M+   
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
               VVTY VL++  C      +A+ + DEM  KG  P +V Y ++I+G+C E+++ +A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   +   G  P+  +Y  ++ G C           + EM+ +N  PN VTF +L+   
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+ G +  A      M++ G   N  + N +I+  CK G + +A    + M  +  SPD 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +Y  ++KGLC  G+ E A+ LL +M ++    N VT+N+ I   C++G +++A+ +  Q
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 355 MTEKG--------------------------------VEPNVVTFSSLIDGQCKAGNIDA 382
           M E G                                 EPN +T+++L+ G C A  +DA
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDA 467

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A  L  EM+      +VV F  L+    + G ++E + L ++M+E   TP++ T ++L+ 
Sbjct: 468 AAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD 527

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G+ ++     AL        K      S + + Y++I+  L  + +I +A ++F  ++  
Sbjct: 528 GITEDCNSEEALELLHGLVSKG----ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDM 583

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +RP    Y  +L  L +       +   A M+    +P+     +++ G    G LK A
Sbjct: 584 GMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEA 643



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 216/476 (45%), Gaps = 10/476 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           ++ L  LI +          E     G   DV     LI   C +G    A  +      
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G    V  Y  L+ G C   ++  A  +  SM    V P+ YTY  L+ G C    V  
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGD 155

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL    +ML    QP+VVT+ VL++ +CK      A      M   G  PNI  YN +I+
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G C+   + +A  + + +  +   PD  +Y  ++KGLC   + E  E L  +M +   + 
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N VT++ L+  +C+ G +E+A+ V  +M+E G   N    + +I+  CK G +D A    
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
             M      PD + +T ++ GL + G  ++   L  EM+     P+  T ++ I  L + 
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
           G I  A+   +E+  +     CS   V Y A++   C  G++  A +LF+ +  +   P+
Sbjct: 396 GLIDQAI-LLIEQMPEYG---CSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PN 448

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
             TYTT+L GL  A+R+     LLA+M++     + V   V+V  + + G ++ A 
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAI 504



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 230/484 (47%), Gaps = 14/484 (2%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +  C  L+  L ++G+              G   DV  Y  L+   C  G +  A  L
Sbjct: 68  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM--RECGVVPNLYTYNALMDGY 199
              M    + P    YT LI GLC+  ++ +A S+   M  REC   P++ TY  L++  
Sbjct: 128 IASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ--PSVVTYTVLLEAV 182

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK +   +A++   EM      PN+VT+ V+++G+C+   +  A      ++ +G  P+ 
Sbjct: 183 CKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDT 242

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  ++ G C A    +   L  EM +    P+  T+++L++  C  G +E A  +L +
Sbjct: 243 VSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDR 302

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G  AN    N +I+  CK+G ++ A    + M   G  P+ +++++++ G C+AG 
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            + A  L  EMV K+  P+ V F   I  L + G + + + L ++M E   +  + T ++
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L++G    GR+ +AL  F       +   C PN + Y  ++  LC+  ++  A++L ++M
Sbjct: 423 LVNGFCVQGRVDSALELF-------NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEM 475

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
             ++   +  T+  ++    +   + + + L+  M++ G  P+ +    ++ G  E+ + 
Sbjct: 476 MQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNS 535

Query: 560 KSAF 563
           + A 
Sbjct: 536 EEAL 539



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 7/271 (2%)

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           ++ L     L  A  L+++    G   +V     LI   C+ G    A  V       G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
             +V  +++L+ G C+ G +DAA  L   M +    PD   +T LI GL   G + + L 
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALS 158

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  +ML  +  PSV T + L+  + K+     A+       D+     C+PN V Y  II
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVL----DEMRAKGCTPNIVTYNVII 214

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             +C + ++  A ++ + + S   +PD  +YTT+L+GL  AKR  DV +L  +M++   V
Sbjct: 215 NGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV 274

Query: 541 PDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           P+ V   ++VR +   G ++ A    + + E
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSE 305


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 257/542 (47%), Gaps = 7/542 (1%)

Query: 24  NLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEAL-WVYRKIEVL- 81
           +LL + +   + + V+N +     P+ +    S LI    E   +E+A+ +++   +V+ 
Sbjct: 210 SLLHNMRHTDIMWDVYNEIKVSGAPQ-SECTTSILIHGLCEQSKLEDAISFLHDSNKVVG 268

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P+I + N +++   K G  D     +  MV  GL+ D  +Y +L+   C  G + +AL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            D+M   G+EP VV Y  L  G      M  A  + + M   G+ P+L TY  L+ G+C+
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           + ++  AL+   E L    + NV+ + +L+  LCKVG +  A   F  M    + P+  V
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI G CK G +  A  L  +M      P  F    ++ GL   G +  A        
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           +  ++ +VV YN +IDGY +   + +A+ +  +M E+G+ P+VVTF++LI+G C+ G++ 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  +   + +K LVP VV +T L++   + GNM+E      EM    + P+  T + LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            GL +  ++  +L        K       P+ V Y  IIQ  C   +I KA +L++ M  
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKG----LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
            N  P   TY  ++  L     + DV  ++  +    I         +++ +   G +  
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSK 744

Query: 562 AF 563
           A 
Sbjct: 745 AL 746



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 255/515 (49%), Gaps = 7/515 (1%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF-DSVWEFYEE 109
           N  V+  L  A+S    I +AL+V  K++ L   QA     N L+   +  D +W+ Y E
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN-FQASVPTYNSLLHNMRHTDIMWDVYNE 227

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           + + G      T  +LI   C Q  +  A++   +  +K + P++V    ++   C    
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGL 286

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           +  A S F  M + G++ + ++YN L+ G C    ++ AL F  +M  H ++P+VVT+  
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L  G   +G +  A      M   G+ P++  Y  LI GHC+ GN+ EA+ L  E     
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
              +V  YN+L+  LC VG++E A  L  +M    +  + + Y+ LI G CKEG +++A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +  QM  K   P+     +++ G  K GNI  A   +       L+ DVV++  +IDG 
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   + E ++LY +M+E  ITPSV T ++LI+G  + G +  A      +  +  G   
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML--EVIRLKG--L 582

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+ V Y  ++ A C  G + +      +M ++ + P + TYT +++GL R  +M + + 
Sbjct: 583 VPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQ 642

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           LL  M   G++PD+V    +++ + +  ++  A +
Sbjct: 643 LLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ 677



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 238/489 (48%), Gaps = 7/489 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           ++TL   F  +G +  A  V +K+ +    P +     L+ G  + G  +   +  +E +
Sbjct: 344 YNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETL 403

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G   +V+ Y +L+ C C  G + +AL LFDEM    +EP  ++Y+ILIHGLC E  + 
Sbjct: 404 SRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQ 463

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            A  ++  MR     P+ +   A++ G  K  +++ A  ++      +L  +VV + +++
Sbjct: 464 RAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           DG  ++  +  A   +  M + G+ P++  +N LI+G C+ G+L EA  +   +    + 
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV 583

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P V TY  L+   C VG ++     L +M    ++   VTY  LI G C++  M ++L +
Sbjct: 584 PSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M  KG+ P+ VT++++I   CK   I  A+ LY  M++ +  P  V +  LI+ L  
Sbjct: 644 LEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
            G++K+  R+   + +  IT    T  ++I      G++S AL +F +   K  G   S 
Sbjct: 704 FGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAK--GFVISI 761

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
               Y+A+I  LC  G I +A   F  M S+ + PD     T+L    +      V   L
Sbjct: 762 RD--YSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819

Query: 532 ADMIKMGIV 540
           A ++K G +
Sbjct: 820 AMVVKSGFI 828



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 194/382 (50%), Gaps = 6/382 (1%)

Query: 37  SVFNALNSLEI-PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLN 92
           ++F+ + +L + P F   V+S LI    + G ++ A  +Y ++ +    P   A  A+L 
Sbjct: 432 TLFDEMETLRLEPDF--IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 93  GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
           GL K G       +++      L+ DVV Y ++ID       + +A+ L+ +MI++GI P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
           +VV +  LI+G C    ++EA  M   +R  G+VP++ TY  LM+ YC+V ++     F 
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFL 609

Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           HEM  + + P  VT+ VL+ GLC+  ++  +     +M   G+ P+   YN +I   CK 
Sbjct: 610 HEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKG 669

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             + +A+ L + M      P   TY +LI  LC  G L+  + ++  +    I     TY
Sbjct: 670 KEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTY 729

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            ++I  +C +G + KAL   +QM  KG   ++  +S++I+  CK G I  A   +  M+ 
Sbjct: 730 MTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLS 789

Query: 393 KSLVPDVVVFTALIDGLSKDGN 414
           + + PD  +   +++   + GN
Sbjct: 790 EGVTPDPEICKTVLNAFHQQGN 811



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 8/416 (1%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           +++ +L         + +A  +   M++     ++ TYN+L+     +   +   + Y+E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHN---MRHTDIMWDVYNE 227

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           +       +  T  +L+ GLC+  +L  A +F +H +   V P+I   N ++   CK G 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISF-LHDSNKVVGPSIVSINTIMSKFCKVGL 286

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           +  A S    M K  +  D F+YNIL+ GLC  G ++ A G    M K G+  +VVTYN+
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           L  G+   G M  A  V  +M  +G+ P++VT+++LI G C+ GNI+ A+ L  E + + 
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
              +V+ +  L+  L K G ++E L L+ EM   ++ P     S LIHGL K G +  A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             + +   K       P+H    A++  L  +G I +A   F      +L  D   Y  M
Sbjct: 467 QLYEQMRLKRK----FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
           + G +R   + + M L   MI+ GI P  V    ++ G+   GDL  A +  E ++
Sbjct: 523 IDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 192/412 (46%), Gaps = 3/412 (0%)

Query: 49  KFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWE 105
           K N   ++ L+    ++G IEEAL ++ ++E L   P     + L++GL K+G     ++
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            YE+M L            ++      G++ +A N FD      +   VV+Y I+I G  
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
             + + EA  ++  M E G+ P++ T+N L++G+C+  D+  A +    +    L P+VV
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  LM+  C+VG ++   +F   M    V P    Y  LI G C+   + E++ L   M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               + PD  TYN +I+  C   ++  A  L   M         VTY  LI+  C  GD+
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +    +   + ++ +     T+ ++I   C  G +  A+G + +M+ K  V  +  ++A+
Sbjct: 708 KDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           I+ L K G + E    +  ML   +TP      ++++   + G  S+   F 
Sbjct: 768 INRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++ +I  +  +  I EA+ +Y K+    + P++   N L+NG  ++G      +  E +
Sbjct: 518 LYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            L GLV  VVTY  L++  C  G++ +  +   EM    + PT V YT+LI GLC +NKM
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            E+  +   M   G++P+  TYN ++  +CK  ++ +AL+ Y+ ML HN  P  VT+ VL
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ LC  G+L+      V +    +      Y  +I  HC  G + +A+   ++M     
Sbjct: 698 INALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
              +  Y+ +I  LC  G +  A+     M  EG+  +     ++++ + ++G+      
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 351 VCSQMTEKG 359
             + + + G
Sbjct: 818 FLAMVVKSG 826


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 217/446 (48%), Gaps = 22/446 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI-----EVLPAIQACNALLNGL 94
             S+      P V  +  L+    + GH+ +AL V  ++     +V P I   N +++GL
Sbjct: 154 FTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGL 213

Query: 95  IKKGKFDSVWEFYEEMV--LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
            K G+      F +E +  + G   + VTY  L D  C  GD+  A  +   M  +G+ P
Sbjct: 214 CKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAP 273

Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVP----NLYTYNALMDGYCKVADVNRA 208
            V+    +I GLC   ++  A   FR  R   V P    N  TY+ L   +    +V+ A
Sbjct: 274 NVITMNTIIGGLCRVGRVGAALEFFREKRT--VWPEARGNAVTYSTLASAFLHCNNVDMA 331

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E +HEM  H  +P+ V +  ++ GL + G L  A      M K G   +   YN LI G
Sbjct: 332 MELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGG 391

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            C+   L EA  L  EM+   + PDV+TYN L+ GLC  G     + LL  M  +G   +
Sbjct: 392 FCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPS 451

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVT+ +L+ GYCK G  ++AL +   M E  ++PN V +++LID  CK+  +D A+ L+ 
Sbjct: 452 VVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFD 511

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
           EM  K++  +V  + AL+ GL      ++   L   M E + TP+  TV  L+  L + G
Sbjct: 512 EMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIG 571

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHV 474
             +  L  F+++ D+ D      NHV
Sbjct: 572 E-TERLKCFMQQRDQKD------NHV 590



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 233/528 (44%), Gaps = 19/528 (3%)

Query: 44  SLEIPKFNPSVFSTLIIAFSEMGH--IEEALWVYRKIEVLPAIQACNALL-NGLIKKGKF 100
           +L + + +P + S L    +E  H     +L     +     I   +ALL + L+++  F
Sbjct: 51  TLSLLRLSPGLASELYALIAEPSHAFTPASLASLHSLAARHRIPPPSALLLSKLVRR--F 108

Query: 101 DSVWE---FYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
            S  E   F  + +  G  A D+  +  L+      G++     LF  M D  ++P VV 
Sbjct: 109 SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVT 168

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECG--VVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           Y IL++GLC    + +A  +   M   G  V P++   N ++DG CK+  + +A+ F  E
Sbjct: 169 YGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDE 228

Query: 215 MLHH--NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
            + H     PN VT+  L D  C+VG++  A      M K GV PN+   N +I G C+ 
Sbjct: 229 RMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRV 288

Query: 273 GNLFEAMSLCSEMEKF--EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           G +  A+    E      E   +  TY+ L         ++ A  L  +M   G   + V
Sbjct: 289 GRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAV 348

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y ++I G  + G +  A +  + M + G + +   ++ LI G C+   +  A  L  EM
Sbjct: 349 MYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM 408

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
               L PDV  +  L+ GL K G+      L   M++    PSV T  +L+HG  K G+ 
Sbjct: 409 KGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKT 468

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
             AL  F       D     PN V+Y  +I  LC   ++  A KLF +MR  N+  +  T
Sbjct: 469 DEALRIF----RSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTT 524

Query: 511 YTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           Y  +L+GL   K       L+  M +    P+ V   V++    E G+
Sbjct: 525 YNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGE 572



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 171/359 (47%), Gaps = 10/359 (2%)

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P++  F  L+  L + G LR     F  M    V P++  Y  L++G CK+G++ +A+ +
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 282 CSEMEK--FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE--GILANVVTYNSLID 337
              M     ++ PD+   N ++ GLC +G+L+ A   + +  +   G   N VTYN L D
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 338 GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE--MVIKSL 395
            +C+ GD+  A  + ++M ++GV PNV+T +++I G C+ G + AA+  + E   V    
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEA 308

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
             + V ++ L        N+   + L+ EM +    P      ++I GL + GR+ +A  
Sbjct: 309 RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACT 368

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
                      G+   +   Y  +I   C   ++ +A +L  +M+   L+PD  TY T+L
Sbjct: 369 ---TAASMKKAGF-KLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLL 424

Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
            GL +A     V  LL  MI  G  P  V    +V GY + G    A R    + E+RI
Sbjct: 425 SGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 9/206 (4%)

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           +AA  L   +   +  PD+ +F +L+  L + GN++    L+  M +A + P V T   L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           ++GL K+G + +AL   L++        C P+  +   ++  LC  G+ L+ + +F D R
Sbjct: 173 LNGLCKSGHVGDALK-VLDRMSSPGSDVC-PDIAILNTVVDGLCKIGR-LQQAIIFVDER 229

Query: 501 SDNLR---PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
             ++    P+  TY  +     R   +     ++A M K G+ P+ +    ++ G    G
Sbjct: 230 MRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVG 289

Query: 558 DLKSAFRCSEFLKESRIGSSETEGHT 583
            + +A    EF +E R    E  G+ 
Sbjct: 290 RVGAAL---EFFREKRTVWPEARGNA 312


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 247/539 (45%), Gaps = 53/539 (9%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWE-FYEEMVLCGLVADV 119
           +F+  G I +  W    I +       N LL GL    +     +   + M   G   D 
Sbjct: 117 SFATFGLILKTGWRVNDIVI-------NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDT 169

Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMID---KGIEPTVVIYTILIHGLCNENKMVEAESM 176
           V+Y +L+   C +    +AL L   M +   +   P VV YT +I GLC       AE +
Sbjct: 170 VSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGV 229

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F+ M + GV PN  TYN L+ GY  +      ++   +M    L+P+  T+G L++ LC 
Sbjct: 230 FQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCA 289

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           + E+ +   F   M + G+ P+  ++N     + K G + +AM + ++M +  +SP+V  
Sbjct: 290 LSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN 346

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI  LC +G+++ AE    +M  EG+  N+V +NSL+ G C     E+A  +  +M 
Sbjct: 347 YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 406

Query: 357 EKGVEPNVVTFSSLI-----------------------------------DGQCKAGNID 381
           ++G+ PN V F++LI                                    G C AG  D
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A  ++  MV   L P  V +  L+ G      + +   L++EML   +TP V T ++++
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
           HGLF+  R S A   +L   +   G  C  +   Y  I+  LC    + +A K+F  + S
Sbjct: 527 HGLFQTKRFSEAKELYLNMINS--GTKC--DIYTYNIILNGLCKSNCVDEAFKMFQSLCS 582

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
             L+ +  T+T M+  LL+  R  D M L A +   G+VP+ V  +++     E G L+
Sbjct: 583 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 239/514 (46%), Gaps = 13/514 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKI------EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           +S L+  F      EEAL + R +         P +     +++GL K   FD     ++
Sbjct: 172 YSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQ 231

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           +M+  G+  +  TY  LI      G   + + + ++M  +G++P    Y  L++ LC   
Sbjct: 232 QMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC--- 288

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            + E  S    M E G+ P+ + +N     Y K   +++A++ +++M  H L PNVV +G
Sbjct: 289 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 348

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L+D LCK+G +  A   F  M   GV PNI V+N L+ G C       A  L  EM   
Sbjct: 349 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 408

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
            I P+   +N LI  LC VG++     L+  M   G+  +  +Y  LI GYC  G  ++A
Sbjct: 409 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             V   M   G+ P  VT+++L+ G C A  ID A  L+ EM+ K + P VV +  ++ G
Sbjct: 469 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 528

Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
           L +     E   LY  M+ +     ++T + +++GL K+  +  A   F     K     
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG---- 584

Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
              N + +  +I AL   G+   A  LF+ + ++ L P+  TY  +   L+    + +  
Sbjct: 585 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 644

Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L + M K G  P++ +   +VR     GD+  A
Sbjct: 645 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 212/486 (43%), Gaps = 40/486 (8%)

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA- 173
           +  +  TY +LI C C  G +  +   F  ++  G     ++   L+ GLC+  ++ EA 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLH---HNLQPNVVTFGVL 230
           + + + M E G  P+  +Y+ L+ G+C       ALE    M +    +  PNVVT+  +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLCK      A   F  M   GV PN   YNCLI G+   G   E + +  +M    +
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 291 SPDVFTYNILIKGLCGV--------------------------------GQLEGAEGLLQ 318
            PD +TY  L+  LC +                                G ++ A  +  
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           KM + G+  NVV Y +LID  CK G ++ A    +QM  +GV PN+V F+SL+ G C   
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             + A  L  EM+ + + P+ V F  LI  L   G + E  RL   M    + P  F+ +
Sbjct: 394 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 453

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            LI G    GR   A   F    D       SP  V Y  ++   C   +I  A  LF +
Sbjct: 454 PLISGYCLAGRTDEAEKVF----DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M    + P   TY T+L GL + KR  +   L  +MI  G   D     +++ G  ++  
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 569

Query: 559 LKSAFR 564
           +  AF+
Sbjct: 570 VDEAFK 575



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 189/384 (49%), Gaps = 1/384 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P     N   +   K G  D   + + +M   GL  +VV YG LID  C  G V  A   
Sbjct: 307 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F++MI++G+ P +V++  L++GLC  +K   AE +   M + G+ PN   +N L+   C 
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 426

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
           V  V         M H  ++P+  ++  L+ G C  G    A   F  M   G+ P    
Sbjct: 427 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVT 486

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN L+ G+C A  + +A  L  EM +  ++P V TYN ++ GL    +   A+ L   M 
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G   ++ TYN +++G CK   +++A  +   +  KG++ N++TF+ +I    K G  +
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 606

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            AM L+  +    LVP+VV +  + + L ++G+++E   L+  M +    P+   +++L+
Sbjct: 607 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 666

Query: 442 HGLFKNGRISNALNFFLEKTDKTD 465
             L   G IS A   +L K D+ +
Sbjct: 667 RRLLHRGDISRA-GAYLSKLDERN 689



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 3/391 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +F+    A+++ G I++A+ ++ K+    + P +    AL++ L K G+ D     + +M
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G+  ++V +  L+   C      +A  L  EM+D+GI P  V +  LI  LCN  ++
Sbjct: 371 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 430

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
           +E   +   M   GV P+ ++Y  L+ GYC     + A + +  M+   L P  VT+  L
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTL 490

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + G C    +  A   F  M + GV P +  YN ++ G  +     EA  L   M     
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 550

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
             D++TYNI++ GLC    ++ A  + Q +  +G+  N++T+  +I    K G  E A+ 
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 610

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + + +   G+ PNVVT+  + +   + G+++    L++ M      P+  +  AL+  L 
Sbjct: 611 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 670

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             G++        ++ E   +    T S LI
Sbjct: 671 HRGDISRAGAYLSKLDERNFSVEASTTSLLI 701



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 5/376 (1%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIK 96
            N +     +P+V  +  LI A  ++G +++A   + ++    V P I   N+L+ GL  
Sbjct: 332 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 391

Query: 97  KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
             K++   E   EM+  G+  + V +  LI   C  G VM+   L D M   G+ P    
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFS 451

Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
           YT LI G C   +  EAE +F  M   G+ P   TYN L+ GYC  + ++ A   + EML
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
              + P VVT+  ++ GL +      A   +++M   G   +I+ YN +++G CK+  + 
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571

Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
           EA  +   +    +  ++ T+ I+I  L   G+ E A  L   +   G++ NVVTY  + 
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 631

Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
           +   +EG +E+  S+ S M + G  PN    ++L+      G+I  A    +++  ++  
Sbjct: 632 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 691

Query: 397 PDVVVFTALIDGLSKD 412
            +    + LI   + D
Sbjct: 692 VEASTTSLLISIFTSD 707


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 225/447 (50%), Gaps = 44/447 (9%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 19  MIHFLCTHQMFSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73

Query: 60  IAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  Y   R+ ++      C  +L  L+K   F  VW FYE+++ CG  
Sbjct: 74  TAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYP 133

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C +  +  A+S+
Sbjct: 134 A-----------------------------------SLYFFNILMHRFCKDGDIRVAQSV 158

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ +YN LM+GY ++ D++        ML   +QP+V T+ VL++GLCK
Sbjct: 159 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 218

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+ T
Sbjct: 219 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 278

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  +  TY +LIDG CKEGD++ A     +M 
Sbjct: 279 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 338

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD+  +T +I+   K G++ 
Sbjct: 339 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVW 398

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHG 443
           +  +L KEM      PSV T + L++G
Sbjct: 399 KGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 4/307 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY ++L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L++G+ 
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           + G+L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++ N V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L  EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +K L PD   +T LIDG  K+G++       K M++  I       ++LI GL + GR 
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A     E           P+   Y  II   C  G + K SKL  +M+ +   P   T
Sbjct: 363 VDAEKMLREMLSVG----LKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVT 418

Query: 511 YTTMLRG 517
           Y  ++ G
Sbjct: 419 YNVLMNG 425



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC      EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 12  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H L     T   +++ L K+   +    F+  + + G
Sbjct: 72  LITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECG 131

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT ++LI G  K G +  A     E   +        + V Y A+I  LC +G+ + A K
Sbjct: 312 FTYTTLIDGCCKEGDLDTA----FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G  P  V   V++ G
Sbjct: 368 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 4/207 (1%)

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G++ 
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN V +
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNGVTF 244

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
            G+ PD      ++ G  + GDL +AF
Sbjct: 305 KGLKPDKFTYTTLIDGCCKEGDLDTAF 331


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 221/433 (51%), Gaps = 9/433 (2%)

Query: 84  IQACNALLN-GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
           ++  N +L  GL ++  F    + ++ M   G+  D  ++  L+  CC +G   +A  L 
Sbjct: 148 VETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALL 204

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  +G        T+++   C + +  +   +F  M E G  PN+  Y A +DG CK 
Sbjct: 205 AAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKR 264

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFV 261
             V +A     EM+   L+PNV T   L+DGLCK+G    A   F+ + K   + PN+  
Sbjct: 265 GYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHT 324

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  +I G+CK G L  A  L   M +  ++P+  TY  LI G C  G  + A  L+ KM 
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMK 384

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            EG L N+ TYN++I G+CK+G +++A  V    T +G+ P+ VT++ LI   CK G+I 
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHIT 444

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A+ L+ +M   S  PD+  +T +I    +   M+++ +L+ + L   + P+  T +S+I
Sbjct: 445 YALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMI 504

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
            G  + G+ ++AL  F    ++     C P+ + Y A+I  LC + ++ +A  LF  M  
Sbjct: 505 AGYCRVGKSTSALKVF----ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLD 560

Query: 502 DNLRPDNCTYTTM 514
            ++ P + T  T+
Sbjct: 561 KHMVPCDVTCVTL 573



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 11/429 (2%)

Query: 137 KALNLFDEMIDKGIEPTVVIYT--ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +A ++  E+   G+ P VV     +L  GL   +    A   F  M   GV P+  ++ A
Sbjct: 131 EATDMLLELRSHGL-PLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRA 186

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+ G C+      A      M       +  T  V++   C+ G  R     F  M + G
Sbjct: 187 LVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG 246

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
             PN+  Y   +DG CK G + +A  +  EM    + P+V+T+  LI GLC +G  E A 
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306

Query: 315 GLLQKMYKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
            L  K+ K      NV TY  +I GYCKEG + +A  +  +M E+G+ PN  T+++LIDG
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            C+ G+ D A  L  +M ++  +P++  + A+I G  K G +++  ++ +      + P 
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPD 426

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
             T + LI    K G I+ AL+ F +  + +    C P+   Y  II   C   Q+ ++ 
Sbjct: 427 KVTYTMLITEHCKQGHITYALDLFNQMAENS----CHPDIDTYTTIIAMYCQQRQMEQSQ 482

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +LF    S  L P   TYT+M+ G  R  +    + +   M++ G +PD +    ++ G 
Sbjct: 483 QLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGL 542

Query: 554 QENGDLKSA 562
            +   L+ A
Sbjct: 543 CKESRLEEA 551



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 182/362 (50%), Gaps = 5/362 (1%)

Query: 56  STLIIAFSEMGHIEEALWVY-RKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           + ++ AF   G   +   ++ R +E+   P +    A ++GL K+G     +   EEMV 
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTVVIYTILIHGLCNENKMV 171
            GL  +V T+  LID  C  G   +A  LF +++     +P V  YT++I G C E K+ 
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +   M E G+ PN  TY  L+DG+C+    +RA E  ++M      PN+ T+  ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            G CK G+++ A          G+ P+   Y  LI  HCK G++  A+ L ++M +    
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           PD+ TY  +I   C   Q+E ++ L  K    G++    TY S+I GYC+ G    AL V
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP-DVVVFTALIDGLS 410
             +M + G  P+ +T+ +LI G CK   ++ A  L+  M+ K +VP DV   T   +   
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCR 579

Query: 411 KD 412
           +D
Sbjct: 580 RD 581



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 8/405 (1%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           A   FD M   G+ P    +  L+ G C E +  EA+++  +M   G   +  T   ++ 
Sbjct: 168 ARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVR 224

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+          +  M+     PNVV +   +DGLCK G ++ A +    M   G+ P
Sbjct: 225 AFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKP 284

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGL 316
           N++ +  LIDG CK G    A  L  ++ K     P+V TY ++I G C  G+L  AE L
Sbjct: 285 NVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 344

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L +M ++G+  N  TY +LIDG+C+ G  ++A  + ++M  +G  PN+ T++++I G CK
Sbjct: 345 LGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
            G I  A  +      + L PD V +T LI    K G++   L L+ +M E    P + T
Sbjct: 405 KGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDT 464

Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
            +++I    +  ++  +   F    DK       P    Y ++I   C  G+   A K+F
Sbjct: 465 YTTIIAMYCQQRQMEQSQQLF----DKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVF 520

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
             M      PD  TY  ++ GL +  R+ +   L   M+   +VP
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVP 565



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 155/350 (44%), Gaps = 40/350 (11%)

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
           GV P+   +  L+ G C+ G   EA +L + M +   S D  T  ++++  C  G+    
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
            GL  +M + G   NVV Y + +DG CK G +++A  V  +M  KG++PNV T +SLIDG
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 374 QCKAGNIDAAMGLYTE------------------------------------MVIKSLVP 397
            CK G  + A  L+ +                                    MV + L P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 398 DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
           +   +T LIDG  + G+      L  +M      P+++T +++I G  K G+I  A    
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
              T +   G C P+ V Y  +I   C  G I  A  LF+ M  ++  PD  TYTT++  
Sbjct: 416 RMATSQ---GLC-PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
             + ++M     L    + +G+VP       M+ GY   G   SA +  E
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFE 521


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 212/412 (51%), Gaps = 9/412 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 7   MIHFLCTHQMFSEAKSLIQXVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 61

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + ++      C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 62  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYP 121

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A +  + +L+   C  GD+  A ++FD +   G+ P+VV Y  L++G      + E   +
Sbjct: 122 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   GV P++YTY+ L++G CK + ++ A E + EML   L PN VTF  L+DG CK
Sbjct: 182 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M    + P++  YN LI G CK G+L +A  L  EM    + PD FT
Sbjct: 242 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 301

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G L+ A    ++M +E I  + V Y ++I G C+EG    A  +  +M 
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             G++P+  T++ +I+  CK G++     L  EM     VP V  +  L++G
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 191/371 (51%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE  +     T   +++   K+    
Sbjct: 47  KGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFK 106

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L+
Sbjct: 107 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 166

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++
Sbjct: 167 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 226

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G+++ A GL
Sbjct: 227 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGL 286

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM +K L PD   +T LIDG  K+G++       K M++  I       +++I GL +
Sbjct: 287 IDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQ 346

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+   Y  II   C  G + K SKL  +M+ +   P
Sbjct: 347 EGRPVDAEKMLREMLSVG----LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 402

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 403 SVXTYNVLMNG 413



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 200/414 (48%), Gaps = 22/414 (5%)

Query: 157 YTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNALMDG 198
           Y  +IH LC      EA+S+ +   S +  G                  ++Y ++ L+  
Sbjct: 4   YCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITA 63

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           Y +   +  A+E Y     H L     T   +++ L K+   +    F+  + + G   +
Sbjct: 64  YLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPAS 123

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           ++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+    L  
Sbjct: 124 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 183

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG CK G
Sbjct: 184 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D AM +Y +M+ +SL+PD++ +  LI GL K G++ +   L  EM    + P  FT +
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI G  K G +  A     E   +        + V Y AII  LC +G+ + A K+  +
Sbjct: 304 TLIDGCCKEGDLDAA----FEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLRE 359

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           M S  L+PD  TYT ++    +   +     LL +M + G VP      V++ G
Sbjct: 360 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 114 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 173

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 174 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNG 229

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDE 289

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD      ++ G  + GDL +AF
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDAAF 319


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 234/477 (49%), Gaps = 7/477 (1%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           CN+LL   +  G     +  +++ ++     D  TYG LI   C    + +A+NL  EM 
Sbjct: 20  CNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMK 79

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
             GI PT+V +  LI  LC  N   +A  +F  M +  V P+ + Y  ++   CK+  ++
Sbjct: 80  AAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLD 139

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A  ++  M+     P+ VT+ VL+  L K  +       F  M   G  P +  Y  ++
Sbjct: 140 LAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVV 199

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+CKAG + +A+SL   ++    SP    Y+ LI GLC   + + A  L +     G +
Sbjct: 200 NGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDV 257

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            +V+ Y S I G CK G +++A +V  +M E G  P+ V+++ +I   CK   +  A  L
Sbjct: 258 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKEL 317

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE-AKITPSVFTVSSLIHGLF 445
             + + +  +P V V T L+DGL K   ++E   + + MLE     PSV T S++I GL 
Sbjct: 318 MDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLC 377

Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
           K  R+ +A    L+K  +     C P+ V Y AII A C  G++ +A +LF  M      
Sbjct: 378 KADRLDDAY-VVLQKMRRAG---CVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433

Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            D   Y  ++RG  RA ++ + + ++ +M   GI P+ V    +V G  +   ++ A
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 228/484 (47%), Gaps = 18/484 (3%)

Query: 32  HHVCYSVF-NALNSLEIPKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQ 85
           H   Y VF + L +L    F P  F+  TLI  F +   I +A+ +  +++   + P I 
Sbjct: 33  HREAYRVFKDELVTL----FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIV 88

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
              +L+  L +    D   + + +M+   +  D   Y V+I   C    +  A + F+ M
Sbjct: 89  TFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERM 148

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV 205
           +  G  P  V YT+L+H L    K  +   +F  M   G  P L TY  +++GYCK   +
Sbjct: 149 VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRI 208

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           ++AL     +      P+   +  L+DGLCK      A   F   A  G   ++ VY   
Sbjct: 209 DQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIVYTSF 266

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           I G CKAG L EA ++  +M +   +PD  +YN++I  LC   ++  A+ L+ +  +   
Sbjct: 267 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 326

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE-PNVVTFSSLIDGQCKAGNIDAAM 384
           +  V     L+DG CK   +E+A  +  +M E G   P+VVT+S++IDG CKA  +D A 
Sbjct: 327 MPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAY 386

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            +  +M     VPDVV +TA+ID   K G + E   L++ M E      V   + LI G 
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY 446

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
            +  ++  A+    E      G    PN V  + I+  LC + ++ +A  L   M  ++L
Sbjct: 447 CRAAKVDEAIAMIEEMA----GRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL 502

Query: 505 RPDN 508
            PD+
Sbjct: 503 -PDS 505



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 187/413 (45%), Gaps = 38/413 (9%)

Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAA 243
           G   N YT N+L++ +        A   + + L    +P+  T+G L+ G CK  ++  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 244 GNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKG 303
            N    M   G+ P I  +  LI   C+     +A+ +  +M   ++ PD F Y ++I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 304 LCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
           LC + +L+ A    ++M + G L + VTY  L+    K    E+   +  +M  KG  P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 364 VVTFSSLIDGQCKAGNIDAAMGLYTEM--------------VIKSL-------------- 395
           +VT++++++G CKAG ID A+ L   +              +I  L              
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 396 -----VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
                V DV+V+T+ I GL K G + E   ++ +M+EA   P   + + +I+ L K+ R+
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR-PDNC 509
           S A     +  ++     C P   +   ++  LC   ++ +A  +   M     R P   
Sbjct: 312 SEAKELMDQAMERK----CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVV 367

Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           TY+ ++ GL +A R+ D  ++L  M + G VPD V    ++  + + G L  A
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 420



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 6/300 (2%)

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
           A+ G   N +  N L++     G   EA  +  +       PD FTY  LI+G C   Q+
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
             A  LL +M   GI   +VT+ SLI   C+    +KAL +  QM +  V+P+   ++ +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   CK   +D A   +  MV    +PD V +T L+  L K    ++  ++++EML    
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
           +P + T +++++G  K GRI  AL+       +  G   SP+  LY+ +I  LC   +  
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLM----RRLKGTGRSPSGSLYSTLIDGLCKHDRHD 244

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A +LF +M + +++ D   YT+ + GL +A ++ +   +   MI+ G  PD V   V++
Sbjct: 245 EARELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 4/212 (1%)

Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           G + N  T +SL++     G    A  ++ + ++    PD   +  LI G  K   + + 
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
           + L  EM  A ITP++ T  SLI  L +      AL  F +  D        P+  LY  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK----VKPDAFLYTV 127

Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
           +I  LC   ++  A+  F  M      PD  TYT ++  L +A +      +  +M+  G
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187

Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
             P+ V    +V GY + G +  A      LK
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRLK 219


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 231/482 (47%), Gaps = 8/482 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +     L+ GL K+G+        +EM   G+V  V TY  +ID  C  G +  AL +
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI 345

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
              M   G  P    Y  LIHGLC   K  EAE +       G  P + T+  +++GYCK
Sbjct: 346 KTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCK 404

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++ AL     M+    + ++  +GVL+  L K   L+ A +    +   G+ PN+ +
Sbjct: 405 AEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVI 464

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  +ID +CK G +  A+ +    E     P+ +TY+ LI GL    +L  A  L+ KM 
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           ++GI   V+TY +LI G CK+ + + A  +   M + G+ P+   ++ L D  CK+G  +
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
            A   Y+ +V K +V   V +T+L+DG SK GN +    L ++M+         T S L+
Sbjct: 585 EA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLL 641

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L K  +++ AL+   + T +   G    N V Y  II  +  +G+   A  +F++M S
Sbjct: 642 QALCKQKKLNEALSILDQMTLRGVKG----NIVAYTIIISEMIKEGKHDHAKSMFNEMIS 697

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
              +P   TYT  +    +  R+ +   L+ +M + G+ PD V   V + G    G +  
Sbjct: 698 SGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDC 757

Query: 562 AF 563
           AF
Sbjct: 758 AF 759



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 230/475 (48%), Gaps = 8/475 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L  L++    + + + Y ++V  GL+ D VTY  +I   C +G +  A   F  + +
Sbjct: 152 NLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRE 211

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G+E        L+ G C    + +A  +   M   G   N Y+Y  L+ G C+   V  
Sbjct: 212 SGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVRE 271

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL     ML     PN+ T+ +L+ GLCK G +  A      M + GV P+++ YN +ID
Sbjct: 272 ALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMID 331

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G+CK+G L +A+ + + ME    +PD +TYN LI GLCG G+ + AE LL      G   
Sbjct: 332 GYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSP 390

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
            V+T+ ++I+GYCK   ++ AL V S M     + ++  +  LI    K   +  A    
Sbjct: 391 TVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL 450

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            E+    L P+VV++T++ID   K G +   L ++K        P+ +T SSLI+GL ++
Sbjct: 451 NEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQD 510

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            ++  A+    +  +  DG   +P  + Y  +IQ  C   +   A +LF  M  + L PD
Sbjct: 511 QKLHKAMALITKMQE--DG--ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
              Y  +   L ++ R  +    L   +K G+V   V    +V G+ + G+ + A
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFA 618



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 212/423 (50%), Gaps = 5/423 (1%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
           L+ +++ +G+ P  V Y  +I   C E  +  A   FR +RE G+  + YT NAL+ GYC
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +  D+ +A      M     + N  ++ +L+ GLC+   +R A    + M + G  PN+ 
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LI G CK G + +A  L  EM +  + P V+TYN +I G C  G+L+ A G+   M
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   +  TYNSLI G C  G  ++A  + +    +G  P V+TF+++I+G CKA  I
Sbjct: 350 EGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKI 408

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
           D A+ + + M+      D+  +  LI  L K   +KE      E+    ++P+V   +S+
Sbjct: 409 DDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSI 468

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I    K G++  AL  F  K  + +G  C PN   Y+++I  L  D ++ KA  L + M+
Sbjct: 469 IDAYCKVGKVGAALEVF--KLTEHEG--CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
            D + P   TYTT+++G  +     +   L   M + G+ PD     V+     ++G  +
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584

Query: 561 SAF 563
            A+
Sbjct: 585 EAY 587



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 245/540 (45%), Gaps = 24/540 (4%)

Query: 42  LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPA----IQACNALLNGLI 95
           LN      F+P+V  F+ +I  + +   I++AL V + I +       +QA   L++ LI
Sbjct: 380 LNGAIARGFSPTVITFTNIINGYCKAEKIDDALRV-KSIMISSKCKLDLQAYGVLISVLI 438

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           KK +     +   E+   GL  +VV Y  +ID  C  G V  AL +F     +G  P   
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y+ LI+GL  + K+ +A ++   M+E G+ P + TY  L+ G CK  + + A   +  M
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 558

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
             + L P+   + VL D LCK G    A +F V   K GV      Y  L+DG  KAGN 
Sbjct: 559 EQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGNT 615

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A +L  +M       D  TY++L++ LC   +L  A  +L +M   G+  N+V Y  +
Sbjct: 616 EFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTII 675

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I    KEG  + A S+ ++M   G +P+ +T++  I   CK G I+ A  L  EM    +
Sbjct: 676 ISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGV 735

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA-- 453
            PDVV +   I+G    G M       K M++A   P+ +T   L+    K   ++NA  
Sbjct: 736 APDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS-LANAHY 794

Query: 454 -----------LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
                      L+   +  ++      +P  V Y++II   C   ++ +A  L   M   
Sbjct: 795 VDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           ++ P+   YT +++     K        + +MI+ G  P       ++ G  + GD   A
Sbjct: 855 DISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKA 914



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 208/403 (51%), Gaps = 5/403 (1%)

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
           ++  + + G++P+  TYN ++  YCK   +  A  ++  +    ++ +  T   L+ G C
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           + G+LR A    + M   G   N + Y  LI G C+   + EA+ L   M +   SP++ 
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY +LI+GLC  G++  A  LL +M + G++ +V TYN++IDGYCK G ++ AL + + M
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G  P+  T++SLI G C  G  D A  L    + +   P V+ FT +I+G  K   +
Sbjct: 350 EGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKI 408

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            + LR+   M+ +K    +     LI  L K  R+  A +      ++      SPN V+
Sbjct: 409 DDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL----NEIFANGLSPNVVI 464

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +II A C  G++  A ++F     +  RP+  TY++++ GL++ +++   M L+  M 
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
           + GI P  +    +++G  +  +  +AFR  E ++++ +   E
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 189/416 (45%), Gaps = 22/416 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI    +    + A  ++  +E   + P  QA N L + L K G+ +  + F   +
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---L 590

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           V  G+V   VTY  L+D     G+   A  L ++M+++G +     Y++L+  LC + K+
Sbjct: 591 VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL 650

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA S+   M   GV  N+  Y  ++    K    + A   ++EM+    +P+ +T+ V 
Sbjct: 651 NEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVF 710

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +   CK+G +  AG+    M + GV P++  YN  I+G    G +  A S    M     
Sbjct: 711 ISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASC 770

Query: 291 SPDVFTYNILIK----------------GLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
            P+ +TY +L+K                G+    +L+    LL++M K G+    VTY+S
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           +I G+CK   +E+A  +   M  K + PN   ++ LI   C     + A    T M+   
Sbjct: 831 IIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG 890

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
             P +  +  LI GL  +G+  +   L+ ++LE     +      L  GL K G +
Sbjct: 891 FQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 193/444 (43%), Gaps = 30/444 (6%)

Query: 1   IFYVLANAKLYKNARCLIKDVTEN-----------LLKSRKPHHVCYSVFNALNSLEIPK 49
           I+ ++ + KL+K A  LI  + E+           L++ +   H   + F     +E   
Sbjct: 504 IYGLIQDQKLHK-AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNG 562

Query: 50  FNP--SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
             P    ++ L  A  + G  EEA     K  V+       +L++G  K G  +      
Sbjct: 563 LTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALI 622

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+MV  G  AD  TY VL+   C Q  + +AL++ D+M  +G++  +V YTI+I  +  E
Sbjct: 623 EKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKE 682

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K   A+SMF  M   G  P+  TY   +  YCK+  +  A     EM  + + P+VVT+
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTY 742

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG-------------- 273
            V ++G   +G +  A +    M      PN + Y  L+    K                
Sbjct: 743 NVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWN 802

Query: 274 --NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
              L     L   M K  ++P   TY+ +I G C   +LE A  LL  M  + I  N   
Sbjct: 803 WIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEI 862

Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           Y  LI   C     EKA S  + M E G +P++ ++  LI G C  G+ D A  L+ +++
Sbjct: 863 YTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLL 922

Query: 392 IKSLVPDVVVFTALIDGLSKDGNM 415
                 + V +  L DGL K G++
Sbjct: 923 EMDYNHNEVAWKILNDGLLKAGHV 946


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 233/487 (47%), Gaps = 8/487 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           V   ++  FSE+G + EA+ +   ++   + P+    N +L   ++ G  +     ++EM
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
            + G+V D  +Y +++  C   G + +A      MI +G  P     T+++  LC    +
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
             A   FR M + G  PNL  + +L+DG CK   + +A E   EM+ +  +PNV T   L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           +DGLCK G    A   F+ + +   + PN+  Y  +I G+CK   L  A  L S M++  
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           + P+V TY  LI G C  G    A  L+  M  EG + N+ TYN+ ID  CK+    +A 
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            + ++    G+E + VT++ LI  QCK  +I+ A+  +  M       D+ +   LI   
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            +   MKE+ RL++ ++   + P+  T +S+I    K G I  AL +F     K  G  C
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF--HNMKRHG--C 564

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
            P+   Y ++I  LC    + +A KL+  M    L P   T  T+     +     + M+
Sbjct: 565 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 624

Query: 530 LLADMIK 536
           LL  + K
Sbjct: 625 LLEPLDK 631



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 206/437 (47%), Gaps = 12/437 (2%)

Query: 57  TLII-AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           TLI+ A  E G +  A+W +RK+  L   P +    +L++GL KKG     +E  EEMV 
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315

Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMV 171
            G   +V T+  LID  C +G   KA  LF +++     +P V  YT +I G C E+K+ 
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
            AE +F  M+E G+ PN+ TY  L++G+CK     RA E  + M      PN+ T+   +
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
           D LCK      A          G+  +   Y  LI   CK  ++ +A++    M K    
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
            D+   NILI   C   +++ +E L Q +   G++    TY S+I  YCKEGD++ AL  
Sbjct: 496 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 555

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
              M   G  P+  T+ SLI G CK   +D A  LY  M+ + L P  V    L     K
Sbjct: 556 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
             +    + L  E L+ K+   + TV +L+  L    ++  A  FF +  +K      S 
Sbjct: 616 RNDSANAMILL-EPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS----SA 668

Query: 472 NHVLYAAIIQALCYDGQ 488
           + V  AA   A    G+
Sbjct: 669 DRVTLAAFTTACSESGK 685



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++  + ++  +N A+    +M +  L P+ +T   +++   ++G +  A N F  M+  G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           V P+   Y  ++ G  + G + EA    + M +    PD  T  +++  LC  G +  A 
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
              +KM   G   N++ + SLIDG CK+G +++A  +  +M   G +PNV T ++LIDG 
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 375 CKAGNIDAAMGLYTEMVIK-SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           CK G  + A  L+ ++V   +  P+V  +T++I G  K+  +     L+  M E  + P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           V T ++LI+G  K G    A           D G+  PN   Y A I +LC   +  +A 
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELM---NLMGDEGF-MPNIYTYNAAIDSLCKKSRAPEAY 448

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
           +L +   S  L  D  TYT +++   +   +   +     M K G   D  +N +++  +
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508

Query: 554 QENGDLKSAFR 564
                +K + R
Sbjct: 509 CRQKKMKESER 519



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 181/397 (45%), Gaps = 5/397 (1%)

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
           ++ EA  M   M+  G+ P+  T N +++   ++  +  A   + EM    + P+  ++ 
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
           +++ G  + G+++ A  +   M + G  P+      ++   C+ G +  A+    +M   
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P++  +  LI GLC  G ++ A  +L++M + G   NV T+ +LIDG CK G  EKA
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341

Query: 349 LSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
             +  ++      +PNV T++S+I G CK   ++ A  L++ M  + L P+V  +T LI+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
           G  K G+      L   M +    P+++T ++ I  L K  R   A     E  +K    
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY----ELLNKAFSC 457

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
               + V Y  +IQ  C    I +A   F  M       D      ++    R K+M + 
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             L   ++ +G++P       M+  Y + GD+  A +
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 5/346 (1%)

Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
           NLQ        ++    ++G L  A    + M   G+ P+    NC+++   + G +  A
Sbjct: 142 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 201

Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
            ++  EM    + PD  +Y +++ G    G+++ A+  L  M + G + +  T   ++  
Sbjct: 202 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 261

Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
            C+ G + +A+    +M + G +PN++ F+SLIDG CK G+I  A  +  EMV     P+
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321

Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFF 457
           V   TALIDGL K G  ++  RL+ +++ +    P+V T +S+I G  K  +++ A   F
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 381

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                K  G +  PN   Y  +I   C  G   +A +L + M  +   P+  TY   +  
Sbjct: 382 SRM--KEQGLF--PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           L +  R  +   LL      G+  D V   ++++   +  D+  A 
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 7/171 (4%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           V   ++   S+ G + E + +  +M    +TPS  T++ ++    + G I  A N F E 
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           + +       P+   Y  ++     DG+I +A +  + M      PDN T T +L  L  
Sbjct: 209 SVRG----VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCE 264

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
              +   +     MI +G  P+ +    ++ G  + G +K AF   E L+E
Sbjct: 265 NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF---EMLEE 312


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 258/554 (46%), Gaps = 50/554 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI    + G ++ A  + +K+      P +    AL++GL K  +     +  + M
Sbjct: 12  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +  G   D+VTY  LI   C    +  A  +  E++  G  P  + Y+ L+   C   ++
Sbjct: 72  LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131

Query: 171 VEAESMFRSM----------------------------REC---------GVVPNLYTYN 193
            +A  + R M                             EC         G +P++ TYN
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYN 191

Query: 194 ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKF 253
             + G CK   +++ LE   EM    + P+VVTF  ++ GLCK   +  A   F  M + 
Sbjct: 192 TFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 251

Query: 254 GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS--PDVFTYNILIKGLCGVGQLE 311
           G  P+   Y+ ++D   +A  L     +   M+  +     +V+T+N  I  LC  G+  
Sbjct: 252 GCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFP 311

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG-VEPNVVTFSSL 370
            A+ +L  M + G L N+++YN +IDG CK G+++ A  +  +M + G  +P+V+ F++L
Sbjct: 312 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 371

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           I G CKAG +  A  L  EM  K++ VPDVV +  LIDG SK G++K+   L +EM    
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
             P+V T ++LI+G  K+G    A + F E + K     C P+ + Y  ++ A    G +
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKG----CFPDIITYNTVLSAFSKAGMM 487

Query: 490 LKASKLFSDMRSDN--LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            KA  ++  +++      PD  TY  ++ G  RA+     + LL +M   G   D+    
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYN 547

Query: 548 VMVRGYQENGDLKS 561
           V++    E  ++ S
Sbjct: 548 VLIAKLAETEEVPS 561



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 245/522 (46%), Gaps = 42/522 (8%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N+L++GL    + D      +E+V  G   + +TY  L+   C +  + +A  L
Sbjct: 78  PDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGL 137

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS---MRECGVVPNLYTYNALMDG 198
             EMI +G    +V+Y   I G C E +   +    R    M E G +P++ TYN  + G
Sbjct: 138 IREMILRGSVCNLVVYIDCIFGFC-EARCQSSRYECRDGDEMIESGRIPDVVTYNTFISG 196

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   +++ LE   EM    + P+VVTF  ++ GLCK   +  A   F  M + G  P+
Sbjct: 197 LCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPD 256

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS--PDVFTYNILIKGLCGVGQLEGAEGL 316
              Y+ ++D   +A  L     +   M+  +     +V+T+N  I  LC  G+   A+ +
Sbjct: 257 SLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNI 316

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQC 375
           L  M + G L N+++YN +IDG CK G+++ A  +  +M + G  +P+V+ F++LI G C
Sbjct: 317 LLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC 376

Query: 376 KAGNIDAAMGLYTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           KAG +  A  L  EM  K++ VPDVV +  LIDG SK G++K+   L +EM      P+V
Sbjct: 377 KAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNV 436

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKT------------------------DKTDG---- 466
            T ++LI+G  K+G    A + F E +                         K +G    
Sbjct: 437 VTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQ 496

Query: 467 -----GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
                 YCSP+ + Y  +I   C      +   L  +M +     D+ TY  ++  L   
Sbjct: 497 LKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAET 556

Query: 522 KRMLD-VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           + +    + +   M+    VP A I   +VR +   GD+ SA
Sbjct: 557 EEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSA 598



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 217/454 (47%), Gaps = 10/454 (2%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           M   G  A VVTY  LID  C  GD+  A  L  +M D G  P VV YT LI GLC   +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
             +A    + M   G  P+L TYN+L+ G C    ++ A     E++ +   PN +T+  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA---GNLFEAMSLCSEME 286
           L+   C+   L  A      M   G   N+ VY   I G C+A    + +E       +E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PDV TYN  I GLC  G+L+    +L++M + GI  +VVT+ S+I G CK   ++
Sbjct: 181 SGRI-PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM--VIKSLVPDVVVFTA 404
            A  V   M E+G  P+ +T+S ++D   +A  +D    +   M  +    V +V    A
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
            I  L + G       +   M+E+   P++ + + +I GL K+G + +A           
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKL---SRKML 356

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL-RPDNCTYTTMLRGLLRAKR 523
           D G C P+ + +  +I   C  G++ +A +L  +M++ N+  PD  TY T++ G  +   
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           +    +LL +M  +G  P+ V    ++ GY ++G
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHG 450



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 216/426 (50%), Gaps = 11/426 (2%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           +P +   N  ++GL K GK D   E  EEM   G+  DVVT+  +I   C    +  A  
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR--ECGVVPNLYTYNALMDG 198
           +F  M+++G  P  + Y+I++  L   N++   + +   M+  + G V  +YT+NA +  
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-P 257
            C+      A      M+     PN++++  ++DGLCK G +  A      M   G   P
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILIKGLCGVGQLEGAEGL 316
           ++  +N LI G CKAG L +A  L  EM+   I  PDV TYN LI G    G L+ A+ L
Sbjct: 364 DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLL 423

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           LQ+M   G   NVVTY +LI+GY K G  E+A S+  +M+ KG  P+++T+++++    K
Sbjct: 424 LQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483

Query: 377 AGNIDAAMGLYTEMVIKS--LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           AG +  A G+Y ++  K+    PD + +  LIDG  +  + ++ L L +EM     +   
Sbjct: 484 AGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDS 543

Query: 435 FTVSSLIHGLFKNGRI-SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
           +T + LI  L +   + S AL  + +  D+     C P+  ++ ++++     G +  A 
Sbjct: 544 YTYNVLIAKLAETEEVPSKALAVYQQMLDQD----CVPSASIFNSLVRLFLRTGDVNSAR 599

Query: 494 KLFSDM 499
            +  +M
Sbjct: 600 SMVQEM 605



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 208/426 (48%), Gaps = 14/426 (3%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M   G + +VV YT LI GLC    +  A+++ + M + G  PN+ TY AL+DG CK   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
            + A++    ML    +P++VT+  L+ GLC    +  AG     + + G  PN   Y+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV----GQLEGAEGLLQKM 320
           L+  +C+   L +A  L  EM       ++  Y   I G C       + E  +G   +M
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG--DEM 178

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
            + G + +VVTYN+ I G CK G ++K L +  +M   G+ P+VVTF S+I G CKA  I
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM--LEAKITPSVFTVS 438
           D A  ++  M+ +  VPD + ++ ++D LS+   +     + + M  ++A     V+T +
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           + I  L ++G+   A N  L   +        PN + Y  +I  LC  G +  A KL   
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGS----LPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 499 M-RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI-VPDAVINQVMVRGYQEN 556
           M  S   +PD   + T++ G  +A R+     LL +M    I VPD V    ++ G  + 
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 557 GDLKSA 562
           G LK A
Sbjct: 415 GSLKQA 420



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 178/388 (45%), Gaps = 40/388 (10%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M  +    +VVT+  L+DGLCK G+L AA      MA  G  PN+  Y  LIDG CKA  
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
             +A+     M +    PD+ TYN LI GLC   +++ A  +LQ++ + G   N +TY++
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 335 LIDGYCKEGDMEKAL----------SVCS---------------------------QMTE 357
           L+   C+   +++A           SVC+                           +M E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
            G  P+VVT+++ I G CKAG +D  + +  EM    + PDVV F ++I GL K   + +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
             +++K MLE    P   T S ++  L +  R+ + ++  LE       G C      + 
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL-DTVDEVLEHMQAMKAG-CVMEVYTHN 298

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
           A I ALC  G+   A  +   M      P+  +Y  ++ GL ++  + D   L   M+  
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 538 GIV-PDAVINQVMVRGYQENGDLKSAFR 564
           G   PD +    ++ G+ + G L  A +
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQ 386



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 159/323 (49%), Gaps = 5/323 (1%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           NA +  L + GKF         M+  G + ++++Y  +ID  C  G+V  A  L  +M+D
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 148 KGI-EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV-VPNLYTYNALMDGYCKVADV 205
            G  +P V+ +  LI G C   ++ +A  +   M+   + VP++ TYN L+DG  K   +
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            +A     EM     +PNVVT+  L++G  K G    A + F  M+  G FP+I  YN +
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
           +    KAG + +A  +  +++      SPD  TY ILI G C     E    LLQ+M   
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTAR 537

Query: 324 GILANVVTYNSLIDGYCKEGDM-EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           G   +  TYN LI    +  ++  KAL+V  QM ++   P+   F+SL+    + G++++
Sbjct: 538 GWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNS 597

Query: 383 AMGLYTEMVIKSLVPDVVVFTAL 405
           A  +  EM  K  + D     AL
Sbjct: 598 ARSMVQEMNEKGHLVDASNLEAL 620



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 34/305 (11%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G  A+VVTY +LIDG CK GD++ A ++  +M + G  PNVVT+++LIDG CKA  
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A+     M+     PD+V + +LI GL     M +   + +E++     P+  T S+
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDG-----------GYCS------------------ 470
           L+    +  R+  A     E   +              G+C                   
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 471 ----PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
               P+ V Y   I  LC  G++ K  ++  +M    + PD  T+ +++ GL +A R+ D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
              +   M++ G VPD++   +M+        L +     E ++  + G    E +T  +
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCV-MEVYTHNA 299

Query: 587 FLGHL 591
           F+G L
Sbjct: 300 FIGAL 304


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 219/442 (49%), Gaps = 48/442 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 19  MIHFLCTHQMLPEAKTLIQIVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73

Query: 60  IAFSEMGHIEEALWVYR-----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
            A+ E G + +A+  YR     K  V      C  +L  L+K   F  VW FYEE + CG
Sbjct: 74  TAYLESGFLRDAIECYRLTKEHKFRV--PFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
             A                                   ++  + IL+H  C E ++  A+
Sbjct: 132 YPA-----------------------------------SLYFFNILMHSFCKEGEIRLAQ 156

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           S+F ++ + G+ P++ ++N LM+GY K+ D+N      + M    +QP+V T+ VL++GL
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  +L  A   F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+
Sbjct: 217 CKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDL 276

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN LI GLC  G L+ A+ L+ +M  +G+  + +TY +LIDG CKEGD+E A     +
Sbjct: 277 ITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKR 336

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ +  + V +++LI G C+ G    A  +  EM+   L P++  +T +I+   K G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 415 MKETLRLYKEMLEAKITPSVFT 436
           +    +L KEM      PSV T
Sbjct: 397 VWTGSKLMKEMQRDGYVPSVVT 418



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 161/300 (53%), Gaps = 4/300 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY E L      ++  F +LM   CK GE+R A + F  + K+G+ P++  +N L++G+ 
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G+L E   L + M+   + PDV+TY++LI GLC   +L+ A  L  +M   G++ N V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           ++ +LIDG+CK+G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L  EM
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +K L PD + +T LIDG  K+G+++      K M++  I       ++LI GL + GR 
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A     E           P    Y  II   C  G +   SKL  +M+ D   P   T
Sbjct: 363 VDAEKMLREMLSVG----LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 28/413 (6%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+++ +   S +  G                  ++Y ++ 
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H  +    T   +++ L K+   +    F+    + G
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G +  A S+   + K+ + P V ++N L+ G   +G L    
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +V TY+ LI+G CKE  ++ A  +  +M + G+ PN V+F++LIDG 
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGH 251

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL K+G++K+   L  EM    + P  
Sbjct: 252 CKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDK 311

Query: 435 FTVSSLIHGLFKNGRISNALNF---FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            T ++LI G  K G +  A  +    +++  + D        V Y A+I  LC +G+ + 
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD-------DVAYTALISGLCQEGRSVD 364

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           A K+  +M S  L+P+  TYT ++    +   +     L+ +M + G VP  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 4/207 (1%)

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E G   ++  F+ L+   CK G I  A  ++  +    L P VV F  L++G  K G++ 
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  RL   M  + + P V+T S LI+GL K  ++ +A   F E  D        PN V +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNG----LVPNSVSF 244

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I   C DG++  A +++  M S +L PD  TY T++ GL +   +     L+ +M  
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
            G+ PD +    ++ G  + GDL++AF
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAF 331


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 222/447 (49%), Gaps = 44/447 (9%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 8   MIHFLCTHQMLSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 62

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +       C  +L  ++K   F  VW FYEE++ CG  
Sbjct: 63  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYP 122

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C E  +  A+S+
Sbjct: 123 A-----------------------------------SLYFFNILMHRFCKEGDIRVAQSV 147

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ ++N LM+GY ++ D++        M    +QP+V T+ VL++GLCK
Sbjct: 148 FNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCK 207

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK+G +  AM +  +M    +SPD+ T
Sbjct: 208 ESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLIT 267

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  + +TY +LIDG CKEGD+E A     +M 
Sbjct: 268 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMI 327

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD   +T +I+   K G++ 
Sbjct: 328 QENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVW 387

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHG 443
              +L KEM      PSV T + L++G
Sbjct: 388 TGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 189/371 (50%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE        T   +++   K+    
Sbjct: 48  KGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFK 107

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  +N L+
Sbjct: 108 LVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLM 167

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++
Sbjct: 168 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 227

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L
Sbjct: 228 PNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL 287

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM +K L PD + +T LIDG  K+G+++      K M++  I       ++LI GL +
Sbjct: 288 IDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQ 347

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+   Y  II   C  G +   SKL  +M+ D   P
Sbjct: 348 EGRYLDAEKVLREMLSAG----LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 404 SVVTYNVLMNG 414



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 206/418 (49%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 1   TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H       T   +++ + K+   +    F+  + + G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+ + + K+ + P V ++N L+ G   +G L+   
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M+  G+  +V TY+ LI+G CKE  M+ A  +  +M +KG+ PN VTF++LIDG 
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK+G +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G +  A     E   +        + V Y A+I  LC +G+ L A K
Sbjct: 301 ITYTTLIDGCCKEGDLETA----FEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEK 356

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 357 VLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV F  L++G  + G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 174

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K  ++ +A   F E  DK       PN 
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG----LVPNG 230

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C  G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 231 VTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 290

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD +    ++ G  + GDL++AF
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAF 320


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 233/487 (47%), Gaps = 8/487 (1%)

Query: 54   VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            V   ++  FSE+G + EA+ +   ++   + P+    N +L   ++ G  +     ++EM
Sbjct: 750  VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 809

Query: 111  VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
             + G+V D  +Y +++  C   G + +A      MI +G  P     T+++  LC    +
Sbjct: 810  SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 869

Query: 171  VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
              A   FR M + G  PNL  + +L+DG CK   + +A E   EM+ +  +PNV T   L
Sbjct: 870  NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 929

Query: 231  MDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
            +DGLCK G    A   F+ + +   + PN+  Y  +I G+CK   L  A  L S M++  
Sbjct: 930  IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 989

Query: 290  ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
            + P+V TY  LI G C  G    A  L+  M  EG + N+ TYN+ ID  CK+    +A 
Sbjct: 990  LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 1049

Query: 350  SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
             + ++    G+E + VT++ LI  QCK  +I+ A+  +  M       D+ +   LI   
Sbjct: 1050 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 1109

Query: 410  SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
             +   MKE+ RL++ ++   + P+  T +S+I    K G I  AL +F     K  G  C
Sbjct: 1110 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF--HNMKRHG--C 1165

Query: 470  SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             P+   Y ++I  LC    + +A KL+  M    L P   T  T+     +     + M+
Sbjct: 1166 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 1225

Query: 530  LLADMIK 536
            LL  + K
Sbjct: 1226 LLEPLDK 1232



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 206/437 (47%), Gaps = 12/437 (2%)

Query: 57   TLII-AFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
            TLI+ A  E G +  A+W +RK+  L   P +    +L++GL KKG     +E  EEMV 
Sbjct: 857  TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 916

Query: 113  CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMV 171
             G   +V T+  LID  C +G   KA  LF +++     +P V  YT +I G C E+K+ 
Sbjct: 917  NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 976

Query: 172  EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
             AE +F  M+E G+ PN+ TY  L++G+CK     RA E  + M      PN+ T+   +
Sbjct: 977  RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 1036

Query: 232  DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
            D LCK      A          G+  +   Y  LI   CK  ++ +A++    M K    
Sbjct: 1037 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 1096

Query: 292  PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
             D+   NILI   C   +++ +E L Q +   G++    TY S+I  YCKEGD++ AL  
Sbjct: 1097 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 1156

Query: 352  CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
               M   G  P+  T+ SLI G CK   +D A  LY  M+ + L P  V    L     K
Sbjct: 1157 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 1216

Query: 412  DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
              +    + L  E L+ K+   + TV +L+  L    ++  A  FF +  +K      S 
Sbjct: 1217 RNDSANAMILL-EPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKD----SSA 1269

Query: 472  NHVLYAAIIQALCYDGQ 488
            + V  AA   A    G+
Sbjct: 1270 DRVTLAAFTTACSESGK 1286



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 195  LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
            ++  + ++  +N A+    +M +  L P+ +T   +++   ++G +  A N F  M+  G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 255  VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            V P+   Y  ++ G  + G + EA    + M +    PD  T  +++  LC  G +  A 
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 315  GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
               +KM   G   N++ + SLIDG CK+G +++A  +  +M   G +PNV T ++LIDG 
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 375  CKAGNIDAAMGLYTEMVIK-SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
            CK G  + A  L+ ++V   +  P+V  +T++I G  K+  +     L+  M E  + P+
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 434  VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
            V T ++LI+G  K G    A           D G+  PN   Y A I +LC   +  +A 
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELM---NLMGDEGFM-PNIYTYNAAIDSLCKKSRAPEAY 1049

Query: 494  KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
            +L +   S  L  D  TYT +++   +   +   +     M K G   D  +N +++  +
Sbjct: 1050 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 1109

Query: 554  QENGDLKSAFR 564
                 +K + R
Sbjct: 1110 CRQKKMKESER 1120



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 181/397 (45%), Gaps = 5/397 (1%)

Query: 169  KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            ++ EA  M   M+  G+ P+  T N +++   ++  +  A   + EM    + P+  ++ 
Sbjct: 763  RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 822

Query: 229  VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            +++ G  + G+++ A  +   M + G  P+      ++   C+ G +  A+    +M   
Sbjct: 823  LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 882

Query: 289  EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
               P++  +  LI GLC  G ++ A  +L++M + G   NV T+ +LIDG CK G  EKA
Sbjct: 883  GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 942

Query: 349  LSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
              +  ++      +PNV T++S+I G CK   ++ A  L++ M  + L P+V  +T LI+
Sbjct: 943  FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 1002

Query: 408  GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            G  K G+      L   M +    P+++T ++ I  L K  R   A     E  +K    
Sbjct: 1003 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY----ELLNKAFSC 1058

Query: 468  YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
                + V Y  +IQ  C    I +A   F  M       D      ++    R K+M + 
Sbjct: 1059 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118

Query: 528  MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
              L   ++ +G++P       M+  Y + GD+  A +
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 1155



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 5/346 (1%)

Query: 219  NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
            NLQ        ++    ++G L  A    + M   G+ P+    NC+++   + G +  A
Sbjct: 743  NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 802

Query: 279  MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
             ++  EM    + PD  +Y +++ G    G+++ A+  L  M + G + +  T   ++  
Sbjct: 803  ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 862

Query: 339  YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
             C+ G + +A+    +M + G +PN++ F+SLIDG CK G+I  A  +  EMV     P+
Sbjct: 863  LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922

Query: 399  VVVFTALIDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFF 457
            V   TALIDGL K G  ++  RL+ +++ +    P+V T +S+I G  K  +++ A   F
Sbjct: 923  VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 982

Query: 458  LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
                 K  G +  PN   Y  +I   C  G   +A +L + M  +   P+  TY   +  
Sbjct: 983  SRM--KEQGLF--PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 1038

Query: 518  LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            L +  R  +   LL      G+  D V   ++++   +  D+  A 
Sbjct: 1039 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 7/171 (4%)

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
           V   ++   S+ G + E + +  +M    +TPS  T++ ++    + G I  A N F E 
Sbjct: 750 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 809

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
           + +       P+   Y  ++     DG+I +A +  + M      PDN T T +L  L  
Sbjct: 810 SVRG----VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCE 865

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
              +   +     MI +G  P+ +    ++ G  + G +K AF   E L+E
Sbjct: 866 NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF---EMLEE 913


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 196/371 (52%), Gaps = 6/371 (1%)

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           +EC   P++ TY  L++  C  + V +A++   EM     +P+VVT+ VL++G+CK G L
Sbjct: 10  KEC--YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
             A  F   M  +G  PN+  +N ++   C  G   +A  L +EM +   SP V T+NIL
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
           I  LC  G L  A  +L+KM   G   N ++YN L+ G+CKE  M++A+     M  +G 
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
            P++VT+++++   CK G +DAA+ L  ++  K   P ++ +  +IDGLSK G   + + 
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
           L  EM    + P V T SSLI GL + G++  A+ FF +     +G    PN   Y +I+
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD----VEGFGVKPNAFTYNSIM 303

Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
             LC   Q  +A    + M S   +P   +YT ++ G+       + + LL ++   G+V
Sbjct: 304 FGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363

Query: 541 PDAVINQVMVR 551
             +   QV+VR
Sbjct: 364 KKSSAEQVVVR 374



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 199/363 (54%), Gaps = 4/363 (1%)

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           + + D  ++K   P V+ YTILI   C E+ + +A  +   M   G  P++ TYN L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            CK   ++ A++F + M  +  QPNV+T  +++  +C  G    A      M + G  P+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           +  +N LI+  C+ G L  A+ +  +M     +P+  +YN L+ G C   +++ A   L+
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M   G   ++VTYN+++   CK+G ++ A+ + +Q++ KG  P ++T++++IDG  K G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
             D A+ L  EM  K L PDV+ +++LI GLS++G ++E ++ + ++    + P+ FT +
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           S++ GL K  +   A++F      K     C P  V Y  +I+ +  +G   +A +L ++
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKG----CKPTEVSYTILIEGIANEGLAKEALELLNE 356

Query: 499 MRS 501
           + S
Sbjct: 357 LCS 359



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 182/347 (52%)

Query: 79  EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKA 138
           E  P +     L+     +       +  +EM   G   DVVTY VL++  C +G + +A
Sbjct: 11  ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
           +   + M   G +P V+ + I++  +C+  + ++AE +   M   G  P++ T+N L++ 
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
            C+   + RA++   +M  H   PN +++  L+ G CK  ++  A  +   M   G +P+
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           I  YN ++   CK G +  A+ L +++     SP + TYN +I GL  VG+ + A  LL 
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
           +M  +G+  +V+TY+SLI G  +EG +E+A+     +   GV+PN  T++S++ G CKA 
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQ 310

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
             D A+     M+ K   P  V +T LI+G++ +G  KE L L  E+
Sbjct: 311 QTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 184/363 (50%), Gaps = 7/363 (1%)

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           +E     L     P+V+T+ +L++  C    +  A      M   G  P++  YN L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CK G L EA+   + M  +   P+V T+NI+++ +C  G+   AE LL +M ++G   +
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVT+N LI+  C++G + +A+ +  +M   G  PN ++++ L+ G CK   +D A+    
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            MV +   PD+V +  ++  L KDG +   + L  ++     +P + T +++I GL K G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
           +   A+    E      G    P+ + Y+++I  L  +G++ +A K F D+    ++P+ 
Sbjct: 241 KTDQAVELLHE----MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296

Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
            TY +++ GL +A++    +  LA MI  G  P  V   +++ G    G  K A    E 
Sbjct: 297 FTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL---EL 353

Query: 569 LKE 571
           L E
Sbjct: 354 LNE 356



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +   N L+NG+ K+G+ D   +F   M   G   +V+T+ +++   C  G  M A  L
Sbjct: 49  PDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKL 108

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
             EM+ KG  P+VV + ILI+ LC +  +  A  +   M   G  PN  +YN L+ G+CK
Sbjct: 109 LTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              ++RA+++   M+     P++VT+  ++  LCK G++ AA      ++  G  P +  
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 228

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN +IDG  K G   +A+ L  EM    + PDV TY+ LI GL   G++E A      + 
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G+  N  TYNS++ G CK    ++A+   + M  KG +P  V+++ LI+G    G   
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348

Query: 382 AAMGLYTEMVIKSLV 396
            A+ L  E+  + +V
Sbjct: 349 EALELLNELCSRGVV 363



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +S+LI   S  G +EEA+  +  +E   V P     N+++ GL K  + D   +F   M
Sbjct: 263 TYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM 322

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           +  G     V+Y +LI+    +G   +AL L +E+  +G+
Sbjct: 323 ISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 222/449 (49%), Gaps = 48/449 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS +I
Sbjct: 23  MIHFLCTHQMLPEAKTLIQIVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGII 77

Query: 60  IAFSEMGHIEEALWVYR-----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
            A+ E G + +A+  YR     K  V      C  +L  L+K   F  VW FYEE + CG
Sbjct: 78  TAYLESGFLRDAIECYRLTKEHKFRV--PFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 135

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
             A                                   ++  + IL+H  C E ++  A+
Sbjct: 136 YPA-----------------------------------SLYFFNILMHSFCKEGEIRLAQ 160

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
           S+F ++ + G+ P++ ++N LM+GY K+ D+N        M    +QP+V T+ VL++GL
Sbjct: 161 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGL 220

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  ++      F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+
Sbjct: 221 CKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 280

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYN LI GLC  G L+ A+ L+ +M  +G+  + +TY +LIDG CKEGD+E A     +
Sbjct: 281 VTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXR 340

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++ +  + V +++LI G C+ G    A  +  EM+   L P++  +T +I+   K G+
Sbjct: 341 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 400

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHG 443
           +    +L KEM      PSV T + L++G
Sbjct: 401 VWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 4/307 (1%)

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
           FY E L      ++  F +LM   CK GE+R A + F  + K+G+ P++  +N L++G+ 
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
           K G+L E   L   M+   + PDV+TY++LI GLC   +++    L  +M   G++ N V
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
           T+ +LIDG+CK G ++ A+ +  QM  + + P++VT+++LI G CK G++  A  L  EM
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
            +K L PD + +T LIDG  K+G+++        M++  I       ++LI GL + GR 
Sbjct: 307 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRS 366

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A     E           P    Y  II   C  G +   SKL  +M+ D   P   T
Sbjct: 367 VDAEKMLREMLSVG----LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 422

Query: 511 YTTMLRG 517
           Y  ++ G
Sbjct: 423 YNVLMNG 429



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+++ +   S +  G                  ++Y ++ 
Sbjct: 16  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 75

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++  Y +   +  A+E Y     H  +    T   +++ L K+   +    F+    + G
Sbjct: 76  IITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 135

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G +  A S+   + K+ + P V ++N L+ G   +G L    
Sbjct: 136 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXF 195

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L + M   G+  +V TY+ LI+G CKE  M+    +  +M + G+ PN VTF++LIDG 
Sbjct: 196 RLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGH 255

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD+V +  LI GL K G++K+   L  EM    + P  
Sbjct: 256 CKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 315

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G +  A  +      +        + V Y A+I  LC +G+ + A K
Sbjct: 316 ITYTTLIDGSCKEGDLETAFEYRXRMIKEN----IRLDDVAYTALISGLCQEGRSVDAEK 371

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+P+  TYT ++    +   +     L+ +M + G VP  V   V++ G
Sbjct: 372 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 4/207 (1%)

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           E G   ++  F+ L+   CK G I  A  ++  +    L P VV F  L++G  K G++ 
Sbjct: 133 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 192

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
           E  RL K M  + + P V+T S LI+GL K  ++ +    F E  D        PN V +
Sbjct: 193 EXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXG----LVPNGVTF 248

Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
             +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +M  
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSM 308

Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAF 563
            G+ PD +    ++ G  + GDL++AF
Sbjct: 309 KGLKPDKITYTTLIDGSCKEGDLETAF 335


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 244/498 (48%), Gaps = 11/498 (2%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           + P +    ++L GL K GK         EM   G+  + V+Y +L+D     G V +AL
Sbjct: 6   IFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEAL 65

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
                MI +G    V+  T+LI GL    ++ EAE +F ++ +  +VPN  TY+AL+D  
Sbjct: 66  MTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSR 125

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK+ D+N A    HEM   +  PNV+T+  L++G  K G L  A      M      PNI
Sbjct: 126 CKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNI 185

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             Y  L+DG  KAG    A+ L S+M++  +  +VF  +  +  +   G++E AE L+ K
Sbjct: 186 CTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAK 245

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G+  ++V Y +L+DG+ K G +  AL++  +MT K V  ++VTF+ LI+   K G 
Sbjct: 246 MASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK 305

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
            D    +Y+ M    L PD+  +  +++G  K GN    L L+ EM   K+ P+  T + 
Sbjct: 306 SDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNI 364

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQ---ILKASKLF 496
           +I+GL + GR+ NA++   E      G Y  P    Y  ++       +   IL+  +L 
Sbjct: 365 MINGLCEAGRMENAIDILKEMV--LMGLY--PTSTTYRILLNISSKSRRADTILQTHELL 420

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
            +M+   L+ D   Y  ++  L +         +L DM + GI+ D      ++ GY  +
Sbjct: 421 VNMQ---LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCIS 477

Query: 557 GDLKSAFRCSEFLKESRI 574
             LK AF     +   R+
Sbjct: 478 SHLKRAFMTYSTMLSERV 495



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 255/551 (46%), Gaps = 43/551 (7%)

Query: 50  FNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPA---IQACNALLNGLIKKGKFDSVWEF 106
            N   ++ L+ A  + G + EAL     + V      + AC  L++GL K G+       
Sbjct: 43  LNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYL 102

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
           +  +    LV + +TY  LID  C  GD+  A +   EM +K   P V+ Y+ LI+G   
Sbjct: 103 FCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVK 162

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           +  + +A  + R M     +PN+ TY  L+DG  K    + AL+ Y +M    L+ NV  
Sbjct: 163 QGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFI 222

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
               ++ + + G +  A      MA  G+ P++  Y  L+DG  K+G +  A++L  EM 
Sbjct: 223 LDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMT 282

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              +  D+ T+N+LI  L  +G+ +  E +   M + G+  ++ TYN++++G  K+G+  
Sbjct: 283 SKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 341

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVP--------- 397
            AL + ++M  + + PN +T + +I+G C+AG ++ A+ +  EMV+  L P         
Sbjct: 342 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 401

Query: 398 --------------------------DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
                                     D  V+  LI  L K G  ++   + K+M E  I 
Sbjct: 402 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 461

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
               T ++LIHG   +  +  A  F    T  ++    SP+   Y  ++  L   G I +
Sbjct: 462 ADTTTYNALIHGYCISSHLKRA--FMTYSTMLSE--RVSPDIETYNLLLGGLSKAGLIHE 517

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A  L S+++   L P+ CTY T++ G  + +   + + +  +M+  G +P      +++ 
Sbjct: 518 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG 577

Query: 552 GYQENGDLKSA 562
            + + G +K A
Sbjct: 578 YFSKMGKMKQA 588



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 216/460 (46%), Gaps = 15/460 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           +A +N + + G+ +   E   +M   GL  D+V Y  L+D     G V  ALNL  EM  
Sbjct: 224 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 283

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
           K +   +V + +LI+ L    K  + ES++ +MRE G+ P+L TYN +++G  K  +   
Sbjct: 284 KNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS 342

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           ALE ++EM    L PN +T  ++++GLC+ G +  A +    M   G++P    Y  L++
Sbjct: 343 ALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 402

Query: 268 GHCK---AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
              K   A  + +   L   M+  ++  DV  YNILI  LC +G    A  +L+ M + G
Sbjct: 403 ISSKSRRADTILQTHELLVNMQ-LKVDKDV--YNILISNLCKLGMTRKATAVLKDMEERG 459

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
           I+A+  TYN+LI GYC    +++A    S M  + V P++ T++ L+ G  KAG I  A 
Sbjct: 460 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 519

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L +E+  + LVP+   +  L+ G  K  N KE LR+Y EM+     P     + LI   
Sbjct: 520 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 579

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD--GQILK------ASKLF 496
            K G++  A     E   K     C+   +L       L     G  LK      A +LF
Sbjct: 580 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLF 639

Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
            +M      P   T   +        +  D  MLL    K
Sbjct: 640 IEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYK 679



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 247/515 (47%), Gaps = 43/515 (8%)

Query: 51  NPSVFSTLIIAFSEMGHI---EEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S LI +  ++G I   E AL    + + +P +   ++L+NG +K+G     ++  
Sbjct: 114 NYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVL 173

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
            +MV    + ++ TY +L+D     G    AL+L+ +M   G++  V I    ++ +   
Sbjct: 174 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 233

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            +M EAE +   M   G+ P+L  Y  LMDG+ K   V+ AL    EM   N+  ++VTF
Sbjct: 234 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 293

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL++ L K+G+     + +  M + G+ P++  YN +++G+ K GN   A+ L +EM+ 
Sbjct: 294 NVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG---------ILANVVT------- 331
            ++ P+  T NI+I GLC  G++E A  +L++M   G         IL N+ +       
Sbjct: 353 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 412

Query: 332 -------------------YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
                              YN LI   CK G   KA +V   M E+G+  +  T+++LI 
Sbjct: 413 ILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIH 472

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C + ++  A   Y+ M+ + + PD+  +  L+ GLSK G + E   L  E+ +  + P
Sbjct: 473 GYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVP 532

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           +  T  +L+ G  K       L  + E   K   G+  P    Y  +I      G++ +A
Sbjct: 533 NACTYETLMCGHCKVRNTKECLRIYCEMVIK---GFI-PKPRAYNMLIGYFSKMGKMKQA 588

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            +L ++M++  + P   TY  ++ G     +M D+
Sbjct: 589 KELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDL 623



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 208/406 (51%), Gaps = 5/406 (1%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+  GI P VV +  +++GLC   K+ E + + R M + G+  N  +Y  L+D   K   
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V  AL     M+      +V+   VL+DGL K G+++ A   F ++ +  + PN   Y+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LID  CK G++  A S   EME+ +  P+V TY+ LI G    G L  A  +L+KM  + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
            + N+ TY  L+DG  K G  + AL + S+M + G++ NV    + ++   ++G ++ A 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L  +M    L PD+V +T L+DG  K G +   L L +EM    +   + T + LI+ L
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
           FK G+ S+  + +    +       SP+   Y  ++      G    A +L+++M+S  L
Sbjct: 301 FKLGK-SDTESIYSAMREMG----LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL 355

Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
            P+  T   M+ GL  A RM + + +L +M+ MG+ P +   ++++
Sbjct: 356 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 401


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 249/529 (47%), Gaps = 51/529 (9%)

Query: 75  YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           +R + + P+  A +A L  L + G  ++   F  E    G +       V+ID  C  GD
Sbjct: 15  HRSLHLPPSPDAAHAQLLALHESGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGD 74

Query: 135 VMKALNLFDEMI------------------------------------DKGIEPTVVIYT 158
           +  AL +   M+                                    D GI P VV +T
Sbjct: 75  LRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFT 134

Query: 159 ILIHGLCNENKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM-L 216
           ++I G C    M  A  +F+ M +     P+ + Y  L+DGYCK   ++RALE   EM +
Sbjct: 135 VMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRV 194

Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNL 275
              +QP+VV +  ++DGLC+      A  F    M   G  P +  Y  LI G CKA  +
Sbjct: 195 ERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKM 254

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A+ + + M + +I P + +Y+++I GL   G++  A  ++++M   G   NVV Y +L
Sbjct: 255 KLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTL 314

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           IDG CK G ++ A ++   M   G  PN  T+++LID  C+    + A+GL+    I+  
Sbjct: 315 IDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDH--IRDY 372

Query: 396 VP-DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
            P DV ++TA++ GL ++  + +   L++EM  A ++      + L+HG F++ R   A 
Sbjct: 373 CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAF 432

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
               E  D  D G C  N + Y  +I   C +  ++    LF +MR   + PD  TY+ +
Sbjct: 433 RILEELGD--DPG-CVANLLTYNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYSAL 485

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDA-VINQVMVR-GYQENGDLKS 561
           +  LL +  +     L  +M+  G+ P + V+ +V+ R  +   GDL +
Sbjct: 486 IDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAA 534



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 201/426 (47%), Gaps = 45/426 (10%)

Query: 48  PKFNPSVFSTLIIAFSE---MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   F++LI A S+   +     AL + R   + P +     ++ G  K    +  W
Sbjct: 91  PPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAW 150

Query: 105 EFYEEMVLCGLV-ADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIH 162
           E ++EM+       D   YGVLID  C +  + +AL L  EM +++ I+P VVIY  ++ 
Sbjct: 151 EIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 210

Query: 163 GLCNENKMVEAESMF-RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
           GLC  N+ +EA      +M   G  P + TY +L+ G CK   +  A+  ++ ML   +Q
Sbjct: 211 GLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQ 270

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P +V++ V++DGL K G +  A      M   G   N+ +Y  LIDG CK+G L +A +L
Sbjct: 271 PTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYAL 330

Query: 282 CSEMEKFEISP----------------------------------DVFTYNILIKGLCGV 307
              M++    P                                  DV  Y  ++ GLC  
Sbjct: 331 YRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRE 390

Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVT 366
            +L+ A  L ++M   G+ A+   YN L+ G  +    E+A  +  ++  + G   N++T
Sbjct: 391 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLT 450

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           ++++I G C    +++ M L+ EM  + + PD   ++ALID L   G +     L +EML
Sbjct: 451 YNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEML 506

Query: 427 EAKITP 432
            + ++P
Sbjct: 507 ASGLSP 512



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 9/197 (4%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQAC--NALLNGLIKKGKFDSVWEFYE 108
           N   ++TLI  F      E AL ++  I     +      A+++GL ++ + D     + 
Sbjct: 342 NQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFR 401

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGIEPTVVIYTILIHGLCNE 167
           EM L G+ AD   Y VL+          +A  + +E+  D G    ++ Y  +I G C E
Sbjct: 402 EMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLE 461

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
           + MV    +F  MR+ G+ P+  TY+AL+D      ++ RA +   EML   L P     
Sbjct: 462 SGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVL 517

Query: 228 GVLMDGLC--KVGELRA 242
           G ++  LC  + G+L A
Sbjct: 518 GRVVARLCWSRRGDLAA 534


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 223/447 (49%), Gaps = 44/447 (9%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A+  +    + +  VFS LI
Sbjct: 25  MIHFLCTHQMLSEAKSLIQVVV-----SRKGKGSASAVFAAIXETXGTQRSDJYVFSGLI 79

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +       C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 139

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C +  +  A+S+
Sbjct: 140 A-----------------------------------SLYFFNILMHRFCKDGDIRJAQSV 164

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ +YN LM+GY ++ D++        ML   +QP+V T+ VL++GLCK
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+ T
Sbjct: 225 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 284

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  + +TY +LIDG CKEGD++ A     +M 
Sbjct: 285 YNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 344

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD   +T +I+   K G++ 
Sbjct: 345 QENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHG 443
           +  +L KEM      PSV T + L++G
Sbjct: 405 KGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           + +++ LI        + +A   +R  RE        T   +++   K+        FY 
Sbjct: 72  JYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L++G+ + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++ N VT+ 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L  EM +K
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L PD + +T LIDG  K+G++       K M++  I       ++LI GL + GR  +A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
                E           P+   Y  II   C  G + K  KL  +M+ D   P   TY  
Sbjct: 372 EKMLREMLSVG----LKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNV 427

Query: 514 MLRG 517
           ++ G
Sbjct: 428 LMNG 431



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 203/418 (48%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESM----------------FRSMRECGVV--PNLYTYNA 194
           T+  Y  +IH LC    + EA+S+                F ++ E       +JY ++ 
Sbjct: 18  TLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 77

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H       T   +++ L K+   +    F+  + + G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G + +A     E   +        + V Y A+I  LC +G+ + A K
Sbjct: 318 ITYTTLIDGCCKEGDLDSA----FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNG 247

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD +    ++ G  + GDL SAF
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 254/537 (47%), Gaps = 13/537 (2%)

Query: 23  ENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL- 81
            N L  + P  +   +   L +L   +    +   L+ ++  +G    +  V+ +I  L 
Sbjct: 116 RNTLHRKGPALLSVDLLRELRNLGF-RVTEDLLCALLASWGRLGLANYSAHVFCQISFLG 174

Query: 82  --PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
             P  +  NAL++ L+K    D  +  +++M     VAD  TY  LI   C  G V +AL
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L  +M DKG  P V  YT+LI G C  +++ EA  +F +M++ GV PN  T  AL+ G 
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG-LCKVGELRAAGNFFVHMAKF----G 254
            +  D ++ALE   E L    +   V F +  D  L  +     A    V + +     G
Sbjct: 295 FRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGG 354

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
            FP   V+N ++    K   L E   +   + K  +   +  Y  LI+ L      E  +
Sbjct: 355 YFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGD 414

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            +  ++  +G+++NV +YN +I+ +C+   M+ A      M  +GV PN+VTF++LI+G 
Sbjct: 415 RVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGH 474

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G ID A  L   ++   L PD+  F++++DGL +    +E L  + EM+E  I P+ 
Sbjct: 475 CKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNA 534

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
              + LI  L   G ++ ++   L +  K      SP+   Y A+IQ  C   ++ KA K
Sbjct: 535 VIYNILIRSLCTIGDVARSVK-LLRRMQKEG---ISPDTYSYNALIQIFCRMNKVEKAKK 590

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           LF  M    L PDN TY+  +  L  + R+ +   +   M   G  PD+ I  ++++
Sbjct: 591 LFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIK 647



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 245/571 (42%), Gaps = 78/571 (13%)

Query: 48  PKFNPSVF------STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKG--- 98
           P +  S+F      S  I   S + H+   L  +  +          AL N L +KG   
Sbjct: 75  PSYAVSIFQNQQNPSHAIKFHSWLSHVNPTLAAHNSVH--------RALRNTLHRKGPAL 126

Query: 99  -KFDSVWEFYE------EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
              D + E         E +LC L+A   ++G L       G    + ++F ++   G+ 
Sbjct: 127 LSVDLLRELRNLGFRVTEDLLCALLA---SWGRL-------GLANYSAHVFCQISFLGLS 176

Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
           PT  +Y  LI  L   N +  A   F+ M     V + +TYN L+ G CKV  V+ AL  
Sbjct: 177 PTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRL 236

Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
             +M      PNV T+ +L++G C    +  A   F  M   GV+PN      L+ G  +
Sbjct: 237 VRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFR 296

Query: 272 AGNLFEAMSLCSEMEKFEIS---------------------------------------- 291
             +  +A+ L SE    E                                          
Sbjct: 297 CVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYF 356

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P    +N+++  L    +L     + + + K+G+ A +  Y +LI+   K    E+   V
Sbjct: 357 PGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRV 416

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             Q+   G+  NV +++ +I+  C+A  +D A   + +M ++ +VP++V F  LI+G  K
Sbjct: 417 YGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCK 476

Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
           DG + +  +L + +LE  + P +FT SS++ GL +  R   AL  F   T+  + G  +P
Sbjct: 477 DGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECF---TEMIEWG-INP 532

Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
           N V+Y  +I++LC  G + ++ KL   M+ + + PD  +Y  +++   R  ++     L 
Sbjct: 533 NAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLF 592

Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             M + G+ PD       +    E+G L+ A
Sbjct: 593 DSMSRSGLNPDNYTYSAFIEALSESGRLEEA 623



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 160/297 (53%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           + V++ C     ++ +  ++F+ +  +G++  +  Y  LI  L       E + ++  + 
Sbjct: 362 FNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLI 421

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
             G++ N+++YN +++ +C+   ++ A E + +M    + PN+VTF  L++G CK G + 
Sbjct: 422 SDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAID 481

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A      + + G+ P+IF ++ ++DG C+     EA+   +EM ++ I+P+   YNILI
Sbjct: 482 KARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILI 541

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           + LC +G +  +  LL++M KEGI  +  +YN+LI  +C+   +EKA  +   M+  G+ 
Sbjct: 542 RSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
           P+  T+S+ I+   ++G ++ A  ++  M      PD  +   +I  L +   ++E 
Sbjct: 602 PDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEA 658



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 197/445 (44%), Gaps = 43/445 (9%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            ++TLI    ++G ++EAL + R+++     P +     L+ G     + D  +  +E M
Sbjct: 216 TYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETM 275

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK---------------------- 148
              G+  +  T   L+       D  KAL L  E +D+                      
Sbjct: 276 KDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLAN 335

Query: 149 ------------------GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
                             G  P   ++ +++  L    ++ E   +F  +R+ GV   + 
Sbjct: 336 NSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIG 395

Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
            Y AL++   K          Y +++   L  NV ++ ++++  C+   +  A   F  M
Sbjct: 396 AYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDM 455

Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
              GV PN+  +N LI+GHCK G + +A  L   + +  + PD+FT++ ++ GLC + + 
Sbjct: 456 QVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRT 515

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           E A     +M + GI  N V YN LI   C  GD+ +++ +  +M ++G+ P+  ++++L
Sbjct: 516 EEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNAL 575

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           I   C+   ++ A  L+  M    L PD   ++A I+ LS+ G ++E  +++  M     
Sbjct: 576 IQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGC 635

Query: 431 TPSVFTVSSLIHGLFKNGRISNALN 455
           +P  +  + +I  L +   +  A N
Sbjct: 636 SPDSYICNLIIKILVQQEYVEEAQN 660



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           SVF+ ++    +   + E   V+   RK  V   I A  AL+  L K    +     Y +
Sbjct: 360 SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQ 419

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           ++  GL+++V +Y ++I+C C    +  A   F +M  +G+ P +V +  LI+G C +  
Sbjct: 420 LISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGA 479

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + +A  +  S+ E G+ P+++T+++++DG C++     ALE + EM+   + PN V + +
Sbjct: 480 IDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNI 539

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L+  LC +G++  +      M K G+ P+ + YN LI   C+   + +A  L   M +  
Sbjct: 540 LIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSG 599

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
           ++PD +TY+  I+ L   G+LE A+ +   M   G   +    N +I    ++  +E+A 
Sbjct: 600 LNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQ 659

Query: 350 SVCSQMTEKGVEPNVV 365
           ++  +  +KG+  N +
Sbjct: 660 NIIERCRQKGISLNSI 675



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 22/361 (6%)

Query: 227 FGVLMDGLC-------KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
           F V  D LC       ++G    + + F  ++  G+ P   +YN LID   K+ ++  A 
Sbjct: 140 FRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAY 199

Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
               +M       D FTYN LI G+C VG ++ A  L+++M  +G   NV TY  LI+G+
Sbjct: 200 LKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGF 259

Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
           C    +++A  V   M + GV PN  T  +L+ G  +  +   A+ L +E + +    + 
Sbjct: 260 CIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQER 319

Query: 400 VVFTALIDG----LSKDGNMKETLRLYKEML-EAKITP--SVFTVSSLIHGLFKNGRISN 452
           V F    D     L+ +   KE +   + +L      P  SVF V  ++  L K   +  
Sbjct: 320 VHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNV--VMACLVKGAELRE 377

Query: 453 ALNFF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
             + F + +      G  +     Y A+I+ L  +    +  +++  + SD L  +  +Y
Sbjct: 378 TCDVFEILRKQGVKAGIGA-----YLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSY 432

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             ++    RAK M +      DM   G+VP+ V    ++ G+ ++G +  A +  E L E
Sbjct: 433 NMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLE 492

Query: 572 S 572
           +
Sbjct: 493 N 493



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%)

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
           SP   LY A+I AL     I  A   F  M +DN   D  TY T++ G+ +   + + + 
Sbjct: 176 SPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALR 235

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
           L+  M   G  P+     +++ G+     +  AF   E +K+S +  +E 
Sbjct: 236 LVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEA 285


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 250/517 (48%), Gaps = 11/517 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVY-----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
           N   +  ++ +    G I +AL V      R     P +  C+ +L    + G F S   
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPM--CHVILEAACRGGGFRSAVR 164

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
             + +   G   D     +++   C QG V + + L  ++   G EP +V Y  ++ GLC
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
              +  + E +   M   G  PN+ T+N L+   C+     +  E   +M  H   P++ 
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
            +  ++DG+CK G    A +    M  +G+ PN+  YN ++ G C A    EA  L +EM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            + +   D  T+NIL+   C  G ++    LL++M + G + +V+TY ++I+G+CKEG +
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++A+ +   M+  G +PN ++++ ++ G C+A     A  L + M+ +  +P+ V F  L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I+ + K G +++ + L K+ML    +P + + S++I GL K G+   AL       +K  
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG- 523

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
               +PN ++Y+++  AL  +G+  K  ++F  ++   +R D   Y  ++  L +     
Sbjct: 524 ---ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETD 580

Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +   A M+  G +P+     +++RG    G ++ A
Sbjct: 581 RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREA 617



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 7/447 (1%)

Query: 58  LIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
           ++ A  E G ++E + + RK+      P I + NA+L GL    ++D V E   EMV  G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
              +V T+  LI   C  G   +      +M + G  P + +Y  +I G+C +     A 
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   M   G+ PN+  YN ++ G C       A +   EM   +   + VTF +L+D  
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C+ G +         M + G  P++  Y  +I+G CK G + EA+ L   M      P+ 
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 423

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            +Y I++KGLC   +   A+ L+  M ++G L N VT+N+LI+  CK+G +E+A+ +  Q
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   G  P+++++S++IDG  KAG  + A+ L   M+ K + P+ ++++++   LS++G 
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
             + ++++  + +A +       +++I  L K      A++FF           C PN  
Sbjct: 544 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG----CMPNES 599

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRS 501
            Y  +I+ L  +G + +A  L S++ S
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSELCS 626



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 230/522 (44%), Gaps = 7/522 (1%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
            S LI +    G   +A            + A NA++ G  + G+   V           
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAAVP 103

Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
           +  +  TY  ++   C +G +  AL + DEM  +G   T  +  +++   C       A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
              + +   G   +    N ++   C+   V+  +E   ++     +P++V++  ++ GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C            V M + G  PN+  +N LI   C+ G   +     S+M +   +PD+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             Y  +I G+C  G  E A  +L +M   G+  NVV YN+++ G C     E+A  + ++
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M ++    + VTF+ L+D  C+ G +D  + L  +M+    +PDV+ +T +I+G  K+G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           + E + L K M      P+  + + ++ GL +  R  +A         +     C PN V
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG----CLPNPV 459

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            +  +I  +C  G + +A +L   M  +   PD  +Y+T++ GL +A +  + + LL  M
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGS 576
           I  GI P+ +I   M       G      +  + ++++ + S
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRS 561



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 163/346 (47%), Gaps = 3/346 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           +++T+I    + GH E A  +  ++    + P +   N +L GL    +++   +   EM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
                  D VT+ +L+D  C  G V + + L ++M++ G  P V+ YT +I+G C E  +
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  + ++M  CG  PN  +Y  ++ G C+      A E    M+     PN VTF  L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++ +CK G +  A      M   G  P++  Y+ +IDG  KAG   EA+ L + M    I
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           +P+   Y+ +   L   G+ +    +   +    + ++   YN++I   CK  + ++A+ 
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 584

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
             + M   G  PN  T++ LI G    G +  A  L +E+  +  V
Sbjct: 585 FFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 32/200 (16%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           NP  F+TLI                                N + KKG  +   E  ++M
Sbjct: 457 NPVTFNTLI--------------------------------NFMCKKGLVEQAIELLKQM 484

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           ++ G   D+++Y  +ID     G   +AL L + MI+KGI P  +IY+ +   L  E + 
Sbjct: 485 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 544

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +   MF S+++  V  +   YNA++   CK  + +RA++F+  M+ +   PN  T+ +L
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 604

Query: 231 MDGLCKVGELRAAGNFFVHM 250
           + GL   G +R A +    +
Sbjct: 605 IRGLASEGLVREAQDLLSEL 624


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 270/543 (49%), Gaps = 9/543 (1%)

Query: 39  FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLI 95
           FN L S+     +  V   L+      G +++AL ++    ++ V+    +   +LN LI
Sbjct: 133 FNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192

Query: 96  KKGKFDSVWEFYEEMVLCGL-VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
              + D + + ++++   G+  + V  +G ++D    +G+V KAL+    ++++G    +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V    ++ GL + +++  A  +   + +CG  PN+ T+  L++G+CK  +++RA + +  
Sbjct: 253 VSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    ++P+++ +  L+DG  K G L      F      GV  ++ V++  ID + K+G+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           L  A  +   M    ISP+V TY ILIKGLC  G++  A G+  ++ K G+  ++VTY+S
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LIDG+CK G++    ++   M + G  P+VV +  L+DG  K G +  AM    +M+ +S
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
           +  +VVVF +LIDG  +     E L++++ M    I P V T ++++      GR+  AL
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
             F             P+ + Y  +I A C   +     +LF  M+ + +  D      +
Sbjct: 552 FLFFRMFKMG----LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           +  L +  R+ D      ++I+  + PD V    M+ GY     L  A R  E LK +  
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667

Query: 575 GSS 577
           G +
Sbjct: 668 GPN 670



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 222/440 (50%), Gaps = 9/440 (2%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
            I +CN +L GL    + +        ++ CG   +VVT+  LI+  C +G++ +A +LF
Sbjct: 251 GIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309

Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
             M  +GIEP ++ Y+ LI G      +     +F      GV  ++  +++ +D Y K 
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369

Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
            D+  A   Y  ML   + PNVVT+ +L+ GLC+ G +  A   +  + K G+ P+I  Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           + LIDG CK GNL    +L  +M K    PDV  Y +L+ GL   G +  A     KM  
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           + I  NVV +NSLIDG+C+    ++AL V   M   G++P+V TF++++      G ++ 
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET--LRLYKEMLEAKITPSVFTVSSL 440
           A+ L+  M    L PD + +  LID   K  +MK T  L+L+  M   KI+  +   + +
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           IH LFK  RI +A  FF    +    G   P+ V Y  +I   C   ++ +A ++F  ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIE----GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663

Query: 501 SDNLRPDNCTYTTMLRGLLR 520
                P+  T T ++  L +
Sbjct: 664 VTPFGPNTVTLTILIHVLCK 683



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 244/492 (49%), Gaps = 26/492 (5%)

Query: 70  EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC--------------GL 115
            AL  +R  E+     +   + + LI+ G FD   + ++EM+                 L
Sbjct: 85  SALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSL 144

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE-PTVVIYTILIHGLCNENKMVEAE 174
            ADV  +  L++CCC  G V KAL +F      G+  P   +Y +L + L   +++    
Sbjct: 145 DADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIA 201

Query: 175 SMFRSMRECGVVPN-LYTYNALMDG-YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
             F  +   G+ P+ +  +  ++D  +CK  +V +AL+F+  ++    +  +V+   ++ 
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLK 260

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           GL  V ++  A      +   G  PN+  +  LI+G CK G +  A  L   ME+  I P
Sbjct: 261 GL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D+  Y+ LI G    G L     L  +   +G+  +VV ++S ID Y K GD+  A  V 
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
            +M  +G+ PNVVT++ LI G C+ G I  A G+Y +++ + + P +V +++LIDG  K 
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           GN++    LY++M++    P V     L+ GL K G + +A+ F    + K  G     N
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF----SVKMLGQSIRLN 495

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V++ ++I   C   +  +A K+F  M    ++PD  T+TT++R  +   R+ + + L  
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555

Query: 533 DMIKMGIVPDAV 544
            M KMG+ PDA+
Sbjct: 556 RMFKMGLEPDAL 567



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 3/402 (0%)

Query: 48  PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
           P  N   F TLI  F + G ++ A  +++ +E   + P + A + L++G  K G      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
           + + + +  G+  DVV +   ID     GD+  A  ++  M+ +GI P VV YTILI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
           C + ++ EA  M+  + + G+ P++ TY++L+DG+CK  ++      Y +M+     P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V +GVL+DGL K G +  A  F V M    +  N+ V+N LIDG C+     EA+ +   
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M  + I PDV T+  +++     G+LE A  L  +M+K G+  + + Y +LID +CK   
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
               L +   M    +  ++   + +I    K   I+ A   +  ++   + PD+V +  
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641

Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           +I G      + E  R+++ +      P+  T++ LIH L K
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +     L+NG  K+G+ D  ++ ++ M   G+  D++ Y  LID     G +     L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F + + KG++  VV+++  I        +  A  +++ M   G+ PN+ TY  L+ G C+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              +  A   Y ++L   ++P++VT+  L+DG CK G LR+    +  M K G  P++ +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y  L+DG  K G +  AM    +M    I  +V  +N LI G C + + + A  + + M 
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             GI  +V T+ +++     EG +E+AL +  +M + G+EP+ + + +LID  CK     
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
             + L+  M    +  D+ V   +I  L K   +++  + +  ++E K+ P + T +++I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
            G     R+  A   F E    T  G   PN V    +I  LC
Sbjct: 644 CGYCSLRRLDEAERIF-ELLKVTPFG---PNTVTLTILIHVLC 682



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 193/449 (42%), Gaps = 93/449 (20%)

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTY------NALMDGYCKVAD---VNRALEF--YHEM 215
           E++   A   FR     G  P+ YT       N + D   KV D    NR  +F     +
Sbjct: 80  ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSI 139

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCL--------- 265
              +L  +V  F  LM+  C+ G +  A   FV+  + GV  P   VY  L         
Sbjct: 140 RDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197

Query: 266 ------IDGHCKAG----------NLFEAMSLCSEMEK------------FEISPDVFTY 297
                  D  C+ G           + +A+    E+ K            F +   + + 
Sbjct: 198 DLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG--IVSC 255

Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
           N ++KGL  V Q+E A  LL  +   G   NVVT+ +LI+G+CK G+M++A  +   M +
Sbjct: 256 NKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314

Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
           +G+EP+++ +S+LIDG  KAG +     L+++ + K +  DVVVF++ ID   K G++  
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374

Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
              +YK ML   I                                       SPN V Y 
Sbjct: 375 ASVVYKRMLCQGI---------------------------------------SPNVVTYT 395

Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
            +I+ LC DG+I +A  ++  +    + P   TY++++ G  +   +     L  DMIKM
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           G  PD VI  V+V G  + G +  A R S
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 38/295 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ LI    + G I EA  +Y +I    + P+I   ++L++G  K G   S +  Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+M+  G   DVV YGVL+D    QG ++ A+    +M+ + I   VV++  LI G C  
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALM------------------------------- 196
           N+  EA  +FR M   G+ P++ T+  +M                               
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 197 ----DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
               D +CK       L+ +  M  + +  ++    V++  L K   +  A  FF ++ +
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
             + P+I  YN +I G+C    L EA  +   ++     P+  T  ILI  LC +
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKI 684


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 212/412 (51%), Gaps = 9/412 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 22  MIHFLCTHQMLSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 76

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + ++      C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 77  TAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 136

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A +  + +L+   C  GD+  A ++FD +   G+ P+VV Y  L++G      + E   +
Sbjct: 137 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRL 196

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   GV+P++YTY+ L++G CK + ++ A E + EML   L PN VTF  L+DG CK
Sbjct: 197 KSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 256

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M    + P++  YN LI G CK G+L +A  L  EM    + PD FT
Sbjct: 257 NGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 316

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G L+ A    ++M +E I  + V Y +LI G C+EG    A  +  +M 
Sbjct: 317 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREML 376

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             G++P+  T++ +I+  CK G++     L  EM      P VV +  L++G
Sbjct: 377 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 205/418 (49%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 15  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 74

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H L     T   +++ L K+   +    F+  + + G
Sbjct: 75  LITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 134

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 135 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGF 194

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+L +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 195 RLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 254

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y  M+ +SL+PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 255 CKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 314

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
           FT ++LI G  K G +  A     E   +        + V YAA+I  LC +G+ + A K
Sbjct: 315 FTYTTLIDGCCKEGDLDTA----FEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEK 370

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G  P  V   V++ G
Sbjct: 371 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 129 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 188

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 189 HLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LIPNG 244

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 245 VTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 304

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD      ++ G  + GDL +AF
Sbjct: 305 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 334


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 211/419 (50%), Gaps = 25/419 (5%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKF------D 101
           NPS+F++L+ ++        A  +  ++      P     N  +  +  + K       D
Sbjct: 345 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 404

Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
              + Y EM+    V + V       C CG G   KA  L  EM+ KG  P    Y+ +I
Sbjct: 405 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 464

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
             LC+  K+ +A  +F+ M+  GV P++YTY  L+D +CK   + +A   + EM      
Sbjct: 465 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 524

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           P VVT+  L+    K  ++  A + F  M   G  PN   Y  L+DG CKAGN+ +A  +
Sbjct: 525 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 584

Query: 282 CSEM----------------EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
            +++                ++  ++P+V TY  L+ GLC   +++ A  LL  M   G 
Sbjct: 585 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 644

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             N + Y++LIDG+CK G ++ A  V  QMT+ G  P+V T++SLID   K G +D AM 
Sbjct: 645 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 704

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
           + ++M+  S  P+VV +TA+IDGL + G  ++ L+L   M E   +P+V T ++LI GL
Sbjct: 705 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 222/492 (45%), Gaps = 26/492 (5%)

Query: 87  CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
           C  +++GL++   FD    F   M     + +VVTY  L+     +  +     + + M+
Sbjct: 279 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 338

Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADV- 205
            +G  P   ++  L+H  CNE     A  +   M  CG  P    YN  +   C    + 
Sbjct: 339 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP 398

Query: 206 -----NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
                + A + Y EML  N   N V        LC VG+   A      M + G  P+  
Sbjct: 399 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 458

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ +I   C A  + +A  L  EM+   ++PDV+TY ILI   C  G +E A+ L ++M
Sbjct: 459 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 518

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G    VVTY +LI  Y K   + +A  +  +M + G  PN VT+ +L+DG CKAGNI
Sbjct: 519 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 578

Query: 381 DAAMGLYTEMVIKS----------------LVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
             A  +Y +++  S                L P+VV + AL+DGL K   +     L   
Sbjct: 579 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 638

Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           ML +   P+     +LI G  K G+I +A   FL+ T     GY    H  Y ++I  + 
Sbjct: 639 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK---CGYLPSVHT-YTSLIDRMF 694

Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
            DG++  A K+ S M  D+  P+  TYT M+ GL R       + LL+ M + G  P+ V
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 754

Query: 545 INQVMVRGYQEN 556
               ++ G  ++
Sbjct: 755 TYTALIDGLGQS 766



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 226/506 (44%), Gaps = 31/506 (6%)

Query: 40  NALNSLEIPKFN-PSVFST-LIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGL 94
           +AL+ +E   F   +V  T +I    E  + +EA+    ++     +P +     LL+G 
Sbjct: 262 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 321

Query: 95  IKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
           +KK +          M+  G   +   +  L+   C + D   A  L + M   G  P  
Sbjct: 322 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381

Query: 155 VIYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           V+Y I I  +C + K+        AE ++  M     V N           C V   ++A
Sbjct: 382 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
            +   EM+     P+  T+  ++  LC   ++  A   F  M   GV P+++ Y  LID 
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 501

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
            CKAG + +A  L  EM     SP V TY  LI       Q+  A  +  +M   G   N
Sbjct: 502 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 561

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMT----------------EKGVEPNVVTFSSLID 372
            VTY +L+DG CK G++ KA  V +++                    + PNVVT+ +L+D
Sbjct: 562 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 621

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CKA  +D A  L   M+     P+ +V+ ALIDG  K G +     ++ +M +    P
Sbjct: 622 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 681

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           SV T +SLI  +FK+GR+  A+    +    +    C+PN V Y A+I  LC  G+  KA
Sbjct: 682 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS----CTPNVVTYTAMIDGLCRIGESEKA 737

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGL 518
            KL S M      P+  TYT ++ GL
Sbjct: 738 LKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 232/568 (40%), Gaps = 71/568 (12%)

Query: 61  AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
           A  E+G +++  + YR     P+    NAL+  L   G+ D  +   +EM   G   D  
Sbjct: 193 ALEELGRLKD--FGYR-----PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 245

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           T G      C +G    AL++ +    +  +   V+ T +I GL   +   EA S    M
Sbjct: 246 TVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 302

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
           R    +PN+ TY  L+ G+ K   +       + M+     PN   F  L+   C   + 
Sbjct: 303 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 362

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDG-------------------------------- 268
             A      M   G  P   VYN  I                                  
Sbjct: 363 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 422

Query: 269 ---------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
                     C  G   +A  L  EM +    PD  TY+ +I  LC   ++E A  L Q+
Sbjct: 423 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 482

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G+  +V TY  LID +CK G +E+A  +  +M   G  P VVT+++LI    KA  
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML------------- 426
           +  A  ++  MV     P+ V + AL+DGL K GN+ +   +Y +++             
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602

Query: 427 ---EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQAL 483
                 + P+V T  +L+ GL K  ++ +A     E  D      C PNH++Y A+I   
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHA----HELLDAMLSSGCEPNHIVYDALIDGF 658

Query: 484 CYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDA 543
           C  G+I  A ++F  M      P   TYT+++  + +  R+   M +L+ M+K    P+ 
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 718

Query: 544 VINQVMVRGYQENGDLKSAFRCSEFLKE 571
           V    M+ G    G+ + A +    ++E
Sbjct: 719 VTYTAMIDGLCRIGESEKALKLLSLMEE 746



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 184/464 (39%), Gaps = 17/464 (3%)

Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
           Y  L D     G    A  L  E+ ++  E    +  +L+   C      EA      ++
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
           + G  P+  TYNAL+        V+       EM       +  T G     LCK G   
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
            A +  +    F +  +  +   +I G  +A    EAMS    M      P+V TY  L+
Sbjct: 262 DALDM-IEREDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
            G     QL   + ++  M  EG   N   +NSL+  YC E D   A  + ++MT  G  
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 378

Query: 362 PNVVTFSSLIDGQCKAGN------IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
           P  V ++  I   C          +D A  +Y EM+  + V + V        L   G  
Sbjct: 379 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 438

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +  +L KEM+     P   T S +I  L    ++  A   F E   K  G   +P+   
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM--KMVG--VTPDVYT 494

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y  +I + C  G I +A  LF +MRS    P   TYT ++   L+AK++     +   M+
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
             G  P+ V    +V G  + G++  AF     L    IG+S++
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDS 594


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 213/412 (51%), Gaps = 9/412 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L + +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 25  MIHFLCSHQMFSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 79

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E+G + +A+  YR   + +       C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 80  TAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 139

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A +  + +L+   C +GD+  A ++FD +   G+ P+VV Y  L++G      + E   +
Sbjct: 140 ASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   GV P++YTY+ L++G CK + ++ A + + EML   L PN VTF  L+DG CK
Sbjct: 200 KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCK 259

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M    + P++  YN LI G CK G+L +A  L  EM    + PD  T
Sbjct: 260 NGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKIT 319

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G L+ A    + M +E I  + V Y +LI G C+EG    A  +  +M 
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             G++P+  T++ +I+  CK G++     L  EM     VP VV +  L++G
Sbjct: 380 SVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE        T   +++   K+    
Sbjct: 65  KGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFK 124

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLM 184

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M ++G++
Sbjct: 185 NGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLV 244

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P++VT+++LI G CK G++  A  L
Sbjct: 245 PNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDL 304

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM +  L PD + +T LIDG  K+G++       K M++  I       ++LI GL +
Sbjct: 305 IDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQ 364

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+   Y  II   C  G + K SKL  +M+ D   P
Sbjct: 365 EGRSVDAEKMLREMLSVG----LKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 421 SVVTYNVLMNG 431



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 209/421 (49%), Gaps = 28/421 (6%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC+     EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 18  TLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 77

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y ++  +  A++ Y     H       T   +++ L K+   +    F+  + + G
Sbjct: 78  LITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 138 YPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M+  G+  +V TY+ LI+G CKE  M+ A  +  +M EKG+ PN VTF++LIDG 
Sbjct: 198 RLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGH 257

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL+PD+V + ALI GL K G++K+   L  EM    + P  
Sbjct: 258 CKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDK 317

Query: 435 FTVSSLIHGLFKNGRISNAL---NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
            T ++LI G  K G +  A       +++  + D        V Y A+I  LC +G+ + 
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDD-------VAYTALISGLCQEGRSVD 370

Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
           A K+  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ 
Sbjct: 371 AEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430

Query: 552 G 552
           G
Sbjct: 431 G 431



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 4/221 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K  ++ +A   F E  +K       PN 
Sbjct: 192 DLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKG----LVPNS 247

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G +  A +++  M S +L PD  TY  ++ GL +   +     L+ +
Sbjct: 248 VTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDE 307

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
           M   G+ PD +    ++ G  + GDL +AF   + + +  I
Sbjct: 308 MSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENI 348


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 248/531 (46%), Gaps = 45/531 (8%)

Query: 80  VLPAIQACNALL-----NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD 134
           V+P +   N+L+     NGL+     D V   Y +M+ CG+  DV    VLI   C  G 
Sbjct: 89  VVPDLCLWNSLIHQFNVNGLVH----DQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQ 144

Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
           +  A++L    +   I    V Y  +I GLC      EA      M + G++P+  ++N 
Sbjct: 145 LSFAISLLRNRV---ISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNT 201

Query: 195 LMDGYCKVADVNRAL----------------------------EFYHEMLHHNLQPNVVT 226
           L+DG+CKV +  RA                             E Y +M+     P+VVT
Sbjct: 202 LIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVT 261

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           F  +++ LCK G++   G     M + GV+PN   Y  L+D   KA +   A++L S+M 
Sbjct: 262 FSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMV 321

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I  D+  Y +L+ GL   G L  AE   + + ++  + NVVTY +L+DG CK GD+ 
Sbjct: 322 VRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLS 381

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  + +QM EK V PNVVT+SS+I+G  K G ++ A+ L  +M  +++VP+   +  +I
Sbjct: 382 SAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVI 441

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
           DGL K G  +    + KEM    +  + + + +L++ L + GRI        +   K   
Sbjct: 442 DGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG-- 499

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
              + +H+ Y ++I      G    A     +M+   +  D  +Y  ++ GLL+  + + 
Sbjct: 500 --VTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGK-VG 556

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
                  M + GI PD     +M+   ++ GD +   +  + +K   I  S
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPS 607



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 259/549 (47%), Gaps = 35/549 (6%)

Query: 51  NPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           +P VF+   LI +  ++G +  A+ + R   +       N +++GL + G  D  ++F  
Sbjct: 126 SPDVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLS 185

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE------------------------ 144
           EMV  G++ D V++  LID  C  G+  +A  L DE                        
Sbjct: 186 EMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEE 245

Query: 145 ----MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
               M+  G +P VV ++ +I+ LC + K++E   + R M E GV PN  TY  L+D   
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLF 305

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           K  D   AL  Y +M+   +  ++V + VLM GL K G+LR A   F  + +    PN+ 
Sbjct: 306 KAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVV 365

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  L+DG CKAG+L  A  + ++M +  + P+V TY+ +I G    G LE A  L++KM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKM 425

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             + ++ N  TY ++IDG  K G  E A  +  +M   GVE N     +L++   + G I
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRI 485

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
               GL  +MV K +  D + +T+LID   K G+ +  L   +EM E ++   V + + L
Sbjct: 486 KEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVL 545

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
           I GL K G++     +   K  +  G    P+   +  ++ +    G      KL+  M+
Sbjct: 546 ISGLLKFGKVGADWAY---KGMREKG--IEPDIATFNIMMNSQRKQGDFEGILKLWDKMK 600

Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
           S  ++P       ++  L    +M + + +L  M+ M I P+    ++ +    ++    
Sbjct: 601 SCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRAD 660

Query: 561 SAFRCSEFL 569
           + F+  E L
Sbjct: 661 AIFKTHETL 669



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 161/644 (25%), Positives = 288/644 (44%), Gaps = 95/644 (14%)

Query: 11  YKNARCLIKDVTE-NLLKSRKPHHVCYSVFNALNSLE-------IPKFNPSV--FSTLII 60
           +  A+ L+ +++E NL+     H +  S +  L+++E       +  F+P V  FS++I 
Sbjct: 212 FARAKALVDEISELNLI----THTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIIN 267

Query: 61  AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
              + G + E   + R++E   V P       L++ L K   +      Y +MV+ G+  
Sbjct: 268 RLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPV 327

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
           D+V Y VL+      GD+ +A   F  +++    P VV YT L+ GLC    +  AE + 
Sbjct: 328 DLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFII 387

Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
             M E  V PN+ TY+++++GY K   +  A+    +M   N+ PN  T+G ++DGL K 
Sbjct: 388 TQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKA 447

Query: 238 GELRAAGNFFVHMAKFGVFPNIFV-----------------------------------Y 262
           G+   A      M   GV  N ++                                   Y
Sbjct: 448 GKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINY 507

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
             LID   K G+   A+S   EM++ E+  DV +YN+LI GL   G++ GA+   + M +
Sbjct: 508 TSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKGMRE 566

Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
           +GI  ++ T+N +++   K+GD E  L +  +M   G++P+++  + ++   C+ G +  
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKE 626

Query: 383 AMGLYTEMVIKSLVPDVV-----------------------------------VFTALID 407
           A+ +  +M+   + P++                                    V+  LI 
Sbjct: 627 AIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K G  ++   + ++M      P   T ++L+HG F    +  AL+ +   +   + G
Sbjct: 687 TLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTY---SMMMEAG 743

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
             SPN   Y  II+ L   G I +  K  S+M+S  +RPD+ TY  ++ G  +     + 
Sbjct: 744 -ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKES 802

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           M +  +MI  G+VP      V++  + + G +    + +E +KE
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFAKVGKM---LQATELMKE 843



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 235/499 (47%), Gaps = 38/499 (7%)

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
           F+ ++ L      V  +  L       G +  A      M   G+ P + ++  LIH   
Sbjct: 45  FHPDLALNKTRVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQF- 103

Query: 166 NENKMV--EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
           N N +V  +   ++  M  CGV P+++  N L+   CKV  ++ A+      +   +  +
Sbjct: 104 NVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRV---ISVD 160

Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
            VT+  ++ GLC+ G    A  F   M K G+ P+   +N LIDG CK GN   A +L  
Sbjct: 161 TVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVD 220

Query: 284 EMEKFEI----------------------------SPDVFTYNILIKGLCGVGQLEGAEG 315
           E+ +  +                             PDV T++ +I  LC  G++     
Sbjct: 221 EISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGL 280

Query: 316 LLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQC 375
           LL++M + G+  N VTY +L+D   K  D   AL++ SQM  +G+  ++V ++ L+ G  
Sbjct: 281 LLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLF 340

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KAG++  A   +  ++  + VP+VV +TAL+DGL K G++     +  +MLE  + P+V 
Sbjct: 341 KAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVV 400

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T SS+I+G  K G +  A++   +  D+       PN   Y  +I  L   G+   AS++
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLMRKMEDQN----VVPNGFTYGTVIDGLFKAGKQEVASEM 456

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
             +MR   +  +N     ++  L R  R+ +V  L+ DM+  G+  D +    ++  + +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFK 516

Query: 556 NGDLKSAFRCSEFLKESRI 574
            GD ++A   +E ++E  +
Sbjct: 517 GGDEEAALSWAEEMQEKEM 535



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 223/475 (46%), Gaps = 49/475 (10%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   +S++I  + + G +EEA+ + RK+E   V+P       +++GL K GK +   E  
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMS 457

Query: 108 EEMVLCG--------------------------LVADVVTYGV---------LIDCCCGQ 132
           +EM L G                          LV D+V+ GV         LID     
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKG 517

Query: 133 GDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTY 192
           GD   AL+  +EM +K +   VV Y +LI GL    K V A+  ++ MRE G+ P++ T+
Sbjct: 518 GDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGK-VGADWAYKGMREKGIEPDIATF 576

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N +M+   K  D    L+ + +M    ++P+++   +++  LC+ G+++ A +    M  
Sbjct: 577 NIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMF 636

Query: 253 FGVFPNIFVYNCLID---GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
             + PN+  Y   +D    H +A  +F+       +  + I      YN LI  LC +G 
Sbjct: 637 MEIHPNLTTYRIFLDMSSKHKRADAIFKTHE---TLLSYGIKLSRQVYNTLIATLCKLGM 693

Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
              A  +++ M   G + + VT+N+L+ GY     + KALS  S M E G+ PNV T+++
Sbjct: 694 TRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNT 753

Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
           +I G   AG I       +EM  + + PD   + ALI G +K GN KE++ +Y EM+   
Sbjct: 754 IIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADG 813

Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
           + P   T + LI    K G++  A     E   +      SPN   Y  +I  LC
Sbjct: 814 LVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRR----VSPNTSTYCTMISGLC 864



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 206/421 (48%), Gaps = 17/421 (4%)

Query: 55  FSTLIIAFSEMGHIEEAL-WV--YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
           +++LI  F + G  E AL W    ++ E+   + + N L++GL+K GK  + W  Y+ M 
Sbjct: 507 YTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWA-YKGMR 565

Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
             G+  D+ T+ ++++    QGD    L L+D+M   GI+P+++I  I++  LC + KM 
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMK 625

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
           EA  +   M    + PNL TY   +D   K    +   + +  +L + ++ +   +  L+
Sbjct: 626 EAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685

Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
             LCK+G  R A      M   G  P+   +N L+ G+    ++ +A+S  S M +  IS
Sbjct: 686 ATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGIS 745

Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
           P+V TYN +I+GL   G ++  E  L +M   G+  +  TYN+LI G  K G+ ++++++
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTI 805

Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
             +M   G+ P   T++ LI    K G +  A  L  EM  + + P+   +  +I GL K
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865

Query: 412 -------DGNMK-----ETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFL 458
                  + N K     E   L KEM+E K   P   T+  +     K G   +A  F  
Sbjct: 866 LCTHPEVEWNKKAMYLAEAKGLLKEMIEEKGYIPYNQTIYWISAAFSKPGMKVDAERFLK 925

Query: 459 E 459
           E
Sbjct: 926 E 926


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 209/402 (51%), Gaps = 5/402 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +L+   C  G    A  +FD M   GI P   I  +L+       K+  A++    +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G+  + + YN L++   K   V+ A+  + E L     P+V +F +L+ GLC++GE+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNI 299
             A  FF +M  FG FP+I  YN LI+G C+   + +   L  E M    +SPDV TY  
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I G C +G ++ A  L  +M   GI  N  T+N LIDG+ K G+M  A+ +  +M   G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+VVTF+SLIDG C+ G ++  + L+ EM +++L P+V  +  LI+ L K+  ++E  
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
              + +  +++ P  F  + +I G  K G++  A NF + +  +     C P+ + +  +
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA-NFIVAEMQEKK---CRPDKITFTIL 466

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           I   C  G++++A   F  M   N  PD  T  +++  LL+A
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 209/397 (52%), Gaps = 5/397 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            I  T   Y +L+  LC       A+ +F  MR  G++P+      L+  Y ++  ++ A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
             F +E+  + ++ +   +  L++ L K   +  A   F    +    P+++ +N LI G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILA 327
            C+ G + +A      M  F   PD+ +YN LI G C V ++     LL++ M  +G+  
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V+TY S+I GYCK GDM+ A  +  +M   G++PN  TF+ LIDG  K GN+ +AM +Y
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M++   +PDVV FT+LIDG  ++G + + L+L++EM    ++P+V+T + LI+ L K 
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            RI  A NF              P   +Y  +I   C  G++ +A+ + ++M+    RPD
Sbjct: 404 NRIREARNFL----RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             T+T ++ G     RM++ +     MI++  VPD +
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEI 496



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 204/383 (53%), Gaps = 8/383 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK-----IEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + S+   L+ +++ MG ++ A     +     I+V P +   N LLN L+K+   D    
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVY--NNLLNMLVKQNLVDEAVL 200

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + E +    V DV ++ +LI   C  G++ KA   F  M + G  P +V Y  LI+G C
Sbjct: 201 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 260

Query: 166 NENKMVEAESMFRS-MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             N++ +   + +  M   GV P++ TY +++ GYCK+ D+  A E + EM+   ++PN 
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF VL+DG  KVG +R+A   +  M   G  P++  +  LIDG+C+ G + + + L  E
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+   +SP+V+TY +LI  LC   ++  A   L+ +    ++     YN +IDG+CK G 
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A  + ++M EK   P+ +TF+ LI G C  G +  A+  + +M+  + VPD +   +
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 405 LIDGLSKDGNMKETLRLYKEMLE 427
           LI  L K G   E  ++ +  L+
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQ 523



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 209/407 (51%), Gaps = 5/407 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+  L K G  DS    ++ M   G++ D     +L+      G +  A N  +E+   G
Sbjct: 115 LMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYG 174

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I+ +  +Y  L++ L  +N + EA  +FR   E   VP++Y++N L+ G C++ ++++A 
Sbjct: 175 IKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAF 234

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKFGVFPNIFVYNCLIDG 268
           EF+  M +    P++V++  L++G C+V E+    +     M   GV P++  Y  +I G
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CK G++  A  L  EM    I P+ FT+N+LI G   VG +  A  + +KM   G L +
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVT+ SLIDGYC+EG++ + L +  +M  + + PNV T++ LI+  CK   I  A     
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            +    +VP   ++  +IDG  K G + E   +  EM E K  P   T + LI G    G
Sbjct: 415 HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKG 474

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           R+  A++ F +  +      C P+ +   ++I  L   G   +AS++
Sbjct: 475 RMVEAISTFYKMIEIN----CVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 190/374 (50%), Gaps = 1/374 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R   +LP       L++   + GK DS   F  E+   G+      Y  L++    Q  V
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLV 195

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A+ LF E ++    P V  + ILI GLC   ++ +A   F++M   G  P++ +YN L
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255

Query: 196 MDGYCKVADVNRALEFYHE-MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++G+C+V ++++  +   E ML   + P+V+T+  ++ G CK+G+++AA   F  M   G
Sbjct: 256 INGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN F +N LIDG  K GN+  AM +  +M      PDV T+  LI G C  G++    
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L ++M    +  NV TY  LI+  CKE  + +A +    +    V P    ++ +IDG 
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CKAG +D A  +  EM  K   PD + FT LI G    G M E +  + +M+E    P  
Sbjct: 436 CKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495

Query: 435 FTVSSLIHGLFKNG 448
            T++SLI  L K G
Sbjct: 496 ITINSLISCLLKAG 509



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 174/329 (52%), Gaps = 10/329 (3%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           P F P V+S   LI     +G I++A   ++ +      P I + N L+NG  +  +   
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267

Query: 103 VWEFY-EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             +   E+M++ G+  DV+TY  +I   C  GD+  A  LFDEM+  GI+P    + +LI
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G      M  A  M+  M   G +P++ T+ +L+DGYC+  +VN+ L+ + EM   NL 
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNV T+ VL++ LCK   +R A NF  H+    V P  F+YN +IDG CKAG + EA  +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            +EM++ +  PD  T+ ILI G C  G++  A     KM +   + + +T NSLI    K
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            G   +A    SQ+ +  ++   +  SSL
Sbjct: 508 AGMPNEA----SQIKQAALQKLNLGLSSL 532



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 16/312 (5%)

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY++L++ LC VG  + A+ +   M  +GIL +      L+  Y + G ++ A +  +++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G++ +   +++L++   K   +D A+ L+ E +    VPDV  F  LI GL + G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +    ++ M      P + + ++LI+G  +   IS   +  L K D    G  SP+ + 
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD--LLKEDMLIKG-VSPDVIT 287

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +II   C  G +  AS+LF +M S  ++P++ T+  ++ G  +   M   M++   M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS-------------ETEGH 582
            +G +PD V    ++ GY   G++    +  E +K   +  +             E    
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 583 TTRSFLGHLKPT 594
             R+FL HLK +
Sbjct: 408 EARNFLRHLKSS 419



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 5/315 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ L+   CK G    A  +   M    I PD     +L+     +G+L+ A+  L ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           +  GI  +   YN+L++   K+  +++A+ +  +  E    P+V +F+ LI G C+ G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE-MLEAKITPSVFTVSS 439
           D A   +  M      PD+V +  LI+G  +   + +   L KE ML   ++P V T +S
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I G  K G +  A   F    D+       PN   +  +I      G +  A  ++  M
Sbjct: 291 IISGYCKLGDMKAASELF----DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                 PD  T+T+++ G  R   +   + L  +M    + P+     V++    +   +
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 560 KSAFRCSEFLKESRI 574
           + A      LK S +
Sbjct: 407 REARNFLRHLKSSEV 421


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 209/402 (51%), Gaps = 5/402 (1%)

Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
           TY +L+   C  G    A  +FD M   GI P   I  +L+       K+  A++    +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
              G+  + + YN L++   K   V+ A+  + E L     P+V +F +L+ GLC++GE+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE-MEKFEISPDVFTYNI 299
             A  FF +M  FG FP+I  YN LI+G C+   + +   L  E M    +SPDV TY  
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 300 LIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG 359
           +I G C +G ++ A  L  +M   GI  N  T+N LIDG+ K G+M  A+ +  +M   G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 360 VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETL 419
             P+VVTF+SLIDG C+ G ++  + L+ EM +++L P+V  +  LI+ L K+  ++E  
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 420 RLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAI 479
              + +  +++ P  F  + +I G  K G++  A NF + +  +     C P+ + +  +
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA-NFIVAEMQEKK---CRPDKITFTIL 466

Query: 480 IQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRA 521
           I   C  G++++A   F  M   N  PD  T  +++  LL+A
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 209/397 (52%), Gaps = 5/397 (1%)

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
            I  T   Y +L+  LC       A+ +F  MR  G++P+      L+  Y ++  ++ A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
             F +E+  + ++ +   +  L++ L K   +  A   F    +    P+++ +N LI G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK-MYKEGILA 327
            C+ G + +A      M  F   PD+ +YN LI G C V ++     LL++ M  +G+  
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +V+TY S+I GYCK GDM+ A  +  +M   G++PN  TF+ LIDG  K GN+ +AM +Y
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +M++   +PDVV FT+LIDG  ++G + + L+L++EM    ++P+V+T + LI+ L K 
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
            RI  A NF              P   +Y  +I   C  G++ +A+ + ++M+    RPD
Sbjct: 404 NRIREARNFL----RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
             T+T ++ G     RM++ +     MI++  VPD +
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEI 496



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 204/383 (53%), Gaps = 8/383 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRK-----IEVLPAIQACNALLNGLIKKGKFDSVWE 105
           + S+   L+ +++ MG ++ A     +     I+V P +   N LLN L+K+   D    
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVY--NNLLNMLVKQNLVDEAVL 200

Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
            + E +    V DV ++ +LI   C  G++ KA   F  M + G  P +V Y  LI+G C
Sbjct: 201 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 260

Query: 166 NENKMVEAESMFR-SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
             N++ +   + +  M   GV P++ TY +++ GYCK+ D+  A E + EM+   ++PN 
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
            TF VL+DG  KVG +R+A   +  M   G  P++  +  LIDG+C+ G + + + L  E
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
           M+   +SP+V+TY +LI  LC   ++  A   L+ +    ++     YN +IDG+CK G 
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
           +++A  + ++M EK   P+ +TF+ LI G C  G +  A+  + +M+  + VPD +   +
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 405 LIDGLSKDGNMKETLRLYKEMLE 427
           LI  L K G   E  ++ +  L+
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQ 523



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 209/407 (51%), Gaps = 5/407 (1%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L+  L K G  DS    ++ M   G++ D     +L+      G +  A N  +E+   G
Sbjct: 115 LMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYG 174

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I+ +  +Y  L++ L  +N + EA  +FR   E   VP++Y++N L+ G C++ ++++A 
Sbjct: 175 IKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAF 234

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH-MAKFGVFPNIFVYNCLIDG 268
           EF+  M +    P++V++  L++G C+V E+    +     M   GV P++  Y  +I G
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294

Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
           +CK G++  A  L  EM    I P+ FT+N+LI G   VG +  A  + +KM   G L +
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354

Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
           VVT+ SLIDGYC+EG++ + L +  +M  + + PNV T++ LI+  CK   I  A     
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414

Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
            +    +VP   ++  +IDG  K G + E   +  EM E K  P   T + LI G    G
Sbjct: 415 HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKG 474

Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           R+  A++ F +  +      C P+ +   ++I  L   G   +AS++
Sbjct: 475 RMVEAISTFYKMIEIN----CVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 190/374 (50%), Gaps = 1/374 (0%)

Query: 76  RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
           R   +LP       L++   + GK DS   F  E+   G+      Y  L++    Q  V
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLV 195

Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
            +A+ LF E ++    P V  + ILI GLC   ++ +A   F++M   G  P++ +YN L
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255

Query: 196 MDGYCKVADVNRALEFYHE-MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           ++G+C+V ++++  +   E ML   + P+V+T+  ++ G CK+G+++AA   F  M   G
Sbjct: 256 INGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           + PN F +N LIDG  K GN+  AM +  +M      PDV T+  LI G C  G++    
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L ++M    +  NV TY  LI+  CKE  + +A +    +    V P    ++ +IDG 
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CKAG +D A  +  EM  K   PD + FT LI G    G M E +  + +M+E    P  
Sbjct: 436 CKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495

Query: 435 FTVSSLIHGLFKNG 448
            T++SLI  L K G
Sbjct: 496 ITINSLISCLLKAG 509



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 174/329 (52%), Gaps = 10/329 (3%)

Query: 48  PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           P F P V+S   LI     +G I++A   ++ +      P I + N L+NG  +  +   
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267

Query: 103 VWEFY-EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
             +   E+M++ G+  DV+TY  +I   C  GD+  A  LFDEM+  GI+P    + +LI
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
            G      M  A  M+  M   G +P++ T+ +L+DGYC+  +VN+ L+ + EM   NL 
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
           PNV T+ VL++ LCK   +R A NF  H+    V P  F+YN +IDG CKAG + EA  +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            +EM++ +  PD  T+ ILI G C  G++  A     KM +   + + +T NSLI    K
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
            G   +A    SQ+ +  ++   +  SSL
Sbjct: 508 AGMPNEA----SQIKQAALQKLNLGLSSL 532



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 16/312 (5%)

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           TY++L++ LC VG  + A+ +   M  +GIL +      L+  Y + G ++ A +  +++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
              G++ +   +++L++   K   +D A+ L+ E +    VPDV  F  LI GL + G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
            +    ++ M      P + + ++LI+G  +   IS   +  L K D    G  SP+ + 
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD--LLKEDMLIKG-VSPDVIT 287

Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
           Y +II   C  G +  AS+LF +M S  ++P++ T+  ++ G  +   M   M++   M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS-------------ETEGH 582
            +G +PD V    ++ GY   G++    +  E +K   +  +             E    
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407

Query: 583 TTRSFLGHLKPT 594
             R+FL HLK +
Sbjct: 408 EARNFLRHLKSS 419



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 5/315 (1%)

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y+ L+   CK G    A  +   M    I PD     +L+     +G+L+ A+  L ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
           +  GI  +   YN+L++   K+  +++A+ +  +  E    P+V +F+ LI G C+ G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE-MLEAKITPSVFTVSS 439
           D A   +  M      PD+V +  LI+G  +   + +   L KE ML   ++P V T +S
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +I G  K G +  A   F    D+       PN   +  +I      G +  A  ++  M
Sbjct: 291 IISGYCKLGDMKAASELF----DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
                 PD  T+T+++ G  R   +   + L  +M    + P+     V++    +   +
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 560 KSAFRCSEFLKESRI 574
           + A      LK S +
Sbjct: 407 REARNFLRHLKSSEV 421


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 212/412 (51%), Gaps = 9/412 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK  +   +VF A L +    + +  VFS LI
Sbjct: 23  MIHFLCTHQMLPEAKNLIQVVV-----SRKGKNSASAVFAAILETQGTQRSDIYVFSGLI 77

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +       C  +L  L+K   F  VW FY+E++ CG  
Sbjct: 78  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYP 137

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A +  + +L+   C +GD+  AL++FD +   G+ P+VV +  L++G      + E   +
Sbjct: 138 ASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 197

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   GV P++YTY+ L++G CK + ++ A E + EML   L PN VTF  L+DG CK
Sbjct: 198 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 257

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M    + P++  YN LI G CK G+L +A  L  EM    + PD  +
Sbjct: 258 NGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKIS 317

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G LE A    ++M +E I  + V Y +LI G C+EG    A  +  +M 
Sbjct: 318 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREML 377

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             G+ P+  T++ +I+  CK G++     L  EM     VP VV +  L++G
Sbjct: 378 SVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 185/364 (50%), Gaps = 4/364 (1%)

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           + +++ LI        + +A   +R  RE        T   +++   K+        FY 
Sbjct: 70  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYK 129

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  +N L++G+ + G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
           +L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++ N VT+ 
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
           +LIDG+CK G ++ A+ V  QM  + + P+++T+++LI G CK G++  A  L  EM +K
Sbjct: 250 TLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
            L PD + +T LIDG  K+G+++      K M++  I       ++LI GL + GR  +A
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369

Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
                E           P+   Y  II   C  G +   SKL  +M+ D   P   TY  
Sbjct: 370 EKMLREMLSVG----LRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 425

Query: 514 MLRG 517
           ++ G
Sbjct: 426 LMNG 429



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 205/418 (49%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESM----------------FRSMRECGVV--PNLYTYNA 194
           T+  Y  +IH LC    + EA+++                F ++ E       ++Y ++ 
Sbjct: 16  TLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSG 75

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H       T   +++ L K+   +    F+  + + G
Sbjct: 76  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECG 135

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A+S+   + K+ + P V ++N L+ G   +G L+   
Sbjct: 136 YPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 195

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M+  G+  +V TY+ LI+G CKE  M+ A  +  +M +KG+ PN VTF++LIDG 
Sbjct: 196 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 255

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM    + P  
Sbjct: 256 CKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDK 315

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            + ++LI G  K G +  A     E   +        + V Y A+I  LC +G+ + A K
Sbjct: 316 ISYTTLIDGCCKEGDLETA----FEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEK 371

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  LRPD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 372 MLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A+ ++  +    L P VV F  L++G  + G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K  ++ +A   F E  DK       PN 
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG----LVPNG 245

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 305

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD +    ++ G  + GDL++AF
Sbjct: 306 MRMKGLKPDKISYTTLIDGCCKEGDLETAF 335


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 222/447 (49%), Gaps = 44/447 (9%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + + L   +++  A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 25  MIHFLCTHQMFSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 79

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + ++      C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 139

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C +  +  A+S+
Sbjct: 140 A-----------------------------------SLYFFNILMHRFCKDGDIRVAQSV 164

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ +YN LM+GY ++ D++        ML   +QP+  T+ VL++GLCK
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCK 224

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK G +  AM +   M    + PD+ T
Sbjct: 225 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLIT 284

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  + +TY +LIDG CKEGD++ A     +M 
Sbjct: 285 YNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 344

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ +  + V +++LI G C+ G    A  +  EM+   L PD   +T +I+   K G++ 
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 404

Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHG 443
           +  RL KEM      PSV T + L++G
Sbjct: 405 KGSRLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 191/371 (51%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE  +     T   +++   K+    
Sbjct: 65  KGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFK 124

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 184

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PD +TY++LI GLC   +++ A  L  +M  +G++
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK+G ++ A+ +  +M  + + P+++T+++LI G CK G++  A  L
Sbjct: 245 PNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDL 304

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EMV+K L PD + +T LIDG  K+G++       K M++  I       ++LI GL +
Sbjct: 305 IDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ 364

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+   Y  II   C  G + K S+L  +M+ +   P
Sbjct: 365 EGRSVDAEKMLREMLSVG----LKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVP 420

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 421 SVVTYNVLMNG 431



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 202/418 (48%), Gaps = 22/418 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC      EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 18  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 77

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H L     T   +++ L K+   +    F+  + + G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+   
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M   G+  +  TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG 
Sbjct: 198 RLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y  M+ +SL+PD++ +  LI GL K G++K+   L  EM+   + P  
Sbjct: 258 CKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDK 317

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G +  A     E   +        + V Y A+I  LC +G+ + A K
Sbjct: 318 ITYTTLIDGCCKEGDLDTA----FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           +  +M S  L+PD  TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 374 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P  +T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNG 247

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C  G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 248 VTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE 307

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M+  G+ PD +    ++ G  + GDL +AF
Sbjct: 308 MVMKGLKPDKITYTTLIDGCCKEGDLDTAF 337


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 204/381 (53%), Gaps = 15/381 (3%)

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            L+ EM+++ +   +  + ++I+  C    + EA+     M + G+ P+ +T  + + GY
Sbjct: 178 QLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGY 237

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           C+  DV+ A   + EM +     N V++  L+ GLC+ G +  A + FV M     +PN+
Sbjct: 238 CRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNV 293

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
           + Y  LI G C+  N+ +AM L  EM +  + PD+ TYN LI G C  G L+ A  LL  
Sbjct: 294 YTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSL 352

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M + G++ +  TY   ID  CK   +E+A  +   +TE+GV  NV+ +S LIDG CK G 
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           +D A  L+ +M+ K+  P+   F ALI GL   GN+KE L L+ +M++  + P+V+T + 
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472

Query: 440 LIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
           LI  + K G   +A   L   +   +K       P    Y A I+  C  G++ +A  + 
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEK-------PVARTYNAFIEVYCSAGKVQEAEDMM 525

Query: 497 SDMRSDNLRPDNCTYTTMLRG 517
             M+ + + PD+ TYT++++ 
Sbjct: 526 VQMKEEGVPPDDFTYTSLIKA 546



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 234/511 (45%), Gaps = 14/511 (2%)

Query: 50  FNPSVFST--LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
            +P  F++   I+ +     ++ A  V+ ++     + + N L++GL + G+ D     +
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV-SYNQLIHGLCEAGRIDEAVSLF 281

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             M       +V TY  LI   C + +V KA+ L DEM+++ + P ++ Y  LI G C  
Sbjct: 282 VRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRA 340

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
             +  A  +   M+E G+VP+  TY   +D  CK   V  A   +  +    +  NV+ +
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
            VL+DG CKVG++  AG  F  M      PN + +N LI G C AGNL EA+SL  +M K
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK 460

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
             + P V+T+NILI  +   G  + A   LQKM   G      TYN+ I+ YC  G +++
Sbjct: 461 MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQE 520

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A  +  QM E+GV P+  T++SLI    K G   +A  +   M      P    F +LI 
Sbjct: 521 AEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIK 580

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L             + ++E      V +VS+       N       +  +E  ++ +  
Sbjct: 581 QLFDK----------RYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKH 630

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
            C+P+   Y  +I  +C    +  A KL   M+ + + P    +  ++    + ++  + 
Sbjct: 631 GCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEA 690

Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
             ++ DMI  G  P     + ++ G  E G+
Sbjct: 691 ANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 235/525 (44%), Gaps = 37/525 (7%)

Query: 46  EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDS 102
           E+P  N   ++ LI    E G I+EA+ ++ +++     P +    AL+ GL +K    +
Sbjct: 252 EMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKA 311

Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
           +    +EM+   LV D++TY  LI   C  G +  A  L   M ++G+ P    Y   I 
Sbjct: 312 MG-LLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370

Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
            LC  N++ EA  +F S+ E GV  N+  Y+ L+DGYCKV  V+ A   + +ML  N  P
Sbjct: 371 FLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           N  TF  L+ GLC  G L+ A + F  M K G+ P ++ +N LI    K G+  +A    
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            +M      P   TYN  I+  C  G+++ AE ++ +M +EG+  +  TY SLI  Y K 
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLID-----------------------GQCKAGN 379
           G    A  V   M +   EP+  TF SLI                        G     N
Sbjct: 551 GLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSN 610

Query: 380 I------DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
           +      D  + L+ EM      PD   +  LI G+ K  N+   L+L  +M +  I+PS
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670

Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
               +++I    K  +   A N      D    G+ SP       +I  L  +G+  + +
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIV---EDMICSGH-SPQLEHCKTLICGLYEEGETERGN 726

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
            +F  +R      D   +  ++ G+L+   + +   L  +M K G
Sbjct: 727 SVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 229/479 (47%), Gaps = 14/479 (2%)

Query: 115 LVADVVTYGV-LIDCCCGQGDVMKALNLFDEMIDKGIEP-TVVIYTILIHGLCNENKMVE 172
           +V+DV    V +I CC    D +   ++  +M    I   ++  Y  L+  L     + E
Sbjct: 116 IVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDE 175

Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
              ++  M E  V  ++YT+N +++ YCK+  V  A +F  +M+   L P+  T    + 
Sbjct: 176 MNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL 235

Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
           G C+  ++ +A   F  M       N   YN LI G C+AG + EA+SL   M+     P
Sbjct: 236 GYCRSKDVDSAFRVFEEMPN----RNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYP 291

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           +V+TY  LIKGLC    +  A GLL +M +  ++ +++TYNSLI G C+ G ++ A  + 
Sbjct: 292 NVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLL 350

Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
           S M E+G+ P+  T+   ID  CK+  ++ A  L+  +  + +  +V++++ LIDG  K 
Sbjct: 351 SLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV 410

Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
           G + E   L+++ML    +P+ +T ++LIHGL   G +  AL+ F    D+       P 
Sbjct: 411 GKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF----DQMVKMGLKPT 466

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
              +  +I  +   G    A K    M S   +P   TY   +     A ++ +   ++ 
Sbjct: 467 VYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMV 526

Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
            M + G+ PD      +++ Y + G   SAF   + LK       E   HT  S +  L
Sbjct: 527 QMKEEGVPPDDFTYTSLIKAYGKLGLTYSAF---DVLKSMFDADCEPSHHTFLSLIKQL 582



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 184/401 (45%), Gaps = 16/401 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N  ++S LI  + ++G ++EA  ++ K+      P     NAL++GL   G        +
Sbjct: 396 NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF 455

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           ++MV  GL   V T+ +LI     QGD   A     +M+  G +P    Y   I   C+ 
Sbjct: 456 DQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSA 515

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EAE M   M+E GV P+ +TY +L+  Y K+     A +    M   + +P+  TF
Sbjct: 516 GKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTF 575

Query: 228 GVLMDGLC-KVGELRAAGNFFVH-MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
             L+  L  K   +  +G   V  ++ FG  P   ++        K       + L  EM
Sbjct: 576 LSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW--------KMMEFDIVIELFEEM 627

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
           EK   +PD   Y  LI G+C V  L  A  LL +M KEGI  + + +N++I   CK    
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            +A ++   M   G  P +    +LI G  + G  +    ++ ++       D + +  L
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747

Query: 406 IDGLSKDGNMKETLRLYKEMLE--AKITPSVFTV-SSLIHG 443
           IDG+ K G ++E  +L++EM +     +P  +++ +  +HG
Sbjct: 748 IDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 263/553 (47%), Gaps = 14/553 (2%)

Query: 36  YSVFNALNSL--EIPKFNPSVFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNAL 90
           + +F  + SL   +P  N   ++TLI A+   G I  A   L       + P   A  + 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 91  LNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI 150
           + G  + G        +  M L G +    TY  L+    G G V +A+ +F  M     
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
            P   +Y  ++HGLC   +  EAE +       G  PN+  YNAL+DGYC   ++  AL+
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
            +  M  +   PNV T+  L+ GLCK G++  A   F  M + G+ PN+  Y  LI G C
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVV 330
             G+L  A  L   ME   + P+ +T+++LI  LC   ++E A+  L  + K+G+  N V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 331 TYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
            Y SLIDG CK G ++ A  +  +M  +G  P+  ++SSLIDG C+   +  A  +  +M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 391 VIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRI 450
           + K +    V +T +ID L ++   +   +++ +M+   I P + T +  +    + GR+
Sbjct: 414 MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473

Query: 451 SNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCT 510
            +A +  ++  D+  G +  PN V Y  +I+     G + +A   F  M     +P+  +
Sbjct: 474 EDAESMIVQMVDR--GVF--PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 511 YTTMLRGLLR---AKRMLDVMMLLADMIKMGIVP-DAVINQVMVRGYQENGDLKSAFRCS 566
           YT +LR +++   +   +D+   +ADM  +     D ++ ++++ G  + G +       
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWK-IADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLL 588

Query: 567 EFLKESRIGSSET 579
             +KE     S T
Sbjct: 589 SVMKEHGYQPSNT 601


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 250/551 (45%), Gaps = 50/551 (9%)

Query: 52  PSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           P  F  +++++S  G + +A+ V    +K  V P +  CN  ++ L+   +      F E
Sbjct: 281 PEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAE 340

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            MVL G+  +VVTY  LI   C    V +A+ L D+M  KG  P  V Y  ++  LC + 
Sbjct: 341 RMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDK 400

Query: 169 KMVEAESMFRSMR-ECGVVPNLYTYNALMD------------------------------ 197
           ++ E   + + M+ +  ++P+  TYN+L+                               
Sbjct: 401 RLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEY 460

Query: 198 -----GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
                 YCK   + +A E   EM      P+VVT+  ++DG C++G+L  A      M K
Sbjct: 461 SAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYK 520

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
               PN   Y   ++G C+ G   EA  + +  E+   +P+  TY++++ GL   G+L  
Sbjct: 521 HHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNE 580

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  ++++M  +G   N V  N L+   C++G   +A  +  +   KG   NVV F+++I 
Sbjct: 581 ACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIH 640

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G C+  +++AA+ L  +M + +  PD V +TALID L+K   ++E   L  +ML   + P
Sbjct: 641 GFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVP 700

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           S  T  S+IH   + GR+ + L    +   K      S     Y  +I+ LC  G + +A
Sbjct: 701 SPVTYRSVIHQYCRKGRVEDLLKLLKKMLLK------SRFQTAYNLVIEKLCKFGYLEEA 754

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD-----AVINQ 547
           + L  ++     R D  T   ++   L     +    +   M    ++PD      V  +
Sbjct: 755 NSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKR 814

Query: 548 VMVRGYQENGD 558
           ++V G  E  D
Sbjct: 815 LVVEGKLEEAD 825



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 175/445 (39%), Gaps = 102/445 (22%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M    +Q     FG +M    + G LR A      M K GV PN+ + N  I        
Sbjct: 272 MTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNE 331

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG---------- 324
           L +A+     M    I+P+V TYN LIKG C V Q++ A  L+ +M  +G          
Sbjct: 332 LKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYT 391

Query: 325 --------------------------ILANVVTYNSLID--------------------- 337
                                     +L + VTYNSLI                      
Sbjct: 392 VMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKL 451

Query: 338 --------------GYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
                          YCKEG ++KA  + S+M  KG +P+VVT++S++DG C+ G +D A
Sbjct: 452 RFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQA 511

Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
             +  +M      P+ V +T  ++GL ++G   E  ++     E   TP+  T S ++HG
Sbjct: 512 KKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHG 571

Query: 444 LFKNGRISNALNFFLEKTDK-----------------TDGGY--------------CSPN 472
           L + G+++ A +   E   K                  DG                C+ N
Sbjct: 572 LRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVN 631

Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
            V +  +I   C    +  A  L  DM   N  PD  TYT ++  L +  R+ +   L  
Sbjct: 632 VVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTM 691

Query: 533 DMIKMGIVPDAVINQVMVRGYQENG 557
            M++ G+VP  V  + ++  Y   G
Sbjct: 692 KMLRQGLVPSPVTYRSVIHQYCRKG 716



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 52/307 (16%)

Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
           D   Y ++++ L      +GA+ +L+ M +  I      +  ++  Y + G +  A+ V 
Sbjct: 245 DSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVL 304

Query: 353 SQMTEKGVE-----------------------------------PNVVTFSSLIDGQCKA 377
           + M + GVE                                   PNVVT++ LI G C  
Sbjct: 305 TLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNV 364

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM-LEAKITPSVFT 436
             +D AM L  +M  K   PD V +  ++  L +D  + E   L K+M  ++K+ P   T
Sbjct: 365 HQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVT 424

Query: 437 VSSLIHGLFKNGRISNALNFFLE------KTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
            +SLI  L K+G    AL    E      K DK +          Y+AI+ A C +G+I 
Sbjct: 425 YNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVE----------YSAIVHAYCKEGKIQ 474

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           KA +L S+M S    PD  TYT++L G  R  ++     ++  M K    P+AV     +
Sbjct: 475 KAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFL 534

Query: 551 RGYQENG 557
            G   NG
Sbjct: 535 NGLCRNG 541


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 211/412 (51%), Gaps = 9/412 (2%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLI 59
           + + L   ++   A+ LI+ V      SRK      +VF A+  +    + +  VFS LI
Sbjct: 6   MIHFLCTQQMLSEAKSLIQVVV-----SRKGKGSASAVFAAIVETKGTQRSDLYVFSGLI 60

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +       C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 61  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A +  + +L+   C  GD+  A ++FD +   G+ P+VV Y  L++G      + E   +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
             +M   GV P++YTY+ L++G CK + ++ A E + EML   L PN VTF  L+DG CK
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
            G +  A   +  M    + P++  YN LI G CK G+L +A  L  EM   E+ PD  T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKIT 300

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           Y  LI G C  G L+ A    ++M +E I  + V Y +LI G C+EG    A  +  +M 
Sbjct: 301 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 360

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
             G++P+  T++ +I+  CK G++     L  EM     VP VV +  L++G
Sbjct: 361 NVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE        T   +++   K+    
Sbjct: 46  KGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFK 105

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  YN L+
Sbjct: 106 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 165

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L S M    + PDV+TY++LI GLC   +++ A  L  +M  +G++
Sbjct: 166 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 225

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G CK G++  A  L
Sbjct: 226 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 285

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM +K L PD + +T LIDG  K+G++       K M++  I       ++LI GL +
Sbjct: 286 IDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQ 345

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E  +        P+   Y  II   C  G + K SKL  +M+ D   P
Sbjct: 346 EGRSVDAEKMLREMLNVG----LKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 401

Query: 507 DNCTYTTMLRG 517
              TY  ++ G
Sbjct: 402 SVVTYNVLMNG 412



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 204/414 (49%), Gaps = 22/414 (5%)

Query: 157 YTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNALMDG 198
           Y  +IH LC +  + EA+S+ +   S +  G                  +LY ++ L+  
Sbjct: 3   YCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLITA 62

Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
           Y +   +  A+E Y     H       T   +++ L K+   +    F+  + + G   +
Sbjct: 63  YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 122

Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
           ++ +N L+   CK G++  A S+   + K+ + P V +YN L+ G   +G L+    L  
Sbjct: 123 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 182

Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
            M   G+  +V TY+ LI+G CKE  M+ A  +  +M  KG+ PN VTF++LIDG CK G
Sbjct: 183 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242

Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            +D AM +Y +M+ +SL PD++ +  LI GL K G++K+   L  EM   ++ P   T +
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYT 302

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           +LI G  K G + +A     E   +        + V Y A+I  LC +G+ + A K+  +
Sbjct: 303 TLIDGCCKEGDLDSA----FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 358

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
           M +  L+PD+ TYT ++    +   +     LL +M + G VP  V   V++ G
Sbjct: 359 MLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV +  L++G  + G
Sbjct: 113 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 172

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   ML + + P V+T S LI+GL K  ++ +A   F E   K       PN 
Sbjct: 173 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG----LVPNG 228

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL +   +     L+ +
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M    + PD +    ++ G  + GDL SAF
Sbjct: 289 MSMKELKPDKITYTTLIDGCCKEGDLDSAF 318


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 251/539 (46%), Gaps = 32/539 (5%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
           VFS L++AFS+ G +++A  +   +E   V    +   +L+ G +K+ + D     +++M
Sbjct: 137 VFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKM 196

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
              G   D+  Y V+I   C   DV KAL L+ EM    I+P V I T LI     E ++
Sbjct: 197 KKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEEL 256

Query: 171 VEAESMFRSMRECGVVPNLYT--YNALMDGYCKVADVNRALEFYHEMLHHN--------- 219
                 F  M E  + P   T  YN++++       V++A      +   N         
Sbjct: 257 T---CFFEEMHE-DMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGK 312

Query: 220 -------LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
                  + PN  TF ++++GL K G+L  A   F  MA+ G  P++ +YN LIDG C +
Sbjct: 313 LFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTS 372

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
             L E+  L  EME+  I P  FT N +   LC    + GA  LL+KM   G +  +   
Sbjct: 373 NRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHS 432

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            SL+   CK G   +A      M E+G +P++V +S+ +DG  K   +D A+ L+ ++  
Sbjct: 433 TSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICA 492

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           +   PDV+ +  LI GL K   + E   L  EM E  + PS  T ++LI GL K   +  
Sbjct: 493 QGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A+ F     +K       PN + Y+ +I  LC  G+   A  L+++M      P +  Y 
Sbjct: 553 AMLFLSMMIEKER----EPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYM 608

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
             + GL    R  + ++ L +M +  + PD  +   ++  +  + +   AF   E L+E
Sbjct: 609 AFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAF---EILQE 664



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 196/392 (50%), Gaps = 16/392 (4%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVAD----------------VVTYGVLIDCCCG 131
           N++LN L+  G     +   + + +   + D                  T+ ++I+    
Sbjct: 277 NSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIK 336

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            GD+  A+ LF +M   G +P +++Y  LI GLC  N++ E+  + + M E G+ P  +T
Sbjct: 337 TGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFT 396

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
            N +    C+  D++ AL    +M  H   P +     L+  LCK G+   A  F V MA
Sbjct: 397 NNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMA 456

Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
           + G  P+I  Y+  +DG  K   + +A+ L  ++      PDV  YNILIKGLC   ++ 
Sbjct: 457 EEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIA 516

Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
            A+ LL +M ++G++ + VTYN+LIDG CK   +E+A+   S M EK  EPNV+T+S+LI
Sbjct: 517 EAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLI 576

Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
           +G C AG  D A+ L+ EM  K   P  + + A I GLS  G   E L   +EM E ++ 
Sbjct: 577 NGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMK 636

Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           P  +    L++    +     A     E  DK
Sbjct: 637 PDTYVYVGLLNAFLVDSNQPLAFEILQEMVDK 668



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 182/389 (46%), Gaps = 5/389 (1%)

Query: 77  KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
           K  V P     + ++NGLIK G  D     + +M   G   D++ Y  LID  C    + 
Sbjct: 317 KAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQ 376

Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
           ++  L  EM + GIEPT      +   LC  + +  A  + + MR  G VP +    +L+
Sbjct: 377 ESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLV 436

Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
              CK      A +F  +M     QP++V +   +DGL K+ E+  A   F  +   G  
Sbjct: 437 KELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYC 496

Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
           P++  YN LI G CK   + EA +L  EME+  + P   TYN LI GLC    LE A   
Sbjct: 497 PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLF 556

Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
           L  M ++    NV+TY++LI+G C  G  + AL + ++M  KG  P+ + + + I G   
Sbjct: 557 LSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSN 616

Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV-- 434
            G  + A+    EM  + + PD  V+  L++    D N      + +EM++    P +  
Sbjct: 617 CGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHD 676

Query: 435 ---FTVSSLIHGLFKNGRISNALNFFLEK 460
               +V + I    ++ R S+++   L K
Sbjct: 677 KNHISVRNAILKFSEDARTSSSIKNLLAK 705



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 226/506 (44%), Gaps = 50/506 (9%)

Query: 73  WVYRKIEVLPAIQA-CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCG 131
           W + K  + P +Q  CN          +FD   + + E+   G V + V + +L+     
Sbjct: 97  WGFDKYTLTPVLQVYCNM--------AEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSK 147

Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
            G V KA  L + M +K +      +  LI+G   E+++ +A  +F  M++ G  P++  
Sbjct: 148 WGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISL 207

Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA--------- 242
           Y+ ++ G C   DV +AL  Y EM    +QP+V     L+    K  EL           
Sbjct: 208 YDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDM 267

Query: 243 ----------------AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
                             N  VH A + +   I + NC+ DG  + G LF   ++     
Sbjct: 268 DPKASTLLYNSVLNSLVDNGSVHKA-YHLLQAITIGNCIGDG--EIGKLFRGKAM----- 319

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              + P+  T++I+I GL   G L+ A GL + M + G   +++ YN+LIDG C    ++
Sbjct: 320 ---VPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQ 376

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
           ++  +  +M E G+EP   T + +    C+  +I  A+ L  +M I   VP +   T+L+
Sbjct: 377 ESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLV 436

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
             L K G   E  +   +M E    P +   S+ + GL K   +  AL  F    D    
Sbjct: 437 KELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLF---QDICAQ 493

Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
           GYC P+ + Y  +I+ LC   +I +A  L  +M    L P   TY T++ GL +   + +
Sbjct: 494 GYC-PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552

Query: 527 VMMLLADMIKMGIVPDAVINQVMVRG 552
            M+ L+ MI+    P+ +    ++ G
Sbjct: 553 AMLFLSMMIEKEREPNVITYSTLING 578



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 217/471 (46%), Gaps = 60/471 (12%)

Query: 144 EMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           EM D G        T ++   CN  +  +A  +F  + + G V   Y ++ L+  + K  
Sbjct: 91  EMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDE-YVFSILVLAFSKWG 149

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYN 263
            V++A E    M   N++ N  TF  L+ G  K   +  A + F  M K G  P+I +Y+
Sbjct: 150 KVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYD 209

Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
            +I G C   ++ +A+ L SEM+ F+I PDV    I+ K +    + E      ++M+++
Sbjct: 210 VIIGGLCVNKDVKKALCLYSEMKGFKIQPDV---KIVTKLISSFSKEEELTCFFEEMHED 266

Query: 324 -GILANVVTYNSLIDGYCKEGDMEKALSVCSQMT--------EKG--------VEPNVVT 366
               A+ + YNS+++     G + KA  +   +T        E G        V PN  T
Sbjct: 267 MDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTT 326

Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
           FS +I+G  K G++D A+GL+ +M      PD++++  LIDGL     ++E+  L +EM 
Sbjct: 327 FSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEME 386

Query: 427 EAKITPSVFT-----------------------------------VSSLIHGLFKNGRIS 451
           E+ I P+ FT                                    +SL+  L K+G+  
Sbjct: 387 ESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEV 446

Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
            A  F +   D  + G+  P+ V Y+A +  L    ++ +A KLF D+ +    PD   Y
Sbjct: 447 EACKFLV---DMAEEGF-QPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAY 502

Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             +++GL + +R+ +   LL +M + G+VP AV    ++ G  +   L+ A
Sbjct: 503 NILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEA 553



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 28/368 (7%)

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGV-FPNIFVYNCLIDGHCKAG--NLFEAMSLC 282
             G L+  L   G +  A   F  + K G+  PN + Y CL++   K+   +L E M L 
Sbjct: 32  ALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLE-MRL- 89

Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
            EM       D +T   +++  C + + + A  +  +++  G +   V ++ L+  + K 
Sbjct: 90  KEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKW 148

Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
           G ++KA  +   M EK V  N  TF SLI G  K   +D A+ L+ +M      PD+ ++
Sbjct: 149 GKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLY 208

Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
             +I GL  + ++K+ L LY EM   KI P V  V+ LI    K   ++    FF E  +
Sbjct: 209 DVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELT---CFFEEMHE 265

Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN----------------LRP 506
             D      + +LY +++ +L  +G + KA  L   +   N                + P
Sbjct: 266 DMDP---KASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPP 322

Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCS 566
           ++ T++ ++ GL++   +   + L  DM ++G  PD ++   ++ G   +  L+ +    
Sbjct: 323 NSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLL 382

Query: 567 EFLKESRI 574
           + ++ES I
Sbjct: 383 QEMEESGI 390


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 223/469 (47%), Gaps = 40/469 (8%)

Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL------------------------- 164
           C  G+  ++L     +++KG +P VV+ T LIHGL                         
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLI 127

Query: 165 ---------CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
                    C  N++  A  +   M+  G  P++ TYN L+   C    ++ ALEF +++
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           L  N +P VVT+ +L++     G +  A      M +  + P++F YN +I G C+ G +
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  + S +     +PDV TYNIL++GL   G+ E    L+  M   G  ANVVTY+ L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C++G +E+ + +   M +KG++P+   +  LI   CK G +D A+ +   M+    
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VPD+V +  ++  L K     E L +++++ E   +P+  + +S+   L+  G    AL 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD--MRSDNLRPDNCTYTT 513
             LE  DK       P+ + Y ++I  LC DG + +A +L  D  M S   +P   +Y  
Sbjct: 428 MILEMLDKG----VDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
           +L GL +  R+ D + +LA M+  G  P+      ++ G    G L  A
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 218/420 (51%), Gaps = 6/420 (1%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P + A NA++ G  +  + DS ++  + M   G   D+VTY +LI   C +G +  AL  
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
            ++++ +  +PTVV YTILI     +  + EA  +   M E  + P+++TYN+++ G C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
              V+RA +    +      P+V+T+ +L+ GL   G+  A       M   G   N+  
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           Y+ LI   C+ G + E + L  +M+K  + PD + Y+ LI  LC  G+++ A  +L  M 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
            +G + ++V YN+++   CK+   ++ALS+  ++ E G  PN  +++S+       G+  
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY--KEMLEAKITPSVFTVSS 439
            A+G+  EM+ K + PD + + +LI  L +DG + E + L    EM  ++  PSV + + 
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           ++ GL K  R+S+A+       DK     C PN   Y  +I+ + + G +  A  L + +
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKG----CRPNETTYTFLIEGIGFGGCLNDARDLATTL 539



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 226/496 (45%), Gaps = 46/496 (9%)

Query: 96  KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
           K G F+    F   +V  G   DVV    LI        + KA+ +   + + G  P ++
Sbjct: 69  KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLI 127

Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
            Y  +I G C  N++  A  +   M+  G  P++ TYN L+   C    ++ ALEF +++
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187

Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
           L  N +P VVT+ +L++     G +  A      M +  + P++F YN +I G C+ G +
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
             A  + S +     +PDV TYNIL++GL   G+ E    L+  M   G  ANVVTY+ L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           I   C++G +E+ + +   M +KG++P+   +  LI   CK G +D A+ +   M+    
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
           VPD+V +  ++  L K     E L +++++ E   +P+  + +S+   L+  G    AL 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--------------- 500
             LE  DK       P+ + Y ++I  LC DG + +A +L  DM                
Sbjct: 428 MILEMLDKG----VDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 501 -----------SDNL-----------RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
                      SD +           RP+  TYT ++ G+     + D   L   ++ M 
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM- 542

Query: 539 IVPDAVINQVMVRGYQ 554
              DA+      R Y+
Sbjct: 543 ---DAISEHSFERLYK 555



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 7/347 (2%)

Query: 52  PSV--FSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEF 106
           P+V  ++ LI A    G I+EA+ +  +   I + P +   N+++ G+ ++G  D  ++ 
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
              +   G   DV+TY +L+     QG       L  +M+ +G E  VV Y++LI  +C 
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
           + K+ E   + + M++ G+ P+ Y Y+ L+   CK   V+ A+E    M+     P++V 
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVN 373

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           +  ++  LCK      A + F  + + G  PN   YN +       G+   A+ +  EM 
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML 433

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG--ILANVVTYNSLIDGYCKEGD 344
              + PD  TYN LI  LC  G ++ A  LL  M  E      +VV+YN ++ G CK   
Sbjct: 434 DKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
           +  A+ V + M +KG  PN  T++ LI+G    G ++ A  L T +V
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLV 540


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 221/426 (51%), Gaps = 11/426 (2%)

Query: 86  ACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM 145
            CN LL+  +K  + +    F++  +      D V+Y  L++     GDV KAL LF EM
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV-PNLYTYNALMDGYCKVAD 204
            D GI   +  + I++ GLC+  K+  A  +F+ M   G+  PNL +Y  ++DG CK   
Sbjct: 164 KDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRK 220

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           V++A+  + +M+   + P+VVT+G L+DGL K   ++ A + F      G  P +  YN 
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 265 LIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
           +IDG CK G +  A++L  +M  +  + PD+FTY+ LI GL    + E A  L ++M   
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQCKAGNIDA 382
           G   +VVTYN+L+DG CK G  +KA+ +  +M    V +PNV+T++ LID  CK   +  
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
           A+ L  EM  +SL+PD V FT +I  L K+  + E   L+ E +     P     ++++ 
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLA 459

Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
           G  K  RI +A        D+     C+P    Y A++   C  G+   A  ++ +M   
Sbjct: 460 GYCKITRIDDAKKLH----DRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEM 515

Query: 503 NLRPDN 508
              P+ 
Sbjct: 516 GFPPER 521



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 206/383 (53%), Gaps = 8/383 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
           ++TL+  F + G +++AL ++ +++   +  +++ N +L GL   GK    WE +++M  
Sbjct: 140 YNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDM-- 197

Query: 113 CGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
            G+ + ++++Y ++ID  C    V KA+ LF +M+DK I P VV Y  LI GL  + ++ 
Sbjct: 198 SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVK 257

Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVL 230
           EA  +F   R  G  P + TYN ++DG CK   +  AL  Y +M+   +L+P++ T+  L
Sbjct: 258 EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           ++GL        A   +  M   G  P++  YN L+DG CK+G   +AM +  +M    +
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNV 377

Query: 291 -SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             P+V TY +LI   C V +L  A  L ++M    +L + VT+ ++I   CKE  +++A 
Sbjct: 378 CDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAH 437

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   +  K  +P+ V F++++ G CK   ID A  L+  M+     P +  +TAL+ G 
Sbjct: 438 ELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGF 496

Query: 410 SKDGNMKETLRLYKEMLEAKITP 432
            + G   + L +Y EM+E    P
Sbjct: 497 CRTGRYSDALIMYHEMIEMGFPP 519



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 9/425 (2%)

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
            F   +    EP  V Y  L++G      + +A ++F  M++ G+   L ++N ++ G C
Sbjct: 124 FFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLC 182

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
               ++ A E + +M      PN++++ +++DGLCK  ++  A   F  M    ++P++ 
Sbjct: 183 SGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            Y  LIDG  K   + EA  L  E       P V TYN +I GLC  G++E A  L   M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301

Query: 321 YKEGIL-ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
            +E  L  ++ TY++LI+G       EKA  +  +M + G  P+VVT+++L+DG CK+G 
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361

Query: 380 IDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
            D AM ++ +M + ++  P+V+ +T LID   K   + + ++L KEM    + P   T +
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
           ++I  L K  RI  A   F     ++ G  C P+ VL+  ++   C   +I  A KL   
Sbjct: 422 TVIQKLCKESRIDEAHELF-----ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDR 476

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           M      P   TYT ++ G  R  R  D +++  +MI+MG  P+  + +++ R   ++  
Sbjct: 477 MLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELVDRTRTDHPP 536

Query: 559 LKSAF 563
            +  +
Sbjct: 537 PRRPY 541



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 228/439 (51%), Gaps = 16/439 (3%)

Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
           +A+++   V+     G+G + K+L L+ +++     P +V    +IH + + N   E   
Sbjct: 38  LAEIILRQVVDSKRAGEG-IEKSLGLYGDIL----VPDLV--GKVIHRIPDPNTAWEVFQ 90

Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
              + ++     N +T N L+  Y K   V  A  F+   + +  +P+ V++  LM+G  
Sbjct: 91  W--AGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFF 148

Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
           K G+++ A   F  M   G+   +  +N ++ G C  G +  A  +  +M     SP++ 
Sbjct: 149 KAGDVKKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLI 206

Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
           +Y I+I GLC   +++ A  L ++M  + I  +VVTY +LIDG  K+  +++A  +  + 
Sbjct: 207 SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA 266

Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS-LVPDVVVFTALIDGLSKDGN 414
             KG  P VVT++++IDG CK G I+ A+ LY +MV +  L PD+  ++ALI+GL+    
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNR 326

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
            ++   LY+EML+   +P V T ++L+ GL K+G    A+  F +      G  C PN +
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRK---MGVGNVCDPNVI 383

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            Y  +I   C   ++  A KL  +M   +L PD  T+TT+++ L +  R +D    L + 
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR-IDEAHELFES 442

Query: 535 IKMGIVPDAVINQVMVRGY 553
           I     PD+V+   M+ GY
Sbjct: 443 IGKTCKPDSVLFNTMLAGY 461



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 177/337 (52%), Gaps = 5/337 (1%)

Query: 66  GHIEEALWVYRKIEVL--PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
           G I  A  V++ +  +  P + +   +++GL K  K D     +++MV   +  DVVTYG
Sbjct: 185 GKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYG 244

Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RE 182
            LID    Q  V +A +LF+E   KG  PTVV Y  +I GLC   ++  A +++  M RE
Sbjct: 245 ALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVRE 304

Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
             + P+++TY+AL++G        +A E Y EML     P+VVT+  L+DGLCK G    
Sbjct: 305 PHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDK 364

Query: 243 AGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
           A   F  M    V  PN+  Y  LID  CK   L +A+ L  EME   + PD  T+  +I
Sbjct: 365 AMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVI 424

Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
           + LC   +++ A  L + + K     + V +N+++ GYCK   ++ A  +  +M + G  
Sbjct: 425 QKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCA 483

Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
           P + T+++L+ G C+ G    A+ +Y EM+     P+
Sbjct: 484 PTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 204/399 (51%), Gaps = 11/399 (2%)

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            ++ +A   F+S  +    P+  +YN LM+G+ K  DV +AL  + EM    +   + + 
Sbjct: 116 RRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSH 174

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
            +++ GLC  G++  A   F  M+  G+F PN+  Y  +IDG CK+  + +A++L  +M 
Sbjct: 175 NIVLRGLCSGGKISMAWEVFKDMS--GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMV 232

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
              I PDV TY  LI GL    +++ A  L ++   +G    VVTYN++IDG CK G +E
Sbjct: 233 DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIE 292

Query: 347 KALSVCSQMT-EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
            AL++   M  E  ++P++ T+S+LI+G   +   + A  LY EM+     PDVV +  L
Sbjct: 293 NALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTL 352

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKI-TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           +DGL K G   + + ++++M    +  P+V T + LI    K  R+ +A+    E     
Sbjct: 353 LDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE----M 408

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +G    P+ V +  +IQ LC + +I +A +LF  +     +PD+  + TML G  +  R+
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRI 467

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            D   L   M+  G  P       +V G+   G    A 
Sbjct: 468 DDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 9/283 (3%)

Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
           +E      +  KF  + + FT N L+       ++E A    Q   K     + V+YN+L
Sbjct: 86  WEVFQWAGKQSKF--THNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTL 143

Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
           ++G+ K GD++KAL++  +M + G+   + + + ++ G C  G I  A  ++ +M     
Sbjct: 144 MNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMS-GIF 201

Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
            P+++ +T +IDGL K   + + + L+K+M++  I P V T  +LI GL K  R+  A +
Sbjct: 202 SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYD 261

Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTM 514
            F E   K     C P  V Y  +I  LC  G+I  A  L+ DM R  +L+PD  TY+ +
Sbjct: 262 LFEEARAKG----CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
           + GL  + R      L  +M+  G  PD V    ++ G  ++G
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG 360



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
           N  T ++L+    KA  ++ A   +   +     PD V +  L++G  K G++K+ L L+
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
            EM ++ I   + + + ++ GL   G+IS A   F     K   G  SPN + Y  +I  
Sbjct: 161 GEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVF-----KDMSGIFSPNLISYTIMIDG 214

Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           LC   ++ KA  LF  M    + PD  TY  ++ GL + +R+ +   L  +    G  P 
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274

Query: 543 AVINQVMVRGYQENGDLKSAF 563
            V    M+ G  + G +++A 
Sbjct: 275 VVTYNTMIDGLCKCGRIENAL 295



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 36/236 (15%)

Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV-----------VF----------- 402
           +    ++D +     I+ ++GLY ++++  LV  V+           VF           
Sbjct: 41  IILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTH 100

Query: 403 -----TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF 457
                  L+    K   +++    ++  ++    P   + ++L++G FK G +  AL  F
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 458 LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
            E  D       S N VL     + LC  G+I  A ++F DM S    P+  +YT M+ G
Sbjct: 161 GEMKDSGIAVLRSHNIVL-----RGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDG 214

Query: 518 LLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
           L +++++   + L   M+   I PD V    ++ G  +   +K A+   +  +E+R
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY---DLFEEAR 267


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 215/439 (48%), Gaps = 5/439 (1%)

Query: 83  AIQACNALLNGLIKKGKFDSVWEFYEEMVLC---GLVADVVTYGVLIDCCCGQGDVMKAL 139
            +++ N++LN ++++G F+   EFY  +V      +  + +T+ ++I   C  G V KA+
Sbjct: 131 TVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAI 190

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
            +F E+  +   P    Y+ L+HGLC E ++ EA S+   M+  G  PNL  +N L+   
Sbjct: 191 EVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISAL 250

Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
           CK  D+ RA +    M      PN VT+  L+ GLC  G+L  A +    M      PN 
Sbjct: 251 CKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPND 310

Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
             +  LI+G    G   +   +   +E      + + Y+ LI GLC  G+   A  L ++
Sbjct: 311 VTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKE 370

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M  +G   N + Y++LIDG C+EG +++A    S+M  KG  PN  T+SSL+ G  +AG+
Sbjct: 371 MVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGD 430

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
              A+ ++ EM   + + + V ++ LI+GL KDG   E L ++K+ML   I   V   SS
Sbjct: 431 SHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSS 490

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           +IHG      +   L  F +      G    P+ + Y  ++ A C    I +A  + + M
Sbjct: 491 MIHGFCNANLVEQGLKLFNQML--CQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIM 548

Query: 500 RSDNLRPDNCTYTTMLRGL 518
                 PD  T    L+ L
Sbjct: 549 LDQGCDPDFITCDIFLKTL 567



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 226/470 (48%), Gaps = 13/470 (2%)

Query: 137 KALNLFDEMIDK-GIEPTVVIYTILIHGLCNE---NKMVEAESMFRSMRECGVVPNLYTY 192
           KA++LF  M  +   + TV  +  +++ +  E   N+ +E  +   + +   + PN  T+
Sbjct: 114 KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTF 173

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           N ++   C++  V++A+E + E+   N  P+  T+  LM GLCK   +  A +    M  
Sbjct: 174 NLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQV 233

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G FPN+  +N LI   CK G+L  A  L   M      P+  TYN L+ GLC  G+LE 
Sbjct: 234 EGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEK 293

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
           A  LL +M     + N VT+ +LI+G+  +G       V   +  +G   N   +SSLI 
Sbjct: 294 AVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLIS 353

Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
           G CK G  + AM L+ EMV K   P+ +V++ALIDGL ++G + E      EM      P
Sbjct: 354 GLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413

Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKA 492
           + FT SSL+ G F+ G    A+  + E  +      C  N V Y+ +I  LC DG+ ++A
Sbjct: 414 NSFTYSSLMRGYFEAGDSHKAILVWKEMANNN----CIHNEVCYSILINGLCKDGKFMEA 469

Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV--PDAVINQVMV 550
             ++  M S  ++ D   Y++M+ G   A  +   + L   M+  G V  PD +   +++
Sbjct: 470 LMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILL 529

Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLKPTVYKEQD 600
             +      KS FR  + L        + +  T   FL  L+  +   QD
Sbjct: 530 NAFCIQ---KSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQD 576



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 207/428 (48%), Gaps = 12/428 (2%)

Query: 55  FSTLIIAFSEMGHIEEALWVY------RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           F++++    + G    AL  Y      + + + P     N ++  + + G  D   E + 
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
           E+ L     D  TY  L+   C +  + +A++L DEM  +G  P +V + +LI  LC + 
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            +  A  +  +M   G VPN  TYNAL+ G C    + +A+   ++M+ +   PN VTFG
Sbjct: 255 DLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFG 314

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            L++G    G         V +   G   N +VY+ LI G CK G   +AM L  EM   
Sbjct: 315 TLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGK 374

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
              P+   Y+ LI GLC  G+L+ A G L +M  +G L N  TY+SL+ GY + GD  KA
Sbjct: 375 GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKA 434

Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
           + V  +M       N V +S LI+G CK G    A+ ++ +M+ + +  DVV ++++I G
Sbjct: 435 ILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHG 494

Query: 409 LSKDGNMKETLRLYKEML--EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
                 +++ L+L+ +ML     + P V T + L++       I  A++      D+   
Sbjct: 495 FCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQG-- 552

Query: 467 GYCSPNHV 474
             C P+ +
Sbjct: 553 --CDPDFI 558



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 223/482 (46%), Gaps = 58/482 (12%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   F+ +I A   +G +++A+ V+R+I +    P     + L++GL K+ + D      
Sbjct: 169 NALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLL 228

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           +EM + G   ++V + VLI   C +GD+ +A  L D M  KG  P  V Y  L+HGLC +
Sbjct: 229 DEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLK 288

Query: 168 NKMVEAESMFRSMRECGVVPN-----------------------------------LYTY 192
            K+ +A S+   M     VPN                                    Y Y
Sbjct: 289 GKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVY 348

Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
           ++L+ G CK    N+A+E + EM+     PN + +  L+DGLC+ G+L  A  F   M  
Sbjct: 349 SSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKN 408

Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
            G  PN F Y+ L+ G+ +AG+  +A+ +  EM       +   Y+ILI GLC  G+   
Sbjct: 409 KGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFME 468

Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG--VEPNVVTFSSL 370
           A  + ++M   GI  +VV Y+S+I G+C    +E+ L + +QM  +G  V+P+V+T++ L
Sbjct: 469 ALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNIL 528

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           ++  C   +I  A+ +   M+ +   PD +     +  L ++ N  +  R + + L  ++
Sbjct: 529 LNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRL 588

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
                T+ +           S  +   + K       +  P    +A ++Q +C    + 
Sbjct: 589 VKRQRTIGA-----------SKIIEVMMHK-------FLLPKASTWAMVVQQVCKPKNVR 630

Query: 491 KA 492
           KA
Sbjct: 631 KA 632



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 185/373 (49%), Gaps = 8/373 (2%)

Query: 195 LMDGYCKVADVNRALEFYHEML-HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-- 251
           +   Y K     +A++ +H M      +  V +F  +++ + + G    A  F+ H+   
Sbjct: 102 MFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVAS 161

Query: 252 -KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
               + PN   +N +I   C+ G + +A+ +  E+     +PD +TY+ L+ GLC   ++
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221

Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
           + A  LL +M  EG   N+V +N LI   CK+GD+ +A  +   M  KG  PN VT+++L
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281

Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
           + G C  G ++ A+ L  +MV    VP+ V F  LI+G    G   +  R+   +     
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341

Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
             + +  SSLI GL K G+ + A+  + E   K     C PN ++Y+A+I  LC +G++ 
Sbjct: 342 RGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG----CGPNTIVYSALIDGLCREGKLD 397

Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
           +A    S+M++    P++ TY++++RG   A      +++  +M     + + V   +++
Sbjct: 398 EARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILI 457

Query: 551 RGYQENGDLKSAF 563
            G  ++G    A 
Sbjct: 458 NGLCKDGKFMEAL 470



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 152/363 (41%), Gaps = 61/363 (16%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+      G +E+A+ +  ++   + +P       L+NG + +G+        
Sbjct: 274 NEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVL 333

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
             +   G   +   Y  LI   C +G   +A+ L+ EM+ KG  P  ++Y+ LI GLC E
Sbjct: 334 VSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCRE 393

Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
            K+ EA      M+  G +PN +TY++LM GY +  D ++A+  + EM ++N   N V +
Sbjct: 394 GKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCY 453

Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFG--------------------------------- 254
            +L++GLCK G+   A   +  M   G                                 
Sbjct: 454 SILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLC 513

Query: 255 ----VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL------ 304
               V P++  YN L++  C   ++F A+ + + M      PD  T +I +K L      
Sbjct: 514 QGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNP 573

Query: 305 ---------------CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
                              +  GA  +++ M  + +L    T+  ++   CK  ++ KA+
Sbjct: 574 PQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633

Query: 350 SVC 352
           S C
Sbjct: 634 SEC 636


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 265/547 (48%), Gaps = 26/547 (4%)

Query: 50  FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLP-----AIQACNALL-------- 91
           F PSV  ++T+I  +     I++AL V  +++   V+P     A Q   ++L        
Sbjct: 358 FVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDI 417

Query: 92  ---NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
              + LI +G       F + M    +  D V++  +ID  C +G++++A  ++D M+  
Sbjct: 418 VTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRY 477

Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
           G  P V  Y  L+ GLC    +V+A+     + +     +  T+NAL+ G CK   ++ A
Sbjct: 478 GHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEA 537

Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG 268
           L+   +M+ +N  P++ T+ +L+ G C+ G++  A      M   GV P+   Y CL++G
Sbjct: 538 LDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNG 597

Query: 269 HCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
               G +  A  +  E+  K  +  D   YN L+ G    G +   + ++  MY+  +  
Sbjct: 598 LINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYP 657

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           N  +YN L+ GY K G   K+L +   M  KG+ P+ VT+  LI G  + G ID A+   
Sbjct: 658 NSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 717

Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
            +MV++ + PD +VF  LI   S+   M   L+L+  M   +++PS  T S++I+GL + 
Sbjct: 718 EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRK 777

Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
             +  +     E           PNH  Y A++ A C  G+I +A +L  +M++  + P 
Sbjct: 778 NYLDQSHEVLREMLQVG----LQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPA 833

Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           +   ++++RGL +  ++ + +++ + M++ G+VP       ++    +   +  A     
Sbjct: 834 DVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKR 893

Query: 568 FLKESRI 574
            ++  R+
Sbjct: 894 LMESCRL 900



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 258/531 (48%), Gaps = 41/531 (7%)

Query: 75  YRKIE-VLPAIQAC--------NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
           +RK E +L  ++ C        N +L+  +KKG+F +     E+M    + AD+ TY ++
Sbjct: 239 FRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIM 298

Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
           ID  C      +A  L   M    + P    Y  LI+G   E K+  A  +F  M     
Sbjct: 299 IDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTF 358

Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEM--------------------LHHNLQPNVV 225
           VP++ TY  ++DGYC+   +++AL    EM                    L   + P++V
Sbjct: 359 VPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIV 418

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           T+  L++     G +  A +F  +M++  +  +   +NC+ID +C  GN+ EA ++   M
Sbjct: 419 TYSALINE----GMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAM 474

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
            ++  SP+V TY  L++GLC  G L  A+  +  +       +  T+N+L+ G CK G +
Sbjct: 475 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTL 534

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           ++AL +C +M +    P++ T++ L+ G C+ G I  A+ +   M+ K +VPD V +T L
Sbjct: 535 DEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCL 594

Query: 406 IDGLSKDGNMKETLRLYKEML-EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
           ++GL  +G +K    +++E++ +  +       +SL++G  K G I N +   +    ++
Sbjct: 595 LNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNI-NTIKRMMSDMYQS 653

Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           +     PN   Y  ++      GQ  K+  L+  M    +RPDN TY  ++ GL     +
Sbjct: 654 E---VYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 710

Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA---FRCSEFLKES 572
              +  L  M+  GI PD ++  +++  + E   + +A   F C ++L+ S
Sbjct: 711 DIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMS 761



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 254/496 (51%), Gaps = 10/496 (2%)

Query: 51  NPSVFSTLIIAFSEMGHIEEA-LWVYRKIEVLPAI--QACNALLNGLIKKGKFDSVWEFY 107
           N   +  L+    + GH+ +A  +++  +++  AI  +  NALL G+ K G  D   +  
Sbjct: 482 NVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLC 541

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
           E+MV    + D+ TY +L+   C +G ++ AL +   M+DKG+ P  V YT L++GL NE
Sbjct: 542 EKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINE 601

Query: 168 NKMVEAESMFRSM--RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
            ++  A  +F+ +  +E G+  +   YN+LM+GY K  ++N       +M    + PN  
Sbjct: 602 GQVKAASYVFQEIICKE-GLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSA 660

Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
           ++ +LM G  K G+   +   + +M + G+ P+   Y  LI G  + G +  A+    +M
Sbjct: 661 SYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 720

Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
               I PD   ++ILI       ++  A  L   M    +  +  TY+++I+G  ++  +
Sbjct: 721 VLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYL 780

Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
           +++  V  +M + G++PN   + +L++ +C+ G ID A  L  EM    +VP  V  +++
Sbjct: 781 DQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSI 840

Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
           I GL K G ++E + ++  M+ + + P+V T ++L+H L K  +I++AL+         +
Sbjct: 841 IRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHL----KRLME 896

Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
                 + V Y  +I  LC D +I  A  L+ +M+S  L P+  TY T+   +     M 
Sbjct: 897 SCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQ 956

Query: 526 DVMMLLADMIKMGIVP 541
           +   LL D+ + G++P
Sbjct: 957 NGEELLEDIEERGLIP 972



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 201/462 (43%), Gaps = 62/462 (13%)

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
           V++ +L+     E K+++A      M +CG   +    N ++    +  +      F  E
Sbjct: 154 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRE 213

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGN---------------------FFVHMAKF 253
            L HN   +V T  +L++ LC  GE R A +                     ++V   +F
Sbjct: 214 SLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRF 273

Query: 254 -------------GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
                         +  +I+ YN +ID  C+      A  L   M K ++ PD  TYN L
Sbjct: 274 KAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTL 333

Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT---- 356
           I G  G G++  A  +   M ++  + +V TY ++IDGYC+   ++KALSV S+M     
Sbjct: 334 INGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGV 393

Query: 357 ----------------EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
                           E G++P++VT+S+LI+     G I  A      M    +  D V
Sbjct: 394 MPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDSV 449

Query: 401 VFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEK 460
            F  +ID     GN+ E   +Y  M+    +P+V T  +L+ GL + G +  A  F    
Sbjct: 450 SFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCL 509

Query: 461 TDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLR 520
            D       + +   + A++  +C  G + +A  L   M  +N  PD  TYT +L G  R
Sbjct: 510 LDIPS----AIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCR 565

Query: 521 AKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
             ++L  +++L  M+  G+VPD V    ++ G    G +K+A
Sbjct: 566 KGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAA 607


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 219/440 (49%), Gaps = 44/440 (10%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNA-LNSLEIPKFNPSVFSTLI 59
           + ++L   ++   A+ LI+ V      SRK      +VF A L +    + +  VFS LI
Sbjct: 19  MIHLLCTHQMLSEAKSLIQVVV-----SRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73

Query: 60  IAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
            A+ E G + +A+  YR   + +       C  +L  L+K   F  VW FYEE++ CG  
Sbjct: 74  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 133

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
           A                                   ++  + IL+H  C +  +  A+S+
Sbjct: 134 A-----------------------------------SLYFFNILMHKFCKDGDIRVAQSV 158

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           F ++ + G+ P++ ++N LM+GY ++ D++        M    +QP+V T+ VL++GLCK
Sbjct: 159 FNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCK 218

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
             ++  A   F  M   G+ PN   +  LIDGHCK G +  AM +  +M    +SPD+ T
Sbjct: 219 ESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 278

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN LI GLC  G L+ A  L+ +M  +G+  + +TY +LIDG CKEGD+E A     +M 
Sbjct: 279 YNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMI 338

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
           ++ ++ + V +++LI G C+ G    A  +  EM+   L PD + +T +I+   K G++ 
Sbjct: 339 QENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVW 398

Query: 417 ETLRLYKEMLEAKITPSVFT 436
              +L KEM      PSV T
Sbjct: 399 TGSKLLKEMQRDGQMPSVVT 418



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 186/364 (51%), Gaps = 5/364 (1%)

Query: 148 KGIEPT-VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           KG + + + +++ LI        + +A   +R  RE        T   +++   K+    
Sbjct: 59  KGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFK 118

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
               FY E+L      ++  F +LM   CK G++R A + F  + K+G+ P++  +N L+
Sbjct: 119 LVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLM 178

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
           +G+ + G+L E   L + M    + PDV+TY++LI GLC   +++ A  L  +M  +G++
Sbjct: 179 NGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 238

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            N VT+ +LIDG+CK G ++ A+ +  QM  + + P+++T+++LI G C+ G++  A  L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDL 298

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
             EM +K L PD + +T LIDG  K+G+++      K M++  I       ++LI GL +
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQ 358

Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
            GR  +A     E           P+ + Y  II   C  G +   SKL  +M+ D   P
Sbjct: 359 EGRYLDAEKVLREMLSVG----LKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414

Query: 507 DNCT 510
              T
Sbjct: 415 SVVT 418



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 201/410 (49%), Gaps = 22/410 (5%)

Query: 153 TVVIYTILIHGLCNENKMVEAESMFR---SMRECGVVP---------------NLYTYNA 194
           T+  Y  +IH LC    + EA+S+ +   S +  G                  ++Y ++ 
Sbjct: 12  TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
           L+  Y +   +  A+E Y     H       T   +++ L K+   +    F+  + + G
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
              +++ +N L+   CK G++  A S+ + + K+ + P V ++N L+ G   +G L+   
Sbjct: 132 YPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
            L   M+  G+  +V TY+ LI+G CKE  M+ A  +  +M +KG+ PN VTF++LIDG 
Sbjct: 192 RLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
           CK G +D AM +Y +M+ +SL PD++ +  LI GL + G++K+   L  EM    + P  
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDK 311

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++LI G  K G +  A     E   +        + V Y A+I  LC +G+ L A K
Sbjct: 312 ITYTTLIDGXCKEGDLETA----FEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEK 367

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
           +  +M S  L+PD  TYT ++    +   +     LL +M + G +P  V
Sbjct: 368 VLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVV 417



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 4/210 (1%)

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
           ++ E G   ++  F+ L+   CK G+I  A  ++  +    L P VV F  L++G  + G
Sbjct: 126 EILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
           ++ E  RL   M  + + P V+T S LI+GL K  ++ +A   F E  DK       PN 
Sbjct: 186 DLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG----LVPNG 241

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V +  +I   C +G++  A +++  M S +L PD  TY T++ GL R   +     L+ +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDE 301

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
           M   G+ PD +    ++ G  + GDL++AF
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAF 331


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 250/510 (49%), Gaps = 26/510 (5%)

Query: 37  SVFNALNSLEIPKFNP--SVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNAL 90
           ++++A+   +     P  + F  LI A +  G   EA+  + ++E      P     NA+
Sbjct: 120 AMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAV 179

Query: 91  LNGLIKKGKFDSV-WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           L  L+  G    +    Y  MV  G + +  TY VL+D  C +G  + AL LFDEM+ +G
Sbjct: 180 LRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRG 239

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
           I P V  +TIL+  +CN  ++ EAE++  SM + G  P+  TYNA + G CK   V+ A+
Sbjct: 240 ITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI 299

Query: 210 EFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLID 267
           E    +         +  +  L+DGL   G        ++ + +   F P+I +Y  +I 
Sbjct: 300 ERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIR 359

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
           G  +AG + +A +   EM++   +PD F YN L+K LC  G L+GA  L+ +M +  ++ 
Sbjct: 360 GCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVL 419

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           +  T+  +I G CK+  +++A+ V   M E G  P V+T++ LIDG  +A  ++ A  L+
Sbjct: 420 DTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLF 479

Query: 388 TEMVI-------------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
            +M +              + V D      L+D + + G + +  +L + ++++ + P V
Sbjct: 480 YKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDV 539

Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
            T ++L++GL K   +  AL  F E   K   G+ S + + Y  +I +L    +   A  
Sbjct: 540 VTYNTLLNGLCKVRNLDGALRLFRELQVK---GF-SLDEITYGTLIDSLLRAHRYNDAMT 595

Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
           LF D+      P    Y +++R L R  ++
Sbjct: 596 LFQDILHIGGTPSLSIYNSIMRSLCRMNKL 625



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 242/562 (43%), Gaps = 26/562 (4%)

Query: 38  VFNALNS-LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIK 96
           +F+AL   L  P  +      +++A      + +A+   +   + P   A  AL+     
Sbjct: 90  LFSALTPRLRSPLLHSRAVVPILLATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHAS 149

Query: 97  KGKFDSVWEFYEEMV-LCGLVADVVTYGVLIDCCCGQGDVMK-ALNLFDEMIDKGIEPTV 154
            G+     + +  M    G       Y  ++      G V+  AL L++ M+  G  P  
Sbjct: 150 AGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNR 209

Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
             Y +L+ GLC     V+A  +F  M + G+ PN+ T+  L+   C    +  A    + 
Sbjct: 210 ATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNS 269

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP-NIFVYNCLIDGHCKAG 273
           M      P+ VT+   + GLCK G +  A      + + G F   +  Y+CLIDG   AG
Sbjct: 270 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAG 329

Query: 274 NLFEAMSLCSE-MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
              E      E +E+ + SPD+  Y I+I+G    G+++ A     +M ++    +   Y
Sbjct: 330 RYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCY 389

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
           N+L+   C  GD++ A S+ S+M +  V  +  T + +I G CK   +D AM ++  MV 
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE 449

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF--------------TVS 438
               P V+ +  LIDGL +   ++E   L+ +M E    PS+F              ++ 
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQ 508

Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            L+  + ++G++  A        D        P+ V Y  ++  LC    +  A +LF +
Sbjct: 509 KLVDSMCQSGQVLKAYKLLRGIMDSG----VVPDVVTYNTLLNGLCKVRNLDGALRLFRE 564

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
           ++      D  TY T++  LLRA R  D M L  D++ +G  P   I   ++R       
Sbjct: 565 LQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNK 624

Query: 559 LKSA--FRCSEFLKESRIGSSE 578
           L  A  F     LK+  + + +
Sbjct: 625 LSQAINFWFDHLLKKYNLSAQD 646



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 172/401 (42%), Gaps = 58/401 (14%)

Query: 45  LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGK 99
           LE   F+P +  ++ +I   +E G I++A   + +++     P     N LL  L   G 
Sbjct: 342 LEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGD 401

Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
            D       EM    +V D  T+ ++I   C +  V +A+ +FD M++ G  PTV+ Y +
Sbjct: 402 LDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNV 461

Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLY--------------TYNALMDGYCKVADV 205
           LI GL   +++ EA  +F  M E G  P+L+              +   L+D  C+   V
Sbjct: 462 LIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQV 520

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
            +A +    ++   + P+VVT+  L++GLCKV  L  A   F  +   G   +   Y  L
Sbjct: 521 LKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTL 580

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA-----EGLLQKM 320
           ID   +A    +AM+L  ++     +P +  YN +++ LC + +L  A     + LL+K 
Sbjct: 581 IDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKY 640

Query: 321 ---------------YKEGIL----------------ANVVTYNSLIDGYCKEGDMEKAL 349
                          ++EG L                 N   Y   + G  +   ++ AL
Sbjct: 641 NLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDAL 700

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG--LYT 388
            +   + E G++      + L    C   N+D+A+   LYT
Sbjct: 701 KIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYT 741


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 236/496 (47%), Gaps = 39/496 (7%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY----GVLI-DCC--------------- 129
           LL+G ++ GKFDSV E ++EMV+ G     V Y    GVL+ +CC               
Sbjct: 164 LLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKG 223

Query: 130 ---------------CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
                          C    +     L  +M   G  P +    I I+ LC +N++ +A 
Sbjct: 224 FCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDAL 283

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            M   MR  G  P++ TY  ++ G C       A+  + EM+  +L+P+V + G L+ GL
Sbjct: 284 QMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGL 343

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           CK  ++  A      M    +  ++ +YN LI G  +AG++ +A  + S M      PD+
Sbjct: 344 CKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDI 403

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
            TYNIL+   C +G +E AE L++KM   G+  +  +YN L+ G CK   ++KA +  S 
Sbjct: 404 VTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSD 463

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
             E G   + V+ + LID  CK   + +A+ L+ EM  K +  D V +  LI+GL   G 
Sbjct: 464 HMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGY 523

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
                 L+++ML A+I P+V   + ++H L K G    A   F     K      SP+ V
Sbjct: 524 YNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKE----VSPDTV 579

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
            +  +I  L    + ++A  LF DMR+  + PD  T+  ++ GLL   +      +   M
Sbjct: 580 TFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYM 639

Query: 535 IKMGIVPDAVINQVMV 550
           ++ GI+ D  +++ ++
Sbjct: 640 MENGIILDREVSERLI 655



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 193/403 (47%), Gaps = 3/403 (0%)

Query: 50  FNPSVFSTLIIAFSEMGHIE---EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEF 106
             P  +S  I A  +   IE   E L    K+   P I ACN  +  L K+ +     + 
Sbjct: 226 LTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQM 285

Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
            E+M   G   DVVTY  ++   C      +A+ L++EM+ + ++P V     LI GLC 
Sbjct: 286 VEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCK 345

Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
            NK+ EA  +   M    +  ++  YNAL+ G+ +   +++A +    M  +  +P++VT
Sbjct: 346 NNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVT 405

Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
           + +L++  C +G +  A      M   GV P+ + YN L+ G CK   L +A +  S+  
Sbjct: 406 YNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM 465

Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
           +     D  + NILI   C   +++ A  L ++M  +G+ A+ VTY +LI+G    G   
Sbjct: 466 EVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYN 525

Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
            A  +  QM    ++PNV  ++ ++   CK G+   A  +++ M+ K + PD V F  LI
Sbjct: 526 LAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585

Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
             L K     E L L+K+M    + P   T   LI GL   G+
Sbjct: 586 YWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGK 628



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 240/580 (41%), Gaps = 47/580 (8%)

Query: 34  VCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ----ACNA 89
           +C      L  L++ + +P V + ++   S+    E A+  Y   E  P       A   
Sbjct: 73  MCSEPLVELERLDV-ELDPIVVNLVVRGLSDS---ETAVRFYWWAESRPGFDHSQFAIAY 128

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI--- 146
           L++ L   G F  + EF   +   G+      Y +L+      G     +  FDEM+   
Sbjct: 129 LVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSG 188

Query: 147 --------------------------------DKGIEPTVVIYTILIHGLCNENKMVEAE 174
                                            KG   T   Y+  I  LC  N++   +
Sbjct: 189 CREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQ 248

Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
            +   M + G  P+++  N  +   CK   +  AL+   +M      P+VVT+  ++ GL
Sbjct: 249 ELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGL 308

Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
           C   +   A   +  M K  + P++F    LI G CK   + EA  L S M   +I   V
Sbjct: 309 CDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSV 368

Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
             YN LI G    G ++ A  ++  M   G   ++VTYN L++ YC  G MEKA  +  +
Sbjct: 369 CIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRK 428

Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
           M   GV P+  +++ L+ G CK   +D A    ++ +      D V    LID   K   
Sbjct: 429 METSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKK 488

Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
           +K  L L+KEM    +     T  +LI+GLF  G  + A   F    ++       PN  
Sbjct: 489 VKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELF----EQMLNAQIDPNVN 544

Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
           LY  ++  LC  G   +A  +FS M    + PD  T+ T++  L +  R ++ + L  DM
Sbjct: 545 LYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDM 604

Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
              G+ PD +  + ++ G  + G    A+   E++ E+ I
Sbjct: 605 RTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGI 644



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 169/359 (47%), Gaps = 3/359 (0%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            + T++    +     EA+ ++    K ++ P + +C AL+ GL K  K D  +E    M
Sbjct: 300 TYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRM 359

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   +   V  Y  LI      G + KA  +   M   G EP +V Y IL++  C    M
Sbjct: 360 LTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMM 419

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            +AE + R M   GV P+ Y+YN L+ G CK   +++A  F  + +      + V+  +L
Sbjct: 420 EKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNIL 479

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +D  CK  ++++A   F  M   G+  +   Y  LI+G    G    A  L  +M   +I
Sbjct: 480 IDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQI 539

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            P+V  YNI++  LC VG  + A+ +   M ++ +  + VT+N+LI    K     +AL+
Sbjct: 540 DPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALN 599

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +   M  +GVEP+ +TF  LI G    G    A  ++  M+   ++ D  V   LI  L
Sbjct: 600 LFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVL 658



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 20/302 (6%)

Query: 272 AGNLFEAM--SLCSE----MEKFEISPDVFTYNILIKGL----CGVGQLEGAEGLLQKMY 321
           +G + +A+  S+CSE    +E+ ++  D    N++++GL      V     AE       
Sbjct: 62  SGIILQALERSMCSEPLVELERLDVELDPIVVNLVVRGLSDSETAVRFYWWAES------ 115

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
           + G   +      L+     +G+         ++  +GV  +   +  L+ G  +AG  D
Sbjct: 116 RPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFD 175

Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
           + +  + EMV+       V +   I  L K+       + Y   L      + FT S  I
Sbjct: 176 SVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWI 235

Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
             L ++ RI       ++     D   CSP+       I  LC   ++  A ++   MR+
Sbjct: 236 SALCQSNRIELVQELLVD----MDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRT 291

Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
               PD  TY T++ GL   K+  + + L  +M+K  + PD      ++ G  +N  +  
Sbjct: 292 KGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDE 351

Query: 562 AF 563
           AF
Sbjct: 352 AF 353


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 214/445 (48%), Gaps = 9/445 (2%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N L+ GL  +GK D      +EM    L+ DVVTY  LID C       +   L +EM  
Sbjct: 141 NTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKS 200

Query: 148 KG-IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
           +G +EP  V + I++     E K+ EA      M E GV P+ +TYN +++G+CK   + 
Sbjct: 201 RGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLG 260

Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
            A     EM    L+P++ T   ++  LC   +   A    V   K G   +   Y  LI
Sbjct: 261 EAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLI 320

Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
            G+ K     +A+ L  EM+K  I P V +YN LI+GLC  G+ + A   L ++ ++G++
Sbjct: 321 MGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLV 380

Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
            + V+ N +I GYC EG ++KA    ++M     +P++ T + L+ G C+   ++ A  L
Sbjct: 381 PDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKL 440

Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
           +   + K    DVV +  +I  L K+G + E   L  +M   K  P  +T ++++  L  
Sbjct: 441 FNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTH 500

Query: 447 NGRISNALNFFLE--------KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
            GR   A  F  +        KT  T     + + ++Y+  I  LC  G+  +A KLF +
Sbjct: 501 AGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQE 560

Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKR 523
                +  +  TY  ++ G L+ ++
Sbjct: 561 SEQKGVSLNKYTYIKLMDGFLKRRK 585



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 195/386 (50%), Gaps = 5/386 (1%)

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           V  Y  L+ GLC+E K+ EA  +   M    ++P++ TYN L+DG  K            
Sbjct: 137 VWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLE 196

Query: 214 EMLHH-NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           EM     ++PN VT  +++    K G++  A +  V M + GV P+ F YN +I+G CKA
Sbjct: 197 EMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKA 256

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G L EA  +  EM +  + PD+ T N ++  LC   + E A  L  K  K G + + VTY
Sbjct: 257 GKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTY 316

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            +LI GY K    +KAL +  +M ++G+ P+VV+++ LI G C +G  D A+    E++ 
Sbjct: 317 GTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLE 376

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
           K LVPD V    +I G   +G + +  + + +M+     P +FT + L+ GL +   +  
Sbjct: 377 KGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEK 436

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
           A   F     K +    S + V Y  +I  LC +G++ +A  L +DM      PD  TY 
Sbjct: 437 AFKLFNSWISKQN----SVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYN 492

Query: 513 TMLRGLLRAKRMLDVMMLLADMIKMG 538
            ++R L  A R  +    ++ + + G
Sbjct: 493 AIVRALTHAGRTEEAEKFMSKLSETG 518



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 11/345 (3%)

Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
           +V T+  L+ GLC  G++  A      M    + P++  YN LIDG  K     E   L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 283 SEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
            EM+ +  + P+  T+NI++K     G++  A   + KM + G+  +  TYN++I+G+CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
            G + +A  +  +M  KG++P++ T ++++   C     + A  L  +   +  + D V 
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFL 458
           +  LI G  K     + L+L++EM +  I PSV + + LI GL  +G+   A   LN  L
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
           EK          P+ V    II   C++G + KA +  + M  ++ +PD  T   +LRGL
Sbjct: 376 EKG-------LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGL 428

Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
            R   +     L    I      D V    M+    + G L  AF
Sbjct: 429 CRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAF 473



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 160/379 (42%), Gaps = 47/379 (12%)

Query: 80  VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
           V P     N ++    K+GK +   +   +MV  G+  D  TY  +I+  C  G + +A 
Sbjct: 204 VEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAF 263

Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE------------------------- 174
            + DEM  KG++P +     ++H LC E K  EA                          
Sbjct: 264 RMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGY 323

Query: 175 ----------SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
                      ++  M++ G+VP++ +YN L+ G C     ++A++  +E+L   L P+ 
Sbjct: 324 FKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDE 383

Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
           V+  +++ G C  G +  A  F   M      P+IF  N L+ G C+   L +A  L + 
Sbjct: 384 VSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNS 443

Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
               + S DV TYN +I  LC  G+L+ A  L+  M  +    +  TYN+++      G 
Sbjct: 444 WISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGR 503

Query: 345 MEKALSVCSQMTEKGVEPNV------------VTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            E+A    S+++E G                 + +S  I   C  G    AM L+ E   
Sbjct: 504 TEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQ 563

Query: 393 KSLVPDVVVFTALIDGLSK 411
           K +  +   +  L+DG  K
Sbjct: 564 KGVSLNKYTYIKLMDGFLK 582



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 5/275 (1%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S DV+TYN L+KGLC  G+++ A  +  +M    ++ +VVTYN+LIDG  K     +   
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 351 VCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
           +  +M  + GVEPN VT + ++    K G I+ A     +MV   + PD   +  +I+G 
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253

Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
            K G + E  R+  EM    + P + T+++++H L    +   A    ++   +   GY 
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKR---GYI 310

Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
             + V Y  +I       Q  KA KL+ +M+   + P   +Y  ++RGL  + +    + 
Sbjct: 311 L-DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVD 369

Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
            L ++++ G+VPD V   +++ GY   G +  AF+
Sbjct: 370 KLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQ 404


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 229/480 (47%), Gaps = 15/480 (3%)

Query: 88  NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
           N  L GL+++G+ D        +   G    V+   +LI   C  G V  A  + + +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
            G   T++ Y  +++G C    +  A  M  S+      P+ +TYN L+   C    V  
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLD 178

Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
           AL  + +MLH    P+VVT+ +L+D  CK    + A      M   G  P+I  YN LI+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
             C  G++ EA+ + + +  +   PD  TY  ++K LC   + E A+ LL KM+      
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
           + VT+N++I   C++G + +A  V +QM+E G  P+++T+SS++DG CK   +D A+ L 
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 388 ----TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
                EMV K+ +PD V F  +I  L + G     +++  EM E    P + T + ++ G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 444 -LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            L K+ +   AL+           G C P+   Y ++   L  + ++ +A  +F  +++ 
Sbjct: 419 FLCKSCKTEEALDLL---NLMVSNGLC-PDTTTYKSLAFGLSREDEMERAIGMFRRVQAM 474

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            L PD   Y  +L GL +  R    +   A M+  G +PD     ++V G    G L+ A
Sbjct: 475 GLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 225/456 (49%), Gaps = 14/456 (3%)

Query: 51  NPSVF--STLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
           +P+V   + LI      G + +A  V   +     I   N ++NG  + G  D+     +
Sbjct: 93  DPAVIPCNILIKKLCADGRVADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMID 152

Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
            +       D  TY  LI   C +G V+ AL +FD+M+ +G  P+VV Y+IL+   C E+
Sbjct: 153 SV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKES 209

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
              +A  +   MR  G  P++ TYN L++  C   DV  AL+  + +  +  +P+ VT+ 
Sbjct: 210 GYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYT 269

Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
            ++  LC       A      M      P+   +N +I   C+ G +  A  + ++M + 
Sbjct: 270 PVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH 329

Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV----VTYNSLIDGYCKEGD 344
             +PD+ TY+ ++ GLC   +++ A  LL+++  E +  N     VT+N++I   C++G 
Sbjct: 330 GCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL 389

Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDG-QCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
            ++A+ V  +M+E G  P++ T++ ++DG  CK+   + A+ L   MV   L PD   + 
Sbjct: 390 FDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYK 449

Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
           +L  GLS++  M+  + +++ +    ++P     ++++ GL K  R   A++FF      
Sbjct: 450 SLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSN 509

Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
                C P+   Y  +++ + Y+G + +A +L  ++
Sbjct: 510 G----CMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 160/345 (46%), Gaps = 14/345 (4%)

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           + GL + GEL  A      ++  G  P +   N LI   C  G + +A  +   +E    
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERV---VEALGP 124

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
           S  + TYN ++ G C  G ++ A  ++  +       +  TYN LI   C  G +  AL+
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           V   M  +G  P+VVT+S L+D  CK      A+ L  EM  K   PD+V +  LI+ + 
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
             G++ E L++   +      P   T + ++  L  + R   A +  L K    D   C+
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEA-DKLLTKMFSND---CA 297

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+ V + A+I +LC  G + +A+K+ + M      PD  TY++++ GL + +R+ + + L
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKL 357

Query: 531 L----ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
           L    A+M+    +PD V    ++    + G    A +  + + E
Sbjct: 358 LKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 80/379 (21%)

Query: 50  FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
           F P  F+   LI A    G + +AL V+  +      P++   + LL+   K+  +    
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
              +EM   G   D+VTY VLI+  C QGDV +AL + + +   G +P  V YT ++  L
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275

Query: 165 CNENKMVEAESMFR-----------------------------------SMRECGVVPNL 189
           C+  +  EA+ +                                      M E G  P++
Sbjct: 276 CSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDI 335

Query: 190 YTYNALMDGYCKVADVNRAL----EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
            TY+++MDG CK   V+ A+    E   EM+  N  P+ VTF  ++  LC+ G    A  
Sbjct: 336 ITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIK 395

Query: 246 FFVHMAKFGVFPNIFVYNCLIDGH-CKAGNLFEAMSLCS--------------------- 283
               M++ G  P+I  YNC++DG  CK+    EA+ L +                     
Sbjct: 396 VVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL 455

Query: 284 ----EMEK----------FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
               EME+            +SPD   YN ++ GLC   + + A      M   G + + 
Sbjct: 456 SREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDE 515

Query: 330 VTYNSLIDGYCKEGDMEKA 348
            TY  L++G   EG +E+A
Sbjct: 516 STYIILVEGIAYEGFLEEA 534


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 5/427 (1%)

Query: 81  LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
           LP+I   + LL  + K  K+++V   +  + + G+  D+ ++  LIDC C    +  AL+
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
              +M+  G EP++V +  L++G C+ N+  EA S+   +   G  PN+  YN ++D  C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
           +   VN AL+    M    ++P+VVT+  L+  L   G    +      M + G+ P++ 
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            ++ LID + K G L EA    +EM +  ++P++ TYN LI GLC  G L+ A+ +L  +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
             +G   N VTYN+LI+GYCK   ++  + +   M+  GV+ +  T+++L  G C+AG  
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
            AA  +   MV   + PD+  F  L+DGL   G + + L   +++ ++K    + T + +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435

Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM- 499
           I GL K  ++ +A   F     K      SP+ + Y  ++  L       +A +L+  M 
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKG----VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491

Query: 500 RSDNLRP 506
           + D L P
Sbjct: 492 KEDGLMP 498



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 197/392 (50%), Gaps = 4/392 (1%)

Query: 37  SVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNG 93
           S+F  L  L I   +   F+TLI  F     +  AL    K+  L   P+I    +L+NG
Sbjct: 100 SLFRHLEMLGISH-DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNG 158

Query: 94  LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
                +F       +++V  G   +VV Y  +ID  C +G V  AL++   M   GI P 
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218

Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           VV Y  LI  L +      +  +   M   G+ P++ T++AL+D Y K   +  A + Y+
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN 278

Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
           EM+  ++ PN+VT+  L++GLC  G L  A      +   G FPN   YN LI+G+CKA 
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338

Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
            + + M +   M +  +  D FTYN L +G C  G+   AE +L +M   G+  ++ T+N
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398

Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
            L+DG C  G + KAL     + +      ++T++ +I G CKA  ++ A  L+  + +K
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458

Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
            + PDV+ +  ++ GL +    +E   LY++M
Sbjct: 459 GVSPDVITYITMMIGLRRKRLWREAHELYRKM 490



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 12/429 (2%)

Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
           AL LF +M +    P++V ++ L+  +   NK     S+FR +   G+  +LY++  L+D
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
            +C+ A ++ AL    +M+    +P++VTFG L++G C V     A +    +   G  P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
           N+ +YN +ID  C+ G +  A+ +   M+K  I PDV TYN LI  L   G    +  +L
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
             M + GI  +V+T+++LID Y KEG + +A    ++M ++ V PN+VT++SLI+G C  
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
           G +D A  +   +V K   P+ V +  LI+G  K   + + +++   M    +    FT 
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362

Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAAIIQALCYDGQILKAS 493
           ++L  G  + G+ S A        +K  G   S    P+   +  ++  LC  G+I KA 
Sbjct: 363 NTLYQGYCQAGKFSAA--------EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414

Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
               D++         TY  +++GL +A ++ D   L   +   G+ PD +    M+ G 
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474

Query: 554 QENGDLKSA 562
           +     + A
Sbjct: 475 RRKRLWREA 483



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 187/371 (50%), Gaps = 10/371 (2%)

Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
           N AL  + +M   +  P++V F  L+  + K+ +  A  + F H+   G+  +++ +  L
Sbjct: 61  NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120

Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
           ID  C+   L  A+S   +M K    P + T+  L+ G C V +   A  L+ ++   G 
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180

Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
             NVV YN++ID  C++G +  AL V   M + G+ P+VVT++SLI     +G    +  
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240

Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
           + ++M+   + PDV+ F+ALID   K+G + E  + Y EM++  + P++ T +SLI+GL 
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300

Query: 446 KNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
            +G +  A   LN  + K      G+  PN V Y  +I   C   ++    K+   M  D
Sbjct: 301 IHGLLDEAKKVLNVLVSK------GF-FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353

Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
            +  D  TY T+ +G  +A +      +L  M+  G+ PD     +++ G  ++G +  A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413

Query: 563 FRCSEFLKESR 573
               E L++S+
Sbjct: 414 LVRLEDLQKSK 424


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 166/589 (28%), Positives = 262/589 (44%), Gaps = 38/589 (6%)

Query: 1   IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVF----------NALNSL-EIPK 49
           +   L NA+L  ++  L       L  S K   +C+ +           +AL+ L E+P+
Sbjct: 147 LLQCLENARLVNDSLLLFN----QLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQ 202

Query: 50  FNPSVFSTLIIAFSEM---------GHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKF 100
            N     T  I F E+         G +   +    +  V P       L+  L    K 
Sbjct: 203 ANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKN 262

Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN-LFDEMIDKGIEPTVVIYTI 159
              WE    ++  G   D  +   L+    G+G  +K +N L  EM  + I P+VV + I
Sbjct: 263 GVAWEVLHCVMRLGGAVDAASCNALL-TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGI 321

Query: 160 LIHGLCNENKMVEAESMFRSMR------ECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
           L++ LC   ++ EA  +F  +R        GV P++  +N L+DG CKV      L    
Sbjct: 322 LVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLE 381

Query: 214 EMLHHNL-QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
           EM   N+ +PN VT+  L+DG  K G    A   F  M + GV PN+   N L+DG CK 
Sbjct: 382 EMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKH 441

Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTY 332
           G +  A+   +EM+   +  +  TY  LI   CGV  +  A    ++M   G   + V Y
Sbjct: 442 GRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVY 501

Query: 333 NSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI 392
            SLI G C  G M  A  V S++   G   +   ++ LI G CK   ++    L TEM  
Sbjct: 502 YSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEE 561

Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
             + PD + +  LI  L K G+     ++ ++M++  + PSV T  ++IH       +  
Sbjct: 562 TGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDE 621

Query: 453 ALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYT 512
            +  F E    +      PN V+Y  +I ALC +  + +A  L  DM+   +RP+  TY 
Sbjct: 622 GMKIFGEMCSTSK---VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYN 678

Query: 513 TMLRGLLRAKRMLDVMMLLAD-MIKMGIVPDAVINQVMVRGYQENGDLK 560
            +L+G +R K+ML     L D M++    PD +  +V+       G+++
Sbjct: 679 AILKG-VRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 213/436 (48%), Gaps = 12/436 (2%)

Query: 64  EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV------LCGLVA 117
           ++  + E L    K ++ P++     L+N L K  + D   + ++ +         G+  
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355

Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGI-EPTVVIYTILIHGLCNENKMVEAESM 176
           DVV +  LID  C  G     L+L +EM    I  P  V Y  LI G         A  +
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
           FR M E GV PN+ T N L+DG CK   V+RA+EF++EM    L+ N  T+  L+   C 
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCG 475

Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
           V  +  A   F  M   G  P+  VY  LI G C AG + +A  + S+++    S D   
Sbjct: 476 VNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC 535

Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
           YN+LI G C   +LE    LL +M + G+  + +TYN+LI    K GD   A  V  +M 
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI 595

Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV-PDVVVFTALIDGLSKDGNM 415
           ++G+ P+VVT+ ++I   C   N+D  M ++ EM   S V P+ V++  LID L ++ ++
Sbjct: 596 KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDV 655

Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
              + L ++M   ++ P+  T ++++ G+    R    L+   E  D+     C P+++ 
Sbjct: 656 DRAISLMEDMKVKRVRPNTTTYNAILKGV----RDKKMLHKAFELMDRMVEEACRPDYIT 711

Query: 476 YAAIIQALCYDGQILK 491
              + + L   G+I K
Sbjct: 712 MEVLTEWLSAVGEIEK 727



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 154/312 (49%), Gaps = 11/312 (3%)

Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
           N L+    +  ++     L +EMEK +I P V T+ IL+  LC   +++ A  +  ++  
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRG 344

Query: 323 EG------ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV-EPNVVTFSSLIDGQC 375
           +G      +  +VV +N+LIDG CK G  E  LS+  +M    +  PN VT++ LIDG  
Sbjct: 345 KGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFF 404

Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
           KAGN D A  L+ +M  + + P+V+    L+DGL K G +   +  + EM    +  +  
Sbjct: 405 KAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAA 464

Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
           T ++LI        I+ A+  F E         CSP+ V+Y ++I  LC  G++  AS +
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSG----CSPDAVVYYSLISGLCIAGRMNDASVV 520

Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
            S ++      D   Y  ++ G  + K++  V  LL +M + G+ PD +    ++    +
Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580

Query: 556 NGDLKSAFRCSE 567
            GD  +A +  E
Sbjct: 581 TGDFATASKVME 592



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 206/462 (44%), Gaps = 33/462 (7%)

Query: 148 KGIEPTVVIY----TILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVA 203
           K   PT+ +     ++L+  L N   + ++  +F  +      P L   + L+    K  
Sbjct: 131 KSTHPTLPLTPKSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQLC--HGLLRVLLKSG 188

Query: 204 DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFF---------VHMAKFG 254
               AL    EM   N        G  + G    GEL  +G  F           + + G
Sbjct: 189 RAGDALHVLDEMPQAN-------SGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERG 241

Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
           VFP+ F    L+   C       A  +   + +   + D  + N L+  L     ++   
Sbjct: 242 VFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMN 301

Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG------VEPNVVTFS 368
            LL +M K  I  +VVT+  L++  CK   +++AL V  ++  KG      VEP+VV F+
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361

Query: 369 SLIDGQCKAGNIDAAMGLYTEMVIKSL-VPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
           +LIDG CK G  +  + L  EM + ++  P+ V +  LIDG  K GN      L+++M E
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
             + P+V T+++L+ GL K+GR+  A+ FF E   K   G    N   Y A+I A C   
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG----NAATYTALISAFCGVN 477

Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
            I +A + F +M S    PD   Y +++ GL  A RM D  ++++ +   G   D     
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYN 537

Query: 548 VMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
           V++ G+ +   L+  +     ++E+ +       +T  S+LG
Sbjct: 538 VLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 4/198 (2%)

Query: 53  SVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEE 109
           S ++ LI  F +   +E    +  ++E   V P     N L++ L K G F +  +  E+
Sbjct: 534 SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEK 593

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG-IEPTVVIYTILIHGLCNEN 168
           M+  GL   VVTYG +I   C + +V + + +F EM     + P  VIY ILI  LC  N
Sbjct: 594 MIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNN 653

Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
            +  A S+   M+   V PN  TYNA++ G      +++A E    M+    +P+ +T  
Sbjct: 654 DVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITME 713

Query: 229 VLMDGLCKVGELRAAGNF 246
           VL + L  VGE+    +F
Sbjct: 714 VLTEWLSAVGEIEKLKHF 731


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 269/585 (45%), Gaps = 59/585 (10%)

Query: 2   FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLI 59
           F  +AN+ L+K+     + +   L    +   V Y     L  +++  F+ S  +F ++I
Sbjct: 62  FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY----LLQQMKLQGFHCSEDLFISVI 117

Query: 60  IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
             + ++G  E A+ ++ +I+     P+++  N +L+ L+ + +   ++  Y +M   G  
Sbjct: 118 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 177

Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
            +V TY VL+   C    V  A  L  EM +KG  P  V YT +I  +C    + E   +
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL 237

Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
                     P +  YNAL++G CK  D    +E   EM+   + PNV+++  L++ L  
Sbjct: 238 AERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSN 292

Query: 237 VGELRAAGNFFVHMAK------------------------------------FGVFPNIF 260
            G++  A +    M K                                    FG+ PN+ 
Sbjct: 293 SGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVV 352

Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
            YN L+ G C  GN+ +A+S+   ME+   SP++ TY  LI G    G LEGA  +  KM
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412

Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
              G   NVV Y S+++  C+    ++A S+   M+++   P+V TF++ I G C AG +
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472

Query: 381 DAAMGLYTEMVIK-SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           D A  ++ +M  +    P++V +  L+DGL+K   ++E   L +E+    +  S  T ++
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           L+HG    G    AL        K      SP+ +    II A C  G+  +A ++  D+
Sbjct: 533 LLHGSCNAGLPGIALQL----VGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML-DL 587

Query: 500 RS---DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
            S      RPD  +YT ++ GL R+    D ++L   MI   I+P
Sbjct: 588 VSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 238/511 (46%), Gaps = 44/511 (8%)

Query: 90  LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
           ++  L   G+ DSV    ++M L G       +  +I      G   +A+ +F  + + G
Sbjct: 81  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 140

Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
            +P+V IY  ++  L  EN++     ++R M+  G  PN++TYN L+   CK   V+ A 
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
           +   EM +    PN V++  ++  +C+VG ++               P + VYN LI+G 
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGL 255

Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG----- 324
           CK  +    + L SEM +  ISP+V +Y+ LI  L   GQ+E A  LL +M K G     
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 325 -------------------------------ILANVVTYNSLIDGYCKEGDMEKALSVCS 353
                                          +  NVV YN+L+ G+C  G+++KA+SV  
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
            M E G  PN+ T+ SLI+G  K G+++ A+ ++ +M+     P+VVV+T++++ L +  
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
             KE   L + M +    PSV T ++ I GL   GR+  A   F +   +     C PN 
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYR---CPPNI 492

Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
           V Y  ++  L    +I +A  L  ++    +     TY T+L G   A      + L+  
Sbjct: 493 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGK 552

Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
           M+  G  PD +   +++  Y + G  + A +
Sbjct: 553 MMVNGKSPDEITMNMIILAYCKQGKAERAVQ 583



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 121/265 (45%), Gaps = 11/265 (4%)

Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
           F+ +P   T+ ++I+ L   GQ++  + LLQ+M  +G   +   + S+I  Y + G  E+
Sbjct: 71  FKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER 128

Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
           A+ +  ++ E G +P+V  ++ ++D       I     +Y +M      P+V  +  L+ 
Sbjct: 129 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 188

Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
            L K+  +    +L  EM      P+  + +++I  + + G +         K  +    
Sbjct: 189 ALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMV---------KEGRQLAE 239

Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
              P   +Y A+I  LC +       +L S+M    + P+  +Y+T++  L  + ++   
Sbjct: 240 RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELA 299

Query: 528 MMLLADMIKMGIVPDAVINQVMVRG 552
             LLA M+K G  P+      +V+G
Sbjct: 300 FSLLAQMLKRGCHPNIHTLSSLVKG 324



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 5/146 (3%)

Query: 51  NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
           N   ++ L+   ++   IEEA  + R+I    V  +    N LL+G    G      +  
Sbjct: 491 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLV 550

Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI--DKGIEPTVVIYTILIHGLC 165
            +M++ G   D +T  ++I   C QG   +A+ + D +    +   P V+ YT +I GLC
Sbjct: 551 GKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLC 610

Query: 166 NENKMVEAESMFRSMRECGVVPNLYT 191
             N   +   +F  M    ++P L +
Sbjct: 611 RSNCREDGVILFERMISERIIPILRS 636



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 4/168 (2%)

Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
           + F  +I  L+ DG +     L ++M       S     S+I    + G    A+  F  
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
             +      C P+  +Y  ++  L  + +I     ++ DM+ D   P+  TY  +L+ L 
Sbjct: 136 IKEFG----CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 191

Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
           +  ++     LL +M   G  P+AV    ++    E G +K   + +E
Sbjct: 192 KNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAE 239


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 182/325 (56%)

Query: 110 MVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENK 169
           MV  G   DV TY  +I+  C  G+ + A  LF +M + G +P VV Y+ +I  LC + +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 170 MVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGV 229
           + EA  +F  M+  G+ PN++TYN+L+ G C  +    A    +EM+  N+ PN+VTF +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
           L++  CK G +  A      M + GV PN+  Y+ L++G+     +FEA  L   M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
             PDVF+YNILI G C   ++  A+ L  +M  +G+  ++V+YN+LIDG C+ G + +A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
            +   M   G  P++ T+S L+DG CK G +  A  L+  M    L P++V++  LID +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 410 SKDGNMKETLRLYKEMLEAKITPSV 434
            K  N+KE  +L+ E+    + P++
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 179/318 (56%)

Query: 82  PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
           P +     ++NGL K G+  +    +++M   G   DVVTY  +ID  C    V +AL++
Sbjct: 8   PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67

Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
           F  M  KGI P +  Y  LI GLCN ++  EA +M   M    ++PN+ T++ L++ +CK
Sbjct: 68  FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127

Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
             +V  A      M    ++PNVVT+  LM+G     E+  A   F  M   G  P++F 
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187

Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
           YN LI+G+CKA  + EA  L +EM    ++PD+ +YN LI GLC +G+L  A  L + M 
Sbjct: 188 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 247

Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
             G L ++ TY+ L+DG+CK+G + KA  +   M    ++PN+V ++ LID  CK+ N+ 
Sbjct: 248 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 307

Query: 382 AAMGLYTEMVIKSLVPDV 399
            A  L++E+ ++ L P++
Sbjct: 308 EARKLFSELFVQGLQPNM 325



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 186/328 (56%), Gaps = 4/328 (1%)

Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
           M+    QP+V T+  +++GLCK+GE  AA   F  M + G  P++  Y+ +ID  CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
           + EA+ + S M+   ISP++FTYN LI+GLC   +   A  +L +M    I+ N+VT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
           LI+ +CKEG++ +A  V   MTE GVEPNVVT+SSL++G      +  A  L+  M+ K 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
             PDV  +  LI+G  K   + E  +L+ EM+   +TP + + ++LI GL + GR+  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
           + F  K   T+G    P+   Y+ ++   C  G + KA +LF  M+S  L+P+   Y  +
Sbjct: 241 DLF--KNMLTNGNL--PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPD 542
           +  + +++ + +   L +++   G+ P+
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 169/315 (53%)

Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
           M+ +G +P V  YT +I+GLC   + V A  +F+ M E G  P++ TY+ ++D  CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
           VN AL+ +  M    + PN+ T+  L+ GLC     R A      M    + PNI  ++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
           LI+  CK GN+FEA  +   M +  + P+V TY+ L+ G     ++  A  L   M  +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
              +V +YN LI+GYCK   + +A  + ++M  +G+ P++V++++LIDG C+ G +  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
            L+  M+    +PD+  ++ L+DG  K G + +  RL++ M    + P++   + LI  +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 445 FKNGRISNALNFFLE 459
            K+  +  A   F E
Sbjct: 301 CKSRNLKEARKLFSE 315



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 159/279 (56%), Gaps = 3/279 (1%)

Query: 54  VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
            +ST+I +  +   + EAL ++  ++   + P I   N+L+ GL    ++        EM
Sbjct: 47  TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 106

Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
           +   ++ ++VT+ +LI+  C +G+V +A  +   M + G+EP VV Y+ L++G   + ++
Sbjct: 107 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 166

Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
            EA  +F  M   G  P++++YN L++GYCK   +  A + ++EM+H  L P++V++  L
Sbjct: 167 FEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 226

Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
           +DGLC++G LR A + F +M   G  P++  Y+ L+DG CK G L +A  L   M+   +
Sbjct: 227 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 286

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
            P++  YNILI  +C    L+ A  L  +++ +G+  N+
Sbjct: 287 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
            PDV TY  +I GLC +G+   A GL +KM + G   +VVTY+++ID  CK+  + +AL 
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
           + S M  KG+ PN+ T++SLI G C       A  +  EM+  +++P++V F+ LI+   
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
           K+GN+ E   + K M E  + P+V T SSL++G      +  A   F    D      C 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF----DVMITKGCK 182

Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
           P+   Y  +I   C   +I +A +LF++M    L PD  +Y T++ GL +  R+ +   L
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242

Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
             +M+  G +PD     +++ G+ + G L  AFR
Sbjct: 243 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 276



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 4/243 (1%)

Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
           M   G   +V TY ++I+G CK G+   A  +  +M E G +P+VVT+S++ID  CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
           ++ A+ +++ M  K + P++  + +LI GL      +E   +  EM+   I P++ T S 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
           LI+   K G +  A       T+        PN V Y++++       ++ +A KLF  M
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMG----VEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
            +   +PD  +Y  ++ G  +AKR+ +   L  +MI  G+ PD V    ++ G  + G L
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 560 KSA 562
           + A
Sbjct: 237 REA 239


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.139    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,961,215,138
Number of Sequences: 23463169
Number of extensions: 362903398
Number of successful extensions: 1122366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9544
Number of HSP's successfully gapped in prelim test: 3577
Number of HSP's that attempted gapping in prelim test: 806586
Number of HSP's gapped (non-prelim): 89975
length of query: 605
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 456
effective length of database: 8,863,183,186
effective search space: 4041611532816
effective search space used: 4041611532816
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)